ID:

dmo_2594

 Coordinate:

scaffold_6680:23880096-23880246 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-20.3 -19.9 -19.9

Flybase annnotation

exon [dmoj_GLEANR_11398:2]; CDS [Dmoj\GI11306-cds]; intron [Dmoj\GI11306-in]

Repeatable elements

NameClassFamilyStrand
Helitron1_DmojRCHelitron+

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GCTTCAATAGCGCCGAAATAAACTGCATTCATACGTACGGACGGACAGCAAGACGGACATTGCACAAAACCAATAAACTCATTTCACTTTCGTTAATGAGTATAAAAAGCAAGGAGTTCGCTCACTACAAAAAGTAAACTTTTGGAAAATGCTCATATATTCTGTCTAGTGTGTACCCCAATAATCATATGAACCATTTAGAGTGGGAAAATTGCACAAGAGCTTGATTATGTAAATCATCATGTGCGAAC
**************************************************(((((((.((((........))))..(((((((..((....)).)))))))......(((((((((((.(((..........))).)))))))......)))).......))))))).(((((............)))))...........************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body		 V041
embryo
 V049
head
................................................................................................................................................................................................................................TGATTATGTAAATCATCATGTGC.... 23 0 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................................TCATATGAACCATTTAGAGTG.............................................. 21 0 1 1.00 1 1 0 0 0 0
........................................................................ATAAACTCATTTCACTTTCGTTAATGA........................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0
....................................................................................................................................................................................................TTTAGAGTGGGAAAATTGCACAAGAGC............................ 27 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................................................................GATTATGTAAATCATCATGTGC.... 22 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................................................................ATGTAAATCATCATGTGC.... 18 0 1 1.00 1 1 0 0 0 0
....CAATAGCGCCGAAATAAACTGCATTCA............................................................................................................................................................................................................................ 27 0 2 1.00 2 1 1 0 0 0
.......................................................................................................................................................................................................................ACAAGAGCTTGATTATGTAAATCAT........... 25 0 1 1.00 1 0 0 1 0 0
.........................................................................TAAACTCATTTCACTTTCGTTAATGA........................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................................................AATTGCACAAGAGCTTGATTATGT.................. 24 0 2 0.50 1 0 0 1 0 0
....CAATAGCGCCGAAATAAACTGCATTC............................................................................................................................................................................................................................. 26 0 2 0.50 1 1 0 0 0 0
...TCAATAGCGCCGAAATAAACTGCATT.............................................................................................................................................................................................................................. 26 0 2 0.50 1 0 1 0 0 0
..TTCAATAGCGCCGAAATAAACTGCAT............................................................................................................................................................................................................................... 26 0 2 0.50 1 0 1 0 0 0
.CTTCAATAGCGCCGAAATAAACTGCAT............................................................................................................................................................................................................................... 27 0 2 0.50 1 0 1 0 0 0
..TTCAATAGCGCCGAAATAAACTGCA................................................................................................................................................................................................................................ 25 0 3 0.33 1 1 0 0 0 0
.CTTCAATAGCGCCGAAATAAACTGCA................................................................................................................................................................................................................................ 26 0 3 0.33 1 0 1 0 0 0
...................................................................................TCACTTTCGTTAATGAGTATAAAA................................................................................................................................................ 24 0 4 0.25 1 0 1 0 0 0
....................................................................................................................................................................................................................................TATGTAATTCATCATGTGCTC.. 21 3 6 0.17 1 0 0 0 1 0
..TTCAATAGCGCCGAAATAAACTGC................................................................................................................................................................................................................................. 24 0 20 0.15 3 1 2 0 0 0
...................................................................................................................GTTCGCTCACAACGAGAAGT.................................................................................................................... 20 3 12 0.08 1 0 0 0 0 1
.....AATAGCGCCGAAATAAACTGC................................................................................................................................................................................................................................. 21 0 20 0.05 1 0 1 0 0 0
..TTCAATAGCGCCGAAATAAACTG.................................................................................................................................................................................................................................. 23 0 20 0.05 1 1 0 0 0 0
....CAATAGCGCCGAAATAAACTGC................................................................................................................................................................................................................................. 22 0 20 0.05 1 0 1 0 0 0
....CAATAGCGCCGAAATAAACTG.................................................................................................................................................................................................................................. 21 0 20 0.05 1 1 0 0 0 0

Anti-sense strand reads

