ID:

dmo_2593

 Coordinate:

scaffold_6680:23879297-23879447 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-11.0 -10.8 -10.7

Flybase annnotation

CDS [Dmoj\GI11306-cds]; exon [dmoj_GLEANR_11398:2]; intron [Dmoj\GI11306-in]

Repeatable elements

NameClassFamilyStrand
(TG)nSimple_repeatSimple_repeat+
Homo6DNAhAT-Pegasus+
mature
  1. scaffold_6308:723200-723220 -
  2. dmo_2593  scaffold_6680:23879337-23879357 -
star
  1. scaffold_4108:1777-1802 -
  2. scaffold_4585:2905-2930 +
  3. scaffold_5828:178-203 -
  4. scaffold_6328:3315187-3315212 -
  5. scaffold_6345:35994-36019 -
  6. scaffold_6473:8006760-8006785 +
  7. scaffold_6490:3652-3677 -
  8. scaffold_6498:3300371-3300396 -
  9. scaffold_6500:13859500-13859525 +
  10. scaffold_6500:30017934-30017959 -
  11. scaffold_6540:327356-327381 +
  12. scaffold_6540:1071052-1071077 -
  13. scaffold_6540:6042992-6043017 +
  14. scaffold_6540:13792293-13792318 -
  15. scaffold_6540:21459571-21459596 -
  16. scaffold_6654:2187377-2187402 +
  17. scaffold_6680:23446996-23447021 +
  18. dmo_2593  scaffold_6680:23879376-23879401 -
  19. scaffold_6680:24324002-24324027 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
TGCGCGAGCGCGCTGAAGAAATGGAACGCATGCGAGAGCATTACTTTCAGGTATGTTTCTACATTCAGTTTTAAGCAAGTAAGAAAGCTCTAGTCGAGATTGCTCGACTACGAGATCCCCTGAACTTTTCGAGCAATAGGTATTTCAATCATATTTCGCGTTTTTCTGCTTAGACAAGAAACACGAACACACACACGCATACACACACACACACATACGCACACACAAGGAGCCACGCCTAAACACGTATG
************************************************************************************************..(((((((((....(((.((....)).))).)))))))))........................****************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 M060
embryo
 V056
head
 V041
embryo
............................................................................................................................................TATTTCAATCATATTTCGCGT.......................................................................................... 21 0 2 1.50 3 2 1 0 0 0
......................GGAACGCATGCGAGAGCATTAC............................................................................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0
....................................................................................................................................................................TCTGCTTAGACAAGAAACACGAACACAC........................................................... 28 0 1 1.00 1 1 0 0 0 0
.........................ACGCATGCGAGAGCATTACTTTCAGG........................................................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0
..................AAATGGAACGCATGCGAGAGCA................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0
...........GCTGATGAAATGGAAAGCAT............................................................................................................................................................................................................................ 20 2 2 1.00 2 0 2 0 0 0
...................AATGGAACGCATGCGAGAGCAT.................................................................................................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0
...................AATGGAACGCATGCGAGAGCATT................................................................................................................................................................................................................. 23 0 1 1.00 1 0 1 0 0 0
.............TGATGAAATGGAAAGCATG........................................................................................................................................................................................................................... 19 2 2 1.00 2 1 1 0 0 0
............CTGATGAAATGGAAAGCAT............................................................................................................................................................................................................................ 19 2 4 0.75 3 0 3 0 0 0
............................................................................................................................................TATTTCAATCATATTTCGCG........................................................................................... 20 0 2 0.50 1 1 0 0 0 0
......................................TATTACCTTCAGGGATGTTTCT............................................................................................................................................................................................... 22 3 2 0.50 1 0 0 0 1 0
....................................................ATGTTGCTACATACAGCTTTA.................................................................................................................................................................................. 21 3 6 0.17 1 1 0 0 0 0
......................................................................................................................................................................TGATTAGAAAAGAAACACGGAC............................................................... 22 3 7 0.14 1 0 0 0 0 1
..............GATGAAATGGAAAGCATG........................................................................................................................................................................................................................... 18 2 8 0.13 1 1 0 0 0 0
......................................CATCACTGTCAGGTATATTT................................................................................................................................................................................................. 20 3 9 0.11 1 0 0 0 1 0
...................................GAGAGTAACTTTCAGGTAT..................................................................................................................................................................................................... 19 3 20 0.10 2 0 2 0 0 0
................................................................................................AGATTGCTCGACTACGAGATCCCCTG................................................................................................................................. 26 0 19 0.05 1 0 0 1 0 0
......................................................................GTAAGCAAGTAAGAAAGC................................................................................................................................................................... 18 1 20 0.05 1 1 0 0 0 0
................................................................................................AGATTGCTCGACTACGGGATCCCCC.................................................................................................................................. 25 2 20 0.05 1 0 0 1 0 0
..............................................................................................CGAGATTGCTCGACTACGAGATCCC.................................................................................................................................... 25 0 20 0.05 1 0 0 1 0 0
...........GCTGATGAAATGGAAAGC.............................................................................................................................................................................................................................. 18 2 20 0.05 1 0 1 0 0 0
.............................................................................................TCGAGATTGCTCGACTACGAGATCC..................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0

Anti-sense strand reads

ACGCGCTCGCGCGACTTCTTTACCTTGCGTACGCTCTCGTAATGAAAGTCCATACAAAGATGTAAGTCAAAATTCGTTCATTCTTTCGAGATCAGCTCTAACGAGCTGATGCTCTAGGGGACTTGAAAAGCTCGTTATCCATAAAGTTAGTATAAAGCGCAAAAAGACGAATCTGTTCTTTGTGCTTGTGTGTGTGCGTATGTGTGTGTGTGTGTATGCGTGTGTGTTCCTCGGTGCGGATTTGTGCATAC
******************************************************************************************..(((((((((....(((.((....)).))).)))))))))........................************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body		 V056
head
 V041
embryo
....................................................TACAACGATGTATGTCGAAATT................................................................................................................................................................................. 22 3 3 2.33 7 5 0 2 0 0
