ID:

dmo_2598

 Coordinate:

scaffold_6680:24025802-24025952 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-9.9 -9.5 -9.5

Flybase annnotation

CDS [Dmoj\GI11303-cds]; exon [dmoj_GLEANR_11385:4]; intron [Dmoj\GI11303-in]

Repeatable elements

NameClassFamilyStrand
Homo6DNAhAT-Pegasus+
mature
star
  1. scaffold_6364:13287-13309 +
  2. scaffold_6500:30563055-30563077 +
  3. dmo_2598  scaffold_6680:24025920-24025942 -

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TTTCAACACGGACAGAACTAAATCGACTCAGGTCGTCGTCCTGATCAAGAATAAATATTCTTTATGGGATGTGCCACGCCTCCTTCTGCCTGTTAAATACTTTTAACAAAACCAATATACCCTGATTTCCCATTTAATTATTTTTACTGTCATAAATTGAATAACTAAATAATTATGTTTGATTTATTTTAAATATTACAGAAGACACTTGATATTGTCGTGTCAGGGAAGTCTGCATATATTTCCATTTG
************************************************************...((((((.((..((..............(((((((....)))))))..............)))).))))))...............******************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V056
head
 V049
head
 V110
male body
..........................................................................................................................TGATTTCCCATTTAATTATTTTTACT....................................................................................................... 26 0 1 3.00 3 2 1 0 0 0
..........................................................................................................................TGATTTCCCATTTAATTATTTTTACTG...................................................................................................... 27 0 1 3.00 3 3 0 0 0 0
.........GGATAGAACTAAATCGACTCAGG........................................................................................................................................................................................................................... 23 1 1 1.00 1 0 1 0 0 0
............................................TCAAGAATAAATATTCTTTATGGGATG.................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
.................................CGTCGTCCTGATCAAGAATAAATATTCC.............................................................................................................................................................................................. 28 1 1 1.00 1 0 1 0 0 0
...................................................................................................................................................................................................................ATATTGTCGTGTCTGAGAAG.................... 20 2 1 1.00 1 0 0 1 0 0
...................................................................................................................................................................................................................ATATTGTCGTGACAGCGCAGT................... 21 3 2 0.50 1 0 0 0 1 0
...................................................................................................................................................................................................................ATATTGTCGTGTCACCGGAGT................... 21 3 2 0.50 1 0 0 1 0 0
............................................................TTTATGGGATGTGCCACGCCTCC........................................................................................................................................................................ 23 0 3 0.33 1 0 0 0 0 1
............................................................TTTATGGGATGTGCCACGCCC.......................................................................................................................................................................... 21 1 5 0.20 1 0 1 0 0 0
.....................................................................TGTGCCACGCCTCCTTCTGCC................................................................................................................................................................. 21 0 20 0.20 4 0 4 0 0 0
.........................................................................CCACGCCTCCTTCTGCCTGTTAA........................................................................................................................................................... 23 0 18 0.06 1 1 0 0 0 0
.....................................................................TGTGCCACGCCACCTTCTGCC................................................................................................................................................................. 21 1 20 0.05 1 0 1 0 0 0

Anti-sense strand reads

AAAGTTGTGCCTGTCTTGATTTAGCTGAGTCCAGCAGCAGGACTAGTTCTTATTTATAAGAAATACCCTACACGGTGCGGAGGAAGACGGACAATTTATGAAAATTGTTTTGGTTATATGGGACTAAAGGGTAAATTAATAAAAATGACAGTATTTAACTTATTGATTTATTAATACAAACTAAATAAAATTTATAATGTCTTCTGTGAACTATAACAGCACAGTCCCTTCAGACGTATATAAAGGTAAAC
*******************************************************************************************************...((((((.((..((..............(((((((....)))))))..............)))).))))))...............************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body
.....TGGGCCAGTCTTGGTTTAGC.................................................................................................................................................................................................................................. 20 3 9 0.11 1 0 0 1
.............................................................................................................TTGGTTATATGGGACTAAAGGGT....................................................................................................................... 23 0 20 0.10 2 2 0 0
........................................................................CGGTGCGGAGGAAGACGGACAATT........................................................................................................................................................... 24 0 18 0.06 1 0 1 0
..........................................................................................................GTTTTGGTTATATGGGACTAAAGGGT....................................................................................................................... 26 0 20 0.05 1 1 0 0
......................................................................CACGGTGCGGAGGAAGACGGAC............................................................................................................................................................... 22 0 20 0.05 1 0 1 0
.........................................................................................................TGTTTTGGTTATATGGGACTAAAGGGT....................................................................................................................... 27 0 20 0.05 1 0 1 0
...........................................................................................................TTTTGGTTATATGGGACTAAAGGGT....................................................................................................................... 25 0 20 0.05 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6680:24025752-24026002 - dmo_2598 TTTCAA-C--ACGGACAGAACTAAATCGACTCAGGTCGTCGTCCTGATCAAGAATAAATATTCTTTATGGGATGTGCCACGCCTCCTTCTGCCTGTTAAATACTTT-------T-AACAAAACCAATATACCCTGATTTCCCAT-TT-A--AT--TATTTTTACTGTCATA------------AAT--TGA------------A-----TAAC-------------------------------------------------------------------------------------TAAATAATTA-TG--------------------------------T---TTGATTTATTTTAAATATTACAGAAGA-------------------------------CA---------------------------CTTGAT--ATTGTCGTGT------------------------------------------------------------------------------------------------------------------------------CAG------G-----------------GA--AGTCTGCATATATTTCCATTTG
