ID:

dmo_2597

Coordinate:

scaffold_6680:24012234-24012384 -

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-18.7 -18.4 -18.4

Flybase annnotation

CDS [Dmoj\GI11303-cds]; exon [dmoj_GLEANR_11385:5]; intron [Dmoj\GI11303-in]

Repeatable elements

NameClassFamilyStrand
Helitron-1N1_DVirRCHelitron+

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TGATCAAGGATATATATACTTTATGGGGTCTGCGATGATTCCTTCTGCCTTTTACATACTTCTCACAAAACCATTATACCCTGATTTCCCATTTTCAATGGGGCATAAAAAACTTCAGAAAATTATTGGGCCAATTTATAAAAACTTGTAACTGATTTTATGATTATCTCCATATATTTTATATCCTTACATATGGGTCAGTTTCTTACGAGGAAGCACAAATCAAATATGTTTGGAAGAATGATGAAGAC
**************************************************..............................((((...(((((.......((((.((((((......(((.((((((.(((.((..((((((....)))))).)).))).)))))).))).......)))))).)))).....)))))))))**************************************************
Read size # Mismatch Hit Count Total Norm Total M046
female body
M060
embryo
V049
head
..................................................TTTACATACTTCTCACAAAACC................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0
...................TTTATGGGGTCTGCGATGATT................................................................................................................................................................................................................... 21 0 20 0.30 6 6 0 0
..............................TGCGATGATTCCTTCTGCCTTTTACA................................................................................................................................................................................................... 26 0 6 0.17 1 1 0 0
...........................GTCTGCGATGATTCCTTCTGCCTTTTACA................................................................................................................................................................................................... 29 0 6 0.17 1 1 0 0
............................................................................................................................................................................................ACATATGAGTCAGGGTCTTA........................................... 20 3 7 0.14 1 0 0 1
...........................................................TTCTCACAAAACCATTAAACCC.......................................................................................................................................................................... 22 1 8 0.13 1 0 1 0
.......................................................................................................CATAAGAAACCTCAGAAA.................................................................................................................................. 18 2 14 0.07 1 0 1 0
...................................................................AAACCATTATACCCTGATTTCC.................................................................................................................................................................. 22 0 20 0.05 1 0 1 0

Anti-sense strand reads

ACTAGTTCCTATATATATGAAATACCCCAGACGCTACTAAGGAAGACGGAAAATGTATGAAGAGTGTTTTGGTAATATGGGACTAAAGGGTAAAAGTTACCCCGTATTTTTTGAAGTCTTTTAATAACCCGGTTAAATATTTTTGAACATTGACTAAAATACTAATAGAGGTATATAAAATATAGGAATGTATACCCAGTCAAAGAATGCTCCTTCGTGTTTAGTTTATACAAACCTTCTTACTACTTCTG
**************************************************..............................((((...(((((.......((((.((((((......(((.((((((.(((.((..((((((....)))))).)).))).)))))).))).......)))))).)))).....)))))))))**************************************************
Read size # Mismatch Hit Count Total Norm Total M060
embryo
M046
female body
.CTAGTTCCTATATATATGAAATACCCCA.............................................................................................................................................................................................................................. 28 0 4 0.25 1 1 0
..........................CCAGACGCTACTAAGGAAGACGGAAAATG.................................................................................................................................................................................................... 29 0 6 0.17 1 1 0
........................................GGAAGACGGAAAATGTATGAA.............................................................................................................................................................................................. 21 0 16 0.13 2 0 2
..................................................................................................................................................................................................GCCAGTCCGAGAATGCTC....................................... 18 3 18 0.06 1 1 0
...............TATGAAATACCCCAGACGCTA....................................................................................................................................................................................................................... 21 0 20 0.05 1 0 1
.....................................AAAGGAAGACGGAAAATG.................................................................................................................................................................................................... 18 1 20 0.05 1 0 1
......................TACCCCAGACGCTACTAAGGA................................................................................................................................................................................................................ 21 0 20 0.05 1 0 1
.....................ATACCCCAGACGCTACTAAGGAAG.............................................................................................................................................................................................................. 24 0 20 0.05 1 0 1
.........................CCCAGACGCTACTAAGGAAGA............................................................................................................................................................................................................. 21 0 20 0.05 1 1 0
..............ATATGAAATACCCCAGACGCTACTAAGG................................................................................................................................................................................................................. 28 0 20 0.05 1 0 1
.............................GACGCTACTAAGGAAGACG........................................................................................................................................................................................................... 19 0 20 0.05 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6680:24012184-24012434 - dmo_2597 TGA----TCAAGGATATATATACTTTATGGGGTCTGCGATGATTCCTTCTGCCTTTTACATACTT-------CTC-AC-AAAACCATTATACCCTGATTTCCCATTTTC--------------AA------TGGGGCATAAAAAACTT---CAG---------AAAATTATTGGGCCA-------ATTT-------------------------------------------------------------------------------------------------------------------ATAAAAACT---TGTAACTG-----AT--TTTAT-------G------ATTATCTCCATAT------------ATTTTATA----------------------TCCTTACATATG-GGTC-------------------------------------------------------------------------------------------------------------------AGTTTCTTACGAG---------GA----------------------------------A----GCACAA-------------A---------------------------------TCAAATATGT----TTGGAAGA-------------------ATGATG------------AAGAC
droVir3 scaffold_13047:4794009-4794250 + TGA----TCAAGAATATATATACTTTATGGGGTCGGAAATGCTTCCTTCTGCCTGTTACATACATA----TTTTGCAC-AAATAAAATATACCCTTA-TACCCATTTTT--------------AATGGGTTCAGGGTATAATAAGCAC-----------------------------AGAA-------TA-------------------------------------------------------------------------------------------------------------------TAATTACT---GGTAATAA-----ATCATGTATGAAACTT---------TATCTTTGTGC------------AT----------------------------------------------------------------ATTATATAT---------------TATATGAA-----------------GAAA---------------------------------------------------------CAGTTTTC-----------------AA------------TAAA------------------------------------------A--------AAAAAAAAAAGAAAATAT----TATAAAAT-------------------------------------ATGAT
droGri2 scaffold_8789:3437-3693 - TGA----TCAAGAATATAGATACTTTATGGGGTCGGAGATGCTTTCTTCTGTCTGTTACATACAT-------TTGCAC-AAAACCATTATACACTTTTTACTCATTTTT--------------AATGGGCTTAGGGTATAATAATATA-----------------------------------------------GTTGAAGTAATCGTTTTTAATTA---T-ATATTTTC----------TTT------ATATTTAT--ATTT------------------------ATTTATA---------------------TATGTTT---------------G-----T--------------A----------------C---TTATATTT----------------------ATTTAATGTGGGT----------------------------T---------------TATATCAA-----------------------TTGAAACAGAGAATAACTAACT------------------------------------------------------------------------------------------------------------------------------------------------------TAAGAGA-------------------ATGACT------------AAAAC
droWil2 scf2_1100000004521:8305385-8305613 - TGA----TCAAGAATATATATACTTTGTGGGGTCGGAGATGCTTCCTTCTGCCTGTTACATACAT-------TTTGGC-GACTTTAATATACCATTT-CACCC--------------------TATGGGTGTATGGTATAAAAATTAA---TTG----------------------------------------------------------------TGG---------AATATT-----------------------------------------------------------------------------------------------------------------------------TATT------------------------------------------------------------------------------GTAATGTTTTAAATT-----------------------TTGTTGAATAGG--------------TTA-AAAC-AATTTAAGGGAGCTTCCAAAATCTGTTTTGCACAAA--------------------------------------------------------------------------------------A--------AACCACAATCAAATATAT----TT-----------------------------TG------------AACAA
dp5 Unknown_group_21:27168-27414 - TGA----TCAAGAATATATATACTTTATGGGGTTGGAAACGATTCCTTCTGGACGTTACACACATCCACTTTTACCAC-AAATCTAATATACCCCAA-TACTCATT------------------TTGAGTATCGGGTATAAAAAGAACTT-CT------------------------------------------------------------AACTAAG-----------------------------------------GCT--T-----------------TTATTCGCACAAAAA-----ATAAAAACC---TATGACT---------------G-----T---------AGTTTTAGAGC-----------------------------------------------A---------------------------------------------CATATATATTAGTATGT-----------------GGCACATGC-------------------------------------------------------------A----------------------------------A----GCA-----------------------CATA-----------------------CTAAATTTAG----TCGAAAGT-------------------ATG-CC------------AAAAC
