ID:

dmo_261

 Coordinate:

scaffold_6540:11894856-11894920 -

 Confidence:

confident

 Class:

Canonical miRNA

 Genomic Locale:

intergenic

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-51.4 -50.5 -50.5

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

GCACGACGCAGAAGAACAACAAAACGGCATTGCAGTCACGCTGTCGCTGTCGCTACCGCAGCTGCAGTCAGCGCTGGCAGCGCTGCCTGTGCTGGCTGCCAGTTGCCGTATGCTTTCAGCTGCAACGGCCAACGTCGGCAGTCGTCAGTTTTAATTTCCACATCG

***********************************...((.(((.((((..(((((.(((((((((((((((((.((((....)))).)))))))))).))))))).))).))...)))).))).))..************************************ 		Read size # Mismatch Hit Count Total Norm Total M046

female body

 V056

head

 V049

head

 V110

male body		 V041

embryo
..................................................CGCTACCGCAGCTGCAGTCAG.............................................................................................. 21 0 1 17.00 17 17 0 0 0 0
..................................................CGCTACCGCAGCTGCAGTCA............................................................................................... 20 0 1 16.00 16 13 1 1 1 0
..................................................CGCTACCGCAGCTGCAGTCAGC............................................................................................. 22 0 1 14.00 14 14 0 0 0 0
............................................................................................TGGCTGCCAGTTGCCGTATGCT................................................... 22 0 1 10.00 10 10 0 0 0 0
............................................................................................TGGCTGCCAGTTGCCGTATG..................................................... 20 0 1 9.00 9 6 2 0 1 0
............................................................................................TGGCTGCCAGTTGCCGTATGCTT.................................................. 23 0 1 8.00 8 8 0 0 0 0
............................................................................................TGGCTGCCAGTTGCCGTATGC.................................................... 21 0 1 6.00 6 5 0 1 0 0
............................................................................................TGGCTGCCAGTTGCCGTATGCTTT................................................. 24 0 1 6.00 6 6 0 0 0 0
..................................................CGCTACCGCAGCTGCAGTC................................................................................................ 19 0 1 5.00 5 4 1 0 0 0
..................................................CGCTACCGCAGCTGCAGTCAGCG............................................................................................ 23 0 1 3.00 3 3 0 0 0 0
..................................................CGCTACCGCAGCTGCAGTCAGCGCT.......................................................................................... 25 0 1 2.00 2 2 0 0 0 0
...........................................................................................CTGGCTGCCAGTTGCCGTATGC.................................................... 22 0 1 2.00 2 2 0 0 0 0
............................................................................................TGGCTGCCAGTTGCCGTATGCTTA................................................. 24 1 1 2.00 2 1 1 0 0 0
...........................................................................................CTGGCTGCCAGTTGCCGTATGCTAA................................................. 25 2 1 1.00 1 1 0 0 0 0
...................................................GCTACCGCAGCTGCAGTCAGC............................................................................................. 21 0 1 1.00 1 1 0 0 0 0
......................................................................................................................GCTGCAACGGCCAACGTCGGCAGTC...................... 25 0 1 1.00 1 1 0 0 0 0
..................................................CGCTACCGCAGGTGCAGTC................................................................................................ 19 1 1 1.00 1 1 0 0 0 0
............................................................................................TGGCTGCCAGTTGCCGTAT...................................................... 19 0 1 1.00 1 1 0 0 0 0
..........................................................CGGCTGCAGTCGGCGCTGGCA...................................................................................... 21 2 1 1.00 1 1 0 0 0 0
.............................................................................................GGCTGCCAGTTGCCGTATGCTTA................................................. 23 1 1 1.00 1 1 0 0 0 0
.............GAACAACAAAACGGCATTGCA................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
..................................................CGCTACCGCAGCTGCAGTCAGCGCTGG........................................................................................ 27 0 1 1.00 1 1 0 0 0 0
.......................................................................................TGTGCTGGCTGCCAGTTGCCG......................................................... 21 0 1 1.00 1 0 1 0 0 0
..................................................CGCTACCGCAGCTGCAGTCAGCGCTGGC....................................................................................... 28 0 1 1.00 1 1 0 0 0 0
..................................................CGCTACCGCAGCTGCAGTCAGT............................................................................................. 22 1 1 1.00 1 1 0 0 0 0
.................................................TCGCTACCGCAGCTGCAGTC................................................................................................ 20 0 1 1.00 1 0 1 0 0 0
...........................................................................................CTGGCTGCCAGTTGCCGTATG..................................................... 21 0 1 1.00 1 0 1 0 0 0
..................................................CGCTACCGCAGATGCAGTCAG.............................................................................................. 21 1 1 1.00 1 1 0 0 0 0
.............................................................................................GGCTGCCAGTTGCCGTATGCTT.................................................. 22 0 1 1.00 1 1 0 0 0 0
..................................................CGCTACCGCAGGTGCAGTCA............................................................................................... 20 1 1 1.00 1 1 0 0 0 0
.......................................................................................TGTGCTGGCTGCCAGTTGC........................................................... 19 0 1 1.00 1 1 0 0 0 0
.....................................................TACCGCAGCTGCAGTCAGCGCT.......................................................................................... 22 0 1 1.00 1 1 0 0 0 0
...........................................................................................CTGGCTGCCAGTTGCCGTATGCTTT................................................. 25 0 1 1.00 1 1 0 0 0 0
...........................................................................................CTGGCTGCCAGTTGCCGTATGCTT.................................................. 24 0 1 1.00 1 1 0 0 0 0
............................................................................................TGGCTGCCAGTTGCCTTATGC.................................................... 21 1 1 1.00 1 1 0 0 0 0
..................................................CGCTACCGCAGCTGCAGTCT............................................................................................... 20 1 2 0.50 1 1 0 0 0 0
............................................................................................TGGCTGCCAGTTGCCGTGTT..................................................... 20 2 5 0.20 1 0 0 1 0 0
........................GGGCATTGTAGTCACGTTGTC........................................................................................................................ 21 3 5 0.20 1 0 0 0 0 1
........................GGGCATTGCAGTCACATTGT......................................................................................................................... 20 3 13 0.08 1 0 1 0 0 0
........................GGGCATTGCAGTCACTTTGT......................................................................................................................... 20 3 18 0.06 1 0 1 0 0 0

Anti-sense strand reads

CGTGCTGCGTCTTCTTGTTGTTTTGCCGTAACGTCAGTGCGACAGCGACAGCGATGGCGTCGACGTCAGTCGCGACCGTCGCGACGGACACGACCGACGGTCAACGGCATACGAAAGTCGACGTTGCCGGTTGCAGCCGTCAGCAGTCAAAATTAAAGGTGTAGC

************************************...((.(((.((((..(((((.(((((((((((((((((.((((....)))).)))))))))).))))))).))).))...)))).))).))..*********************************** 		Read size # Mismatch Hit Count Total Norm Total V056