droVir3 scaffold_13036:1035918-1036163 + ----------ACGTACATGGCTAGATCGACTCGGCTATTGATGCTGATCAAGAATATATATACCTTATG-GGTCGGAGATGCTTCCTTCTGCCTGTTACATACATTTGGATTTCGCACAAATACAATATACCCCTAT-ACCCATTTT-T--AA--TGGGCTTAGGGTATAA------------AAA--TGA------------A-----TAAG--------AACCAGACTA--------------------------------------TGTGATATA----------------AAATCAAT------------------------------AAACCT----------------------------------------------------TCACAAAA-------CA---------------------------CTTTAATTTTTTTCATTT---------------------------------------------------------------------------------------------------------------------------------------------------------TA--A----ACATACTTTTCAATTTG
droGri2 scaffold_14906:13317639-13317880 - ----------ACAGACATGACCATATCGACTCGGCTGTTGATCATGATCAAGAATATATATAATTTATGGGGTCGGAGATGTTTCCTTCAGCCTGTTACATACACT-------TGCACAAAACCATTATACCCTTTTTACCCATTTT----TA--ATGGTTCAGGGTATAA------------AAT--A----------A--TA---------AT------------------------------------------------------------------------------------AAT------------------------------GAGCAC----------------------------------------------------TCATTAAA----------------------------------------------------------------------------------------------------------TGGTCATTG-----TA--ATATATTTAATAATTTGTAAACAAGTT---------CA---------TTTTGCATTGTTAA----A-----------------GG--TATCTGCATAT-----------
droWil2 scf2_1100000004516:458492-458733 - ----------ACGGACATGGCTAGATCGACTCGGTTTTTGATCCTGATCAAGAATATATATACTTTGTGGGGTCGGAGATGCTTCCTTCTGCCTGTTACATACATT-------TTGGCGACTTTAATATACCATTTC----------ACCCTA--TGGGTGTATGGTATAG------------AAA--C----------A-----------AAACTTATTGAAT----GATATTTATTG-----------------------------------------------------------------------------------------------------AA------------------------------AGTTTTAACTATTTAAATATCAAAG-AAGCTAA----------------------------------------------------------------------------------CATCGGAT-ATG---------------------------------------------------------------------------------------CC-----------------GA--AGTTTATATACCCTTGCAGTCG
dp5 Unknown_singleton_2434:810-1046 - ----------ACAGACAGGGCTCAATGGACTCGGCTATTGATGCTGATCAAGAATGTATATACTTTATGGGGTCGGAAACGATTCCTTCTGGACTTTACACACATCCACTTTTACCACAAATCTAATATACCACAAT-ACTCAT-------TT--TGAGTATCGGGTATAG------------AGA--T----------CAT-A------------------------------------------------------------------------------------------AAATAAAT------------------------------AAATATTCC------------------------------------------------------------------------TCTTATATTACACTAATTACATTTGA----------------------------------------------------------------------------ATCTTCT--------------------------------------------------------TAT------G-----------------TA--AATATGTACATATGTATATTGG
droPer2 scaffold_5703:598-847 - ----------ACAGACATGGCTTAATCGACTCGGCTATTGATGCTGATCAAGAATATATATACTTTATGGGGTCGGAAACGATTCCTTCTGGACGTTACACACATCCACTTTTACCACAAATCTAATATACCCCAAT-ACTCAT-------TT--TGAGTATCGGGTATAA------------AAA--T----------A-----------AACC-----GACC----AATACTTAATGCAATTTAAAAAATACAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAGA---------CAATTTTTTTT-------------------GTGT--AAATACTCGA-TAGAAGCCTACATAAATCCTCCTTTA
droAna3 scaffold_13339:4261912-4262161 - ----------ACGGACATGCTCATATCGACTCAGGAGGTGATCCTGATCAAGAATATATATACTTTATAGGGTCGGAGATGTCTCCTTCACTGCGTTGCACACTTT-------TGACCAAAATTATAATACCCTC----------------TG--CA-----AGGGTATAA------------TAA--A----------A--TATTTTACAAT------------------------------GATTAAAATA---A------CACA-----------------------------------------------------------------ATTTTTTAAAATTAA---------------------------------ATTT----------------------------------------------------------------------------------------------GATAATATGAAATAAAATATTAAATATGGTTATTA-----TC-----------------------------------------------------AATATGAA------A-----------------AA--AATATTCATATATA-TTTTTTG
droBip1 scf7180000395005:18120-18366 - ----------ACGGACATGCTCATATCAACTCAGGAGGTGATCGTGATCAAGAATATATATACTTTATAGGGTCGGAGATGTCTCCTTCACTGCGTTGCACACTTT-------TGGACAAAATTATAATACCCTC----------------TG--CA-----AGGGTATAA------------TAATATGTAATAATAAT----------AAT------------------------------AA------TAA-------------------------------------------------------AAA-------TAATA----------------------------------------------ATAA-------------------------------TT---------------------------TTTTAA--TTTTTAATTTTTTTTTAATAATAATAAAAGATTCCTCAGAGTATACCCCAGGG-ATT-------------------CCCT---------------------------------G-------------------------------G-----------------GG--TA---------------TTTAC
droKik1 scf7180000300739:4740-4974 - ----------ACGGACATGGGTAGATCGACTCGGCTGTTGATGCTGATCAAGAATATATATACTTTATAGGGTCGGAAACGTCTCCTTCACTGCGTTGCAAACTTC-------TGACTGAAATTATAATACCCTGC--------------------A-----AGGGTATAA------------AAA--T----------T-----------TT--------GGC-------------------------------------AACAGCT---------------------------TGGAAAATATTTAAAAA-------TGTTT----------AT--------------ATTTCTTTCATATATTATGAGAGA-------------------------------TT----------TTGGCA---------------AT--ATTTTTGTTTTG------------------------------------------------------------------------------------------------------------------------------A------G-----------------GA--AAAATAAATAAGTTT-------
droFic1 scf7180000453965:13263-13507 + ----------ACAGACAGACATATTTCGATTCAGATCGTGATGCTGATCATGAATATATATACTTTATGGGGTCTGAGGTTTCTCCCTCACTGCGTTGCAAACTTC-------TGGCCTAAATTATAATACCCTT-T----------GCACTG--CA-----AGGGTATAA------------TAA--T----------A--TA---------TT------------------------------------------------TACATATGTATTTATAAAATAAATAATTCAAATATGTAAAAGTTG-TTTTTAAAAAATTAGGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATT-----------------------------------------------------------CGAGACCCATA-----------------GT--TGTCTGTTTATAT---TTCTTG
droEle1 scf7180000491242:86320-86547 - ----------ACGGACATGGCTAGATCGACTCTGCTAGTGATGCTGATCAAGAATATATATTCTTTATAGGGTCGGAAACGTCTCCTTCAATGCGTTACAAACTTC-------TGACTGAAATTATAATACCCTC----------------TG--CA-----AGGGTATAA------------AAA--T----------TAA-A------------------------------------------------------------------------------------------AAATAAAAAAGTTA-CAT-------TTGAA-------------------------------------A---------AAT-------------------------------TG---------------------------TATTGT--TGTTTCCTTGTG----------------------------------------------------------A-----GC-----------------------------------------------------TATATG---------AT------ATAGTCGT-CA--GATTTTTTTTTATTTTCATTTA
droRho1 scf7180000762169:194658-194903 - ----------ACGGACATGGCTATATCGACTCGGCTAGTGACCCTGATCAAGAATATATATACTTTATAGGGTCGGAAACGCTTCCTTCTAGCTGTTACATACTTT-------TGCACGAATACAATATACCCTTTT----------ACTCTA--CGAGTAACGGGTATAA------------ATA--T----------TTA-A------------------------------------------------------------------------------------------GGGGAAAATAGTTAGGAT-------TTCTTACTTAATT----------------------------------------------------------CCAATACC-------TATAAAGATTTTTCTTTG---------------AT--CTATTAGTGTTG------------------------------------------------------------------------------------------------------------------------------G------T-----------------GA--ACATAGTTTATATTCCCAATT-
droBia1 scf7180000299427:412-655 - ----------ACGGACATGGCTAGATAGACTCGGCTAGTGCTCCTGATCAAGAATATATATACTTTATTGGGTCGGAAACGCTTCCTTCTACCTTATACATACTTT-------CCCACGAATCTAGTATACCCTCTT----------ACTCTT--TTACTCTACTCTATAA------------AAA--T----------A-----------AG--------AGC----AA---------------------------------TACC-----------------------------------------------------------------AAATATTCAAATTAA---------------------------------ATACATATATTTACAAG-ACAATAA-------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCGTG-------------------ATATAGCGGTACTTGG-TA--CAAATACATGTATCGTTTTTTG
droTak1 scf7180000415286:115389-115634 - ----------ACGGACATGGCTAGATCGACTCGGCTAGTGACCCTGATCAAGAATATATATACTTTATGGGGTCGGAAACGCTTCCTTCTAGCTGTTACATACTTT-------TGCACGAATCTAGTATACCCTTTT----------ACTCTA--CGAGTAACGGGTATAA------------TTA--A----------A--TA------------------------------------------------------------------------------------------AAACAAACAAATTT-TAT-------TTGA------------------AATTGA-------ATTTT----------GAAAG-------------------------------T----------------------------------------------------------------------------------------------------------------------------------AAGTAAATAAATT---------CGA--------TTTTAATTTAAGATAAGTA-----------------CT--TGAATATATAACATACCATTTC