droPer2 scaffold_54:14522-14770 + TGA----TCATGAATATATATACTTTATGGGGTCGGAAACGATTCCTTCTGGACGTTACACACATCGACTTTTACCACAAAATCTAATATACCCCAA-TACTCATT------------------TTGAGTATCGAGTATAAAAATACA-T-C-------------------------------------------------------------AATAGAG-----------------------------------------GCA--A-----------------TGATTTAGACAAAAA-----AAAAAAA-------AGTAGCGCACAAT--TTTAT-------T------TTT-TCCTCA-------AATATAAC---TTATAGCT----------------------ATGGAATGG-A---------------------------------------------------------------------------------------------------------------------------------------------------------G-TGAA------------TTTGCTCGA----CAA-------------ATA----AA------------------------------TA----------------------------------ATTTTA------------AAGAC
droAna3 scaffold_13266:5140740-5140999 + TGA----TCAAGAATATATATACTTTATAGGGTCGGAGATGTCTCCTTCACTGCGTTGCACACTT-------TTGACC-AAAATTATAATACGCTCT---------------------------GC-----AAGGGTATAAAAAACAA---------------GAAAGGAA--AGC-----------------------------------------------------------T-AACT-----------TCAAGCGGAGCCGAAGTTGATATACCCT---TGCAGTTAAGCA--------------------------------GAAG--CTTATG-----T---------TATTTTCATAT------------AT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATC---------GGA------TCCTAT-----A--------TATTTGTCCGATCCTTATAAGAATTTCACCATCAAT----------------------------------AAAATTTCT-AATAAAA-------------------ATATTG------------GAAAC
droBip1 scf7180000395974:506-753 + TGA----TCAAGAATATATATACTTTATAGGGTCGGAGATGTCTCCTTCACTGCGTTGCACACTT-------TTGACC-AAAATTATAATACCCTCT---------------------------GC-----AAGGGTATAAAAATCAA---------------AAAATAAA--TG---------------------------------A--------------------------T-T-CT---------TATCATGT--GGCCTAAGTGG-------------------------CCTAA------A-----TTA-TAATGTGATTTAA-------T-------ATTTATTTTA-TGGTGA-------AATATTAT---ATTTAGATATTATTTAGAGAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G----GCACA-------------TACATA--TATGATTTAAAGGAG------------------------------AAAA-------------------ATGTTT------------AAAAT
droKik1 scf7180000302355:591456-591685 + TGA----TCAAGAATATATATACTTTATAGGGTCGGAAACGTCTCCTTCACTGCGTTGCAAACTT-------CTGACT-GAAATTATAATACCCT-----------------------------GC-----AAGGGTATAAAAAGTTA---TT----CTACAAAAA---AATTTACCC-------ATTT-------------------------------------------------------------------------------------------------------------------ATACAAACT---TTTACAAGAGTTTT-------C-------AATTCTTATA-TT---------------------------------------------------------------GTCAGAAACTCTCACAAAATTT-----------------------------------------------------CATTCAAACAAATAAT---------------------------------------------------------------------------------------------------------------A----AA------------------------------TGCAT--------------------TATTTGTTACACTAATA------------AAAAC
droFic1 scf7180000449869:1247-1445 + TGA----TCAAGAATATATATACTTTATGGGGTCTGAGGTGTCTCCTTCACTGCGTTGCAAACTT-------CTGACT-GAAATTATAATACCCTC--TGCTC--------------------TGC-----AAGGGTATAAAAACTAC---TTG------------------------------------------------------------A----TC---------AATTCTT----TTCAAATTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGAATAT-----------------------ATTTATATATGTTT---------------TAAG-A---------------------------------------------ATGTATA-----G-TGAA------------TTTT------------------------------------------TAAAGAAAAAAG-----TTAAATATTT----TT------------------------------------------------
droEle1 scf7180000488991:19028-19279 - TGA----TCAAGAATATATATACTTTATAGGGTCGGAGATGTCTCCTTCACTGCGTTGCAAACTT-------CTGACT-GAAATTATAATACCCTCT---------------------------GC-----AAGGGTATAAAAATATT-A--CA--------AAGTAGAAA--AGA-----------------------------------------------------------T-AAAT----------------------------------------------------CAA----A------ATAATT---TTTTTTTA-----TT--T---T-------T---------------ATTGTTTCTATGT---GAGCTATA----------------------TG---ATATAGT-CGTCGG--ATTTTTATGAAATTT-----------------------------AAG-----------------------CCGTAAT-------------------------------------TCTGAATATT--------------------------------------------------------------------------------------T--------AACCAT----AACTATGT----GTGGAAGA-------------------ACTAAG------------AAGAA
droRho1 scf7180000778301:727-980 + TGA----TCAATAATATATATACTTTATAGGGTCGGAAACGCTTCCTTCTAGCTGTTACATACTT-------TTGCAC-GAATACAATATACCCTTT-TACTC--------------------AACGAGTAACGGGTATAAAAACTAT---CCT---------AACAGT----------------------------------------------------------------TTTA----AGCACATTT-------------------------------------GGAAAGGAA----TATTTTAAA--------------------ATCATG-----------------TTA--A---TAAC---------------------ATTTTATGTAGACATGCAATATGATTACATATG-TATG-------------------------------------------------------------------------------------------------------------------TGTTTTGTACACGACAGTTTTC----------------------------------------------------------------------------------------------CTAAATTTGT----CTAAAAGA-------------------AAA---------------ATAAA
droBia1 scf7180000297919:11784-12011 + TGA----TCAAGAATATAGATACATTATCGGGTCGGAAACGTCTCCTTTACTGCGTTGCAAA--------------------------ATACCCTCT---------------------------GC-----AAGGGTATAACAAGCCT---TTGTTGCTGGAAC-------------AAAAGACTATTT------GTTAAAACAACTGATTTCGTTTG---TTAAATCCGC----------TTT------ATTGCTGT--GTCCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGT-----CGTATATTGCTTAGTTATTA--------------------------CAAAAAAATC------------------GTTAAGAAAAGGTGG----TA---GGAATA----------------AACATA------------ACTAC
droTak1 scf7180000415396:436446-436665 - TGA----TCAAGAATATATATACTTTATGGGGTCGGAAACGCTTCCTTCTCCCTGTTACATACTT-------TTGCAC-GAATACAATATACCCTTT-TACTC--------------------TACGAGTAACGGGTATAAAAATATT---------------GAA--------------------------------------ACCTTTTATAA----ACT-ATACTTCA------------------------------------TT-----TATTTTAAATTTTTTATCCCA--------------------------------CAC----------------------------------------------------------------------------------------G-TTTT-------------------------------------------------------------------------------------------------------------------TGTTTCTTTCAAA---------AATGTTTAAT-----TCTATAGTTC--------------------------------------------------------------------------------------TGAGA-------------------TATGTG------------AAAAA
droEug1 scf7180000407361:4654-4883 + TGA----TCAAGAATATATATACTTTATAGGGTCGGAAACGCTTCCTTCTATCTGTTACATACTT-------TTCAAC-GAATCTAGTATACCCTTT-TACTC--------------------TACGAGTAACGGGTATAAAAATTGT---TAGT--ATACAC--------------ATTA-------TAAAATTGTACAATTATAC----------------------------------------------------------------------------------------------------------------GTAT---------------G-----T--------------AAATAT------------ATTTATTA----------------------ACTTTA------------------------------ATTATATGT---------------TATAATAA-----------------GGAAAAGAC------AAAAA--------------------------------------------------------------------------------------------------------------------AATA------------------ATAA----------------TAAAACA-------------------ATAA-T------------AAAAA
dm3 chr3LHet:1314696-1314943 + TGA----TCAAGAATATATATACCTTATATAGACGGAAACGCTTCCTTCTGCCTGTTACATACTT-------GTAAAC-GAATCTAGTATACCTTTT-TACTC--------------------TACCAGTAACGGGTATAACAAGACA------------------------------GAA-------TGCTATAGTCGAGCTTCTC-----------------------------------------------------------------------------------GAATGCGAA-----CTCGA-------------------------------AACTTG------ATCATTTTTAT---------------------------------------------------------------------------------------AG----GAT-----------ATCGATAGATATTGGGGAATAAA--------------ATAAGAAAAAATTTAAAAAAATTTCAAA-------------------------------------------------------------------------------------------------------------------------------------------AGTGTGGGCGTGA---------TTGGCT------------TAGCG
droSim2 x:20756346-20756540 - TGA----TCAAGAATATATATACTTTATATGGTCGAAAACGCTTCTTTCTGCATGTTACATACTT-------TTCAAC-GAATCTAGTACACCCTTT-TACTAATTGTAGTTGAAAAAGGATTAGA-----AAGTGTATATAATTATT---------------------------------------------------------------TTGT--------------------------------------------------------------------------------------------------------------------------T-------T------TTT--T---TTTC------------------------------------------------------------------------------CTTTTATAT-------------------------------------------------------------------------------------------------------------------------------------------TTTTATTACGTCTTTGTTGATTTCTCA----GAAA------------A--------AACCA--------------------------------------------------------------AATCA
droSec2 scaffold_162:20224-20444 + TGA----TTTA------------TATGTATAGTCGGAAACACTTCCTTCTGCCTGTTACATACTT-------TTCAAC-GAATCTCGTATACCCTTT-TACTC--------------------TACGAGTAAGGGGTATAACAACCAT-ACC-------------------------------------------------------------GATTGCG-----------------------------------------GCC--AATAA-------------------------TCAAA------A-----TAA-ATATATGGTACAA-------T-------T------TTT--C---TTTC------------------------------------------------------------------------------ATTATATGTTTAAAC-----------------------TTGCTGAATTAA-----------------------------------TTTCAGA-----------------------------------------------------------AGTTCGA----TT-------------TCCAAG----------------------------------TATGA--------------------------------TTTTG--------ATAAAATAA
droYak3 v2_chrUn_004:275049-275280 + TGA----TCAAGAATATATATACTTTATATGATCGGAAACGCTTCCTTCTGCCTGTTACATACTT-------TTCAAC-GAATCTAGTATACTCTTT-TACTC--------------------TACGAGTAACGGGTATAATAACCTT---CGA---------ATC----------------------------------------------------------------A------------------------------------AT-----AATTAGAAATTTATTAAACCAA----A------AAAAT----------------AG--------G-----T---------TATTTTTAATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATA---------AAT------TATTAA-----T--------TTATTGTTCGAAATGTAA-------------ATA----AA------------------------------TATTTTTCT-GATGAGA-------------------ACAACG------------AAAAC
droEre2 scaffold_4929:8783295-8783519 + TGATATATCAAGAATATATATACTTTATATGGTCGGAAATGTTTTCTTCTTCCTGTTACATACTT-------TTCAAC-GAATCTTTTTCAACCTTT-TACTC--------------------TATGAGTAACGGGTATAATTATGAT---------------GAA--------------------------------------ATCATC-AAAA----ACA-AA--------TCTA----CGCAAATTT--------------------------------------------------------------------------------------AA-------G------TTAAATTACA-------TATGT----------------------------------------------------------------------------------------------------------------------GATT---------------TATG-T---------------------------------------------TTACAGA-----G-TAA-------------TTTA-----------------------------------------CAAGAA------------------------------GAAA-------------------ATGATTCAATTTTTATGAATCAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