head

 V110

male body
.........................................ACAGCGACAGCGATGGCGTC........................................................................................................ 20 0 1 1.00 1 1 0
..............................................................AGGACAGTCGCGACCGTCGAG.................................................................................. 21 3 11 0.09 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droMoj3 scaffold_6540:11894806-11894970 - dmo_261 confident GCACGACGCAG-----A-AGAACA-ACA-A----AAC-----------------------------------------------------------------------------------------GGCATTGCAGTCA-CGCTGTCGC-----------TGTCGC------TACCGCAGCTGC------------------------AGT-----------------CAGC--GCTGGCAGCGCTGCCTGTG------------------------------------CTG----------------G------------------------------------------------------------------------CT-------------GCCAGT--------------T--GC-CGT-----ATGCTT-------------------TCAGCTGCAACGGCCA----------AC-GTCGGCAGT-CGTCAGTTTTAAT-TTCCACA---TC--G
droVir3 scaffold_12855:2693642-2693822 - dvi_106 confident GAACAACG------AGA-ACAACA-GCAATT-----------------------------------------------------------------------------------------------ACCATTGCATTCGCAGTCGCTGTCGC--T---GTCG---CAGTCG------CAGCTGCAGTTGACGTCGACAGCG-----CTTGCGG-----------------------------CGCTGCC--------------------------------------CGTTG----------------G------------------------------------------------------------------------CT-------------GCCAGC--------------T--GC-CGT-----CTGCTT-------------------TCAGCTGCAACGGCCAACGTCGT----CAG-TCGCCAGTCGTCAGTTTTAAT-TTCCACA---TC--G
droGri2 scaffold_3013:1634-1800 - GCAGCG----G--CAGCAGC-AG---CAG----------CAGCAG---CGGCAGCAGTAGCAGCAGCAGCGGCAGC-------------------------------------------------------AGCAGC--------------------------------AG------CAGCAGC----------GGCAGCG-----GCAGCAGCAGCA------G-CG------------------------GCAGCAGCAGC--------------------------------------------------------------------------------------------------------------------AGCA-------------GC-AGCAGCAGCAGCG-------------------------------------------------GCAGCG-GCAGCAGCAG----C-AGC-GGCAG-CGGCAGCGGCAGC-ATCAGCA---TC---
droWil2 scf2_1100000004902:11175878-11176072 - dwi_5427 ACATAACA------AAA-GG-AAA-ATAAAAAGAAAT-------G---AAAAGAAAAACTTAAAAACTGC-ACAGTTGCAGTC--------------------------------ATGCTGCTGCCTCTGCTGCAGTTGACGTCGACTT--------------------------------------------------CG-----GTTGCTGCTGCT------G-GT------------------------GCTGGTGC--------------------------------------------------------------------------------------------------------------------TGCTGCT-------------GC-AGTTGCTGTTGGC-------------------------------------------------GTTTTG-GCATTTGGTT--TGG-TCTGGCCAC-AGTCAGTGTTAAT-TTCCTCA---TC--G
dp5 2:5026843-5026999 - dps_117 candidate-rescued ACACGCTGC---------------------A---GTC-----------------------------------------------------------------------------------------GCTGCTGCAGTCGACGCTGGCGT-----------CGTCGC------CG------------------------TCGCCTTCTCTGCC------GCTGACGC--TGCCGC-----------------------------------TGACGATGTGAGGCCAGCCGCTG----------------G------------------------------------------------------------------------CT-------------GC-GGC-----------CGCT--GT-CGG-----CTGCTTGCCTG----------------------------------------CA-CCCGGTCAG-CGTCAGTGTTCAT-TTCCCCA---TC--G
droPer2 scaffold_19:732305-732461 - dpe_2527 ACACGCTGC---------------------A---GTC-----------------------------------------------------------------------------------------GCTGCTGCAGTCGACGCTGGCGT-----------CGTCGC------CG------------------------TCGCCTTCTCTGCC------GCTGCCGC--TGACGC-----------------------------------TGACGATGTGAGGCCAGCCGCTG----------------G------------------------------------------------------------------------CT-------------GC-GGC-----------CGCT--GT-CGG-----CTGCTTGCCTG----------------------------------------CA-CCCGGTCAG-CGTCAGTGTTCAT-TTCCCCA---TC--G
droAna3 scaffold_13340:6482827-6483013 + dan_4066 AAACGC---------------------CAAA---AAC-------AAACT----------------------------GCAGTCTGCTGC----------------------------------GTCGCTACTGCAGTCGTCGACGACGTCGA--TGTG---G---CTGCCGCTGCCACCGCTGC------------------TGTT------------------G-CC------------------------ACTGCTGCTGCTGCTGCTGCTGCTGCAGAGCCTTCTGCTG-----------------------------------------------------------------------------------------CT-------------TT-GGT-----------TGCT--GT-TGGCCA---------ATTG----------------------------------------CC-GTTGGCCAG-CGTCAGTGTTCAT-TTTCCCA---TC--G
droBip1 scf7180000396708:2366170-2366342 - CCATAACGAAG--AAGA-AGAAAACGCCAAA---AAC-------AAACT----------------------------GCAGTCGGCTGC-------------------------------------GTCGCTGCAGTCGACGACGCCG--------------------------------------------------ACG-----TCTGCTG------CTACGGG--TACTGC-----------------------------------TGCCGCTGCAGCGCCTTCTGCTG-----------------------------------------------------------------------------------------CT-------------TT-GGT-----------TGCT--GT-TGGCCA---------ATTG----------------------------------------CC-GTTGGCCAG-CGTCAGTGTTCAT-TTTCCCA---TC--G
droKik1 scf7180000302698:592427-592570 + GCAGCA----G--CACA-ACAACA-ACA-------AC-----------------------------------------------------------------------------------------AACGTTGCAGTCGCAGTCGCAGC-----AGAAGTCGCAGC---AG------CAGCAGC--------------------------------------------------AGTA-----------------GCAGCGCC--------------------------------------------------------------------------------------------------------------------AGCA-------------CC-AGCAGCAG-------------------------------------------------CAGCAGCAACG-CCAGCATAGGCAGC--G-ACGCCAG-CAGCAG----CAT-GTCCAAA---AC--A
droFic1 scf7180000454072:3124495-3124653 + GCGGCA----A--CAGCAAC-AA---CAA----------CAACGG---CATTGGCAGTGGCAGCGGCAGCGGCAAT--------------------------AT-----------------------------CAGC--------------------------------AG------CAGCTGC----------ATCAACG-----GCAGCAGCGGCA------A-CC------------------------ACTGCAGCATC--------------------------------------------------------------------------------------------------------------------AGCG-------------GC-AGCAGCAGCAACA-------------------------------------------------GCAACG-GCAGCAGT---------------GG-TGGCAGTGGCAAC-AGCAGCA---AC--G
droEle1 scf7180000490751:1099816-1099998 - GCTCGACACAG--CAGCAA-------CAA-------CAGCAACAG---CAACAGCAACAGCAGCAGCAGCAACAACAGCAGCA--------------------------------ATCCGCCAGCAACGGCGGCG------------GC---ACATCC----------------------------------------------------------------------------------------------ACCTCGGCG------------------------------------------------------------------------------------------------------------------------------------------GC-----------CTTGT--CCCTAGCCCATCCGCACGCCCACAGCAGTCACGCCCTCAGCAGCCAC----------------------GCC----CACAGCAGTCAC-GTCCACGCCCTA--G
droRho1 scf7180000779488:520569-520733 - GCTTGATTCGCAGCAGCAG-------CT-------GCAGCAACAC---GGTCACCAATGTCA-CGACATTG----------------------GCGCAGATTAT-----------------------------GAG-----------------------------C---AA------CAGCAGC--------------------------------------------------ACGAGCAGCGCCTCC--------------------------------------AGTTT---------------------------------------------------------------------------------------------ACTC----------AG-------------------------------------------CCAGCACAACAACAACAGCAACTG-CAGCAACAG--------C-AGCAA-CTTCAGTACCGCC-TCCTCCG---TC--G
droBia1 scf7180000298389:980158-980333 + CCCAGGCGCAG-----A-CGGCCA--CGCAG-------ACCATCGAAAT----------------------------ACCCACGGCCACGCTGCTGCAGGCCACCACCGCCAGCCAGGTGCAATCGCAGGTGGTG------------GC-----AGCC----------------------------------------------------------------------------------------------GCCGCGGCAG-----------------------------------------------------------------------------------------------------------------------CC--GCCC----------AG-------------------------------------------CAGCTGCAAGTCCAGCAGCAACAG-CAGCAG-----------CAGC-AT-CACC-ATGTACAA-ACCACCC---AGATC
droTak1 scf7180000415245:186297-186423 - GCAGAACG--------A-AGAAAA-GCCAAA---AAC-----------------------------------------------------------------------------------------GCAGCTGCAGTCGCCGTCGACGT-----------CG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGTCGCTGCACTTGGCGACGTC-CG-----------TTTTTCAGT-TGGCCA---------ATTG----------------------------------------CC-GTTGGCCAG-CTTCAGTGTTCAT-TTCCCCA---TC--G
droEug1 scf7180000409470:253078-253208 + ACAAGAAG--------A-AGTAAA-GCCAAAAGAAAC-----------------------------------------------------------------------------------------GCAGCTGCAGTCGACGTCGCTG--------------------------------------------------------------------------------------------------------------------------------------CCAGCTGCTC----------------------------------------------------------------------------------------GCTGCAATCGCCGACATT-CG-----------TTTCT--GTTTGGCCA---------ATTG----------------------------------------CC-GTTGGCCAG-CTTCAGTGTTCAT-TTCCCCA---TC--G
dm3 chrX:10813996-10814161 + GCAGCA----G--CAACAGC-AGC-AGCAGC---AGC-----------------------------------------------------------------------------------------GC---TTGATGCAGGGACACTATC--------------------------------------------------------------------------------------------------------------------------------------------AA----------------T---------TTGGACCGGATGGCGGAATGCCAGGATTCAGCGAGCGCGGAGTGCCCGAAGGAGCGGCCGCCGTATCGCAC----------AG-------------------------------------------CGATTGCAATG--------------------------CC-ATGG--TGT-CGCCAACTTCAGC-AGCAGCA---GC--G
droSim2 3r:15128611-15128753 - dsi_31064 confident ATACCA----G--AAGA-AGCAAA-GCCAAA---AAC-----------------------------------------------------------------------------------------GCAGCTGCAGTCGACGTCGACGC-----AGTG------------------------------------------------TTCGCTG------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCCACCGCTGCTGCACTCGCCGACGTC-CG-----------TTTCT--GTTTGGCCC---------ATTG----------------------------------------CC-GTTGGCCAG-CTTCAGTGTTCAT-TTCCCCA---TC--G
droSec2 scaffold_0:15993590-15993732 - dse_332 confident ATACCA----G--AAGA-AGCAAA-GCCAAA---AAC-----------------------------------------------------------------------------------------GCAGCTGCAGTCGACGTCGACGC-----AGTG------------------------------------------------TTCGCTG------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCCACCGCTGCTGCACTCGCCGACGTC-AG-----------TTTCT--GTTTGGCCC---------ATTG----------------------------------------CC-GTTGGCCAG-CTTCAGTGTTCAT-TTCCCCA---TC--G
droYak3 3R:9967346-9967503 + dya_1810 ATACCA----G--AAGA-AGCAAA-GCCAAA---AAC-----------------------------------------------------------------------------------------GCAGCTGCAGTCGACGTCGACGC-----------TACTGC------TG------------------------CTGCTGCTGCCGTT------GCTGCTG---------------------------------------------------------------------------------------------------------------------------------------------------CCACCGCTGCTGCATTCGCCGACGTC-CG-----------TTTCT--GTTTGGCCC---------ATTG----------------------------------------CC-GTTGGCCAG-CTTCAGTGTTCAT-TTCCCCA---TC--G
droEre2 scaffold_4929:9419355-9419512 + TCATGAAGCGG-----G-AGTACA-GCTC--------------TG---CA----------------------------------------------------------------------------GCGGCGGCGGC-----------------A---GCAG---C------------------------------------------AGCAG------CAGCGGC--AGCAGC-----------------------------------CGCCG--------GCGGCGGCGAGCTGAATCACCTGATGAACATGTACC-------------------------------------------------------------ATCT-------------GC-CTGATGAGCAGCG-------------------------------------------------CCACCT-G-----------------CTGC-AC-TACCAGACTGACTCGCCCGAT---CT--G