droEug1 scf7180000409229:4039-4275 + ----------ACGGACATGGCTCAATCGACTTCGCTATTGATCCTGATCAAGAATATATATACTTTATAGGGACAGAAACGTTTCCTTCTACCTGTTACATACTTT-------TCAACGAATCTAGTATACCCTTTT----------ACTCTT--TGAGTAACCGGCATAA------------AAA--G----------A--TAGTT------CT-----GTCA----CAGGTTGTATGCATTGTTTAGAGTACAGAC---ACCACCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAT--A-------------------------------------------------------------TGATTTTTA--------------------------------------------------------------CAATAA------G-----------------GA--AATCTGTTT----TGTTTTCCA
dm3 chr2L:21337385-21337636 + ----------ACAGACAGGGCCAGATCGACTCGGCTATTGATCCTGATCAAGAATATATATCCTTTTTATGGTCG-AAACGCTTCCTTCTGCTTATTACATACTTT-------TCAACGAATCTT-TAAACTAATTT----------ATTTTAAACTAAT-ATGGATATAT-------------AA--T----------A--TATTT------AT-------TTTAAACTA--------------------------------------TTTG--------------------------------------------------------TTT----------------------------------------------------------CCACAATA-------TATTTACATTTTTTTTTAAATTAGTTAATTTTTT----------------------------------------------------------------------------ATTTTTT------------------------------------------------------------------------CATTATTTAATTA--ATTGTGTATCTATTTATATTTG
droSim2 2r:2031092-2031334 - ATACGAACAGACGGCCA-GGCTAGATCGACTCGGCTCTTGATCCTGATCAAGAATATGTATACTCTATATAGTCGGGAACGCTTCCTTCTGCCTGTTACATACTTT-------TCAACGAATCTAGTATACCCTTTT----------ACTCTA--CGAGTAACAGGTATAA------------AAG--G----------A-----------AGCG-----GG---------------------TA------TAAAAATAGATATAGTTTCGTTATTTTTAATCAAATAGTTTTTTCATGCACTTGACA-CTTTTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATATATTTCTATTT-
droSec2 scaffold_59:45994-46261 + ----------ACGGACATTGCCACTTCGACTTGGCTATTGATCCTGATCAAGAATATATATACTTTATATGACCGGAAACGCTTTCTTATACATGATACATTCTTT-------TCAAGGAATTTAGTATACCCTTTT----------GCTCTA--CGAGTAACAGGTATAATTTTAATGTATACAT--TTA------------A-----CATT------------------------------TA-------------------------------------------------------CATAAATA-AT--------------------------------A---TTAATTTACCTGAAATATT----------------CG----------------------------------------------------------------------------------------------GACAATGTACGCCAAAA-ATGACA--GAGTTT---TAATTTGTG-----------------------------------------------------CACCCA------T-----------------GA--ATTCTACATATATTTCTTTCTG
droYak3 v2_chr3h_random_002:595197-595416 - ----------ACGGACATGACCAGATCGACTCGGCTATTGATCCTGATCAAGAATATATATACTTTATATGGTCGGAAACGCTTCCTTCTGCCTGTTACATACTTT--------CCACGAATCTAGTATACCCCCCT------TTT-ACTCTA--CGAGTAACGGGTATAA------------ATA--TGA----------A-A----------T------------------------------------------------T------------------------------AAATATGAAAATTA-AGT-------TAAAA----------------------------------------------AGAA-------------------------------AA---------------------------TTTTAT--GTTTTCATTGTG------------------------------------------------------------------------------------------------------------------------------G------G-----------------GA--A------ATAAAATTTTATTTG
droEre2 scaffold_4845:3268501-3268739 + ----------ACGGACATGGCCAGATCGACTCGGATATTGATCCCGATCAAGAACATATATACTTTATATGGTCGGACACGTTTCCTTCTGCCTGTTACATACTTT-------TCCACGAATCTAGTATACCCCTTT----------ACTCTA--CGAGTAACGGGTATAA------------AAA--T----------G-----------TTCCTAGTAAAAT----CATATTTA--------------------------------------------------------------------------------------------------ATT-------------------TTCAAATAATATAAAAAG-------------------------------TA-----------------------------------------------------------------------------------------------------------------------------------GTAAATACATTTGGATTAGGCTATTTTGGTT-------------------ATGT--------------------------AACCAAATGTTTA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
TTTCAA-C--ACGGACAGAACTAAATCGACTCAGGTCGTCGTCCTGATCAAGAATAAATATTCTTTATGGGATGTGCCACGCCTCCTTCTGCCTGTTAAATACTTT-------T-AACAAAACCAATATACCCTGATTTCCCAT-TT-A--AT--TATTTTTACTGTCATA------------AAT--TGA------------A-----TAAC-------------------------------------------------------------------------------------TAAATAATTA-TG--------------------------------T---TTGATTTATTTTAAATATTACAGAAGA-------------------------------CA---------------------------CTTGAT--ATTGTCGTGT------------------------------------------------------------------------------------------------------------------------------CAG------G-----------------GA--AGTCTGCATATATTTCCATTTGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.....................................................................................................................................TGATTTCCCAT-TT-A--AT--TATTTTTACT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.003200010
.....................................................................................................................................TGATTTCCCAT-TT-A--AT--TATTTTTACTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2713.003300000
...............................................TCAAGAATAAATATTCTTTATGGGATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
....................................CGTCGTCCTGATCAAGAATAAATATTCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000010
...............................................................TTTATGGGATGTGCCACGCCTCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2330.331000001
...............................................................TTTATGGGATGTGCCACGCCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2150.201000010
........................................................................TGTGCCACGCCTCCTTCTGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.204000040
............................................................................CCACGCCTCCTTCTGCCTGTTAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23180.061100000
droVir3
----------ACGTACATGGCTAGATCGACTCGGCTATTGATGCTGATCAAGAATATATATACCTTATG-GGTCGGAGATGCTTCCTTCTGCCTGTTACATACATTTGGATTTCGCACAAATACAATATACCCCTAT-ACCCATTTT-T--AA--TGGGCTTAGGGTATAA------------AAA--TGA------------A-----TAAG--------AACCAGACTA--------------------------------------TGTGATATA----------------AAATCAAT------------------------------AAACCT----------------------------------------------------TCACAAAA-------CA---------------------------CTTTAATTTTTTTCATTT---------------------------------------------------------------------------------------------------------------------------------------------------------TA--A----ACATACTTTTCAATTTGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....................................................................................................TACATTTGGATTTCGCACAAATACAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26203.75750000070000000000000000070000000610000000000000000000000000000000
.................................................................................................................................................................................................................TAAG--------AACCAGACTA--------------------------------------TGTGATATA----------------AAAT.............................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000010000000000000000000000000000
....................................................................................................TACATTTGGATTTCGCACAAATA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.8517000000000000000000001000030060300000310000000000000000000000000
....................................................................................................TACATTTGGATTTCGCACAAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.65130000000000000000000000000000120000000001000000000000000000000000
....................................................................................................TACATTTGGATTTCGCACAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.5511000000100000000000000000400010000000000500000000000000000000000
....................................................................................................TACATTTGGATTTCGCACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.255000000400000000000000001000000000000000000000000000000000000000
.........................................TGCTGATCAAGAATATATATACC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.204000000000000000000000000000021010000000000000000000000000000000
................................................................................................TACATACATTTGGATTTCGCACAAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.204002000000000000000000000002000000000000000000000000000000000000
.................................................................TATG-GGTCGGAGATGCTTCCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2160.171000000000100000000000000000000000000000000000000000000000000000
....................CTAGATCGACTCGGCTAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.153000000000000000000003000000000000000000000000000000000000000000
........................................................................................................................................T-ACCCATTTT-T--AA--TGGGCTTAGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.141000000000000000000000001000000000000000000000000000000000000000
.............................................................................................TGTTACATACATTTGGATTTCGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.102000000000000000000000000000002000000000000000000000000000000000
....................................................................................................TACATTTGGATTTCGCACAAATACAATAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.102002000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................CCATTTT-T--AA--TGGGCTTAGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21110.091000000000000000000000000100000000000000000000000000000000000000
.............TACATGGCTAGATCGACTCGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21140.071000000000000000000000000000000000100000000000000000000000000000
.................................................................................................................................................TT-T--AA--TGGGCTTAGGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16150.071000000000000000000000000000000000000000000000000100000000000000
......................................................................................................................AAATACAATATACCCCTAT-A............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
........................................................................................................TTTGGATTTCGCACAAATACAATA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000000000010000000000000000000000000000
...........................................................................................CCTGTTACATACATTTGGATTTCGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000010000000000000000000000000000000000
...............CATGGCTAGATCGACTCGGCTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000001000000000000000000000000000000000
....................................................................................................TACATTTGGATTTCGCACAAATACAATA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051000000000000000000010000000000000000000000000000000000000000000
....................................................................................................TACATTTGGATTTCGCACAAATACAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000010000000000000000000000000000000000
.....................................................................................................................CAAATACAATATACCCCTAT-ACCCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051001000000000000000000000000000000000000000000000000000000000000
.........................................TGCTGATCAAGAATATATATACCTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000100000000000000000000000000000000000000
............................................................................................CTGTTACATACATTTGGATTTCGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000000000100000000000000000000000000000
.........................................TGCTGATCAAGAATATATATA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000001000000000000000000000000000000000000000000000000000000000
.........................................................................CGGAGATGCTTCCTTCTGCCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000000100000000000000000000000000000000
.....................................................................................................ACATTTGGATTTCGCACAAATACAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000001000000000000000000000000000000000000
...............................................................................................TTACATACATTTGGATTTCGCACAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000010000000000000000000000000000000000000
....................................................................................................TACATTTGGATTTCGCACAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
....................................................................................................TACATTTGGATTTCGCACAAATACAAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000000100000000000000000000000000000000
....................................................................................................TACATTTGGATTTCGCACAAATACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000000000000010000000000000000000000000
...............................................................................TGCTTCCTTCTGCCTGTTACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000010000000000000000000000000000000000
..................................................................................................CATACATTTGGATTTCGCACAAATACAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051000000000000000000000000000000000001000000000000000000000000000
........................................................................TCGGAGATGCTTCCTTCTGCCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000010000000000000000000000000000000000
................................................CAAGAATATATATACCTTATG-GG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000000000010000000000000000000000000000
.............................................................................................TGTTACATACATTTGGATTTCGCACAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000100000000000000000000000000000000000000
...............................................................................................TTACATACATTTGGATTTCGCACAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000001000000000000000000000000000000000000
droGri2
----------ACAGACATGACCATATCGACTCGGCTGTTGATCATGATCAAGAATATATATAATTTATGGGGTCGGAGATGTTTCCTTCAGCCTGTTACATACACT-------TGCACAAAACCATTATACCCTTTTTACCCATTTT----TA--ATGGTTCAGGGTATAA------------AAT--A----------A--TA---------AT------------------------------------------------------------------------------------AAT------------------------------GAGCAC----------------------------------------------------TCATTAAA----------------------------------------------------------------------------------------------------------TGGTCATTG-----TA--ATATATTTAATAATTTGTAAACAAGTT---------CA---------TTTTGCATTGTTAA----A-----------------GG--TATCTGCATAT-----------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