TGA----TCAAGGATATATATACTTTATGGGGTCTGCGATGATTCCTTCTGCCTTTTACATACTT-------CTC-AC-AAAACCATTATACCCTGATTTCCCATTTTC--------------AA------TGGGGCATAAAAAACTT---CAG---------AAAATTATTGGGCCA-------ATTT-------------------------------------------------------------------------------------------------------------------ATAAAAACT---TGTAACTG-----AT--TTTAT-------G------ATTATCTCCATAT------------ATTTTATA----------------------TCCTTACATATG-GGTC-------------------------------------------------------------------------------------------------------------------AGTTTCTTACGAG---------GA----------------------------------A----GCACAA-------------A---------------------------------TCAAATATGT----TTGGAAGA-------------------ATGATG------------AAGACSizeHit CountTotal NormTotalM046
Female-body
V041
Embryo
V049
Head
V056
Head
M060
Embryo
V110
Male-body
......................................................TTTACATACTT-------CTC-AC-AAAACC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.......................TTTATGGGGTCTGCGATGATT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.306600000
..................................TGCGATGATTCCTTCTGCCTTTTACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2660.171100000
...............................GTCTGCGATGATTCCTTCTGCCTTTTACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2960.171100000
................................................................................AAACCATTATACCCTGATTTCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000010
droVir3
TGA----TCAAGAATATATATACTTTATGGGGTCGGAAATGCTTCCTTCTGCCTGTTACATACATA----TTTTGCAC-AAATAAAATATACCCTTA-TACCCATTTTT--------------AATGGGTTCAGGGTATAATAAGCAC-----------------------------AGAA-------TA-------------------------------------------------------------------------------------------------------------------TAATTACT---GGTAATAA-----ATCATGTATGAAACTT---------TATCTTTGTGC------------AT----------------------------------------------------------------ATTATATAT---------------TATATGAA-----------------GAAA---------------------------------------------------------CAGTTTTC-----------------AA------------TAAA------------------------------------------A--------AAAAAAAAAAGAAAATAT----TATAAAAT-------------------------------------ATGATSizeHit CountTotal NormTotalM027
Male-body
M028
Head
M047
Female-body
M061
Embryo
SRR060654
Ovary
SRR060655
Testis
SRR060656
Ovary
SRR060657
Testis
SRR060658
Ovary
SRR060659
Testis
SRR060660
Ovary
SRR060661
Embryo
SRR060662
Embryo
SRR060663
Embryo
SRR060664
Male-body
SRR060665
Female-body
SRR060666
Male-body
SRR060667
Female-body
SRR060668
Male-body
SRR060669
Female-body
SRR060670
Testis
SRR060671
Male-body
SRR060672
Female-body
SRR060673
Ovary
SRR060674
Ovary
SRR060675
Ovary
SRR060676
Ovary
SRR060677
Ovary
SRR060678
Testis
SRR060679
Testis
SRR060680
Testis
SRR060681
Testis
SRR060682
Embryo
SRR060683
Testis
SRR060684
Embryo
SRR060685
Embryo
SRR060686
Embryo
SRR060687
Embryo
SRR060688
Ovary
SRR060689
Testis
SRR1106712
embryo_0-2h
SRR1106713
embryo_0-2h
SRR1106714
embryo_2-4h
SRR1106715
embryo_4-6h
SRR1106716
embryo_4-6h
SRR1106717
embryo_6-8h
SRR1106718
embryo_6-8h
SRR1106719
embryo_8-10h
SRR1106720
embryo_8-10h
SRR1106721
embryo_10-12h
SRR1106722
embryo_10-12h
SRR1106723
embryo_12-14h
SRR1106724
embryo_12-14h
SRR1106725
embryo_14-16h
SRR1106726
embryo_14-16h
SRR1106727
larvae
SRR1106728
larvae
SRR1106729
mixed whole adult body
SRR1106730
embryo_16-30h
V047
Embryo
V053
Head
V116
Male-body
GSM1528803
follicle cells
........CAAGAATATATATACTTTATGGGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.306000000000000000000000000060000000000000000000000000000000000000
.....................................................................................................CCATTTTT--------------AATGGGTTCAGGGTAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.153000000000000000000000000000000000000003000000000000000000000000
..............................................................................................TTA-TACCCATTTTT--------------AATGGGTTCAGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.102000000000000000000000000000020000000000000000000000000000000000
.................ATATACTTTATGGGGTCGGAAATG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.102000000000000000000000000000020000000000000000000000000000000000
.........................................................................TGCAC-AAATAAAATATACCCTTA-TACC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27180.061000000000000000000000000000001000000000000000000000000000000000
......................................ATGCTTCCTTCTGCCTGTTACATACATA----.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051000000000000000000000000000000001000000000000000000000000000000
........................TTATGGGGTCGGAAATGCTTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000010000000000000000000000000000000000000
..............TATATATACTTTATGGGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000000010000000000000000000000000000000000
...........GAATATATATACTTTATGGGGTCGGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000100000000000000000000000000000000000000
................TATATACTTTATGGGGTCGGAAATGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000000000100000000000000000000000000000
.....................................................................................................CCATTTTT--------------AATGGGTTCAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000001000000000000000000000000000000000000
TGA----TCAAGAATATATATACTTTATGGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000000100000000000000000000000000000000
.......TCAAGAATATATATACTTTATGGGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051001000000000000000000000000000000000000000000000000000000000000
.........................TATGGGGTCGGAAATGCTTCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000001000000000000000000000000000000000000000000000000000000000
.......................TTTATGGGGTCGGAAATGCTTCCTTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000000000000010000000000000000000000000000
.....................ACTTTATGGGGTCGGAAATGCTTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000000000000000000000000000000000000010
.................ATATACTTTATGGGGTCGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
...........................TGGGGTCGGAAATGCTTCCTTCTGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000001000000000000000000000000000000000000000000000000000000
..................TATACTTTATGGGGTCGGAAATG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000001000000000000000000000000000000000000
.GA----TCAAGAATATATATACTTTATGGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000000010000000000000000000000000000000000000
droGri2
TGA----TCAAGAATATAGATACTTTATGGGGTCGGAGATGCTTTCTTCTGTCTGTTACATACAT-------TTGCAC-AAAACCATTATACACTTTTTACTCATTTTT--------------AATGGGCTTAGGGTATAATAATATA-----------------------------------------------GTTGAAGTAATCGTTTTTAATTA---T-ATATTTTC----------TTT------ATATTTAT--ATTT------------------------ATTTATA---------------------TATGTTT---------------G-----T--------------A----------------C---TTATATTT----------------------ATTTAATGTGGGT----------------------------T---------------TATATCAA-----------------------TTGAAACAGAGAATAACTAACT------------------------------------------------------------------------------------------------------------------------------------------------------TAAGAGA-------------------ATGACT------------AAAACSizeHit CountTotal NormTotalM041
Female-body
V109
Male-body
No Reads
droWil2
TGA----TCAAGAATATATATACTTTGTGGGGTCGGAGATGCTTCCTTCTGCCTGTTACATACAT-------TTTGGC-GACTTTAATATACCATTT-CACCC--------------------TATGGGTGTATGGTATAAAAATTAA---TTG----------------------------------------------------------------TGG---------AATATT-----------------------------------------------------------------------------------------------------------------------------TATT------------------------------------------------------------------------------GTAATGTTTTAAATT-----------------------TTGTTGAATAGG--------------TTA-AAAC-AATTTAAGGGAGCTTCCAAAATCTGTTTTGCACAAA--------------------------------------------------------------------------------------A--------AACCACAATCAAATATAT----TT-----------------------------TG------------AACAASizeHit CountTotal NormTotalM020
Head
M045
Female-body
V117
Male-body
V118
Embryo
V119
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAC-AATTTAAGGGAGCTTCC..........................................................................................................................................................................................2112.00201010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATGTTTTAAATT-----------------------TTGTTGAATAGG--------------....................................................................................................................................................................................................................2611.00101000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAAAATCTGTTTTGCACAAA--------------------------------------------------------------------------------------A--------AACC....................................................................2711.00101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--------------TTA-AAAC-AATTTAAGGGAG...............................................................................................................................................................................................2011.00101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTTTTAAATT-----------------------TTGTTGAA......................................................................................................................................................................................................................................2111.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACAAA--------------------------------------------------------------------------------------A--------AACCACAATCAAATA.........................................................2311.00101000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCAAAATCTGTTTTGCACA.........................................................................................................................................................................2111.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAGG--------------TTA-AAAC-AATTTAAG...................................................................................................................................................................................................2111.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATT-----------------------TTGTTGAATAGG--------------TTA-................................................................................................................................................................................................................2111.00100010