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
GCACGACGCAG-----A-AGAACA-ACA-A----AAC-----------------------------------------------------------------------------------------GGCATTGCAGTCA-CGCTGTCGC-----------TGTCGC------TACCGCAGCTGC------------------------AGT-----------------CAGC--GCTGGCAGCGCTGCCTGTG------------------------------------CTG----------------G------------------------------------------------------------------------CT-------------GCCAGT--------------T--GC-CGT-----ATGCTT-------------------TCAGCTGCAACGGCCA----------AC-GTCGGCAGT-CGTCAGTTTTAAT-TTCCACA---TC--GSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
...................................................................................................................................................................CGC------TACCGCAGCTGC------------------------AGT-----------------CAG....................................................................................................................................................................................................................................................................................................21117.00171700000
...................................................................................................................................................................CGC------TACCGCAGCTGC------------------------AGT-----------------CA.....................................................................................................................................................................................................................................................................................................20116.00161301101
...................................................................................................................................................................CGC------TACCGCAGCTGC------------------------AGT-----------------CAGC--.................................................................................................................................................................................................................................................................................................22114.00141400000
..................................................................................................................................................................................................................................................................................................TG----------------G------------------------------------------------------------------------CT-------------GCCAGT--------------T--GC-CGT-----ATGCT........................................................................................22110.00101000000
..................................................................................................................................................................................................................................................................................................TG----------------G------------------------------------------------------------------------CT-------------GCCAGT--------------T--GC-CGT-----ATG..........................................................................................2019.009600201
..................................................................................................................................................................................................................................................................................................TG----------------G------------------------------------------------------------------------CT-------------GCCAGT--------------T--GC-CGT-----ATGCTT-------------------....................................................................2318.008800000
..................................................................................................................................................................................................................................................................................................TG----------------G------------------------------------------------------------------------CT-------------GCCAGT--------------T--GC-CGT-----ATGC.........................................................................................2116.006501000
..................................................................................................................................................................................................................................................................................................TG----------------G------------------------------------------------------------------------CT-------------GCCAGT--------------T--GC-CGT-----ATGCTT-------------------T...................................................................2416.006600000
...................................................................................................................................................................CGC------TACCGCAGCTGC------------------------AGT-----------------C......................................................................................................................................................................................................................................................................................................1915.005400100
...................................................................................................................................................................CGC------TACCGCAGCTGC------------------------AGT-----------------CAGC--G................................................................................................................................................................................................................................................................................................2313.003300000
...................................................................................................................................................................CGC------TACCGCAGCTGC------------------------AGT-----------------CAGC--GCT..............................................................................................................................................................................................................................................................................................2512.002200000
.................................................................................................................................................................................................................................................................................................CTG----------------G------------------------------------------------------------------------CT-------------GCCAGT--------------T--GC-CGT-----ATGC.........................................................................................2212.002200000
..................................................................................................................................................................................................................................................................................................TG----------------G------------------------------------------------------------------------CT-------------GCCAGT--------------T--GC-CGT-----ATGCTT-------------------A...................................................................2412.002100100
.................................................................................................................................................................................................................................................................................................CTG----------------G------------------------------------------------------------------------CT-------------GCCAGT--------------T--GC-CGT-----ATGCTA-------------------A...................................................................2511.001100000
....................................................................................................................................................................GC------TACCGCAGCTGC------------------------AGT-----------------CAGC--.................................................................................................................................................................................................................................................................................................2111.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCAACGGCCA----------AC-GTCGGCAGT-C............................2511.001100000
..................................................................................................................................................................................................................................................................................................TG----------------G------------------------------------------------------------------------CT-------------GCCAGT--------------T--GC-CGT-----AT...........................................................................................1911.001100000
...................................................................................................................................................................................................................................................................................................G----------------G------------------------------------------------------------------------CT-------------GCCAGT--------------T--GC-CGT-----ATGCTT-------------------A...................................................................2311.001100000
...................GAACA-ACA-A----AAC-----------------------------------------------------------------------------------------GGCATTGCA....................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...................................................................................................................................................................CGC------TACCGCAGCTGC------------------------AGT-----------------CAGC--GCTGG............................................................................................................................................................................................................................................................................................2711.001100000
.........................................................................................................................................................................................................................................................TGTG------------------------------------CTG----------------G------------------------------------------------------------------------CT-------------GCCAGT--------------T--GC-CG...................................................................................................2111.001000100
...................................................................................................................................................................CGC------TACCGCAGCTGC------------------------AGT-----------------CAGC--GCTGGC...........................................................................................................................................................................................................................................................................................2811.001100000
...................................................................................................................................................................CGC------TACCGCAGCTGC------------------------AGT-----------------CAGT--.................................................................................................................................................................................................................................................................................................2211.001100000
..................................................................................................................................................................TCGC------TACCGCAGCTGC------------------------AGT-----------------C......................................................................................................................................................................................................................................................................................................2011.001000100
.................................................................................................................................................................................................................................................................................................CTG----------------G------------------------------------------------------------------------CT-------------GCCAGT--------------T--GC-CGT-----ATG..........................................................................................2111.001000100
...................................................................................................................................................................................................................................................................................................G----------------G------------------------------------------------------------------------CT-------------GCCAGT--------------T--GC-CGT-----ATGCTT-------------------....................................................................2211.001100000
.........................................................................................................................................................................................................................................................TGTG------------------------------------CTG----------------G------------------------------------------------------------------------CT-------------GCCAGT--------------T--GC-.....................................................................................................1911.001100000
............................................................................................................................................................................TACCGCAGCTGC------------------------AGT-----------------CAGC--GCT..............................................................................................................................................................................................................................................................................................2211.001100000
.................................................................................................................................................................................................................................................................................................CTG----------------G------------------------------------------------------------------------CT-------------GCCAGT--------------T--GC-CGT-----ATGCTT-------------------T...................................................................2511.001100000
.................................................................................................................................................................................................................................................................................................CTG----------------G------------------------------------------------------------------------CT-------------GCCAGT--------------T--GC-CGT-----ATGCTT-------------------....................................................................2411.001100000
...................................................................................................................................................................CGC------TACCGCAGCTGC------------------------AGT-----------------CT.....................................................................................................................................................................................................................................................................................................2020.501100000
droVir3
GAACAACG------AGA-ACAACA-GCAATT-----------------------------------------------------------------------------------------------ACCATTGCATTCGCAGTCGCTGTCGC--T---GTCG---CAGTCG------CAGCTGCAGTTGACGTCGACAGCG-----CTTGCGG-----------------------------CGCTGCC--------------------------------------CGTTG----------------G------------------------------------------------------------------------CT-------------GCCAGC--------------T--GC-CGT-----CTGCTT-------------------TCAGCTGCAACGGCCAACGTCGT----CAG-TCGCCAGTCGTCAGTTTTAAT-TTCCACA---TC--GSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
..................................................................................................................................................................................AGCTGCAGTTGACGTCGACAGC...................................................................................................................................................................................................................................................................................................................................22151.005110400100000000011001000300000000000000000000000000000000000002100000096022800000
....................................................................................................................................................................................................................................................CTGCC--------------------------------------CGTTG----------------G------------------------------------------------------------------------CT-------------GCCAGC--------------T--GC-.....................................................................................................22134.00343100000100000034000000200010020000000000000000000000000000001100000062112300000
..................................................................................................................................................................................AGCTGCAGTTGACGTCGACAGCG-----C............................................................................................................................................................................................................................................................................................................................24129.00291110000000000000000010900000000000000001000000000000000000002000000053111200000
..................................................................................................................................................................................AGCTGCAGTTGACGTCGACAGCG-----.............................................................................................................................................................................................................................................................................................................................23121.00211100032000000001000000710000000000000000000000000000000000000000000001012100000
....................................................................................................................................................................................................................................................CTGCC--------------------------------------CGTTG----------------G------------------------------------------------------------------------CT-------------GCCAGC--------------T--........................................................................................................20118.00181140000000000021000004300000000000000000000000000000000000000000000010001000000
....................................................................................................................................................................................................................................................CTGCC--------------------------------------CGTTG----------------G------------------------------------------------------------------------CT-------------GCCAGC--------------T--G.......................................................................................................21111.00113010000000000010000001200000000000000000000000000000000000000000000011001000000
....................................................................................................................................................................................................................................................CTGCC--------------------------------------CGTTG----------------G------------------------------------------------------------------------CT-------------GCCAGC--------------T--GA-.....................................................................................................2218.0081010000000000023000000100000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................AGCTGCAGTTGACGTCGACAG....................................................................................................................................................................................................................................................................................................................................2118.0083110000000000000000000100000010000000000000000000000000000000000000000010000000