----------ACGGACATGGCTAGATCGACTCGGTTTTTGATCCTGATCAAGAATATATATACTTTGTGGGGTCGGAGATGCTTCCTTCTGCCTGTTACATACATT-------TTGGCGACTTTAATATACCATTTC----------ACCCTA--TGGGTGTATGGTATAG------------AAA--C----------A-----------AAACTTATTGAAT----GATATTTATTG-----------------------------------------------------------------------------------------------------AA------------------------------AGTTTTAACTATTTAAATATCAAAG-AAGCTAA----------------------------------------------------------------------------------CATCGGAT-ATG---------------------------------------------------------------------------------------CC-----------------GA--AGTTTATATACCCTTGCAGTCGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................................................TATATACTTTGTGGGGTCGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.25505000
...........................................................................................................................................................................................................................................................................................................................................................................................................AG-AAGCTAA----------------------------------------------------------------------------------CATCGGAT-ATG---------------------------------------------------------------------------------------CC-----------------..........................2250.20100100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-ATG---------------------------------------------------------------------------------------CC-----------------GA--AGTTTATATACCCTTG......25130.15200020
...................................................................................................................GGCGACTTTAATATACCATTTC----------ACCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.10202000
................................................................................................................................................................................................................................................................................................................................................................................................TTAAATATCAAAG-AAGCTAA----------------------------------------------------------------------------------CATCGG..........................................................................................................................................26200.05100010
...........CGGACATGGCTAGATCGACTCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100010
............................................................TACTTTGTGGGGTCGGAGATGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100010
................ATGGCTAGATCGACTCGGTTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
.............................CTCGGTTTTTGATCCTGATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
dp5
----------ACAGACAGGGCTCAATGGACTCGGCTATTGATGCTGATCAAGAATGTATATACTTTATGGGGTCGGAAACGATTCCTTCTGGACTTTACACACATCCACTTTTACCACAAATCTAATATACCACAAT-ACTCAT-------TT--TGAGTATCGGGTATAG------------AGA--T----------CAT-A------------------------------------------------------------------------------------------AAATAAAT------------------------------AAATATTCC------------------------------------------------------------------------TCTTATATTACACTAATTACATTTGA----------------------------------------------------------------------------ATCTTCT--------------------------------------------------------TAT------G-----------------TA--AATATGTACATATGTATATTGGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................TTACCACAAATCTAATATACCACAAT-AC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2841.0040040000000
.........................................TGCTGATCAAGAATGTATATACTTTA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2671.0070000000430
...................................................................TGGGGTCGGAAACGATTCCTTCTGGACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2880.8870610000000
.........................................TGCTGATCAAGAATGTATATACTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.8660200000400
...............................................................................................................TTACCACAAATCTAATATACCACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2450.8040100000300
.........................................TGCTGATCAAGAATGTATATACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2370.7150300000200
...............................................................................................................TTACCACAAATCTAATATACCACAAT-A............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2740.5020000000200
.........................................TGCTGATCAAGAATGTATATAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2280.5040100000120
.............GACAGGGCTCAATGGACTCGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21170.4781600001000
..............ACAGGGCTCAATGGACTCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21160.4470400000012
.........................................TGCTGATCAAGAATGTATATACTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2570.4330200000010
...............................................................................................................TTACCACAAATCTAATATACCACAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.2510010000000
................................................................................................................TACCACAAATCTAATATACCACAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2440.2510100000000
........................................................................TCGGAAACGATTCCTTCTGGACTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2490.2220200000000
.................................................................................ATTCCTTCTGGACTTTACACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2150.2010100000000
........................................................................TCGGAAACGATTCCTTCTGGACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23100.2020200000000
..........ACAGACAGGGCTCAATGGACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21150.2030100002000
.............GACAGGGCTCAATGGACTCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20180.1730300000000
...............................................................................CGATTCCTTCTGGACTTTACAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2260.1710010000000
.........................................................................CGGAAACGATTCCTTCTGGACTTTAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2660.1710100000000
.............................................GATCAAGAATGTATATACTTTATGGGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2760.1710100000000
...............CAGGGCTCAATGGACTCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20180.1730300000000
.........................TGGACTCGGCTATTGATGCTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1530300000000
....................................................................GGGGTCGGAAACGATTCCTTCTGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1530300000000
...............................................................................................................TTACCACAAATCTAATATACCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2270.1410100000000
.............................................GATCAAGAATGTATATACTTTAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2370.1410100000000
....................................................................GGGGTCGGAAACGATTCCTTCTGGACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2780.1310100000000
..............ACAGGGCTCAATGGACTCGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20170.1220200000000
......................................................................GGTCGGAAACGATTCCTTCTGGACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2590.1110010000000
................AGGGCTCAATGGACTCGGCTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21180.1120200000000