..........................................................................CGTTCATTCTTTCGAGATCAGCTC......................................................................................................................................................... 24 0 20 1.40 28 7 20 0 0 1
...................................................ATACAACGATGTATGTCGAAATT................................................................................................................................................................................. 23 3 1 1.00 1 1 0 0 0 0
....................................................TACAACGATGTATGTCGAAAT.................................................................................................................................................................................. 21 3 6 0.83 5 4 0 1 0 0
.....................................................ACAACGATGTATGTCGAAATT................................................................................................................................................................................. 21 3 5 0.60 3 2 0 0 1 0
.................................................................................................................CTAGGGGACTTGAAAAGCTCGTT................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0
..............................................................................CATTCTTTCGAGATCAGCTC......................................................................................................................................................... 20 0 20 0.20 4 0 4 0 0 0
..........................................................................CGTTCATTCTTTCGAGATCAGCT.......................................................................................................................................................... 23 0 20 0.10 2 2 0 0 0 0
.....................................................ACAACGATGTATGTCGAAAT.................................................................................................................................................................................. 20 3 15 0.07 1 1 0 0 0 0
...................................................................................................AACGAGCTGATGCTCTAGGGGACTT............................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0
..........................................................................CGTTCATTCTTTGGAGATCAGCTC......................................................................................................................................................... 24 1 20 0.05 1 0 1 0 0 0
.........................................................................................................................................................................................................GTGTGTGTGTGTGTATGCGTG............................. 21 0 20 0.05 1 1 0 0 0 0
...................................................................................................AACGAGCTGACGCTCTAGGGGACTTG.............................................................................................................................. 26 1 20 0.05 1 1 0 0 0 0
.....................................................................................TCGAGATCAGCTCTAACGAGC................................................................................................................................................. 21 0 20 0.05 1 1 0 0 0 0
...................................................................................................AACGAGCTGATGCTCTAGGGGACTTG.............................................................................................................................. 26 0 20 0.05 1 1 0 0 0 0
..............................................................................................................................................................................................................TGTGTGTGTATGCGTGTGTGT........................ 21 0 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6680:23879247-23879497 - dmo_2593 TGCGCGAGCGCGCTGAAGAAATGGAACGCATGCGAGAGCATTACTTTCAGG-TATGTTTCTAC-----ATTCAG--TTT--------------------------------------TAAGCAAGTAAGAAAGCTCTAGTCGAGATTGCTCGACTACGAGATCCCCTGAACTTTTCGA----GCAATAGGTATT---------------------------------------------------------------------------------------------TCAA----TCATATTTCG-----------CGTTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTGCTTAGACA-----A-GA--A--AC--ACGAA------CAC--ACACAC----GC----------A--------TA------------CACACACACACACA--------TA-----CGCACACACAAGGAGCCACG--------------------CCTAAACACGTATG
droVir3 scaffold_12970:1110127-1110355 + GAAATGGGGG-GCCG--------------------AAAGGTTATTGTGGGT-GATGTTTC--GT----ATTAAA--TT---------------------------------------TTAACAAGTA-CGAGGTTCTAGTCGGGAGCTTCCGACTAGGGGATACCCTGAAC-CATCTTATTCCAAC-ATCAAACG-----------------------------------------------------------------------------------------------------------------------------------------------CATACATATATTCTATTTTAGAAGCT---------------------------------ATATGTCAAGTTTGGTGACTCTAGCTCTTATTATTTA--------------CCAAAA---------------------------------------------------------------------------T------------------------------------------TGCCC----------------------------------AAAAAACAGGAT---------A----TCGATA--------------------T--AGATTTTTATC
droGri2 scaffold_15081:822399-822595 + ATTAT---------------------------------------TTTTATG-TATATTTTTTC-----TTTTGC--TTTTGGTAAAAAGGCCAAAATAAAGGTGTTTTAATACCGTTA----------------------------------------------------------------ACAG-CAC--ACG------------------CCAAATTATTGTAATTACTGTTTTCCATTACTTGAGAGTTTGTTGGCCAAAGAACAGGAAACG------------CAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAA-AAGCAT---------------------------------TT-------AA--CACAC----------------------------------ACACACACACAC---------A----GCGAGA--------------------C--ACACTCAAACA
droWil2 scf2_1100000004510:15082-15252 - AAGCA------------------------------------------A----------------------------------------------------------------------------ATAAAAAAACATTTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAAAC------TTTACCGAGCATATACATGAATAATTAAAATTTAATTTGGGCAATATATATTACACATACTCACACAAAGAG---------------------------------------------------------------------------------------------------------------------------------A-----GACAC--ACACACACACA--C--ACACAC----ACACACACACA--CACAC----------------------------------ACACACACACAC---------A----CACACA--------------------C--ACACACACACA
dp5 XR_group6:7525006-7525110 + AATTA------------------------------------------AATT-GGTTGCG--TGTCAATATTTGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-G-----GACAC----ACA------CAC--ACACAC----ACA--------C----------A------------CACACACACACACA--------CA-----CACACACACACAGAGCAATG--------------------CTTGAATAAATAAA
droPer2 scaffold_21:432686-432841 + TTCTTC-------------------------------------------------------------------------------------------------------------------------------------------------GGCTTCGGAATCGCTT----TTTTCCA----CCAAAAGGTGTG------------------------------------------------------------------------------------CCAATT---TGGGGTTC---AGTTG-CACCTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------GGCTATATC---TTCATACAC---------------------------------G-----TACAC--ACACACACACA--C--ACACAC----ACACACACACA--CACAC----------------------------------ACACACACACAC---------A----CACACA--------------------C--ACAAACATATA
droAna3 scaffold_13340:13368623-13368702 + CCGCTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-A-----G--CCACACGCA------CAC--ACACAC----A----------CA--------CA------------CACACACCCGCACA--------GG-----AGCTCACCCACAGAGCCA-G--------------------CT--TAAATATGCA
droBip1 scf7180000396427:21553-21666 - AAGAACGAAC------------------------------------------GAACCG---------------------------------------------------------------------------ACAGTGCTCC--------GTCTC-GCTGCTTCCAGAACTC----------------------------------------------------------------------------------------------------------CAATAATTCC---------AGTTT------------------C-------------------------------CTCTT-CCAGTCTT---------------CAG----------------------------------------------------------------------------------------------------------------------------------CCAA-A-----G--ACAC--GCT------CAC--ACA--C-------------------------------------------------------------------------------------ACA--------------------C--ACACACACACA