...................................................................................................................................................................................................................................................GCTGCC--------------------------------------CGTTG----------------G------------------------------------------------------------------------CT-------------GCCAGC--------------T--GC-.....................................................................................................2317.0070040000000000000000000000000000000000000000000000000000000000000000001000200000
....................................................................................................................................................................................................................................................CTGCC--------------------------------------CGTTG----------------G------------------------------------------------------------------------CT-------------GCCAGC--------------T--GT-.....................................................................................................2217.0070000000000000001001000200100000000000000000000000000000000000100000000000100000
...................................................................................................................................................................................................................................................GCTGCC--------------------------------------CGTTG----------------G------------------------------------------------------------------------CT-------------GCCAGC--------------T--GT-.....................................................................................................2316.0060000000000000030000001100000000100000000000000000000000000000000000000000000000
..................................................................................................................................................................................AGCTGCAGTTGACGTCGACA.....................................................................................................................................................................................................................................................................................................................................2016.0061000000000000001000000100000000000000000000000000000000000000100000000101000000
....................................................................................................................................................................................................................................................CTGCC--------------------------------------CGTTG----------------G------------------------------------------------------------------------CT-------------GCCAGC--------------T--GC-T....................................................................................................2314.0041000000000000011000000000000000000000000000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................CC--------------------------------------CGTTG----------------G------------------------------------------------------------------------CT-------------GCCAGC--------------T--GC-CG...................................................................................................2114.0041100000000000001000000100000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................CC--------------------------------------CGTTG----------------G------------------------------------------------------------------------CT-------------GCCAGC--------------T--G.......................................................................................................1814.0041000000000000000000000000000000000000000000000000000000000000000000030000000000
...................................................................................................................................................................................GCTGCAGTTGACGTCGACAGCG-----C............................................................................................................................................................................................................................................................................................................................2313.0030010000000000000000000100000000000000000000000000000000000000000000001000000000
....................................................................................................................................................................................CTGCAGTTGACGTCGACAGCG-----C............................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000020000000000
..................................................................................................................................................................................AGCTGCAGTTGACGTCGAC......................................................................................................................................................................................................................................................................................................................................1912.0020010000000000010000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCAACGTCGT----CAG-TCGC.................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000200000000
...................................................................................................................................................................................GCTGCAGTTGACGTCGACAGC...................................................................................................................................................................................................................................................................................................................................2112.0022000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................G-----------------------------CGCTGCC--------------------------------------CGTTG----------------G------------------------------------------------------------------------CT-------------GCCAGC--------------T--GC-C....................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000001000100000
.......................................................................................................................................................................................................................................................CC--------------------------------------CGTTG----------------G------------------------------------------------------------------------CT-------------GCCAGC--------------T--GC-CGT-----.............................................................................................2212.0020000000000000000000000000000000000000001000000000000000000000000000000000100000
..................................................................................................................................................................................AGCTGCAGTTGACGTCGACAGA...................................................................................................................................................................................................................................................................................................................................2212.0020010000000000000000000000000000000000000000000000000000000000100000000000000000
....................................................................................................................................................................................................................................................CTGCC--------------------------------------CGTTG----------------G------------------------------------------------------------------------CT-------------GCCAGC--------------T--GT-T....................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000002000000000
....................................................................................................................................................................................................................G-----------------------------CGCTGCC--------------------------------------CGTTG----------------G------------------------------------------------------------------------CT-------------GC.............................................................................................................................1821.5030000000000000000000000000000000000000000000000000000000000000000000000030000000
................................................................................................................................................................CG---CAGTCG------CAGCTGCAGTTGACGTCGAC......................................................................................................................................................................................................................................................................................................................................2811.0011000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................AGTTGACGTCGACAGCG-----CT...........................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGCCAACGTCGT----CAG-TCGCCAGTC............................2711.0010000000000000000000000000100000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TT-------------------TCAGCTGCAACGGCCAACGTCGT----CA.......................................2711.0010000000000000000000000010000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................T--GC-CGT-----CTGCTT-------------------TCAGCTGC............................................................2011.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
.........................................................................................................................................................................CG------CAGCTGCAGTTGACGTCGACAGCG-----C............................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000001000000
...................................................................................................................................................................................GCTGCAGTTGACGTCGACAGCG-----CT...........................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000001000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................GCTGCC--------------------------------------CGTTG----------------G------------------------------------------------------------------------CT-------------GCCAGC--------------T--GG-.....................................................................................................2311.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................CTGCC--------------------------------------CGTTG----------------G------------------------------------------------------------------------CT-------------GCCAGC--------------T--GC-C....................................................................................................2311.0010100000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................AGCTGCAGTTGACGTCGACAGCG-----CT...........................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000100000000
.....................................................................................................................................................................................................................................................TGCC--------------------------------------CGTTG----------------G------------------------------------------------------------------------CT-------------GCCAGC--------------T--GC-CGT-----CT...........................................................................................2611.0010000000000000000000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................CTGCC--------------------------------------CGTTG----------------G------------------------------------------------------------------------CT-------------GCCAGC--------------T--GA-A....................................................................................................2311.0010000000000000000000000000100000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................GTCG------CAGCTGCAGTTGACGTCGACA.....................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................................................................................................................................CTGCC--------------------------------------CGTTG----------------G------------------------------------------------------------------------CT-------------GCCAGC--------------...........................................................................................................1911.0010100000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................CG---CAGTCG------CAGCTGCAGTTGACGT..........................................................................................................................................................................................................................................................................................................................................2411.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................GCTGCC--------------------------------------CGTTG----------------G------------------------------------------------------------------------CT-------------GCCAGC--------------T--GC-T....................................................................................................2411.0010000000000000001000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................CTGCC--------------------------------------CGTTG----------------G------------------------------------------------------------------------CT-------------GCCAGC--------------T--GC-TT...................................................................................................2411.0010000000000000000000001000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................TGCC--------------------------------------CGTTG----------------G------------------------------------------------------------------------CT-------------GCCAGC--------------T--........................................................................................................1911.0011000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................C--------------------------------------CGTTG----------------G------------------------------------------------------------------------CT-------------GCCAGC--------------T--GC-CGT-----.............................................................................................2111.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................GCTGCAGTTGACGTCGACAGCG-----.............................................................................................................................................................................................................................................................................................................................2211.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................TCG------CAGCTGCAGTTGACGTCGAC......................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000001000000000000000000
................................................................................................................................................................................................................TGCGG-----------------------------CGCTGCC--------------------------------------CGTTG----------------G------------------------------------------------------------------------CT-------------GC.............................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000010000000
.....................................................................................................................................................................................................................................................TGCC--------------------------------------CGTTG----------------G------------------------------------------------------------------------CT-------------GCCAGC--------------T--GT-.....................................................................................................2111.0010000000000000000000000000010000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................AGCTGCAGTTGACGTCGACAGCC-----.............................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000010000000
....................................................................................................................................................................................................................................................CTGCC--------------------------------------CGTTG----------------G------------------------------------------------------------------------CT-------------GCCAGC--------------T--GC-A....................................................................................................2311.0010000000000000000000000100000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................TCG------CAGCTGCAGTTGACGTC.........................................................................................................................................................................................................................................................................................................................................2011.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGGCCAACGTCGT----CAG-TCGCC................................2211.0010000000000000010000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................CG------CAGCTGCAGTTGACGTCGACAG....................................................................................................................................................................................................................................................................................................................................2411.0010001000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................CTGCC--------------------------------------CGTTG----------------G------------------------------------------------------------------------CT-------------GCCAGC--------------T--T.......................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000010000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGTCGT----CAG-TCGCCAGTCGTCAGT......................2611.0010000000000000000000000100000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................GCC--------------------------------------CGTTG----------------G------------------------------------------------------------------------CT-------------GCCAGC--------------T--GC-CG...................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................................................................................................................................................................................................................................................TGCC--------------------------------------CGTTG----------------G------------------------------------------------------------------------CT-------------GCCAGC--------------T--GC-.....................................................................................................2111.0010000000000000010000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................TGCC--------------------------------------CGTTG----------------G------------------------------------------------------------------------CT-------------GCCAGC--------------G--........................................................................................................1920.5011000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................GTCG---CAGTCG------CAGCTGCA..................................................................................................................................................................................................................................................................................................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000010000000