.........................................TGCTGATCAAGAATGTATATA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21100.1010000000100
.....................................................ATGTATATACTTTATGGGGTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020100001000
...............................CGGCTATTGATGCTGATCAAGAATG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25150.0710100000000
................AGGGCTCAATGGACTCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19180.0610100000000
...............CAGGGCTCAATGGACTCGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19190.0510100000000
............................................................TACTTTATGGGGTCGGAAACGATT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000100000
........................ATGGACTCGGCTATTGATGCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
....................CTCAATGGACTCGGCTATTGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
................AGGGCTCAATGGACTCGGCTT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
.......................AATGGACTCGGCTATTGATGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0511000000000
.....................TCAATGGACTCGGCTATTGAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
droPer2
----------ACAGACATGGCTTAATCGACTCGGCTATTGATGCTGATCAAGAATATATATACTTTATGGGGTCGGAAACGATTCCTTCTGGACGTTACACACATCCACTTTTACCACAAATCTAATATACCCCAAT-ACTCAT-------TT--TGAGTATCGGGTATAA------------AAA--T----------A-----------AACC-----GACC----AATACTTAATGCAATTTAAAAAATACAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAGA---------CAATTTTTTTT-------------------GTGT--AAATACTCGA-TAGAAGCCTACATAAATCCTCCTTTASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................................................GAAACGATTCCTTCTGGACGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.255000005
droAna3
----------ACGGACATGCTCATATCGACTCAGGAGGTGATCCTGATCAAGAATATATATACTTTATAGGGTCGGAGATGTCTCCTTCACTGCGTTGCACACTTT-------TGACCAAAATTATAATACCCTC----------------TG--CA-----AGGGTATAA------------TAA--A----------A--TATTTTACAAT------------------------------GATTAAAATA---A------CACA-----------------------------------------------------------------ATTTTTTAAAATTAA---------------------------------ATTT----------------------------------------------------------------------------------------------GATAATATGAAATAAAATATTAAATATGGTTATTA-----TC-----------------------------------------------------AATATGAA------A-----------------AA--AATATTCATATATA-TTTTTTGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................TGCTCATATCGACTCAGGAGGTGATC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.70140014000
.....................CATATCGACTCAGGAGGTGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.204400000
.............GACATGCTCATATCGACTCAGGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.102200000
................................................................................................TGCACACTTT-------TGACCAAAATTATAATA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051010000
droBip1
----------ACGGACATGCTCATATCAACTCAGGAGGTGATCGTGATCAAGAATATATATACTTTATAGGGTCGGAGATGTCTCCTTCACTGCGTTGCACACTTT-------TGGACAAAATTATAATACCCTC----------------TG--CA-----AGGGTATAA------------TAATATGTAATAATAAT----------AAT------------------------------AA------TAA-------------------------------------------------------AAA-------TAATA----------------------------------------------ATAA-------------------------------TT---------------------------TTTTAA--TTTTTAATTTTTTTTTAATAATAATAAAAGATTCCTCAGAGTATACCCCAGGG-ATT-------------------CCCT---------------------------------G-------------------------------G-----------------GG--TA---------------TTTACSizeHit CountTotal NormTotal
No Reads
droKik1
----------ACGGACATGGGTAGATCGACTCGGCTGTTGATGCTGATCAAGAATATATATACTTTATAGGGTCGGAAACGTCTCCTTCACTGCGTTGCAAACTTC-------TGACTGAAATTATAATACCCTGC--------------------A-----AGGGTATAA------------AAA--T----------T-----------TT--------GGC-------------------------------------AACAGCT---------------------------TGGAAAATATTTAAAAA-------TGTTT----------AT--------------ATTTCTTTCATATATTATGAGAGA-------------------------------TT----------TTGGCA---------------AT--ATTTTTGTTTTG------------------------------------------------------------------------------------------------------------------------------A------G-----------------GA--AAAATAAATAAGTTT-------SizeHit CountTotal NormTotal
No Reads
droFic1
----------ACAGACAGACATATTTCGATTCAGATCGTGATGCTGATCATGAATATATATACTTTATGGGGTCTGAGGTTTCTCCCTCACTGCGTTGCAAACTTC-------TGGCCTAAATTATAATACCCTT-T----------GCACTG--CA-----AGGGTATAA------------TAA--T----------A--TA---------TT------------------------------------------------TACATATGTATTTATAAAATAAATAATTCAAATATGTAAAAGTTG-TTTTTAAAAAATTAGGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATT-----------------------------------------------------------CGAGACCCATA-----------------GT--TGTCTGTTTATAT---TTCTTGSizeHit CountTotal NormTotal
No Reads
droEle1
----------ACGGACATGGCTAGATCGACTCTGCTAGTGATGCTGATCAAGAATATATATTCTTTATAGGGTCGGAAACGTCTCCTTCAATGCGTTACAAACTTC-------TGACTGAAATTATAATACCCTC----------------TG--CA-----AGGGTATAA------------AAA--T----------TAA-A------------------------------------------------------------------------------------------AAATAAAAAAGTTA-CAT-------TTGAA-------------------------------------A---------AAT-------------------------------TG---------------------------TATTGT--TGTTTCCTTGTG----------------------------------------------------------A-----GC-----------------------------------------------------TATATG---------AT------ATAGTCGT-CA--GATTTTTTTTTATTTTCATTTASizeHit CountTotal NormTotal
No Reads
droRho1
----------ACGGACATGGCTATATCGACTCGGCTAGTGACCCTGATCAAGAATATATATACTTTATAGGGTCGGAAACGCTTCCTTCTAGCTGTTACATACTTT-------TGCACGAATACAATATACCCTTTT----------ACTCTA--CGAGTAACGGGTATAA------------ATA--T----------TTA-A------------------------------------------------------------------------------------------GGGGAAAATAGTTAGGAT-------TTCTTACTTAATT----------------------------------------------------------CCAATACC-------TATAAAGATTTTTCTTTG---------------AT--CTATTAGTGTTG------------------------------------------------------------------------------------------------------------------------------G------T-----------------GA--ACATAGTTTATATTCCCAATT-SizeHit CountTotal NormTotal
No Reads
droBia1
----------ACGGACATGGCTAGATAGACTCGGCTAGTGCTCCTGATCAAGAATATATATACTTTATTGGGTCGGAAACGCTTCCTTCTACCTTATACATACTTT-------CCCACGAATCTAGTATACCCTCTT----------ACTCTT--TTACTCTACTCTATAA------------AAA--T----------A-----------AG--------AGC----AA---------------------------------TACC-----------------------------------------------------------------AAATATTCAAATTAA---------------------------------ATACATATATTTACAAG-ACAATAA-------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCGTG-------------------ATATAGCGGTACTTGG-TA--CAAATACATGTATCGTTTTTTGSizeHit CountTotal NormTotal
No Reads
droTak1
----------ACGGACATGGCTAGATCGACTCGGCTAGTGACCCTGATCAAGAATATATATACTTTATGGGGTCGGAAACGCTTCCTTCTAGCTGTTACATACTTT-------TGCACGAATCTAGTATACCCTTTT----------ACTCTA--CGAGTAACGGGTATAA------------TTA--A----------A--TA------------------------------------------------------------------------------------------AAACAAACAAATTT-TAT-------TTGA------------------AATTGA-------ATTTT----------GAAAG-------------------------------T----------------------------------------------------------------------------------------------------------------------------------AAGTAAATAAATT---------CGA--------TTTTAATTTAAGATAAGTA-----------------CT--TGAATATATAACATACCATTTCSizeHit CountTotal NormTotal
No Reads
droEug1
----------ACGGACATGGCTCAATCGACTTCGCTATTGATCCTGATCAAGAATATATATACTTTATAGGGACAGAAACGTTTCCTTCTACCTGTTACATACTTT-------TCAACGAATCTAGTATACCCTTTT----------ACTCTT--TGAGTAACCGGCATAA------------AAA--G----------A--TAGTT------CT-----GTCA----CAGGTTGTATGCATTGTTTAGAGTACAGAC---ACCACCT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGAT--A-------------------------------------------------------------TGATTTTTA--------------------------------------------------------------CAATAA------G-----------------GA--AATCTGTTT----TGTTTTCCASizeHit CountTotal NormTotal