CGAAGTTATCGCGGCTTTATTTGACGTAAGTATGCATGCCTGCCTGTCGTTCTGCCTGTAACGTGTTTTGGTTATTTGAGTAAAGTGAAAGCAATTACTCATATTTTTCGTTCCTCAAGCGAGTGATGTTTTTCATTTGAAAACCTTTTACGAGTATATAAGACAGATCACACATGGGGTTATTAGTATACTTGGTAAATCTCACCCTTTTAACGTGTTCTCGAACTAATACATTTAGTAGTACACGCTTG
**************************************************(((((((.((((........))))..(((((((..((....)).)))))))......(((((((((((.(((..........))).)))))))......)))).......))))))).(((((............)))))...........************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V041
embryo
 V110
male body
..........GCGGCTTTATTTGACGTAAGTAT.......................................................................................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0
..............................................................................................................................................ACCTTTTACGAGCATATTAGACT...................................................................................... 23 3 3 0.33 1 0 0 1 0
..................................................TCTGCCTGTAACGTGTTTTGGTTATTT.............................................................................................................................................................................. 27 0 3 0.33 1 0 1 0 0
...................................................CTGCCTGTAACGTGTTTTGGTTATTT.............................................................................................................................................................................. 26 0 4 0.25 1 0 1 0 0
...................................................................................................................................TTCATTTGAAGGCCTTTT...................................................................................................... 18 2 11 0.18 2 1 0 0 1
...............................................................................................................................................................................GGGGTAACAAGTATACTTG......................................................... 19 3 20 0.10 2 2 0 0 0
.............................................................CGTGTTTAGGTTATTTGAGTA......................................................................................................................................................................... 21 1 12 0.08 1 0 1 0 0
........................................TGCCTGTCGTTCTGCCTGTAA.............................................................................................................................................................................................. 21 0 20 0.05 1 1 0 0 0
....GTTATCGCGGCTTTATTTGACG................................................................................................................................................................................................................................. 22 0 20 0.05 1 1 0 0 0
..............................................TCGTTCTGCCTGTAACGTGTTTTGGTT.................................................................................................................................................................................. 27 0 20 0.05 1 0 0 0 1
...................................................CTGCCTGTACCGTGTTTTGGTT.................................................................................................................................................................................. 22 1 20 0.05 1 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6680:23880046-23880296 - dmo_2594 GCT-----------TCAATAGCGCCGA-AATAAACTGCATTCATACGTACGGACG--------------------GAC--------------------AGCAAGACGG--------ACATTGCACAAAACCAATA--------------------------AACTCAT--------------------------------------------------------------------------------TTCACTTTC-GTTAA-----------------TGAGTATAAAAAGCAAGGA-GTTCGC---------------TCAC-TACAAAAAGTAAACTTTTGGAAAATGCTCATATATTCTGTCTAGTGTGTACCCCAATAATCATATGAACCATTTAGAGTGGGAAAATTGCACAAGAGCTTGATTATGTAAATCATCATGTGC-------------------GAAC-
droVir3 scaffold_12970:5950712-5950832 + GCT-----------TCAATAGAAGCGAAAAAAAATCGCATTCATGCGGAGAGACA----------------AACGGAC--------------------AGCAAGACGA--------ACATGGCACAAAACCAATA--------------------------GCCTC-------------------------------------------------------------------------------TTATTTACTTTG-TGAAC-----------------CAAGTATTAAAAAGAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-
droGri2 scaffold_15110:24037377-24037605 + TCT-----------CTAAGGGTGTCGA-AAAAAGTGGCATTCATACAGACGGACA--------------------GAT--------------------GGACAGACAGCATGGCGGACATTGCACAAAATCAATA--------------------------TACTA-------------------------------------------------------------------------------TAATA--CCCTCTTTTTC-----------------AAAGTATTAAAATGTAGTGAATGCGACAATATTGCAAATAATCATTTTCAAAGAGTAATA-TTATAAACATACTCATTTA-----------------------A-------------------------------------------ATCACATAAAATAATTAGTACATTACATATTAATTTGATTATACA
droWil2 scf2_1100000003236:765-971 + GCT-----------CTTAAGACGGCTG-AGTAAAACGCATACGCACAGACGGACG----------------GACGGAC--------------------GGACAGACGG--------A--------------------CATGGCTATACCTACTCAG-------CTTCTCATGCTGATCAAGAATATATACTTTATGGGGTCGGAAACGTCTCCTTCTGTGCGTTACAAACATCTGACCAATTTTATAATA--CCCTCT---GC----------------AAGGGTATAAAAA---------------------------------------------------------------------------------------------------------------------------------------ATCACATGAACCATTAAGA--------------------------
dp5 XR_group6:10667655-10667707 - TA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGTGGCAAAATAGCTCAAGAGCTGGACTATGTGAATCATCATGTAA-------------------GAAC-
droPer2 scaffold_6596:209-336 + GCT-----------CTTATAGTCTTTG-AGCATTAGGCGCTGAAGGGGACGGACAGACGGACAGACGGACAGACGGACGGACAGACGGACGGACAGACGGACAGACAG--------A--------------------CATGGC----------------------------------------------------------------------------------------------------------TCATTTTG-AGTAT-----------------CGGGTATAAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3 scaffold_13417:3390739-3390819 - GCT-----------CCAAAACTGAGAG-ACTAGTTTGCGTAGAAACCGACAGACA--------------------GAC--------------------GGCCAGACGGACAGACGAA--------------------CATGCTTATATCGCCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396371:704873-704945 + TATCTCAATTTTCCTATTTACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGCGGAAAGATTGCCCAGGAGCTGGACTACGTGAACCATCACGTAC-------------------GTAC-
droKik1 scf7180000302626:218239-218300 + TGA-----------TTCGCACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGTGGAAAGATCGCCCAGGAGCTGGACTACGTGAATCACAACGTTC-------------------GCAC-
droFic1 scf7180000454107:1387835-1387886 - AGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGGCAAGATCGCACAAGAGCTGGACTACGTAAACCACCATGTGC-------------------GCAC-