....................................................................................................................................................................................................................................................CTGCC--------------------------------------CGTTG----------------G------------------------------------------------------------------------CT-------------GCCAAA--------------...........................................................................................................19100.1010010000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................TCGCAGTCGCTGTCGC--T---GTC..........................................................................................................................................................................................................................................................................................................................................................................20130.0810000000000000000000000000000000000000000000000000000000000000000000000001000000
................................................................................................................................................GCTGTCGC--T---GTCG---CAGTC.................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................................................................TCGCAGTCGCTGTCGC--T---G............................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000010000000000
...............................................................................................................................................CGCTGTCGC--T---GTCG---CAGT..................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000010000000000000000000000000000000000000000
droGri2
GCAGCG----G--CAGCAGC-AG---CAG----------CAGCAG---CGGCAGCAGTAGCAGCAGCAGCGGCAGC-------------------------------------------------------AGCAGC--------------------------------AG------CAGCAGC----------GGCAGCG-----GCAGCAGCAGCA------G-CG------------------------GCAGCAGCAGC--------------------------------------------------------------------------------------------------------------------AGCA-------------GC-AGCAGCAGCAGCG-------------------------------------------------GCAGCG-GCAGCAGCAG----C-AGC-GGCAG-CGGCAGCGGCAGC-ATCAGCA---TC---SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
....................................................................................................................................GCAGC--------------------------------AG------CAGCAGC----------GGCAGCG-----.............................................................................................................................................................................................................................................................................................................................21200.20440
..........................................................................................................................................................................................................................................................................................................................................................................................................................CG-------------------------------------------------GCAGCG-GCAGCAGCAG----C-A......................................20200.05110
droWil2
ACATAACA------AAA-GG-AAA-ATAAAAAGAAAT-------G---AAAAGAAAAACTTAAAAACTGC-ACAGTTGCAGTC--------------------------------ATGCTGCTGCCTCTGCTGCAGTTGACGTCGACTT--------------------------------------------------CG-----GTTGCTGCTGCT------G-GT------------------------GCTGGTGC--------------------------------------------------------------------------------------------------------------------TGCTGCT-------------GC-AGTTGCTGTTGGC-------------------------------------------------GTTTTG-GCATTTGGTT--TGG-TCTGGCCAC-AGTCAGTGTTAAT-TTCCTCA---TC--GSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
......................................................................................................................................AGTTGACGTCGACTT--------------------------------------------------CG-----GT...........................................................................................................................................................................................................................................................................................................................1911.00100100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTT--TGG-TCTGGCCAC-AGTCAGTGTT...................2611.00100010
.............................................................................................................................CTCTGCTGCAGTTGACGTC...........................................................................................................................................................................................................................................................................................................................................................................................1911.00110000
......................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGC-------------------------------------------------GTTTTG-GCATTTGGTT--TG.........................................2411.00100100
...............................................................................................................................................CGACTT--------------------------------------------------CG-----GTTGCTGCTGCT------...........................................................................................................................................................................................................................................................................................................2011.00100100
.........................................................................................................................................TGACGTCGACTT--------------------------------------------------CG-----GTTGCTGCT....................................................................................................................................................................................................................................................................................................................2311.00101000
dp5
ACACGCTGC---------------------A---GTC-----------------------------------------------------------------------------------------GCTGCTGCAGTCGACGCTGGCGT-----------CGTCGC------CG------------------------TCGCCTTCTCTGCC------GCTGACGC--TGCCGC-----------------------------------TGACGATGTGAGGCCAGCCGCTG----------------G------------------------------------------------------------------------CT-------------GC-GGC-----------CGCT--GT-CGG-----CTGCTTGCCTG----------------------------------------CA-CCCGGTCAG-CGTCAGTGTTCAT-TTCCCCA---TC--GSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
...............................................................................................................................................................................................................................................................................ACGATGTGAGGCCAGCCGCTG----------------.......................................................................................................................................................................................................................2118.0080302021000
...............................................................................................................................................................................................................................................................................ACGATGTGAGGCCAGCCGCT........................................................................................................................................................................................................................................2013.0030100020000
...............................................................................................................................................................................................................................................................................ACGATGTGAGGCCAGCCGC.........................................................................................................................................................................................................................................1913.0030101010000
...............................................................................................................................................................................................................................................................................ACGATGTGAGGCCAGCCG..........................................................................................................................................................................................................................................1812.0020100001000
...............................................................................................................................................................................................................................................................................ACGATGTGAGGCCAGCCGCTG----------------G------------------------------------------------------------------------C.............................................................................................................................................2312.0020110000000
...............................................................................................................................................................................................................................................................................ACGATGTGAGGCCAGCCGCTT----------------.......................................................................................................................................................................................................................2112.0020000020000
......................................................................................................................................................................................................................................................................................................................................................................................................................................CGG-----CTGCTTGCCTG----------------------------------------CA-CCCGGTCA...............................2411.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................GGC-----------CGCT--GT-CGG-----CTGCTTGC.....................................................................................2011.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................T-------------GC-GGC-----------CGCT--GT-CGG-----CTGCTTG......................................................................................2211.0010100000000
.................................................................................................................................................................................................................................................................................GATGTGAGGCCAGCCGCTG----------------G------------------------------------------------------------------------C.............................................................................................................................................2111.0010100000000
...............................................................................................................................................................................................................................................................................ACGATGTGAGGCCAGCCGCTG----------------T------------------------------------------------------------------------..............................................................................................................................................2211.0010000001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................CGCT--GT-CGG-----CTGCTTGCCTG----------------------------------------CA-CCCG...................................2611.0010000100000
..............................A---GTC-----------------------------------------------------------------------------------------GCTGCTGCAGTCGACGCTGGC........................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
...............................................................................................................................................................................................................................................................................ACGATGTGAGGCCAGCCGCTG----------------G------------------------------------------------------------------------..............................................................................................................................................2211.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................T--GT-CGG-----CTGCTTGCCTG----------------------------------------CA-C......................................2011.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................CGG-----CTGCTTGCCTG----------------------------------------CA-CCCGGTC................................2311.0010010000000
...............................................................................................................................................................................................................................................................................ACGATGTGAGGCCAGCCGCTG----------------G------------------------------------------------------------------------CT-------------G..............................................................................................................................2511.0010100000000
................................................................................................................................................................................................................................................................................CGATGTGAGGCCAGCCGTAT----------------.......................................................................................................................................................................................................................2050.2010100000000
droPer2
ACACGCTGC---------------------A---GTC-----------------------------------------------------------------------------------------GCTGCTGCAGTCGACGCTGGCGT-----------CGTCGC------CG------------------------TCGCCTTCTCTGCC------GCTGCCGC--TGACGC-----------------------------------TGACGATGTGAGGCCAGCCGCTG----------------G------------------------------------------------------------------------CT-------------GC-GGC-----------CGCT--GT-CGG-----CTGCTTGCCTG----------------------------------------CA-CCCGGTCAG-CGTCAGTGTTCAT-TTCCCCA---TC--GSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
...................................................................................................................................................................CGC------CG------------------------TCGCCTTCTCTGCC------GCTGCC...........................................................................................................................................................................................................................................................................................................2512.002200000
.................................................................................................................................................................GTCGC------CG------------------------TCGCCTTCTCTGCC------.................................................................................................................................................................................................................................................................................................................2112.002200000
...................................................................................................................................................................................................................................................................................................................................................................................................................................GT-CGG-----CTGCTTGCCTG----------------------------------------CA-CCC....................................2111.001010000
...............................................................................................................................................................................................................................................................................ACGATGTGAGGCCAGCCGC.........................................................................................................................................................................................................................................1911.001000001
.................................................................................................................................................................................................................................................................................GATGTGAGGCCAGCCGCTG----------------T------------------------------------------------------------------------..............................................................................................................................................2011.001000001
...............................................................................................................................................................................................................................................................................ACGATGTGAGGCCAGCCGCTG----------------.......................................................................................................................................................................................................................2111.001000100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCCTG----------------------------------------CA-CCCGGTCAG-CGTCA........................2311.001000010
................................................................................................................................TGCTGCAGTCGACGCTGGC........................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
...............................................................................................................................................................................................................................................................................ACGATGTGAGGCCAGCCGCTG----------------G------------------------------------------------------------------------..............................................................................................................................................2211.001010000
...............................................................................................................................................................................................................................................................................ACGATGTGAGGCCAGCCG..........................................................................................................................................................................................................................................1811.001000010
...............................................................................................................................................................................................................................................................................ACGATGTGAGGCCAGCCGT.........................................................................................................................................................................................................................................1911.001000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCTG----------------------------------------CA-CCCGGTCAG-CGTCA........................2211.001010000
droAna3
AAACGC---------------------CAAA---AAC-------AAACT----------------------------GCAGTCTGCTGC----------------------------------GTCGCTACTGCAGTCGTCGACGACGTCGA--TGTG---G---CTGCCGCTGCCACCGCTGC------------------TGTT------------------G-CC------------------------ACTGCTGCTGCTGCTGCTGCTGCTGCAGAGCCTTCTGCTG-----------------------------------------------------------------------------------------CT-------------TT-GGT-----------TGCT--GT-TGGCCA---------ATTG----------------------------------------CC-GTTGGCCAG-CGTCAGTGTTCAT-TTTCCCA---TC--GSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.............................................................................................................................................GACGACGTCGA--TGTG---G---CTGC..................................................................................................................................................................................................................................................................................................................................................................2011.001000001