.........................................................................................................................................................................................................................................................................................................................................................................TATT------------------------------------------------------------------------------GTAATGTTTTAAATT-----------------------TTGTTGAA......................................................................................................................................................................................................................................2711.00100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTTTTGCACAAA--------------------------------------------------------------------------------------A--------AACCACAAT...............................................................2411.00101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTTTTGCACAAA--------------------------------------------------------------------------------------A--------AACCAC..................................................................2111.00101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATGTTTTAAATT-----------------------TTGTTGA.......................................................................................................................................................................................................................................2111.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGCACAAA--------------------------------------------------------------------------------------A--------AACCACAATCAA............................................................2311.00101000
......................................ATGCTTCCTTCTGCCTGTTAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.10202000
....................................................CTGTTACATACAT-------TTTGGC-GAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
dp5
TGA----TCAAGAATATATATACTTTATGGGGTTGGAAACGATTCCTTCTGGACGTTACACACATCCACTTTTACCAC-AAATCTAATATACCCCAA-TACTCATT------------------TTGAGTATCGGGTATAAAAAGAACTT-CT------------------------------------------------------------AACTAAG-----------------------------------------GCT--T-----------------TTATTCGCACAAAAA-----ATAAAAACC---TATGACT---------------G-----T---------AGTTTTAGAGC-----------------------------------------------A---------------------------------------------CATATATATTAGTATGT-----------------GGCACATGC-------------------------------------------------------------A----------------------------------A----GCA-----------------------CATA-----------------------CTAAATTTAG----TCGAAAGT-------------------ATG-CC------------AAAACSizeHit CountTotal NormTotalM022
Male-body
M040
Female-body
M059
Embryo
M062
Head
V043
Embryo
V051
Head
V112
Male-body
SRR902010
Ovary
SRR902011
Testis
SRR902012
CNS imaginal disc
................................TTGGAAACGATTCCTTCTGGACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2362.001201200000000
................................TTGGAAACGATTCCTTCTGGACGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2450.8040400000000
...........................................TCCTTCTGGACGTTACACACATCCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.751501500000000
........................................................................TACCAC-AAATCTAATATACCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.701401400000000
.....................................................................................................TCATT------------------TTGAGTATCGGGTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.601201200000000
.......................................CGATTCCTTCTGGACGTTACACACATCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.4590900000000
.GA----TCAAGAATATATATACTTTATGGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.3570000000700
................................TTGGAAACGATTCCTTCTGGAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2270.2920200000000
...............................GTTGGAAACGATTCCTTCTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.2920200000000
................................TTGGAAACGATTCCTTCTGGACGTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2550.2010100000000
............................GGGGTTGGAAACGATTCCTTCTGGAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2660.1710100000000
...........................TGGGGTTGGAAACGATTCCTTCTGGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2660.1710100000000
...........................TGGGGTTGGAAACGATTCCTTCTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2560.1710100000000
..................TATACTTTATGGGGTTGGAAACGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.1410100000000
....................TACTTTATGGGGTTGGAAACGATT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.1410100000000
.................................TGGAAACGATTCCTTCTGGACGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2370.1410100000000
.......TCAAGAATATATATACTTTATGGGGTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27150.1320020000000
................................TTGGAAACGATTCCTTCTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2080.1310000000010
.................................TGGAAACGATTCCTTCTGGACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2280.1310100000000
.......................TTTATGGGGTTGGAAACGATT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.1110100000000
.......................TTTATGGGGTTGGAAACGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1990.1110000001000
.................................TGGAAACGATTCCTTCTGGAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.1110100000000
..A----TCAAGAATATATATACTTTATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.1020200000000
.....................................................................................................TCATT------------------TTGAGTATCGGGTATAAAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1020000000020
.......................................................................TTACCAC-AAATCTAATATACCCCAA-T............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.1020000000020
....................TACTTTATGGGGTTGGAAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20140.0710000001000
..................TATACTTTATGGGGTTGGAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21150.0710100000000
......................CTTTATGGGGTTGGAAACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19150.0710000001000
.............ATATATATACTTTATGGGGTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21150.0710000000010
..........AGAATATATATACTTTATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510001000000
..................................................................CACTTTTACCAC-AAATCTAATATACC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510100000000
......................................................GTTACACACATCCACTTTTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
......................................................................TTTACCAC-AAATCTAATATACCCCAA-T............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510100000000
........CAAGAATATATATACTTTATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
........................................................................................................TT------------------TTGAGTATCGGGTATAAAAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
....................................................................................TAATATACCCCAA-TACTCATT------------------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000010
droPer2
TGA----TCATGAATATATATACTTTATGGGGTCGGAAACGATTCCTTCTGGACGTTACACACATCGACTTTTACCACAAAATCTAATATACCCCAA-TACTCATT------------------TTGAGTATCGAGTATAAAAATACA-T-C-------------------------------------------------------------AATAGAG-----------------------------------------GCA--A-----------------TGATTTAGACAAAAA-----AAAAAAA-------AGTAGCGCACAAT--TTTAT-------T------TTT-TCCTCA-------AATATAAC---TTATAGCT----------------------ATGGAATGG-A---------------------------------------------------------------------------------------------------------------------------------------------------------G-TGAA------------TTTGCTCGA----CAA-------------ATA----AA------------------------------TA----------------------------------ATTTTA------------AAGACSizeHit CountTotal NormTotalM021
Embryo
M042
Female-body
V042
Embryo
V050
Head
V057
Head
V111
Male-body
..................................................................................TCTAATATACCCCAA-TACTCATT------------------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.153030000
.....................................................................................AATATACCCCAA-TACTCATT------------------TTGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.102020000
droAna3
TGA----TCAAGAATATATATACTTTATAGGGTCGGAGATGTCTCCTTCACTGCGTTGCACACTT-------TTGACC-AAAATTATAATACGCTCT---------------------------GC-----AAGGGTATAAAAAACAA---------------GAAAGGAA--AGC-----------------------------------------------------------T-AACT-----------TCAAGCGGAGCCGAAGTTGATATACCCT---TGCAGTTAAGCA--------------------------------GAAG--CTTATG-----T---------TATTTTCATAT------------AT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATC---------GGA------TCCTAT-----A--------TATTTGTCCGATCCTTATAAGAATTTCACCATCAAT----------------------------------AAAATTTCT-AATAAAA-------------------ATATTG------------GAAACSizeHit CountTotal NormTotalM044