droEle1 scf7180000489264:1030-1092 - GCT-----------TTAAAACTGAGAG-ACTAGTTTGCATATAAACGGACGGACA--------------------GAC--------------------GGACAGACGG--------A--------------------CATGGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000775203:1321-1398 + GCG------------------------------------TTCATACGGACAGACA--------------------GAC--------------------AGACAGACGG--------A--------------------CAGACGGA-----------CAGTGGACTA---------------------------------------------------------------------------------TTACTCTACG-AGTAA-----------------CGGGTATAAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000300013:36038-36154 + ACA----------------------------------------TACAGACG------------------------GAC--------------------GGACAGACGG--------ACGTTTCACTTAAGTGTAGGACTTACTCG---------------------------------------------------------------------------------------------------------TACCTTC-GTTATAAGACA-AACAATACCGCGAATTTAAAAA--------ATGCTG---------------T--------------------------------AATATATTTTTTTTA----------------------------------------------------------------------------------------------------AT-
droTak1 scf7180000415819:3708-3797 + GCT-----------TTTATAGTTTCCG-AAATCTCAGCGTTTATACAGACGGACA--------------------GAC--------------------AGACAGACGG--------A--------------------CATGGCAATATCGACTCGG-------CTAGT--------------------------------------------------------------------------------TTCAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTC-
droEug1 scf7180000408806:24377-24468 + TCT-----------CGTATAGTTCTTG-AGACCTCTGCGTTCATATGGACAAACG--------------------TAC--------------------GGGCAGACGG--------A--------------------CTTAGCTAAATCGACTTCG-------CTATT------------------------------------------------------------------------------------------GATAC-----------------TGAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA-
dm3 chr3L:17792603-17792656 - TCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGTGGCAAGATCGCACAGGAGCTGGACTACGTGAACCACCATGTGC-------------------GGAC-
droSim2 3l:17374420-17374473 - TCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGTGGCAAGATCGCACAGGAGCTGGACTACGTGAACCACCATGTAC-------------------GGAC-
droSec2 scaffold_1:1523981-1524038 - GCT-----------TTTATAGTTCCCG-AGACCTCTGCGTTCATATGGACGGACA--------------------GAC--------------------AGACGGACGG--------A--------------------C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 v2_chrUn_5251:493-605 + GCT-----------TTTGTAGTTCCTG-AGATCACAGCGTTCATACGGACGGACA--------------------GA----------GAC--------GGACAGACGGACAGACGGA--------------------CATGGTCA----------------------T--------------------------------------------------------------------------------TATACATTC-ATTTAAAATCATTACAA---------------AGTCAGGGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-
droEre2 scaffold_4845:2581749-2581839 + CG-------------------------------------TCCATACGGACGGACA--------------------GAC--------------------AGACAGACGG--------A--------------------CAAATCTA-----------GTA--TACCC-------------------------------------------------------------------------------TTTTACACTTCG-AGTAA-----------------TGGGTATAAAAATTAAAGA-ACGCTC---------------T------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
GCT-----------TCAATAGCGCCGA-AATAAACTGCATTCATACGTACGGACG--------------------GAC--------------------AGCAAGACGG--------ACATTGCACAAAACCAATA--------------------------AACTCAT--------------------------------------------------------------------------------TTCACTTTC-GTTAA-----------------TGAGTATAAAAAGCAAGGA-GTTCGC---------------TCAC-TACAAAAAGTAAACTTTTGGAAAATGCTCATATATTCTGTCTAGTGTGTACCCCAATAATCATATGAACCATTTAGAGTGGGAAAATTGCACAAGAGCTTGATTATGTAAATCATCATGTGC-------------------GAAC-SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TGATTATGTAAATCATCATGTGC-------------------.....2311.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................TCATATGAACCATTTAGAGTG..................................................................2111.001100000
....................................................................................................................................ATA--------------------------AACTCAT--------------------------------------------------------------------------------TTCACTTTC-GTTAA-----------------TGA.............................................................................................................................................................................................2711.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................TTTAGAGTGGGAAAATTGCACAAGAGC................................................2711.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................GATTATGTAAATCATCATGTGC-------------------.....2211.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTAAATCATCATGTGC-------------------.....1811.001100000
...............CAATAGCGCCGA-AATAAACTGCATTCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................2721.002100010
................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAGAGCTTGATTATGTAAATCAT...............................2511.001000001
.....................................................................................................................................TA--------------------------AACTCAT--------------------------------------------------------------------------------TTCACTTTC-GTTAA-----------------TGA.............................................................................................................................................................................................2611.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................AATTGCACAAGAGCTTGATTATGT......................................2420.501000001
...............CAATAGCGCCGA-AATAAACTGCATTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................2620.501100000
..............TCAATAGCGCCGA-AATAAACTGCATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................2620.501000010
..T-----------TCAATAGCGCCGA-AATAAACTGCAT................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.501000010
.CT-----------TCAATAGCGCCGA-AATAAACTGCAT................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.501000010
..T-----------TCAATAGCGCCGA-AATAAACTGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2530.331100000
.CT-----------TCAATAGCGCCGA-AATAAACTGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2630.331000010
.........................................................................................................................................................................................................................................................TCACTTTC-GTTAA-----------------TGAGTATAAAA.....................................................................................................................................................................................2440.251000010
..T-----------TCAATAGCGCCGA-AATAAACTGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.153100020
................AATAGCGCCGA-AATAAACTGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000010
..T-----------TCAATAGCGCCGA-AATAAACTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051100000