.........................................................................................................................................................................................................................................................................................GCCTTCTGCTG-----------------------------------------------------------------------------------------CT-------------TT-GGT-----------TGCT--GT-TG...................................................................................................2611.001001000
............................................................................................................................................CGACGACGTCGA--TGTG---G---CTGC..................................................................................................................................................................................................................................................................................................................................................................2111.001000001
AAACGC---------------------CAAA---AAC-------AAACT----------------------------GCAGTCTGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
..............................................................................................................................................ACGACGTCGA--TGTG---G---CTGCCGCTGCCA..........................................................................................................................................................................................................................................................................................................................................................2711.001100000
...........................................................................................................................................................................................................GTT------------------G-CC------------------------ACTGCTGCTGCTGC.................................................................................................................................................................................................................................................................2040.251010000
droBip1
CCATAACGAAG--AAGA-AGAAAACGCCAAA---AAC-------AAACT----------------------------GCAGTCGGCTGC-------------------------------------GTCGCTGCAGTCGACGACGCCG--------------------------------------------------ACG-----TCTGCTG------CTACGGG--TACTGC-----------------------------------TGCCGCTGCAGCGCCTTCTGCTG-----------------------------------------------------------------------------------------CT-------------TT-GGT-----------TGCT--GT-TGGCCA---------ATTG----------------------------------------CC-GTTGGCCAG-CGTCAGTGTTCAT-TTTCCCA---TC--GSizeHit CountTotal NormTotal
No Reads
droKik1
GCAGCA----G--CACA-ACAACA-ACA-------AC-----------------------------------------------------------------------------------------AACGTTGCAGTCGCAGTCGCAGC-----AGAAGTCGCAGC---AG------CAGCAGC--------------------------------------------------AGTA-----------------GCAGCGCC--------------------------------------------------------------------------------------------------------------------AGCA-------------CC-AGCAGCAG-------------------------------------------------CAGCAGCAACG-CCAGCATAGGCAGC--G-ACGCCAG-CAGCAG----CAT-GTCCAAA---AC--ASizeHit CountTotal NormTotal
No Reads
droFic1
GCGGCA----A--CAGCAAC-AA---CAA----------CAACGG---CATTGGCAGTGGCAGCGGCAGCGGCAAT--------------------------AT-----------------------------CAGC--------------------------------AG------CAGCTGC----------ATCAACG-----GCAGCAGCGGCA------A-CC------------------------ACTGCAGCATC--------------------------------------------------------------------------------------------------------------------AGCG-------------GC-AGCAGCAGCAACA-------------------------------------------------GCAACG-GCAGCAGT---------------GG-TGGCAGTGGCAAC-AGCAGCA---AC--GSizeHit CountTotal NormTotal
No Reads
droEle1
GCTCGACACAG--CAGCAA-------CAA-------CAGCAACAG---CAACAGCAACAGCAGCAGCAGCAACAACAGCAGCA--------------------------------ATCCGCCAGCAACGGCGGCG------------GC---ACATCC----------------------------------------------------------------------------------------------ACCTCGGCG------------------------------------------------------------------------------------------------------------------------------------------GC-----------CTTGT--CCCTAGCCCATCCGCACGCCCACAGCAGTCACGCCCTCAGCAGCCAC----------------------GCC----CACAGCAGTCAC-GTCCACGCCCTA--GSizeHit CountTotal NormTotal
No Reads
droRho1
GCTTGATTCGCAGCAGCAG-------CT-------GCAGCAACAC---GGTCACCAATGTCA-CGACATTG----------------------GCGCAGATTAT-----------------------------GAG-----------------------------C---AA------CAGCAGC--------------------------------------------------ACGAGCAGCGCCTCC--------------------------------------AGTTT---------------------------------------------------------------------------------------------ACTC----------AG-------------------------------------------CCAGCACAACAACAACAGCAACTG-CAGCAACAG--------C-AGCAA-CTTCAGTACCGCC-TCCTCCG---TC--GSizeHit CountTotal NormTotal
No Reads
droBia1
CCCAGGCGCAG-----A-CGGCCA--CGCAG-------ACCATCGAAAT----------------------------ACCCACGGCCACGCTGCTGCAGGCCACCACCGCCAGCCAGGTGCAATCGCAGGTGGTG------------GC-----AGCC----------------------------------------------------------------------------------------------GCCGCGGCAG-----------------------------------------------------------------------------------------------------------------------CC--GCCC----------AG-------------------------------------------CAGCTGCAAGTCCAGCAGCAACAG-CAGCAG-----------CAGC-AT-CACC-ATGTACAA-ACCACCC---AGATCSizeHit CountTotal NormTotal
No Reads
droTak1
GCAGAACG--------A-AGAAAA-GCCAAA---AAC-----------------------------------------------------------------------------------------GCAGCTGCAGTCGCCGTCGACGT-----------CG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCGTCGCTGCACTTGGCGACGTC-CG-----------TTTTTCAGT-TGGCCA---------ATTG----------------------------------------CC-GTTGGCCAG-CTTCAGTGTTCAT-TTCCCCA---TC--GSizeHit CountTotal NormTotal
No Reads
droEug1
ACAAGAAG--------A-AGTAAA-GCCAAAAGAAAC-----------------------------------------------------------------------------------------GCAGCTGCAGTCGACGTCGCTG--------------------------------------------------------------------------------------------------------------------------------------CCAGCTGCTC----------------------------------------------------------------------------------------GCTGCAATCGCCGACATT-CG-----------TTTCT--GTTTGGCCA---------ATTG----------------------------------------CC-GTTGGCCAG-CTTCAGTGTTCAT-TTCCCCA---TC--GSizeHit CountTotal NormTotal
No Reads
dm3
GCAGCA----G--CAACAGC-AGC-AGCAGC---AGC-----------------------------------------------------------------------------------------GC---TTGATGCAGGGACACTATC--------------------------------------------------------------------------------------------------------------------------------------------AA----------------T---------TTGGACCGGATGGCGGAATGCCAGGATTCAGCGAGCGCGGAGTGCCCGAAGGAGCGGCCGCCGTATCGCAC----------AG-------------------------------------------CGATTGCAATG--------------------------CC-ATGG--TGT-CGCCAACTTCAGC-AGCAGCA---GC--GSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
..........................GCAGC---AGC-----------------------------------------------------------------------------------------GC---TTGATGCAGGGACACTA.......................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................TGCCAGGATTCAGCGAGCGCGGAG...................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.................................................................................................................................................................................................................................................................................................................................................................CGCGGAGTGCCCGAAGGAGCGGCAA.................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................TTCAGCGAGCGCGGAGTGCCCGA............................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..............................................................................................................................................................................................................................................................................................................................................................................AAGGAGCGGCCGCCGTATCGCAC----------AG-------------------------------------------C..............................................................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.........................AGCAGC---AGC-----------------------------------------------------------------------------------------GC---TTGATGCAGGGAC...........................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................CACTATC--------------------------------------------------------------------------------------------------------------------------------------------AA----------------T---------TTGGACCGGATGGC...............................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................GAGTGCCCGAAGGAGCGGCCGCCGT.............................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................AGCGCGGAGTGCCCGAAG..........................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................TC--------------------------------------------------------------------------------------------------------------------------------------------AA----------------T---------TTGGACCGGATGGGA..............................................................................................................................................................................................2020.501000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....A----G--CAACAGC-AGC-AGCAGC---.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.306000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CA----G--CAACAGC-AGC-AGCAGC---AG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.255000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000010000000000000000000000100000020000000000000000000000000000
..............AACAGC-AGC-AGCAGC---AGC-----------------------------------------------------------------------------------------GC---........................................................................................................................................................................................................................................................................................................................................................................................................2040.251000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..AGCA----G--CAACAGC-AGC-AGCAGC---A........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.102000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
...GCA----G--CAACAGC-AGC-AGCAGC---AGC-----------------------------------------------------------------------------------------.............................................................................................................................................................................................................................................................................................................................................................................................................23200.102000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
GCAGCA----G--CAACAGC-AGC-AGCAGC---AGC-----------------------------------------------------------------------------------------.............................................................................................................................................................................................................................................................................................................................................................................................................26200.102000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
.....A----G--CAACAGC-AGC-AGCAGC---AGC-----------------------------------------------------------------------------------------G............................................................................................................................................................................................................................................................................................................................................................................................................22100.101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CAGCA----G--CAACAGC-AGC-AGCAGC---A........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CAGCA----G--CAACAGC-AGC-AGCAGC---AGC-----------------------------------------------------------------------------------------.............................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..AGCA----G--CAACAGC-AGC-AGCAGC---.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............CAACAGC-AGC-AGCAGC---AGC-----------------------------------------------------------------------------------------G............................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............ACAGC-AGC-AGCAGC---AGC-----------------------------------------------------------------------------------------.............................................................................................................................................................................................................................................................................................................................................................................................................17200.051000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CAGCA----G--CAACAGC-AGC-AGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CA----G--CAACAGC-AGC-AGCAGC---AGC-----------------------------------------------------------------------------------------.............................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
GCAGCA----G--CAACAGC-AGC-AG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
ATACCA----G--AAGA-AGCAAA-GCCAAA---AAC-----------------------------------------------------------------------------------------GCAGCTGCAGTCGACGTCGACGC-----AGTG------------------------------------------------TTCGCTG------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCCACCGCTGCTGCACTCGCCGACGTC-CG-----------TTTCT--GTTTGGCCC---------ATTG----------------------------------------CC-GTTGGCCAG-CTTCAGTGTTCAT-TTCCCCA---TC--GSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
........................................................................................................................................TCGACGTCGACGC-----AGTG------------------------------------------------TTCGC........................................................................................................................................................................................................................................................................................................................221139.001396176100010000000000
........................................................................................................................................TCGACGTCGACGC-----AGTG------------------------------------------------TTCGCTG------------------------------------------------------------------------------------------------------------------------------------------------------------..........................................................................................................................................................241105.0010534581100011000000000
........................................................................................................................................TCGACGTCGACGC-----AGTG------------------------------------------------TTCGCT.......................................................................................................................................................................................................................................................................................................................23149.00491431000031000000000
...........................................................................................................................................................................................................................................................................................................................................................................................TGCTGCACTCGCCGACGTC-CG-----------...............................................................................................................21120.0020125110000000001000
........................................................................................................................................TCGACGTCGACGC-----AGTG------------------------------------------------TTCG.........................................................................................................................................................................................................................................................................................................................21112.001253020010000001000
.........................................................................................................................................CGACGTCGACGC-----AGTG------------------------------------------------TTCGC........................................................................................................................................................................................................................................................................................................................21110.001064000000000000000
........................................................................................................................................TCGACGTCGACGC-----AGTG------------------------------------------------TTCGCC.......................................................................................................................................................................................................................................................................................................................2318.00834100000000000000
........................................................................................................................................TCGACGTCGACGC-----AGTG------------------------------------------------TTCGCTG------------------------------------------------------------------------------------------------------------------------------------------------------------A.........................................................................................................................................................2518.00825000001000000000
...........................................................................................................................................................................................................................................................................................................................................................................................TGCTGCACTCGCCGACGTC-CG-----------T..............................................................................................................2217.00701000050000100000
........................................................................................................................................TCGACGTCGACGC-----AGTG------------------------------------------------TTC..........................................................................................................................................................................................................................................................................................................................2017.00714010001000000000
.........................................................................................................................................CGACGTCGACGC-----AGTG------------------------------------------------TTCGCT.......................................................................................................................................................................................................................................................................................................................2215.00522000001000000000
........................................................................................................................................TCGACGTCGACGC-----AGTG------------------------------------------------TTCGCTG------------------------------------------------------------------------------------------------------------------------------------------------------------G.........................................................................................................................................................2515.00523000000000000000