droKik1 scf7180000302475:2818101-2818230 - CTTCT------------------------------------------AAAGCA-ATTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATAA--AA--TTTTAATCGC-ATGCGATTTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGACTAGGCGCCAA-A-----G--CCAC--ACA------CAC--ACA--CACACA----------CA--------CAT------CAACG--------CATTTTTGCACGCACAC-------------ATGAGCTGACG--------------------C--CAACGCACACA
droFic1 scf7180000454077:576262-576396 + TAAATGAGAA-------------------------AAAAACTAATCGAGTC-GATTTCT--CGC-----CCTGC--ACT-------------------------------------------------------------TGGCAATATTCATT-------------------------------------------------------------------------------------------------------------------------------------TGGGGGAC--AT--T------------------------------------------------------AT-TTAGCTCT---------------CAGGAAAAGGAACCCATATACAAAGCT-------------------------------------------------------------------------------------------------------------------------CAC--TCA------CTCACACA--C-------------------------------------------------------------------------------------ACA--------------------C--ACACACGCAC-
droEle1 scf7180000490168:57165-57399 + CAAAA-------------------------------------------------------------------------------------------------------------------------AATAACGCTATAGTCGAGTTCCCCCGACTATTAGATACCCGTTACTCAGTCA----ACA----------AACTTCCAACACTAGAAGCTAA-----------------------------GAGCGATTACCGGCAGAGCAGCGGCA-GAGCGGCGATA---CAGA-------------------------------------------------------------------------------------------------------------------ACTTAATTACCCTATAACTTCTAAAATAAGAGCTCGAATTCT------------------AAAATTATC---TATATACCGATTGAT------AGG-------------ACCA-A-----A--A------------------------------------------CACAC----------------------------------TCACGC---------------AGAGAATAACA--------------------CCAAAAGTCTTACA
droRho1 scf7180000767967:224495-224676 + TTTAA------------------------------------------T-----------------------------AC--------------------------------------AAAACAAGAGAGAACGCTATAGTCGAGTGC-CTCGACTATTAGATACCCGTTACTCAGCTA----AAC----------AACTT--AATATTATAATTG--------------------------------------------------------------------------CCGGGC---AATTG-CAACTGT-G--------TACAATGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-A-----T--ACATATGCT------TAC--ATACAT----A----------CA--------CA------------CATACGCCATTGTT--------TG-----AC---------------------------TCAGACCTCAGAC---ACAC-GGCG
droBia1 scf7180000302291:170019-170166 + ATATA------------------------------------------T----------------------------TTT--------------------------------------CAAACATGGAAGAAAGCTGTAGTCGAGGGC-CTCGACTATCAAATACCCGTTACTCAGCTT----GA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGAGCAAAATGAAA--A------------------------------------------TGGATATATATAGGCAGCAAAG--------------------------------------------GAATATTGTAAGGCGCCGCCTACCGGCTATTTCGGTATG
droTak1 scf7180000410443:6520-6747 + AGCAGTGCAA-G-----------------------------------CAGT-TGCGTTGCTGC-----ATGCATATCTT---------------------------------CATTAAAAACAAGAGAGAACGTTATAGTCGGGTGC-CCCGACTATCAGATACCCGTTACTCAGCTA----GCAG-TGCAATCA---------------------------------------------------------------------------------------------CAC--------------------------------------------------------------------------------------------------------------------------------ATAACTTTTAAACGAATGGTCCG-ATTTG------------------AAAAGTGTCTTCTACATTTCGATAGGTATAAATA--TA-------------CACAACCAAA--T------------------------------------------TGCATTTATACA-----------------------------------GGAC---------A--CA-TTTTA--------------------A--AATCGTTAGTG
droEug1 scf7180000409110:439758-439884 - GAGCA------------------------------------------AAAGTTATTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACAC--AT--TTTTAATTTT-TTGCTCCTTTGCAAGGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTA-------------CACAC--ACACCCAAA--CAC--ACACAC----ACAC------------------A------------CACACCCAAACACA--------CA-----CGCACACACACATAGCCAT--------------------------ACACACAC-
dm3 chrX:4593524-4593629 + TTTCA------------------------------------------ATCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTC-------GTTGGCGCTTAGCAGAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-----A-GA--A--CC--ACACACACACA--C--ACACAC----ACACACACACA--CACAC----------------------------------ACACACACACAC---------A----CAAACA--------------------C--ACACACACACG
droSim2 x:17355034-17355110 - GCTTA------------------------------------------G----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-----TAAAC--ACGCCCACCCA--C--CACCAC----ACGCCCGCCCA--CACAC----------------------------------ACGAACACACAA---------A----TACATG--------------------T--GAACACACGCG
droSec2 scaffold_10:1983018-1983137 + GGGCA------------------------------------------ACAATTATCTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCAA-CCATC-TTTTAGTTGGGTGGTTATTTTGCAAAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-----A-----T--ACTCACGCA------CTC--ACACAC----AC----------A--------CA------------CACACACACACACA--------CA-----CACACACACACAAACACACG--------------------C-----------CT
droYak3 3L:15387128-15387310 - dya_805 TATTCC-----------------------------------------CAGG-TAATTTGCAAC-----TTTCAGATTG-----------------------------CCATACATTTAAAACAAGAGAGAACGCTGTAGTCGAGTTT-CTCGACTATCTGATACCCGTTACTCAGCGG----GCT---GCTACCG---------------------------------------------------------------------------------------------CAC----CAAAATTTAG-----------AAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT--TAC-------AAGACCAATACAAAA--A------------------------------------------TGAAAAAATAC------CGAAA-----------------------------------------CA-TTTTT--------------------C--AAAAGTGTGGG
droEre2 scaffold_4784:21288898-21289061 - AAACA----------------------------------------------------------------------------------------------------------------------AGATAGAATGCTATAGTCGAGTTC-CGCGACTATCAGATACCCGTTACTCTTGTG----GAAG-TGCAAACG-----------------------------------------------------------------------------------------------------------------------------------------------AGAAATTTTAACATTTT---------------------------------------------------------------------------------------------CCGGAATGCCCGAAGAAA--------------------------------TTGGGAC-------AAAACTAATAAAATG--A------------------------------------------AAAAA-----------------------------------------------GAAAACATAAAAA-GTGTG--------------------T--TTAAATGTGTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
TGCGCGAGCGCGCTGAAGAAATGGAACGCATGCGAGAGCATTACTTTCAGG-TATGTTTCTAC-----ATTCAG--TTT--------------------------------------TAAGCAAGTAAGAAAGCTCTAGTCGAGATTGCTCGACTACGAGATCCCCTGAACTTTTCGA----GCAATAGGTATT---------------------------------------------------------------------------------------------TCAA----TCATATTTCG-----------CGTTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTGCTTAGACA-----A-GA--A--AC--ACGAA------CAC--ACACAC----GC----------A--------TA------------CACACACACACACA--------TA-----CGCACACACAAGGAGCCACG--------------------CCTAAACACGTATGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..............................................................................................................................................................................................TATT---------------------------------------------------------------------------------------------TCAA----TCATATTTCG-----------CGT......................................................................................................................................................................................................................................................................................................................................................................2121.503200001
......................GGAACGCATGCGAGAGCATTAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCTTAGACA-----A-GA--A--AC--ACGAA------CAC--AC..............................................................................................................................2811.001100000