...............CAATAGCGCCGA-AATAAACTGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000010
...............CAATAGCGCCGA-AATAAACTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
droVir3
GCT-----------TCAATAGAAGCGAAAAAAAATCGCATTCATGCGGAGAGACA----------------AACGGAC--------------------AGCAAGACGA--------ACATGGCACAAAACCAATA--------------------------GCCTC-------------------------------------------------------------------------------TTATTTACTTTG-TGAAC-----------------CAAGTATTAAAAAGAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droGri2
TCT-----------CTAAGGGTGTCGA-AAAAAGTGGCATTCATACAGACGGACA--------------------GAT--------------------GGACAGACAGCATGGCGGACATTGCACAAAATCAATA--------------------------TACTA-------------------------------------------------------------------------------TAATA--CCCTCTTTTTC-----------------AAAGTATTAAAATGTAGTGAATGCGACAATATTGCAAATAATCATTTTCAAAGAGTAATA-TTATAAACATACTCATTTA-----------------------A-------------------------------------------ATCACATAAAATAATTAGTACATTACATATTAATTTGATTATACASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
GCT-----------CTTAAGACGGCTG-AGTAAAACGCATACGCACAGACGGACG----------------GACGGAC--------------------GGACAGACGG--------A--------------------CATGGCTATACCTACTCAG-------CTTCTCATGCTGATCAAGAATATATACTTTATGGGGTCGGAAACGTCTCCTTCTGTGCGTTACAAACATCTGACCAATTTTATAATA--CCCTCT---GC----------------AAGGGTATAAAAA---------------------------------------------------------------------------------------------------------------------------------------ATCACATGAACCATTAAGA--------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................................TACGCACAGACGGACG----------------GACGGAC--------------------GG....................................................................................................................................................................................................................................................................................................................................................................................25200.8517000170
.............................................................................................................................................................................................................ACGTCTCCTTCTGTGCGTTACAAACATC...............................................................................................................................................................................................................................................28200.40808000
..T-----------CTTAAGACGGCTG-AGTAAAACGCATA...............................................................................................................................................................................................................................................................................................................................................................................................................................................27200.40800080
.......................................TACGCACAGACGGACG----------------GACGGAC--------------------GGA...................................................................................................................................................................................................................................................................................................................................................................................26200.35701060
.......................................TACGCACAGACGGACG----------------GACGG............................................................................................................................................................................................................................................................................................................................................................................................................21200.30602040
.......................................TACGCACAGACGGACG----------------GACGGAC--------------------GGAC..................................................................................................................................................................................................................................................................................................................................................................................27200.15300030
..................................ACGCATACGCACAGACGGACG----------------.................................................................................................................................................................................................................................................................................................................................................................................................................21200.15310002
......................................ATACGCACAGACGGACG----------------GAC..............................................................................................................................................................................................................................................................................................................................................................................................................20200.10200020
...............................AAAACGCATACGCACAGACGGACG----------------GAC..............................................................................................................................................................................................................................................................................................................................................................................................................27200.10202000
....................................................................................................................................................................TTCTCATGCTGATCAAGAATAT..............................................................................................................................................................................................................................................................................................22200.10200020
...............................AAAACGCATACGCACAGACGGACG----------------G................................................................................................................................................................................................................................................................................................................................................................................................................25200.10200020