Female-body
M058
Embryo
V039
Embryo
V055
Head
V105
Male-body
V106
Head
...............................................TCACTGCGTTGCACACTT-------TTGACC-................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24204.40880880000
...........................................TCCTTCACTGCGTTGCACACTT-------TTGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.95190190000
.......................................TGTCTCCTTCACTGCGTTGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.50100000010
....................TACTTTATAGGGTCGGAGATGTCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.459090000
.........................................TCTCCTTCACTGCGTTGCACACTT-------TTGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.306600000
.........................................................................................................................................................................AA--AGC-----------------------------------------------------------T-AACT-----------TCAAGCGGAGCCGAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.204400000
........................................GTCTCCTTCACTGCGTTGCACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.204400000
...............................................................................................................................................................................................................................................CT-----------TCAAGCGGAGCCGAAGTTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.153300000
..................TATACTTTATAGGGTCGGAGATGTCTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.153300000
..............................................................................................................................................................................GC-----------------------------------------------------------T-AACT-----------TCAAGCGGAGCCGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102000020
............................................................CACTT-------TTGACC-AAAATTATAATACGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26190.051010000
.........................................................................................................................................................................AA--AGC-----------------------------------------------------------T-AACT-----------TCAAGCGGAGCCGAAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051010000
.................................................................................................................................................................................................................................................................CGGAGCCGAAGTTGATATACCCT---T...................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051010000
..............................................................................................................................................................................GC-----------------------------------------------------------T-AACT-----------TCAAGCGGAGCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000001
..................................................................................................................................................................................................................................................................................TACCCT---TGCAGTTAAGCA--------------------------------GAAG--C.................................................................................................................................................................................................................................................................................................................................................................................................23200.051010000
..............................................................................................................................................................................GC-----------------------------------------------------------T-AACT-----------TCAAGCGGAGCCGAAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051010000
........................................................................................................................................................................GAA--AGC-----------------------------------------------------------T-AACT-----------TCAAGCGGAGCCGAAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051000010
....................................................................................................................................AGGGTATAAAAAACAA---------------GAAAGGAA--AGC-----------------------------------------------------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051010000
...............................................................................................................................................................................................................................................................AGCGGAGCCGAAGTTGATATACCCT---TG..................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051100000
droBip1
TGA----TCAAGAATATATATACTTTATAGGGTCGGAGATGTCTCCTTCACTGCGTTGCACACTT-------TTGACC-AAAATTATAATACCCTCT---------------------------GC-----AAGGGTATAAAAATCAA---------------AAAATAAA--TG---------------------------------A--------------------------T-T-CT---------TATCATGT--GGCCTAAGTGG-------------------------CCTAA------A-----TTA-TAATGTGATTTAA-------T-------ATTTATTTTA-TGGTGA-------AATATTAT---ATTTAGATATTATTTAGAGAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G----GCACA-------------TACATA--TATGATTTAAAGGAG------------------------------AAAA-------------------ATGTTT------------AAAATSizeHit CountTotal NormTotal
No Reads
droKik1
TGA----TCAAGAATATATATACTTTATAGGGTCGGAAACGTCTCCTTCACTGCGTTGCAAACTT-------CTGACT-GAAATTATAATACCCT-----------------------------GC-----AAGGGTATAAAAAGTTA---TT----CTACAAAAA---AATTTACCC-------ATTT-------------------------------------------------------------------------------------------------------------------ATACAAACT---TTTACAAGAGTTTT-------C-------AATTCTTATA-TT---------------------------------------------------------------GTCAGAAACTCTCACAAAATTT-----------------------------------------------------CATTCAAACAAATAAT---------------------------------------------------------------------------------------------------------------A----AA------------------------------TGCAT--------------------TATTTGTTACACTAATA------------AAAACSizeHit CountTotal NormTotal
No Reads
droFic1
TGA----TCAAGAATATATATACTTTATGGGGTCTGAGGTGTCTCCTTCACTGCGTTGCAAACTT-------CTGACT-GAAATTATAATACCCTC--TGCTC--------------------TGC-----AAGGGTATAAAAACTAC---TTG------------------------------------------------------------A----TC---------AATTCTT----TTCAAATTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGAATAT-----------------------ATTTATATATGTTT---------------TAAG-A---------------------------------------------ATGTATA-----G-TGAA------------TTTT------------------------------------------TAAAGAAAAAAG-----TTAAATATTT----TT------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TGA----TCAAGAATATATATACTTTATAGGGTCGGAGATGTCTCCTTCACTGCGTTGCAAACTT-------CTGACT-GAAATTATAATACCCTCT---------------------------GC-----AAGGGTATAAAAATATT-A--CA--------AAGTAGAAA--AGA-----------------------------------------------------------T-AAAT----------------------------------------------------CAA----A------ATAATT---TTTTTTTA-----TT--T---T-------T---------------ATTGTTTCTATGT---GAGCTATA----------------------TG---ATATAGT-CGTCGG--ATTTTTATGAAATTT-----------------------------AAG-----------------------CCGTAAT-------------------------------------TCTGAATATT--------------------------------------------------------------------------------------T--------AACCAT----AACTATGT----GTGGAAGA-------------------ACTAAG------------AAGAASizeHit CountTotal NormTotal
No Reads
droRho1
TGA----TCAATAATATATATACTTTATAGGGTCGGAAACGCTTCCTTCTAGCTGTTACATACTT-------TTGCAC-GAATACAATATACCCTTT-TACTC--------------------AACGAGTAACGGGTATAAAAACTAT---CCT---------AACAGT----------------------------------------------------------------TTTA----AGCACATTT-------------------------------------GGAAAGGAA----TATTTTAAA--------------------ATCATG-----------------TTA--A---TAAC---------------------ATTTTATGTAGACATGCAATATGATTACATATG-TATG-------------------------------------------------------------------------------------------------------------------TGTTTTGTACACGACAGTTTTC----------------------------------------------------------------------------------------------CTAAATTTGT----CTAAAAGA-------------------AAA---------------ATAAASizeHit CountTotal NormTotal
No Reads
droBia1
TGA----TCAAGAATATAGATACATTATCGGGTCGGAAACGTCTCCTTTACTGCGTTGCAAA--------------------------ATACCCTCT---------------------------GC-----AAGGGTATAACAAGCCT---TTGTTGCTGGAAC-------------AAAAGACTATTT------GTTAAAACAACTGATTTCGTTTG---TTAAATCCGC----------TTT------ATTGCTGT--GTCCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGT-----CGTATATTGCTTAGTTATTA--------------------------CAAAAAAATC------------------GTTAAGAAAAGGTGG----TA---GGAATA----------------AACATA------------ACTACSizeHit CountTotal NormTotal
No Reads
droTak1
TGA----TCAAGAATATATATACTTTATGGGGTCGGAAACGCTTCCTTCTCCCTGTTACATACTT-------TTGCAC-GAATACAATATACCCTTT-TACTC--------------------TACGAGTAACGGGTATAAAAATATT---------------GAA--------------------------------------ACCTTTTATAA----ACT-ATACTTCA------------------------------------TT-----TATTTTAAATTTTTTATCCCA--------------------------------CAC----------------------------------------------------------------------------------------G-TTTT-------------------------------------------------------------------------------------------------------------------TGTTTCTTTCAAA---------AATGTTTAAT-----TCTATAGTTC--------------------------------------------------------------------------------------TGAGA-------------------TATGTG------------AAAAASizeHit CountTotal NormTotal
No Reads
droEug1