.........................ACGCATGCGAGAGCATTACTTTCAGG-.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
..................AAATGGAACGCATGCGAGAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
...................AATGGAACGCATGCGAGAGCAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
...................AATGGAACGCATGCGAGAGCATT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
..............................................................................................................................................................................................TATT---------------------------------------------------------------------------------------------TCAA----TCATATTTCG-----------CG.......................................................................................................................................................................................................................................................................................................................................................................2020.501100000
..............................................................................................................................................AGATTGCTCGACTACGAGATCCCCTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26190.051000010
............................................................................................................................................CGAGATTGCTCGACTACGAGATCCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000010
...........................................................................................................................................TCGAGATTGCTCGACTACGAGATCC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051100000
droVir3
GAAATGGGGG-GCCG--------------------AAAGGTTATTGTGGGT-GATGTTTC--GT----ATTAAA--TT---------------------------------------TTAACAAGTA-CGAGGTTCTAGTCGGGAGCTTCCGACTAGGGGATACCCTGAAC-CATCTTATTCCAAC-ATCAAACG-----------------------------------------------------------------------------------------------------------------------------------------------CATACATATATTCTATTTTAGAAGCT---------------------------------ATATGTCAAGTTTGGTGACTCTAGCTCTTATTATTTA--------------CCAAAA---------------------------------------------------------------------------T------------------------------------------TGCCC----------------------------------AAAAAACAGGAT---------A----TCGATA--------------------T--AGATTTTTATCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................T---------------------------------ATATGTCAAGTTTGGTGACTCT..................................................................................................................................................................................................................................................................23201.05210000000000000000000000002100000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TTTA--------------CCAAAA---------------------------------------------------------------------------T------------------------------------------TGCCC----------------------------------AAAAAACAGGA.......................................................27200.459000000000000000000000000300030000000300000000000000000000000000
..........................................................................................................................AAGTA-CGAGGTTCTAGTCGGGAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24120.334001000000000000000000000000010010001000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................T---------------------------------ATATGTCAAGTTTGGTGACTCTAGCT..............................................................................................................................................................................................................................................................27200.306000000000000000000000000600000000000000000000000000000000000000
.............................................................................................................................TA-CGAGGTTCTAGTCGGGAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21140.213001000000000000000000001000000000100000000000000000000000000000
.............................................................................................................................TA-CGAGGTTCTAGTCGGGAGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22140.213000000000000000000000002000000001000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................T---------------------------------ATATGTCAAGTTTGGTGACTCTAGC...............................................................................................................................................................................................................................................................26200.204000000000000000000000000000000040000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TTTA--------------CCAAAA---------------------------------------------------------------------------T------------------------------------------TGCCC----------------------------------AAAAAACAGG........................................................26200.204000000000000000000000000030000000000100000000000000000000000000
...........................................................................................................................AGTA-CGAGGTTCTAGTCGGGAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23120.172000000000000000000000000000000001001000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TTTA--------------CCAAAA---------------------------------------------------------------------------T------------------------------------------TGCCC----------------------------------AAAAAACAGGAT---------.............................................28200.153000000000000000000000000000030000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................CAAGTTTGGTGACTCTAGCTC.............................................................................................................................................................................................................................................................21200.153000000000000000000000000000030000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................TTAGAAGCT---------------------------------ATATGTCAAGTTTGGTG.......................................................................................................................................................................................................................................................................26200.153000000000000000000000000001200000000000000000000000000000000000
.............................................................................................................................TA-CGAGGTTCTAGTCGGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19150.132000002000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................CATACATATATTCTATTTTAGAAGCT---------------------------------AT......................................................................................................................................................................................................................................................................................28100.101000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------------------------------------------------------------T------------------------------------------TGCCC----------------------------------AAAAAACAGGAT---------A----TCGATA--------------------T--...........27200.102000000000000000000000000000000010010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................ATATGTCAAGTTTGGTGACTCTAGC...............................................................................................................................................................................................................................................................25200.102000000000000000000000000002000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................T---------------------------------ATATGTCAAGTTTGGTGACT....................................................................................................................................................................................................................................................................21200.102000000000000000000000000000000200000000000000000000000000000000