...................................................................................................................................................................................AGAATATATACTTTATGGGGTCGGAA...........................................................................................................................................................................................................................................................................26150.07101000
.............................................................................................................................................................................TGATCAAGAATATATACTTTATGGGT.................................................................................................................................................................................................................................................................................26160.06101000
..................................................................................................................................................................................AAGAATATATACTTTATGGGGTCG..............................................................................................................................................................................................................................................................................24170.06100010
...............................................................................................................................................................................................................GTCTCCTTCTGTGCGTTACAAACATCTGA............................................................................................................................................................................................................................................29200.05101000
...........................................CACAGACGGACG----------------GACGGAC--------------------GGACA.................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
.....................................................................................................................................................................................AATATATACTTTATGGGGTCG..............................................................................................................................................................................................................................................................................21200.05100010
...................................................GACG----------------GACGGAC--------------------GGACAGACGG--------A--------------------CATG...........................................................................................................................................................................................................................................................................................................................................26200.05101000
.......................................................................................................................................................CTCAG-------CTTCTCATGCTGATCAAG...................................................................................................................................................................................................................................................................................................23200.05101000
.....................................................................................................................................................................................................................TTCTGTGCGTTACAAACATCTGACC..........................................................................................................................................................................................................................................25200.05110000
..........................................................................................................................................................................TGCTGATCAAGAATATATACTTTAT.....................................................................................................................................................................................................................................................................................25200.05100010
.......................................TACGCACAGACGGACG----------------GACG.............................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
.......................................................................................................................................................................................TATATACTTTATGGGGTCGG.............................................................................................................................................................................................................................................................................20200.05101000
.............................................................................................................................................................................................................ACGTCTCCTTCTGTGCGTTAC......................................................................................................................................................................................................................................................21200.05101000
.......................................TACGCACAGACGGACG----------------GACGGAC--------------------......................................................................................................................................................................................................................................................................................................................................................................................23200.05100010
.........................................CGCACAGACGGACG----------------GACGGAC--------------------GGA...................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
.....................CGGCTG-AGTAAAACGCATAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101000
.......................................TACGCACAGACGGACG----------------GACGGAC--------------------G.....................................................................................................................................................................................................................................................................................................................................................................................24200.05100001