........................................................................................................................................TCGACGTCGACGC-----AGTG------------------------------------------------TTCGCTG------------------------------------------------------------------------------------------------------------------------------------------------------------T.........................................................................................................................................................2514.00422000000000000000
........................................................................................................................................TCGACGTCGACGC-----AGTG------------------------------------------------TTCGCG.......................................................................................................................................................................................................................................................................................................................2314.00422000000000000000
........................................................................................................................................TCGACGTCGACGC-----AGTG------------------------------------------------TTCGT........................................................................................................................................................................................................................................................................................................................2213.00303000000000000000
.........................................................................................................................................CGACGTCGACGC-----AGTG------------------------------------------------TTCG.........................................................................................................................................................................................................................................................................................................................2013.00303000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................TGCTGCACTCGCCGACGTC-C...........................................................................................................................2012.00201000100000000000
........................................................................................................................................TCGACGTCGACGC-----AGTG------------------------------------------------TTCGG........................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................CGACGTC-CG-----------TTTCT--GTTTGGCC................................................................................................2211.00110000000000000000
.........................................................................................................................................CGACGTCGACGC-----AGTG------------------------------------------------TTCGCTG------------------------------------------------------------------------------------------------------------------------------------------------------------T.........................................................................................................................................................2411.00110000000000000000
........................................................................................................................................TCGACGTCGACGC-----AGTG------------------------------------------------T............................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
.........................................................................................................................................CGACGTCGACGC-----AGTG------------------------------------------------TTCGCC.......................................................................................................................................................................................................................................................................................................................2211.00101000000000000000
...............................................................................................................................CAGCTGCAGTCGACGTCGACG.......................................................................................................................................................................................................................................................................................................................................................................................2121.00220000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................TGCACTCGCCGACGTC-CG-----------...............................................................................................................1811.00100000100000000000
........................................................................................................................................TCGACGTCGACGC-----AGTG------------------------------------------------TTCGCTG------------------------------------------------------------------------------------------------------------------------------------------------------------C.........................................................................................................................................................2511.00110000000000000000
............................AAA---AAC-----------------------------------------------------------------------------------------GCAGCTGCAGTCGACGTCGACG.......................................................................................................................................................................................................................................................................................................................................................................................2811.00100000001000000000
...................................................................................................................................................................................................................TG------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCCACCGCTGA.............................................................................................................................................15200.7014000000000014000000
.................................................................................................................................................................................................................GCTG------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCCACCGCTGA.............................................................................................................................................17130.46600000000006000000
........................................................................................................................................TCGACGTCGACGC-----AGTG------------------------------------------------G............................................................................................................................................................................................................................................................................................................................1830.33101000000000000000
..................................................................................................................................................................................................................CTG------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCCACCGCTGA.............................................................................................................................................16200.15300000000012000000
droSec2
ATACCA----G--AAGA-AGCAAA-GCCAAA---AAC-----------------------------------------------------------------------------------------GCAGCTGCAGTCGACGTCGACGC-----AGTG------------------------------------------------TTCGCTG------------------------------------------------------------------------------------------------------------------------------------------------------------CTGCCACCGCTGCTGCACTCGCCGACGTC-AG-----------TTTCT--GTTTGGCCC---------ATTG----------------------------------------CC-GTTGGCCAG-CTTCAGTGTTCAT-TTCCCCA---TC--GSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
...........................................................................................................................................................................................................................................................................................................................................................................................TGCTGCACTCGCCGACGTC-AG-----------...............................................................................................................211149.001491769360
........................................................................................................................................TCGACGTCGACGC-----AGTG------------------------------------------------TTCG.........................................................................................................................................................................................................................................................................................................................21163.0063164016
........................................................................................................................................TCGACGTCGACGC-----AGTG------------------------------------------------TTCGA........................................................................................................................................................................................................................................................................................................................22147.004704700
........................................................................................................................................TCGACGTCGACGC-----AGTG------------------------------------------------TTCGC........................................................................................................................................................................................................................................................................................................................22146.0046103114
........................................................................................................................................TCGACGTCGACGC-----AGTG------------------------------------------------TTCGCT.......................................................................................................................................................................................................................................................................................................................23136.0036102303
........................................................................................................................................TCGACGTCGACGC-----AGTG------------------------------------------------TTCGCTG------------------------------------------------------------------------------------------------------------------------------------------------------------..........................................................................................................................................................24129.002931916
...........................................................................................................................................................................................................................................................................................................................................................................................TGCTGCACTCGCCGACGTC-AG-----------T..............................................................................................................22127.002771217
...........................................................................................................................................................................................................................................................................................................................................................................................TGCTGCACTCGCCGACGTC-A...........................................................................................................................20217.0034111805
.........................................................................................................................................CGACGTCGACGC-----AGTG------------------------------------------------TTCGCTG------------------------------------------------------------------------------------------------------------------------------------------------------------C.........................................................................................................................................................24113.00132911
.........................................................................................................................................CGACGTCGACGC-----AGTG------------------------------------------------TTCG.........................................................................................................................................................................................................................................................................................................................20112.00123801
...........................................................................................................................................................................................................................................................................................................................................................................................TGCTGCACTCGCCGACGTC-AG-----------A..............................................................................................................2228.50173806
........................................................................................................................................TCGACGTCGACGC-----AGTG------------------------------------------------TTCGCTG------------------------------------------------------------------------------------------------------------------------------------------------------------A.........................................................................................................................................................2518.0083401
........................................................................................................................................TCGACGTCGACGC-----AGTG------------------------------------------------TTC..........................................................................................................................................................................................................................................................................................................................2018.0080800
.........................................................................................................................................CGACGTCGACGC-----AGTG------------------------------------------------TTCGCT.......................................................................................................................................................................................................................................................................................................................2216.0060411
.........................................................................................................................................CGACGTCGACGC-----AGTG------------------------------------------------TTCGA........................................................................................................................................................................................................................................................................................................................2116.0061500
.........................................................................................................................................CGACGTCGACGC-----AGTG------------------------------------------------TTCGC........................................................................................................................................................................................................................................................................................................................2115.0051301
........................................................................................................................................TCGACGTCGACGC-----AGTG------------------------------------------------TTCGT........................................................................................................................................................................................................................................................................................................................2213.0030300
........................................................................................................................................TCGACGTCGACGC-----AGTG------------------------------------------------TTCGCTG------------------------------------------------------------------------------------------------------------------------------------------------------------T.........................................................................................................................................................2513.0030201
........................................................................................................................................TCGACGTCGACGC-----AGTG------------------------------------------------TTCGCTG------------------------------------------------------------------------------------------------------------------------------------------------------------AAA.......................................................................................................................................................2712.0022000
..........................................................................................................................................................................................................................................................................................................................................................................................CTGCTGCACTCGCCGACGTC-A...........................................................................................................................2112.0021001
.........................................................................................................................................CGACGTCGACGC-----AGTG------------------------------------------------TTC..........................................................................................................................................................................................................................................................................................................................1912.0022000
........................................................................................................................................TCGACGTCGACGC-----AGTG------------------------------------------------TTCGCTA------------------------------------------------------------------------------------------------------------------------------------------------------------T.........................................................................................................................................................2511.0011000
..........................................................................................................................................GACGTCGACGC-----AGTG------------------------------------------------TTCGCTG------------------------------------------------------------------------------------------------------------------------------------------------------------A.........................................................................................................................................................2311.0010100
........................................................................................................................................TCGACGTCGACGC-----AGTG------------------------------------------------TTCGCTG------------------------------------------------------------------------------------------------------------------------------------------------------------AAT.......................................................................................................................................................2711.0010100