..........................................................................................................................AAGTA-CGAGGTTCTAGTCGGGAGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25120.081000000000000000000001000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C----------------------------------AAAAAACAGGAT---------A----TCGATA--------------------T--AGAT.......25120.081000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................AGTA-CGAGGTTCTAGTCGGGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22130.081000000000000000000000000000010000000000000000000000000000000000
..............................................................................................................................A-CGAGGTTCTAGTCGGGAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20140.071000000000000000000001000000000000000000000000000000000000000000
...........................................................................................................................AGTA-CGAGGTTCTAGTCGGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20140.071000000000000000000000000000010000000000000000000000000000000000
...........................................................................................................................AGTA-CGAGGTTCTAGTCGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19150.071000000000000000000000000000100000000000000000000000000000000000
............................................................................................................................GTA-CGAGGTTCTAGTCGGGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21150.071000000000000000000000000000000010000000000000000000000000000000
................................................................................................................................CGAGGTTCTAGTCGGGAGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20170.061010000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................GCT---------------------------------ATATGTCAAGTTTGGTGACTCT..................................................................................................................................................................................................................................................................25200.051000000000000000000000000000000100000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................T---------------------------------ATATGTCAAGTTTGGTGACTCTAGCTC.............................................................................................................................................................................................................................................................28200.051000000000000000000000000000000100000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TTATTATTTA--------------CCAAAA---------------------------------------------------------------------------T------------------------------------------TGCCC----------------------------------AA................................................................24200.051000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------------------------------------------TGCCC----------------------------------AAAAAACAGGAT---------.............................................18200.051000000000000000000000000100000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................T---------------------------------ATATGTCAAGTTTGGTG.......................................................................................................................................................................................................................................................................18200.051000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................TAGAAGCT---------------------------------ATATGTCAAGTTTGGTGAC.....................................................................................................................................................................................................................................................................27200.051000000000000000000000000010000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATTTA--------------CCAAAA---------------------------------------------------------------------------T------------------------------------------TGCCC----------------------------------AAAAA.............................................................25200.051000000000000000000000000000100000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................TTCTATTTTAGAAGCT---------------------------------ATATGT..................................................................................................................................................................................................................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................TTTTAGAAGCT---------------------------------ATATGTCAAG..............................................................................................................................................................................................................................................................................21200.051000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................TATTTTAGAAGCT---------------------------------ATATGTCAAGT.............................................................................................................................................................................................................................................................................24200.051000000000000000000000000100000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------------------------------------------------------------T------------------------------------------TGCCC----------------------------------AAAAAACAGGAT---------A----TCG.....................................23200.051000000000000000000000000000000000100000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAA---------------------------------------------------------------------------T------------------------------------------TGCCC----------------------------------AAAAAACAGG........................................................20200.051000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................TATGTCAAGTTTGGTGACTCTAGCTCT............................................................................................................................................................................................................................................................27200.051001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................AGAAGCT---------------------------------ATATGTCAAGTTTGGTGACT....................................................................................................................................................................................................................................................................27200.051000010000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................TTTAGAAGCT---------------------------------ATATGTCAAGTTTGG.........................................................................................................................................................................................................................................................................25200.051001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TTATTATTTA--------------CCAAAA---------------------------------------------------------------------------T------------------------------------------TGCC.....................................................................................................21200.051000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................TCGGGAGCTTCCGACTAGGGGATACCC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000000010000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................AGAAGCT---------------------------------ATATGTCAAGTTTGGTGA......................................................................................................................................................................................................................................................................25200.051000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................TTCTAGTCGGGAGCTTCCGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000010000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C----------------------------------AAAAAACAGGAT---------A----TCGATA--------------------..............20200.051000000000000000000000000000010000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C----------------------------------AAAAAACAGGAT---------A----TCGAT...................................19200.051000000000000000000000010000000000000000000000000000000000000000