..................................................GGACG----------------GACGGAC--------------------GGACAGA...............................................................................................................................................................................................................................................................................................................................................................................19200.05100100
...................................CGCATACGCACAGACGGACG----------------GACGG............................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
................................................ACGGACG----------------GACGGAC--------------------GGACAG................................................................................................................................................................................................................................................................................................................................................................................20200.05101000
............................................................................................................................................................................................ACTTTATGGGGTCGGAAACGTCTCCT..................................................................................................................................................................................................................................................................26200.05101000
............................AGTAAAACGCATACGCACAGACGG....................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
................TAAGACGGCTG-AGTAAAACGCATACGC............................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
........................................................................................................................................................TCAG-------CTTCTCATGCTGATCAAGA..................................................................................................................................................................................................................................................................................................23200.05101000
..........................................................................GGAC--------------------GGACAGACGG--------A--------------------CATGGCTAT......................................................................................................................................................................................................................................................................................................................................24200.05100010
dp5
TA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGTGGCAAAATAGCTCAAGAGCTGGACTATGTGAATCATCATGTAA-------------------GAAC-SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGAATCATCATGTAA-------------------G....1812.0020200000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................ATAGCTCAAGAGCTGGACTATGTG.....................................2411.0010000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGGACTATGTGAATCATCATGTA.........................2611.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GCAAAATAGCTCAAGAGCTGGACT..........................................2411.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................AAATAGCTCAAGAGCTGGACT..........................................2111.0011000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................GGCAAAATAGCTCAAGAGCTGGACT..........................................2511.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTGAATCATCATGTAA-------------------GAAC-2311.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................AGCTCAAGAGCTGGACTATGTG.....................................2211.0010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................AAAATAGCTCAAGAGCTGGACTATGTG.....................................2711.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GCAAAATAGCTCAAGAGCTGGAC...........................................2311.0010100000000
droPer2
GCT-----------CTTATAGTCTTTG-AGCATTAGGCGCTGAAGGGGACGGACAGACGGACAGACGGACAGACGGACGGACAGACGGACGGACAGACGGACAGACAG--------A--------------------CATGGC----------------------------------------------------------------------------------------------------------TCATTTTG-AGTAT-----------------CGGGTATAAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................TATAGTCTTTG-AGCATTAGGCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................22203.40680680000
................TATAGTCTTTG-AGCATTAGGCGCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................25201.25250000025
..................................AGGCGCTGAAGGGGACGGACA.................................................................................................................................................................................................................................................................................................................................................................................................................................21200.306000006
.............................................................................................................................................GC----------------------------------------------------------------------------------------------------------TCATTTTG-AGTAT-----------------CGGGTA..........................................................................................................................................................................................21200.204030001
..........................................AAGGGGACGGACAGACGGACAG........................................................................................................................................................................................................................................................................................................................................................................................................................22200.153030000
...........................................................................................GACAGACGGACAGACAG--------A--------------------CA.............................................................................................................................................................................................................................................................................................................................................20200.153000003