No Reads
dm3
----------ACAGACAGGGCCAGATCGACTCGGCTATTGATCCTGATCAAGAATATATATCCTTTTTATGGTCG-AAACGCTTCCTTCTGCTTATTACATACTTT-------TCAACGAATCTT-TAAACTAATTT----------ATTTTAAACTAAT-ATGGATATAT-------------AA--T----------A--TATTT------AT-------TTTAAACTA--------------------------------------TTTG--------------------------------------------------------TTT----------------------------------------------------------CCACAATA-------TATTTACATTTTTTTTTAAATTAGTTAATTTTTT----------------------------------------------------------------------------ATTTTTT------------------------------------------------------------------------CATTATTTAATTA--ATTGTGTATCTATTTATATTTGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.........................................TCCTGATCAAGAATATATATCCTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2423.5070000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000002000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.....................CAGATCGACTCGGCTATTGAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21202.254500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103000000000000000000000000000000000000000000000000000000000000000000000382000000000000000000000001000
........................ATCGACTCGGCTATTGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17201.252500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TCGACTCGGCTATTGATCCTGATCAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26201.15230000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000003000000000000000000000908000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TCGACTCGGCTATTGATCCTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21201.052100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000000000000000000000000000001000000000000150000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000
...........CAGACAGGGCCAGATCGACTCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2421.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................TCCTGATCAAGAATATATATCCTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2521.0020000000000000000000000000000000000000000001000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................AGATCGACTCGGCTATTGATC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21201.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000170000000000000000000000000020
...............................................................TTTTTATGGTCG-AAACGCTTCCTTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
........................ATCGACTCGGCTATTGATCCT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21201.00200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000100000000000000000000000000000000002030100000000000000000000000000000000000000000000000000000000000000000000065000000000000000000000100000
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droSim2
ATACGAACAGACGGCCA-GGCTAGATCGACTCGGCTCTTGATCCTGATCAAGAATATGTATACTCTATATAGTCGGGAACGCTTCCTTCTGCCTGTTACATACTTT-------TCAACGAATCTAGTATACCCTTTT----------ACTCTA--CGAGTAACAGGTATAA------------AAG--G----------A-----------AGCG-----GG---------------------TA------TAAAAATAGATATAGTTTCGTTATTTTTAATCAAATAGTTTTTTCATGCACTTGACA-CTTTTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATATATTTCTATTT-SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................................................................................................................................TA------TAAAAATAGATATAGTTTCGTTAT....................................................................................................................................................................................................................................................................................................................................................................2612.00200000010010000000
......................................................................................................................................................................TATAA------------AAG--G----------A-----------AGCG-----GG---------------------TA------TAAAAATA....................................................................................................................................................................................................................................................................................................................................................................................2612.00200000000010010000
.......................GATCGACTCGGCTCTTGATCCTGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2421.50300010000002000000
.........................................................................................TGCCTGTTACATACTTT-------TCAACGAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25201.5030000000300000000000
...................................................................................................................................................................................................................AGCG-----GG---------------------TA------TAAAAATAGATATAGTT...........................................................................................................................................................................................................................................................................................................................................................................2511.00100000000010000000
....................CTAGATCGACTCGGCTCTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000010000000000
.......................GATCGACTCGGCTCTTGATCCTGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2521.00200000000002000000
...............................................................................................................................................................TAACAGGTATAA------------AAG--G----------A-----------AGCG-----GG---------------------T...................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000001000000000
.............GCCA-GGCTAGATCGACTCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000000000100000
.....................................................................................................................................................TCTA--CGAGTAACAGGTATAA------------AAG--G----------A-----------....................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000100000000
........................................................................................................TT-------TCAACGAATCTAGTATACCCTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.9018000600100000002000
.......................GATCGACTCGGCTCTTGATC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2030.67200000000002000000
.......................GATCGACTCGGCTCTTGATCCTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.50100000000001000000
.........................TCGACTCGGCTCTTGATCCTGATCAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.50100000000000010000
.....................TAGATCGACTCGGCTCTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.50100000000100000000
.....................TAGATCGACTCGGCTCTTGATCCTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.50100000000001000000
.......................GATCGACTCGGCTCTTGATCCTGATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.50100010000000000000
........................................................................................................TT-------TCAACGAATCTAGTATACCCTTTT----------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.45900000000900000000