droGri2
ATTAT---------------------------------------TTTTATG-TATATTTTTTC-----TTTTGC--TTTTGGTAAAAAGGCCAAAATAAAGGTGTTTTAATACCGTTA----------------------------------------------------------------ACAG-CAC--ACG------------------CCAAATTATTGTAATTACTGTTTTCCATTACTTGAGAGTTTGTTGGCCAAAGAACAGGAAACG------------CAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAA-AAGCAT---------------------------------TT-------AA--CACAC----------------------------------ACACACACACAC---------A----GCGAGA--------------------C--ACACTCAAACASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
AAGCA------------------------------------------A----------------------------------------------------------------------------ATAAAAAAACATTTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAAAC------TTTACCGAGCATATACATGAATAATTAAAATTTAATTTGGGCAATATATATTACACATACTCACACAAAGAG---------------------------------------------------------------------------------------------------------------------------------A-----GACAC--ACACACACACA--C--ACACAC----ACACACACACA--CACAC----------------------------------ACACACACACAC---------A----CACACA--------------------C--ACACACACACASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
dp5
AATTA------------------------------------------AATT-GGTTGCG--TGTCAATATTTGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-G-----GACAC----ACA------CAC--ACACAC----ACA--------C----------A------------CACACACACACACA--------CA-----CACACACACACAGAGCAATG--------------------CTTGAATAAATAAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
TTCTTC-------------------------------------------------------------------------------------------------------------------------------------------------GGCTTCGGAATCGCTT----TTTTCCA----CCAAAAGGTGTG------------------------------------------------------------------------------------CCAATT---TGGGGTTC---AGTTG-CACCTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------GGCTATATC---TTCATACAC---------------------------------G-----TACAC--ACACACACACA--C--ACACAC----ACACACACACA--CACAC----------------------------------ACACACACACAC---------A----CACACA--------------------C--ACAAACATATASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
CCGCTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-A-----G--CCACACGCA------CAC--ACACAC----A----------CA--------CA------------CACACACCCGCACA--------GG-----AGCTCACCCACAGAGCCA-G--------------------CT--TAAATATGCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA--------CA------------CACACACCCGCACA--------GG-----AGCTC.................................................2511.001000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCACCCACAGAGCCA-G--------------------CT--TAAATATGCA2811.001000001
droBip1
AAGAACGAAC------------------------------------------GAACCG---------------------------------------------------------------------------ACAGTGCTCC--------GTCTC-GCTGCTTCCAGAACTC----------------------------------------------------------------------------------------------------------CAATAATTCC---------AGTTT------------------C-------------------------------CTCTT-CCAGTCTT---------------CAG----------------------------------------------------------------------------------------------------------------------------------CCAA-A-----G--ACAC--GCT------CAC--ACA--C-------------------------------------------------------------------------------------ACA--------------------C--ACACACACACASizeHit CountTotal NormTotal
No Reads
droKik1
CTTCT------------------------------------------AAAGCA-ATTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTATAA--AA--TTTTAATCGC-ATGCGATTTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTGACTAGGCGCCAA-A-----G--CCAC--ACA------CAC--ACA--CACACA----------CA--------CAT------CAACG--------CATTTTTGCACGCACAC-------------ATGAGCTGACG--------------------C--CAACGCACACASizeHit CountTotal NormTotal
No Reads
droFic1
TAAATGAGAA-------------------------AAAAACTAATCGAGTC-GATTTCT--CGC-----CCTGC--ACT-------------------------------------------------------------TGGCAATATTCATT-------------------------------------------------------------------------------------------------------------------------------------TGGGGGAC--AT--T------------------------------------------------------AT-TTAGCTCT---------------CAGGAAAAGGAACCCATATACAAAGCT-------------------------------------------------------------------------------------------------------------------------CAC--TCA------CTCACACA--C-------------------------------------------------------------------------------------ACA--------------------C--ACACACGCAC-SizeHit CountTotal NormTotal
No Reads
droEle1
CAAAA-------------------------------------------------------------------------------------------------------------------------AATAACGCTATAGTCGAGTTCCCCCGACTATTAGATACCCGTTACTCAGTCA----ACA----------AACTTCCAACACTAGAAGCTAA-----------------------------GAGCGATTACCGGCAGAGCAGCGGCA-GAGCGGCGATA---CAGA-------------------------------------------------------------------------------------------------------------------ACTTAATTACCCTATAACTTCTAAAATAAGAGCTCGAATTCT------------------AAAATTATC---TATATACCGATTGAT------AGG-------------ACCA-A-----A--A------------------------------------------CACAC----------------------------------TCACGC---------------AGAGAATAACA--------------------CCAAAAGTCTTACASizeHit CountTotal NormTotal
No Reads
droRho1
TTTAA------------------------------------------T-----------------------------AC--------------------------------------AAAACAAGAGAGAACGCTATAGTCGAGTGC-CTCGACTATTAGATACCCGTTACTCAGCTA----AAC----------AACTT--AATATTATAATTG--------------------------------------------------------------------------CCGGGC---AATTG-CAACTGT-G--------TACAATGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-A-----T--ACATATGCT------TAC--ATACAT----A----------CA--------CA------------CATACGCCATTGTT--------TG-----AC---------------------------TCAGACCTCAGAC---ACAC-GGCGSizeHit CountTotal NormTotal
No Reads
droBia1
ATATA------------------------------------------T----------------------------TTT--------------------------------------CAAACATGGAAGAAAGCTGTAGTCGAGGGC-CTCGACTATCAAATACCCGTTACTCAGCTT----GA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGAGCAAAATGAAA--A------------------------------------------TGGATATATATAGGCAGCAAAG--------------------------------------------GAATATTGTAAGGCGCCGCCTACCGGCTATTTCGGTATGSizeHit CountTotal NormTotal
No Reads
droTak1
AGCAGTGCAA-G-----------------------------------CAGT-TGCGTTGCTGC-----ATGCATATCTT---------------------------------CATTAAAAACAAGAGAGAACGTTATAGTCGGGTGC-CCCGACTATCAGATACCCGTTACTCAGCTA----GCAG-TGCAATCA---------------------------------------------------------------------------------------------CAC--------------------------------------------------------------------------------------------------------------------------------ATAACTTTTAAACGAATGGTCCG-ATTTG------------------AAAAGTGTCTTCTACATTTCGATAGGTATAAATA--TA-------------CACAACCAAA--T------------------------------------------TGCATTTATACA-----------------------------------GGAC---------A--CA-TTTTA--------------------A--AATCGTTAGTGSizeHit CountTotal NormTotal
No Reads
droEug1
GAGCA------------------------------------------AAAGTTATTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACAC--AT--TTTTAATTTT-TTGCTCCTTTGCAAGGA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCTA-------------CACAC--ACACCCAAA--CAC--ACACAC----ACAC------------------A------------CACACCCAAACACA--------CA-----CGCACACACACATAGCCAT--------------------------ACACACAC-SizeHit CountTotal NormTotal