TGA----TCAAGAATATATATACTTTATAGGGTCGGAAACGCTTCCTTCTATCTGTTACATACTT-------TTCAAC-GAATCTAGTATACCCTTT-TACTC--------------------TACGAGTAACGGGTATAAAAATTGT---TAGT--ATACAC--------------ATTA-------TAAAATTGTACAATTATAC----------------------------------------------------------------------------------------------------------------GTAT---------------G-----T--------------AAATAT------------ATTTATTA----------------------ACTTTA------------------------------ATTATATGT---------------TATAATAA-----------------GGAAAAGAC------AAAAA--------------------------------------------------------------------------------------------------------------------AATA------------------ATAA----------------TAAAACA-------------------ATAA-T------------AAAAASizeHit CountTotal NormTotal
No Reads
dm3
TGA----TCAAGAATATATATACCTTATATAGACGGAAACGCTTCCTTCTGCCTGTTACATACTT-------GTAAAC-GAATCTAGTATACCTTTT-TACTC--------------------TACCAGTAACGGGTATAACAAGACA------------------------------GAA-------TGCTATAGTCGAGCTTCTC-----------------------------------------------------------------------------------GAATGCGAA-----CTCGA-------------------------------AACTTG------ATCATTTTTAT---------------------------------------------------------------------------------------AG----GAT-----------ATCGATAGATATTGGGGAATAAA--------------ATAAGAAAAAATTTAAAAAAATTTCAAA-------------------------------------------------------------------------------------------------------------------------------------------AGTGTGGGCGTGA---------TTGGCT------------TAGCGSizeHit CountTotal NormTotalGSM154618
Ovary
GSM154620
Ovary
GSM154621
Ovary
GSM154622
Ovary
GSM180328
Head
GSM180329
Mixed-body
GSM180330
Embryo
GSM180331
Embryo
GSM180332
Embryo
GSM180333
Embryo
GSM180334
Larvae
GSM180335
Disc
GSM180336
Pupae
GSM180337
S2
GSM231091
Ovary
GSM239041
Head
GSM239050
Head
GSM239051
S2
GSM239052
S2
GSM246084
Head
GSM266765
S2
GSM280082
Ovary
GSM280083
Ovary
GSM280084
Ovary
GSM280085
Testis
GSM280086
Ovary
GSM280087
S2-NP
GSM280088
S2-NP
GSM312995
Head
GSM313160
Head
GSM313161
Head
GSM313162
Head
GSM313163
Head
GSM313164
Head
GSM313165
Head
GSM343287
Embryo
GSM379050
Ovary
GSM379051
Ovary
GSM379052
Ovary
GSM379053
Ovary
GSM379054
Ovary
GSM379055
Ovary
GSM379056
Ovary
GSM379057
Ovary
GSM379058
Ovary
GSM379059
Ovary
GSM379060
Ovary
GSM379061
Ovary
GSM379062
Ovary
GSM379063
Ovary
GSM379064
Ovary
GSM379065
Ovary
GSM379066
Ovary
GSM379067
Ovary
GSM424739
S2
GSM424740
S2
GSM424741
S2
GSM467729
Female-body
GSM467730
Female-body
GSM467731
Female-body
M002
CS
M003
Male-body
M004
Male-body
M005
ML-DmD32
M006
ML-DmD32
M029
OSC
M030
OSC
M031
OSC
M032
S2-R+
M033
S2-R+
M034
S2-R+
M035
S2-R+
M036
S2-R+
M037
S2-R+
M038
S2-R+
M039
S2-R+
M048
S2-R+
OSS2
OSS
OSS6
OSS
OSS7
OSS
OSS8
OSS
S1
Head
S10
Embryo
S11
Embryo
S12
Embryo
S13
Embryo
S14
Embryo
S15
S2-GMR
S16
Kc
S17
Larvae
S18
Larvae
S19
Pupae
S2
Head
S20
Pupae
S21
Disc
S22
Head
S23
Female-body
S24
Male-body
S25
Larvae
S26
Larvae
S27
Pupae
S28
Pupae
S29
Head
S3
Male-body
S30
S2-GMR
S31
S2
S32
S2
S33
Kc
S34
Kc
S35
Kc
S4
Female-body
S5
Disc
S6
Embryo
S7
Embryo
S8
S2
S9
Embryo
SRR001337
Head
SRR001338
Head
SRR001339
Head
SRR001340
Head
SRR001341
Head
SRR001342
Head
SRR001343
Head
SRR001344
Head
SRR001345
Head
SRR001346
Head
SRR001347
Head
SRR001348
Head
SRR001349
Head
SRR001664
Head
SRR010951
Ovary
SRR010952
Ovary
SRR010953
Ovary
SRR010954
Ovary
SRR010955
Ovary
SRR010956
Ovary
SRR010957
Ovary
SRR010958
Ovary
SRR010959
Ovary
SRR010960
Ovary
SRR014268
Embryo
SRR014269
Embryo
SRR014270
Embryo
SRR014271
Embryo
SRR014272
Embryo
SRR014273
Ovary
SRR014274
Ovary
SRR014275
Ovary
SRR014276
Ovary
SRR014277
Ovary
SRR014278
Ovary
SRR014279
Ovary
SRR014280
Ovary
SRR014281
Ovary
SRR014282
Ovary
SRR023197
S2
SRR023399
S2
SRR023400
S2
SRR023402
S2
SRR023407
S2
SRR029028
S2
SRR029029
S2
SRR029030
S2
SRR029031
S2
SRR029032
S2
SRR029033
S2
SRR029608
Head
SRR029633
Head
SRR030145
gb3
SRR031692
Head
SRR031693
Head
SRR031694
Head
SRR031696
Head
SRR031697
Head
SRR031698
Head
SRR031699
Head
SRR031700
Head
SRR031701
Head
SRR031702
Head
SRR031703
Head
SRR031704
Head
SRR032092
S2
SRR032093
S2
SRR032094
S2
SRR032095
S2-NP
SRR032096
S2-NP
SRR032152
Head
SRR060643
Testis
SRR060644
Ovary
SRR060645
Testis
SRR060646
Ovary
SRR060647
Ovary
SRR060648
Ovary
SRR060649
Ovary
SRR060650
Testis
SRR060651
Ovary
SRR060652
Testis
SRR060653
Ovary
SRR065151
Ovary
SRR065152
Ovary
SRR065153
Ovary
SRR065154
Ovary
SRR065155
Ovary
SRR065800
Ovary
SRR065801
Ovary
SRR065802
Ovary
SRR065803
Ovary
SRR065804
Ovary
SRR065805
Ovary
SRR065806
Ovary
SRR065807
Ovary
SRR097865
S2-NP
SRR097866
S2-NP
SRR097867
S2-NP
SRR298536
Ovary
SRR298537
Ovary
SRR298711
Ovary
SRR298712
Ovary
SRR317110
Ovary
SRR317111
Ovary
SRR317112
Ovary
SRR317113
Ovary
SRR317114
Ovary
SRR317115
Ovary
SRR317116
Ovary
SRR317117
Ovary
SRR341115
S2
SRR341116
S2
SRR341117
S2
SRR341118
S2
SRR351332
Mixed-body
SRR351333
Mixed-body
T004
OSC
T005
CME-L1
V001
Embryo
V002
Embryo
V003
S2
V006
Female-body
V007
Head
V008
S2
V009
CME-L1
V010
ML-DmD20-C5
V011
Sg4
V012
Male-body
V013
Head
V014
DTT
V015
DreRFHV
V018
Kc167
V019
GM2
V020
S2-R+
V021
ML-DmD21
V022
ML-DmD32
V023
Head
V024
Kc167
V025
S2-R+
V026
1182-2H
V027
ML-DmD21
V028
CME-W1-Cl.8+
V029
ML-DmD9
V030
ML-DmD8
V031
GM2
V032
S1
V033
CME-W1-Cl.8+
V034
ML-DmD16-C3
V035
ML-DmD32
V036
ML-DmD20-C5
V037
S2
V038
S2
V063
Ovary
V0632
Ovary
V064
Ovary
V0642
Ovary
V065
Ovary
V0652
Ovary
V066
Ovary
V0662
Ovary
V067
S2-NP
V073
mbn2
V074
S3
V075
ML-DmBG1-C1
V076
ML-DmBG3-C2
V077
Head
V078
Head
V079
Head
V080
Head
V081
Embryo
V082
Embryo
V083
Male-body
V084
Female-body
V085
CME-W2
V086
Female-body
V088
Ovary
V0882
Ovary
V089
Ovary
V0892
Ovary
V090
Male-body
V091
fGS/OSS
V092
Male-body
V093
Male-body
V094
S2-R+
V095
S2-R+
V096
Ovary
V097
Ovary
V098
Ovary
V125
ML-DmD9
V126
CME-L1
V127
G2
V128
S3
V129
ML-DmBG1-C1
V130
ML-DmBG3-C2
V131
ML-DmD16-C3
V132
ML-DmD32
V133
Sg4
V134
ML-DmD8
V135
CME-W2
V136
Male-body
V137
Head
V138
Male-body
V139
Female-body
V140
Female-body
V141
Female-body
V142
Female-body
V144
OSC
V145
S2
V146
S1
V147
1182-2H
V148
mbn2
GSM1528798
follicle cells
........................TTATATAGACGGAAACGCTTCCTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24221.50430000000000000000000000100000000000001000300020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021001012210131000000000000000000000000000000000020001000000000001000000000010000000000000000001000000000000000000000000000000000000000000000000000000011000000000100000000000000001533000000
........................TTATATAGACGGAAACGCTTCCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23221.004200000000000000000000000000000000000000001010001000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122010013111200000000000000000000000000000000000000000010100000001000000000000000000000000000000000000000000000000000000000000000000000000000000001000001201000000200000000000000000130000000
........................TTATATAGACGGAAACGCTTCCTTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2526.00120000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000102110000000000000000000000000000000000000000000000000000000000000001001100000000010000000000000000100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAATTTCAAA-------------------------------------------------------------------------------------------------------------------------------------------AGTGTGGGCG...................................2134.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104000000100000000000000000000000000000000000000010000000000001000000000000000000000000000000000000000000000000000000000000000001100010000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTTCAAA-------------------------------------------------------------------------------------------------------------------------------------------AGTGTGGGCGT..................................2162.83170000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000060100000000000000000000000000000000000100000000000001000000000000000000000000000000000000000000000000000000000000000000300010000000000000000000000000100000000000000000000000000
...........................TATAGACGGAAACGCTTCCTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2132.3370000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000200000000000000000000000000000010000000000000000011000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCAAA-------------------------------------------------------------------------------------------------------------------------------------------AGTGTGGGCGTGA---------.......................2122.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000100000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAAA-------------------------------------------------------------------------------------------------------------------------------------------AGTGTGGGCGTGA---------TT.....................2122.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000
..........................ATATAGACGGAAACGCTTCCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2132.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000001000000000100000000000000000000000000000020000000000000000100000000
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droSim2
TGA----TCAAGAATATATATACTTTATATGGTCGAAAACGCTTCTTTCTGCATGTTACATACTT-------TTCAAC-GAATCTAGTACACCCTTT-TACTAATTGTAGTTGAAAAAGGATTAGA-----AAGTGTATATAATTATT---------------------------------------------------------------TTGT--------------------------------------------------------------------------------------------------------------------------T-------T------TTT--T---TTTC------------------------------------------------------------------------------CTTTTATAT-------------------------------------------------------------------------------------------------------------------------------------------TTTTATTACGTCTTTGTTGATTTCTCA----GAAA------------A--------AACCA--------------------------------------------------------------AATCASizeHit CountTotal NormTotalM023
Head
M024
Male-body
M025
Embryo
M053
Female-body
O001
Testis
O002
Head
SRR553485
Ovary
SRR553486
Ovary
SRR553487
Ovary
SRR553488
Ovary
SRR618934
Ovary
V044
Embryo
SRR902008
Ovary
SRR902009
Testis
SRR1275487
Male larvae
SRR1275485
Male prepupae
SRR1275483
Male prepupae
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................................................................T-------TTCAAC-GAATCTAGTACACCCTTT-TAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.00200100010000000000
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..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTACGTCTTTGTTGATTTCTCA----GA...............................................................................................2611.00100100000000000000