.......................................................................................GACGGACAGACGGACAGA...............................................................................................................................................................................................................................................................................................................................................................................18200.051010000
..................................................................GGACAGACGGACGGACAGAC..................................................................................................................................................................................................................................................................................................................................................................................................20200.051000001
..............................................................................GGACAGACGGACGGACAGA.......................................................................................................................................................................................................................................................................................................................................................................................19200.051000001
.........................................................................CGGACGGACAGACGGACGG............................................................................................................................................................................................................................................................................................................................................................................................19200.051010000
droAna3
GCT-----------CCAAAACTGAGAG-ACTAGTTTGCGTAGAAACCGACAGACA--------------------GAC--------------------GGCCAGACGGACAGACGAA--------------------CATGCTTATATCGCCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................AGAG-ACTAGTTTGCGTAGAAACCGAC......................................................................................................................................................................................................................................................................................................................................................................................................................................26200.408080000
.....................................................CA--------------------GAC--------------------GGCCAGACGGACAGACG.....................................................................................................................................................................................................................................................................................................................................................................2250.201100000
............................ACTAGTTTGCGTAGAAACCGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................21200.153000003
droBip1
TATCTCAATTTTCCTATTTACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGCGGAAAGATTGCCCAGGAGCTGGACTACGTGAACCATCACGTAC-------------------GTAC-SizeHit CountTotal NormTotal
No Reads
droKik1
TGA-----------TTCGCACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGTGGAAAGATCGCCCAGGAGCTGGACTACGTGAATCACAACGTTC-------------------GCAC-SizeHit CountTotal NormTotal
No Reads
droFic1
AGA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGGCAAGATCGCACAAGAGCTGGACTACGTAAACCACCATGTGC-------------------GCAC-SizeHit CountTotal NormTotal
No Reads
droEle1
GCT-----------TTAAAACTGAGAG-ACTAGTTTGCATATAAACGGACGGACA--------------------GAC--------------------GGACAGACGG--------A--------------------CATGGC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
GCG------------------------------------TTCATACGGACAGACA--------------------GAC--------------------AGACAGACGG--------A--------------------CAGACGGA-----------CAGTGGACTA---------------------------------------------------------------------------------TTACTCTACG-AGTAA-----------------CGGGTATAAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
ACA----------------------------------------TACAGACG------------------------GAC--------------------GGACAGACGG--------ACGTTTCACTTAAGTGTAGGACTTACTCG---------------------------------------------------------------------------------------------------------TACCTTC-GTTATAAGACA-AACAATACCGCGAATTTAAAAA--------ATGCTG---------------T--------------------------------AATATATTTTTTTTA----------------------------------------------------------------------------------------------------AT-SizeHit CountTotal NormTotal
No Reads
droTak1
GCT-----------TTTATAGTTTCCG-AAATCTCAGCGTTTATACAGACGGACA--------------------GAC--------------------AGACAGACGG--------A--------------------CATGGCAATATCGACTCGG-------CTAGT--------------------------------------------------------------------------------TTCAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTC-SizeHit CountTotal NormTotal
No Reads
droEug1
TCT-----------CGTATAGTTCTTG-AGACCTCTGCGTTCATATGGACAAACG--------------------TAC--------------------GGGCAGACGG--------A--------------------CTTAGCTAAATCGACTTCG-------CTATT------------------------------------------------------------------------------------------GATAC-----------------TGAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA-SizeHit CountTotal NormTotal
No Reads
dm3
TCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGTGGCAAGATCGCACAGGAGCTGGACTACGTGAACCACCATGTGC-------------------GGAC-SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGGAGCTGGACTACGTGAACCA................................2417.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................GGCAAGATCGCACAGGAGCT...............................................2015.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGCTGGACTACGTGAACC.................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGCTGGACTACGTGAACCACC..............................2414.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................CAAGATCGCACAGGAGCTGG.............................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACTACGTGAACCACCATGTGC-------------------G....2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................CAAGATCGCACAGGAGCTGGA............................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................CAAGATCGCACAGGAGCTGGACT..........................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................GGCAAGATCGCACAGGAGCTGGACTAC........................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTGAACCACCATGTGC-------------------GGAC-2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCAAGATCGCACAGGAGCTGGA............................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................CGCACAGGAGCTGGACTACGTGA....................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TCGCACAGGAGCTGGACTAC........................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................GGCAAGATCGCACAGGAGCTGG.............................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGCTGGACTACGTGAAC..................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCAAGATCGCACAGGAGCT...............................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCAAGATCGCACAGGAGCTG..............................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGTGAACCACCATGTGC-------------------G....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................AAGATCGCACAGGAGCTGGAC...........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGAGCTGGACTACGTGAA...................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGACTACGTGAACCACC..............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGCTGGACTACGTGA....................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGCTGGACTACGTGAACCAC...............................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................GGCAAGATCGCACAGGAGCTGGAC...........................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................AGTGGCAAGATCGCACAGGAGCT...............................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACTACGTGAACCACCAT............................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................GGCAAGATCGCACAGGAGC................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGCTGGACTACGTGAA...................................1911.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGAGCTGGACTACGTG.....................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCAAGATCGCACAGGAGC................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................GAGTGGCAAGATCGCACAGGAGCTGGA............................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................GCACAGGAGCTGGACTACGTGAAC..................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCTGGACTACGTGAACCACC..............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGGAGCTGGACTACGTGAACC.................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGGAGCTGGACTACGT......................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................GACTACGTGAACCACCATGTGC-------------------GGA..2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGACTACGTGAACCACCATG...........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................AAGATCGCACAGGAGCTG..............................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGATCGCACAGGAGCTG..............................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................CGCACAGGAGCTGGACTACG.......................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................GAGTGGCAAGATCGCACAGGAGCT...............................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
droSim2
TCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGTGGCAAGATCGCACAGGAGCTGGACTACGTGAACCACCATGTAC-------------------GGAC-SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................................................................................................................................................................................................................TGGACTACGTGAACCACCATGTAC-------------------GGAC-2811.00100000000100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................CGCACAGGAGCTGGACTACGT......................................2111.00101000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................ATCGCACAGGAGCTGGACTAC........................................2111.00100010000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGATCGCACAGGAGCC...............................................1911.00101000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................CGCACAGGAGCTGGACTACGTGAACC.................................2611.00101000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................CGCACAGGAGCTGGACTACGTGAA...................................2411.00100000000000001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................GCACAGGAGCTGGACTACGTGAACCACCATG...........................3111.00100000010000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................TGGCAAGATCGCACAGGAGCTGGAC...........................................2511.00100000000010000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................GCACAGGAGCTGGACTACGTGAACC.................................2511.00101000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................CACAGGAGCTGGACTACGTGAA...................................2211.00100000000000001000
droSec2
GCT-----------TTTATAGTTCCCG-AGACCTCTGCGTTCATATGGACGGACA--------------------GAC--------------------AGACGGACGG--------A--------------------C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
GCT-----------TTTGTAGTTCCTG-AGATCACAGCGTTCATACGGACGGACA--------------------GA----------GAC--------GGACAGACGGACAGACGGA--------------------CATGGTCA----------------------T--------------------------------------------------------------------------------TATACATTC-ATTTAAAATCATTACAA---------------AGTCAGGGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
GCT-----------TTTGTAGTTCCTG-AGATCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.30600000000006
...................................AGCGTTCATACGGACGGACA--------------------GA----------.................................................................................................................................................................................................................................................................................................................................................................................................22200.05100100000000
..T-----------TTTGTAGTTCCTG-AGATCACAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05110000000000
...............TTGTAGTTCCTG-AGATCACAGCGT................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100000010000
...............TTGTAGTTCCTG-AGATCACAGCGTTC..............................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100100000000
droEre2
CG-------------------------------------TCCATACGGACGGACA--------------------GAC--------------------AGACAGACGG--------A--------------------CAAATCTA-----------GTA--TACCC-------------------------------------------------------------------------------TTTTACACTTCG-AGTAA-----------------TGGGTATAAAAATTAAAGA-ACGCTC---------------T------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/18/2015 at 02:55 AM