No Reads
dm3
TTTCA------------------------------------------ATCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTC-------GTTGGCGCTTAGCAGAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-----A-GA--A--CC--ACACACACACA--C--ACACAC----ACACACACACA--CACAC----------------------------------ACACACACACAC---------A----CAAACA--------------------C--ACACACACACGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................................................................................................................................................................................................................................................................................................TTTC-------GTTGGCGCTTAGCAGAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-----A-GA--.......................................................................................................................................................27111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000010020000000000000000000000010300000
................................................TCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTC-------GTTGGCGCTTAGCAGA..............................................................................................................................................................................................................................................................................................................................................................2517.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000010002110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.............................................................................................................................................................................................................................................................................................................TTC-------GTTGGCGCTTAGCAGAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-----A-GA--A--C...................................................................................................................................................2817.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-----A-GA--A--CC--ACACACACACA--C--ACACAC----ACACACACA.............................................................................................................3514.0040000000000000000000000000000000000000000000000000000000003010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................TTAGCAGAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-----A-GA--A--CC--ACACACA.........................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000
..............................................................................................................................................................................................................................................................................................................TC-------GTTGGCGCTTAGCAGAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-----A-GA--.......................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000100000
.............................................................................................................................................................................................................................................................................................................TTC-------GTTGGCGCTTAGCAGAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-----A-GA--.......................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
.............................................................................................................................................................................................................................................................................................................TTC-------GTTGGCGCTTAGCAGAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-----A-GA--A--....................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................TAGCAGAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-----A-GA--A--CC--ACACACA.........................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
....A------------------------------------------ATCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTC-------GTTGGCGCTTAGCAGA..............................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................TTTC-------GTTGGCGCTTAGCAGAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-----A-...........................................................................................................................................................2512.0020000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
TTTCA------------------------------------------ATCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTC-------GTTGGCGCT.....................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................................................................................................................................................................................................................................................................................................TTC-------GTTGGCGCTTAGCAGAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-----A-G..........................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
........................................................................................................................................................................................................................................................................................................................................G----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-----A-GA--A--CC--ACACACACACA--C--ACACAC----ACACACAC..............................................................................................................3511.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................ATCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTC-------GTTGGCGCTTAGCA................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................TGGCGCTTAGCAGAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-----A-G..........................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................TC-------GTTGGCGCTTAGCAGAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-----A-G..........................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTC-------GTTGGCGCTTAGCAGAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-----A-G..........................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................TAGCAGAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-----A-GA--A--CC--A...............................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
..TCA------------------------------------------ATCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTC-------GTTGGCGCTTAGCAGA..............................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................TTGGCGCTTAGCAGAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-----A-GA--A--CC--................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