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..................................................................................................TACTAATTGTAGTTGAAAAAGGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000000000
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....................TACTTTATATGGTCGAAAACGCTTCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
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.........................TATATGGTCGAAAACGCTTCTTTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000100000000
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.........................................................................................................TGTAGTTGAAAAAGGATTAGA-----AAGTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000000010000
.....................................................................................................TAATTGTAGTTGAAAAAGGATTAGA-----A...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000100000000
.............................................TTTCTGCATGTTACATACTT-------TTCAAC-GA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-------------------------------------------------------------------------------------------------------------------------------------------TTTTATTACGTCTTTGTTGATT..........................................................................................................2311.00100000010000000000
..................TATACTTTATATGGTCGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19130.8511000001100000000000
.............................................TTTCTGCATGTTACATACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1920.50100000000100000000
.......................TTTATATGGTCGAAAACGCTTCTTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.50100000000001000000
................TATATACTTTATATGGTCGAAAACGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2680.50400000002100001000
..........................................TTCTTTCTGCATGTTACATACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.50100000010000000000
................................................................T-------TTCAAC-GAATCTAGTACACCCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2320.50100000000100000000
....................TACTTTATATGGTCGAAAACGCTTC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2560.50300000010200000000
...............ATATATACTTTATATGGTCGAAAACGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2770.43300000021000000000
.................ATATACTTTATATGGTCGAAAACGCTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2770.43300000020100000000
.............ATATATATACTTTATATGGTCGAAAACGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2950.40200000002000000000
..................TATACTTTATATGGTCGAAAACGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2580.38300000001100010000
................................................CTGCATGTTACATACTT-------TTCAAC-GAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2660.33200000010100000000
.................................................TGCATGTTACATACTT-------TTCAAC-GA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2460.33200000011000000000
..............TATATATACTTTATATGGTCGAAAACGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2960.33200000000200000000
.........................................................................TCAAC-GAATCTAGTACACCCTTT-TAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2630.33100000000010000000
...............................................TCTGCATGTTACATACTT-------TTCAAC-GAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2760.33200000020000000000
.......................TTTATATGGTCGAAAACGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20130.23320000000001000000
....................TACTTTATATGGTCGAAAACGCTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2490.22200000010100000000
...............ATATATACTTTATATGGTCGAAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2490.22200000010100000000
.................ATATACTTTATATGGTCGAAAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2390.22200000010100000000
....................................................ATGTTACATACTT-------TTCAAC-GAATCTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2650.20100000000010000000
....................TACTTTATATGGTCGAAAACGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22100.20200000000110000000
.....................................................TGTTACATACTT-------TTCAAC-GAAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.20400000000040000000
..............................................TTCTGCATGTTACATACTT-------TTCAAC-GA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2760.17100000010000000000
..............................................TTCTGCATGTTACATACTT-------TTCAAC-GAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2860.17100000000010000000
................................................CTGCATGTTACATACTT-------TTCAAC-GAAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2760.17100000010000000000
..............TATATATACTTTATATGGTCGAAAACGCTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3060.17100000000100000000
.................................................TGCATGTTACATACTT-------TTCAAC-GAATC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2760.17100000010000000000
........................................................TACATACTT-------TTCAAC-GAATCTAGTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.15300000001200000000
.................ATATACTTTATATGGTCGAAAACGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.15300000010200000000
................TATATACTTTATATGGTCGAAAACGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2770.14100000000100000000
................................................CTGCATGTTACATACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1670.14100000010000000000
.............ATATATATACTTTATATGGTCGAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2570.14100000010000000000
...............ATATATACTTTATATGGTCGAAAACGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2870.14100000000100000000
...................................................CATGTTACATACTT-------TTCAAC-GAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2370.14100000000010000000
.............ATATATATACTTTATATGGTCGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2380.13100000000000001000
...............ATATATACTTTATATGGTCGAAAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2580.13100000000100000000
..................TATACTTTATATGGTCGAAAACGCTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2680.13100000001000000000
.............ATATATATACTTTATATGGTCGAAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2590.11100000010000000000
.....................................................TGTTACATACTT-------TTCAAC-GAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.10200000020000000000
.................ATATACTTTATATGGTCGAAAACGCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26110.09100100000000000000
................TATATACTTTATATGGTCGAAAACGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26130.08100000010000000000
.......................TTTATATGGTCGAAAACGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19140.07100000000001000000
.............ATATATATACTTTATATGGTCGATT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25150.07100000000000010000
.........................TATATGGTCGAAAACGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18160.06100000000001000000
..........................ATATGGTCGAAAACGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17180.06100000000001000000
........................................................TACATACTT-------TTCAAC-GAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100000000010000000
............................................................TACTT-------TTCAAC-GAATCTAGTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100000000001000000
.........................TATATGGTCGAAAACGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17200.05100000000001000000
.....................................................TGTTACATACTT-------TTCAAC-GAATCTA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100000000010000000
.....................................................TGTTACATACTT-------TTCAAC-GAATCTAGTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05100000001000000000
..........................ATATGGTCGAAAACGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16200.05100000010000000000
droSec2
TGA----TTTA------------TATGTATAGTCGGAAACACTTCCTTCTGCCTGTTACATACTT-------TTCAAC-GAATCTCGTATACCCTTT-TACTC--------------------TACGAGTAAGGGGTATAACAACCAT-ACC-------------------------------------------------------------GATTGCG-----------------------------------------GCC--AATAA-------------------------TCAAA------A-----TAA-ATATATGGTACAA-------T-------T------TTT--C---TTTC------------------------------------------------------------------------------ATTATATGTTTAAAC-----------------------TTGCTGAATTAA-----------------------------------TTTCAGA-----------------------------------------------------------AGTTCGA----TT-------------TCCAAG----------------------------------TATGA--------------------------------TTTTG--------ATAAAATAASizeHit CountTotal NormTotalM054
Female-body
V113
Male-body
V114
Embryo
V115
Head
................................................................T-------TTCAAC-GAATCTCGTATACCCTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24203.8076630121
................................................................T-------TTCAAC-GAATCTCGTATACCCTTT-T............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.651313000
................................................................T-------TTCAAC-GAATCTCGTATACCCTTT-.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.3570007
................................................................T-------TTCAAC-GAATCTCGTATACCCTTT-TA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.2044000
..................................................................................................TACTC--------------------TACGAGTAAGGGGTATAACAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.2044000
.....................................................................................................TC--------------------TACGAGTAAGGGGTATAACAACCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.1532100