........................................................................................................................................TCGACGTCGACGC-----AGTG------------------------------------------------TTCGCTG------------------------------------------------------------------------------------------------------------------------------------------------------------CT........................................................................................................................................................2611.0010001
.........................................................................................................................................CGACGTCGACGC-----AGTG------------------------------------------------TTCGCTG------------------------------------------------------------------------------------------------------------------------------------------------------------A.........................................................................................................................................................2411.0010100
.........................................................................................................................................CGACGTCGACGC-----AGTG------------------------------------------------TTCGCTG------------------------------------------------------------------------------------------------------------------------------------------------------------..........................................................................................................................................................2311.0010001
...........................................................................................................................................ACGTCGACGC-----AGTG------------------------------------------------TTCG.........................................................................................................................................................................................................................................................................................................................1811.0011000
........................................................................................................................................TCGACGTCGACGC-----AGTG------------------------------------------------TTCGCTG------------------------------------------------------------------------------------------------------------------------------------------------------------AA........................................................................................................................................................2611.0011000
..........................................................................................................................................GACGTCGACGC-----AGTG------------------------------------------------TTCGC........................................................................................................................................................................................................................................................................................................................2011.0010100
........................................................................................................................................TCGACGTCGACGC-----AGTG------------------------------------------------TT...........................................................................................................................................................................................................................................................................................................................1911.0010100
ATACCA----G--AAGA-AGCAAA-GC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TTG----------------------------------------CC-GTTGGCCAG-CTTCAGTGT....................2311.0010001
........................................................................................................................................TCGACGTCGACGC-----AGTG------------------------------------------------TTCAA........................................................................................................................................................................................................................................................................................................................2211.0010100
.........................................................................................................................................CGACGTCGACGC-----AGTG------------------------------------------------TTCGCTG------------------------------------------------------------------------------------------------------------------------------------------------------------T.........................................................................................................................................................2411.0010100
............................................................................................................................................................................................................................................................................................................................................................................................GCTGCACTCGCCGACGTC-A...........................................................................................................................1921.0022000
...........................................................................................................................................................................................................................................................................................................................................................................................TGCTGCACTCGCCGACGTC-AG-----------TT.............................................................................................................2311.0010001
...........................................................................................................................................ACGTCGACGC-----AGTG------------------------------------------------TTCGCTG------------------------------------------------------------------------------------------------------------------------------------------------------------..........................................................................................................................................................2111.0010100
............................................................................................................................................................................................................................................................................................................................................................................................GCTGCACTCGCCGACGTC-AG-----------...............................................................................................................2011.0010001
.........................................................................................................................................CGACGTCGACGC-----AGTG------------------------------------------------TTCA.........................................................................................................................................................................................................................................................................................................................2011.0010001
........................................................................................................................................TCGACGTCGACGC-----AGTG------------------------------------------------TTCGCTG------------------------------------------------------------------------------------------------------------------------------------------------------------CTGA......................................................................................................................................................2811.0010100
...........................................................................................................................................ACGTCGACGC-----AGTG------------------------------------------------TTCGCTG------------------------------------------------------------------------------------------------------------------------------------------------------------C.........................................................................................................................................................2211.0010100
............................................................................................................................................................................................................................................................................................................................................................................................GCTGCACTCGCCGACGTC-AG-----------TTT............................................................................................................2311.0011000
............................................................................................................................................................................................................................................................................................................................................................................................GCTGCACTCGCCGACGTC-AC-----------...............................................................................................................2020.5011000
...........................................................................................................................................................................................................................................................................................................................................................................................TGCTGCACTCGCCGACGTC-AT-----------...............................................................................................................2120.5010001
...........................................................................................................................................................................................................................................................................................................................................................................................TGCTGCACTCGCCGACGTC-............................................................................................................................1920.5011000
.........................................................................................................................................CGACGTCGACGC-----AGTG------------------------------------------------TTCGCTG------------------------------------------------------------------------------------------------------------------------------------------------------------CAAT......................................................................................................................................................2720.5010100
...........................................................................................................................................................................................................................................................................................................................................................................................TGCTGCACTCGCCGACGTT-............................................................................................................................1920.5011000
droYak3
ATACCA----G--AAGA-AGCAAA-GCCAAA---AAC-----------------------------------------------------------------------------------------GCAGCTGCAGTCGACGTCGACGC-----------TACTGC------TG------------------------CTGCTGCTGCCGTT------GCTGCTG---------------------------------------------------------------------------------------------------------------------------------------------------CCACCGCTGCTGCATTCGCCGACGTC-CG-----------TTTCT--GTTTGGCCC---------ATTG----------------------------------------CC-GTTGGCCAG-CTTCAGTGTTCAT-TTCCCCA---TC--GSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.......................A-GCCAAA---AAC-----------------------------------------------------------------------------------------GCAGCTGCAGTCGACGTC...........................................................................................................................................................................................................................................................................................................................................................................................2811.00100100000000
..........................................................................................................................................................................................................................................................................................................................................................................................CTGCTGCATTCGCCGACGTC-C...........................................................................................................................2111.00101000000000
................................................................................................................................................................................................................................G---------------------------------------------------------------------------------------------------------------------------------------------------CCACCGCTGCTGCATTCGCCGAC................................................................................................................................2411.00110000000000
............................................................................................................................................................................................................................................................................................................................................................................................GCTGCATTCGCCGACGTC-CG-----------T..............................................................................................................2111.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................TGCTGCATTCGCCGACGTC-CG-----------...............................................................................................................2111.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................TGCTGCATTCGCCGACGTC-CG-----------T..............................................................................................................2211.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................CTGCTGCATTCGCCGACGTC-CG-----------...............................................................................................................2211.00100000010000
.....A----G--AAGA-AGCAAA-GCCAAA---AAC-----------------------------------------------------------------------------------------GC...........................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
........................................................................................................................................................................................................................................................................................................................................................................................................GACGTC-CG-----------TTTCT--GTTTGGCCC---------......................................................................................2211.00101000000000
....CA----G--AAGA-AGCAAA-GCCAAA---AAC-----------------------------------------------------------------------------------------GCAGC........................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
.........................................................................................................................................CGACGTCGACGC-----------TACTGC------TG------------------------CTGC.................................................................................................................................................................................................................................................................................................................................2411.00100100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................CGTC-CG-----------TTTCT--GTTTGGCCC---------ATTG----------------------------------------CC-.......................................2611.00101000000000
....................................C-----------------------------------------------------------------------------------------GCAGCTGCAGTCGACGTC...........................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
.................................................................................................................................GCTGCAGTCGACGTCGAC........................................................................................................................................................................................................................................................................................................................................................................................1840.25110000000000
droEre2
TCATGAAGCGG-----G-AGTACA-GCTC--------------TG---CA----------------------------------------------------------------------------GCGGCGGCGGC-----------------A---GCAG---C------------------------------------------AGCAG------CAGCGGC--AGCAGC-----------------------------------CGCCG--------GCGGCGGCGAGCTGAATCACCTGATGAACATGTACC-------------------------------------------------------------ATCT-------------GC-CTGATGAGCAGCG-------------------------------------------------CCACCT-G-----------------CTGC-AC-TACCAGACTGACTCGCCCGAT---CT--GSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................GCG-------------------------------------------------CCACCT-G-----------------CTGC-AC-TACCA........................2111.0011000000
.................................................A----------------------------------------------------------------------------GCGGCGGCGGC-----------------A---GCAG---C------------------------------------------AGCAG------CA..............................................................................................................................................................................................................................................................................................................2520.5010000001
.................................................A----------------------------------------------------------------------------GCGGCGGCGGC-----------------A---GCAG---C------------------------------------------AGC........................................................................................................................................................................................................................................................................................................................21110.0910000010
.................................................................................................................................GCGGCGGC-----------------A---GCAG---C------------------------------------------AGCAG------CA..............................................................................................................................................................................................................................................................................................................21150.0711000000
..............................................................................................................................GCGGCGGCGGC-----------------A---GCAG---......................................................................................................................................................................................................................................................................................................................................................................16200.0510000001
................................................................................................................................................................................................................AGCAG------CAGCGGC--AGCAGC-----------------------------------..............................................................................................................................................................................................................................................................18200.0510000100

Generated: 10/20/2015 at 07:00 PM