............................................................................................................................................................................................................................................................................................................TTTC-------GTTGGCGCTTAGCAGAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-----A-G..........................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...............................................ATCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTC-------GTTGGCGCTTAGCAGAG.............................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................TGGCGCTTAGCAGAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-----A-GA--A--CC--ACAC............................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................CTTAGCAGAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-----A-GA--A--CC--A...............................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................CGCTTAGCAGAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-----A-GA--A--CC--ACACACA.........................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................GCTTAGCAGAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-----A-GA--A--CC--ACA.............................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................CC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTC-------GTTGGCGCTTAGCAGAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------....................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................TCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTC-------GTTGGCGCTTAGCAGAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-----A-...........................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................TTGGCGCTTAGCAGAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-----A-GA--A--C...................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................TTC-------GTTGGCGCTTAGCAGAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C...................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................GCTTAGCAGAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-----A-GA--A--CC--ACACACA.........................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................TTGGCGCTTAGCAGAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-----A-GA--A--CC--ACA.............................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................................................................................TTTC-------GTTGGCGCTTAGCAGAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-----A-GA--A--C...................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................CTTAGCAGAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-----A-GA--A--CC--ACACACA.........................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................ATCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTC-------GTTGGCGCTTAGCAGA..............................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................TCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTC-------GTTGGCGCTTAGCAGAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------....................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.TTCA------------------------------------------ATCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTC-------GTTGGCGCTTA...................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................CC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTTC-------GTTGGCGCTTAGCAGA..............................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................AATTTC-------GTTGGCGCTTAGCAGAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C...................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................AGCAGAGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-----A-GA--A--CC--ACA.............................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACACA--CACAC----------------------------------ACACACACAC........................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACAC---------A----CAAACA--------------------C--ACACA......19200.0510000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC----ACACACACACA--CACAC----------------------------------ACACACA...........................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACA--C--ACACAC----ACACACACACA--CACAC----------------------------------..................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACACACA--CACAC----------------------------------ACACACAC..........................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--ACACACACACA--C--ACACAC----ACACACACACA--CACAC----------------------------------..................................................................35200.0510000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC---------A----CAAACA--------------------C--ACACACACA..19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACACAC---------A----CAAACA--------------------C--ACACACA....22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACACACACA--CACAC----------------------------------ACACACACA.........................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACACAC---------A----CAAACA--------------------C--ACACAC.....21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAC---------A----CAAACA--------------------C--ACACA......18200.0510000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACACA--CACAC----------------------------------ACACACACACAC---------A----CAAAC...................................29200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA--C--ACACAC----ACACACACACA--CAC......................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACACACACA--C--ACACAC----ACAC..................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
droSim2
GCTTA------------------------------------------G----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-----TAAAC--ACGCCCACCCA--C--CACCAC----ACGCCCGCCCA--CACAC----------------------------------ACGAACACACAA---------A----TACATG--------------------T--GAACACACGCGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
GGGCA------------------------------------------ACAATTATCTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCAA-CCATC-TTTTAGTTGGGTGGTTATTTTGCAAAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-----A-----T--ACTCACGCA------CTC--ACACAC----AC----------A--------CA------------CACACACACACACA--------CA-----CACACACACACAAACACACG--------------------C-----------CTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
TATTCC-----------------------------------------CAGG-TAATTTGCAAC-----TTTCAGATTG-----------------------------CCATACATTTAAAACAAGAGAGAACGCTGTAGTCGAGTTT-CTCGACTATCTGATACCCGTTACTCAGCGG----GCT---GCTACCG---------------------------------------------------------------------------------------------CAC----CAAAATTTAG-----------AAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT--TAC-------AAGACCAATACAAAA--A------------------------------------------TGAAAAAATAC------CGAAA-----------------------------------------CA-TTTTT--------------------C--AAAAGTGTGGGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................................................................................................................AACGCTGTAGTCGAGTTT-CTCT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100100000000
.................................................................................................................................................TT-CTCGACTATCTGATACCCGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05110000000000
...........................................................................................................................AGAGAGAACGCTGTAGTCGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100000010000
....................................................................................................................................................CTCGACTATCTGATACCCGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05110000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-----------------------------------------CA-TTTTT--------------------C--AAAAGTGTGG.20200.05101000000000
droEre2
AAACA----------------------------------------------------------------------------------------------------------------------AGATAGAATGCTATAGTCGAGTTC-CGCGACTATCAGATACCCGTTACTCTTGTG----GAAG-TGCAAACG-----------------------------------------------------------------------------------------------------------------------------------------------AGAAATTTTAACATTTT---------------------------------------------------------------------------------------------CCGGAATGCCCGAAGAAA--------------------------------TTGGGAC-------AAAACTAATAAAATG--A------------------------------------------AAAAA-----------------------------------------------GAAAACATAAAAA-GTGTG--------------------T--TTAAATGTGTGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/18/2015 at 02:58 AM