..............................TCGGCTCTTGATCCTGATCAAGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2430.33100000000100000000
.................................................................................................ACATACTTT-------TCAACGAATCTAGTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.30600000006000000000
....................................CTTGATCCTGATCAAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17110.27300000010200000000
........................................................................................CTGCCTGTTACATACTTT-------TCAACGAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.15300000020000010000
.................................................................................................ACATACTTT-------TCAACGAATCTAGTAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.15300000000003000000
...................................................................................TCCTTCTGCCTGTTACATACTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.15300000000300000000
.................................GCTCTTGATCCTGATCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1780.13100000000001000000
..................................................................................TTCCTTCTGCCTGTTACATAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.10200000000020000000
.........................................................................................TGCCTGTTACATACTTT-------TCAACGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.10200000020000000000
........................................ATCCTGATCAAGAATATGTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20100.10110000000000000000
....................................CTTGATCCTGATCAAGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18100.10100000000100000000
.....................................................................................CTTCTGCCTGTTACATACTTT-------TCAACGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05100000000010000000
.................................................................................................ACATACTTT-------TCAACGAATCTAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100000000001000000
.......................................GATCCTGATCAAGAATAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100000000001000000
.............................................................................................TGTTACATACTTT-------TCAACGAATCTAGTA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05100000000010000000
...................GCTAGATCGACTCGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15200.05100000010000000000
.................................................................................................................................ACCCTTTT----------ACTCTA--CGAGTAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100000000001000000
.......................................................................................TCTGCCTGTTACATACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17200.05100000010000000000
........................................................................................CTGCCTGTTACATACTTT-------TCAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100000010000000000
...................................................................................................ATACTTT-------TCAACGAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15200.05100000000010000000
...........................................................................................................................TAGTATACCCTTTT----------ACTCTA--CGAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100000000100000000
............................................................................................CTGTTACATACTTT-------TCAACGAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100010000000000000
......................................................................................TTCTGCCTGTTACATACTTT-------TCAACGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05100100000000000000
.......................................................................................................TTT-------TCAACGAATCTAGTATACCCTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100000000000010000
...................................................................................TCCTTCTGCCTGTTACATACTTT-------TCAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05100000000000001000
.......................................................................................TCTGCCTGTTACATACTTT-------TCAACGAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05100000000010000000
......................................................................................TTCTGCCTGTTACATACTTT-------TCAACGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05100100000000000000
droSec2
----------ACGGACATTGCCACTTCGACTTGGCTATTGATCCTGATCAAGAATATATATACTTTATATGACCGGAAACGCTTTCTTATACATGATACATTCTTT-------TCAAGGAATTTAGTATACCCTTTT----------GCTCTA--CGAGTAACAGGTATAATTTTAATGTATACAT--TTA------------A-----CATT------------------------------TA-------------------------------------------------------CATAAATA-AT--------------------------------A---TTAATTTACCTGAAATATT----------------CG----------------------------------------------------------------------------------------------GACAATGTACGCCAAAA-ATGACA--GAGTTT---TAATTTGTG-----------------------------------------------------CACCCA------T-----------------GA--ATTCTACATATATTTCTTTCTGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................TCGACTTGGCTATTGATCCTGAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2390.2220020
.........................TCGACTTGGCTATTGATCCTGATCAAGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2860.1711000
.........................TCGACTTGGCTATTGATCCTGATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.1411000
......................................TGATCCTGATCAAGAATATATATACTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510010
droYak3
----------ACGGACATGACCAGATCGACTCGGCTATTGATCCTGATCAAGAATATATATACTTTATATGGTCGGAAACGCTTCCTTCTGCCTGTTACATACTTT--------CCACGAATCTAGTATACCCCCCT------TTT-ACTCTA--CGAGTAACGGGTATAA------------ATA--TGA----------A-A----------T------------------------------------------------T------------------------------AAATATGAAAATTA-AGT-------TAAAA----------------------------------------------AGAA-------------------------------AA---------------------------TTTTAT--GTTTTCATTGTG------------------------------------------------------------------------------------------------------------------------------G------G-----------------GA--A------ATAAAATTTTATTTGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.........................................TCCTGATCAAGAATATATATACTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.15303000000000
..................................................................................TTCCTTCTGCCTGTTACATACTTT--------CCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.10202000000000
..................................................................................TTCCTTCTGCCTGTTACATACTTT--------CC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05101000000000
droEre2
----------ACGGACATGGCCAGATCGACTCGGATATTGATCCCGATCAAGAACATATATACTTTATATGGTCGGACACGTTTCCTTCTGCCTGTTACATACTTT-------TCCACGAATCTAGTATACCCCTTT----------ACTCTA--CGAGTAACGGGTATAA------------AAA--T----------G-----------TTCCTAGTAAAAT----CATATTTA--------------------------------------------------------------------------------------------------ATT-------------------TTCAAATAATATAAAAAG-------------------------------TA-----------------------------------------------------------------------------------------------------------------------------------GTAAATACATTTGGATTAGGCTATTTTGGTT-------------------ATGT--------------------------AACCAAATGTTTASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/18/2015 at 02:57 AM