.............................................................................................................................................................................................................................................................................................................................ATATATGGTACAA-------T-------T------TTT--C---TTTC------------------------------------------------------------------------------A...................................................................................................................................................................................................................................................................................24200.1533000
.............................................................................................................................................................................................................................................................................................................................ATATATGGTACAA-------T-------T------TTT--C---TTTC------------------------------------------------------------------------------ATT.................................................................................................................................................................................................................................................................................26200.1022000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGA-----------------------------------------------------------AGTTCGA----TT-------------TCCAAG----------------------------------TATGA--------------------------------TT....................27200.1020020
................................................................T-------TTCAAC-GAATCTCGTATACCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1020020
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAAG----------------------------------TATGA--------------------------------TTTTG--------ATAAAATA.24200.1020011
...................................................................................................................................................T-ACC-------------------------------------------------------------GATTGCG-----------------------------------------GCC--AATAA-------------------------TC.....................................................................................................................................................................................................................................................................................................................................................................................................................................21120.0810010
.................................................................................................................................TAAGGGGTATAACAACCAT-ACC-------------------------------------------------------------GAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25120.0811000
..................................................................................................................................................AT-ACC-------------------------------------------------------------GATTGCG-----------------------------------------GCC--AATAA-------------------------TCAAA------A-----......................................................................................................................................................................................................................................................................................................................................................................................................................26120.0811000
...................................................................................................................................................T-ACC-------------------------------------------------------------GATTGCG-----------------------------------------GCC--AATAA-------------------------TCAAA------A-----TA....................................................................................................................................................................................................................................................................................................................................................................................................................27120.0810010
.........................................................................TCAAC-GAATCTCGTATACCCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0511000
...........................................................................................................................TACGAGTAAGGGGTATAACAACCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510010
........................ATGTATAGTCGGAAACACTTCCTTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510010
.............................TAGTCGGAAACACTTCCTTCTGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0511000
................................................................T-------TTCAAC-GAATCTCGTATACCCTTT-TACT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.0511000
...................................................................................................ACTC--------------------TACGAGTAAGGGGTATAACAACCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.0511000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTGAATTAA-----------------------------------TTTCAGA-----------------------------------------------------------AGTTCGA----TT-------------...................................................................................................27200.0511000
.......................TATGTATAGTCGGAAACACTTCCTTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0511000
......................................................GTTACATACTT-------TTCAAC-GAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0511000
.......................TATGTATAGTCGGAAACACTTCCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510010
........................ATGTATAGTCGGAAACACTTCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0511000
......................................ACACTTCCTTCTGCCTGTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0511000
droYak3
TGA----TCAAGAATATATATACTTTATATGATCGGAAACGCTTCCTTCTGCCTGTTACATACTT-------TTCAAC-GAATCTAGTATACTCTTT-TACTC--------------------TACGAGTAACGGGTATAATAACCTT---CGA---------ATC----------------------------------------------------------------A------------------------------------AT-----AATTAGAAATTTATTAAACCAA----A------AAAAT----------------AG--------G-----T---------TATTTTTAATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATA---------AAT------TATTAA-----T--------TTATTGTTCGAAATGTAA-------------ATA----AA------------------------------TATTTTTCT-GATGAGA-------------------ACAACG------------AAAACSizeHit CountTotal NormTotalM026
Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
GSM1528802
follicle cells
..................................................................................................TACTC--------------------TACGAGTAACGGGTATAATAACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.20402200000000
..............................................................................................TTT-TACTC--------------------TACGAGTAACGGGTAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.10200200000000
..................................................................................................TACTC--------------------TACGAGTAACGGGTATAATAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.10202000000000
........................................................................................................................................................................................................................................................................................AAATTTATTAAACCAA----A------AAAAT----------------AG--------G-----.......................................................................................................................................................................................................................................................................................................................................................................................25200.05101000000000
...............................................................................................................................................ACCTT---CGA---------ATC----------------------------------------------------------------A------------------------------------AT-----AATTAGAAATTTAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05100100000000
..................................................................................................................................................TT---CGA---------ATC----------------------------------------------------------------A------------------------------------AT-----AATTAGAAATTTAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTAA-----T--------TTATTGTTCGAAATGTA................................................................................................................24200.05100100000000
.......................TTTATATGATCGGAAACGCTT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05110000000000
droEre2
TGATATATCAAGAATATATATACTTTATATGGTCGGAAATGTTTTCTTCTTCCTGTTACATACTT-------TTCAAC-GAATCTTTTTCAACCTTT-TACTC--------------------TATGAGTAACGGGTATAATTATGAT---------------GAA--------------------------------------ATCATC-AAAA----ACA-AA--------TCTA----CGCAAATTT--------------------------------------------------------------------------------------AA-------G------TTAAATTACA-------TATGT----------------------------------------------------------------------------------------------------------------------GATT---------------TATG-T---------------------------------------------TTACAGA-----G-TAA-------------TTTA-----------------------------------------CAAGAA------------------------------GAAA-------------------ATGATTCAATTTTTATGAATCAASizeHit CountTotal NormTotalM055
Female-body
M057
Embryo
V060
Head
V040
Embryo
V107
Male-body
V108
Head
GSM1528801
follicle cells
No Reads

Generated: 05/18/2015 at 02:55 AM