ID:

dmo_2578

 Coordinate:

scaffold_6680:23358013-23358163 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [dmoj_GLEANR_13844:2]; CDS [Dmoj\GI13950-cds]; intron [Dmoj\GI13950-in]

Repeatable elements

NameClassFamilyStrand
Helitron-1_DAnaRCHelitron-
AT_richLow_complexityLow_complexity+

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CAGCAAACGCGTTCCATAGCACAGTTTTGGTTGGTTTAAATTTCTAAGCATGATAACTACCGGCCAACACTTATAGTAAATTAGTTATTTTGTATTTAAGTACAAAATATTCCCTAGAAATAATGGATAATGGATAAGCAACGTTTGCCGGGTTAGCTAGTTATTTATTTATTTAATATATTTTTTATTTATATTTTATAGAGTACTGGCACTATACAGTTTTTTGCTGATTATGAAAAATCTGCTGGAAA
**************************************************.(((((((((((((.(((.(((((.....((((..((((((((((....))))))))))..................))))..)))))....))).)))))......))))))))...((((..((((((.........))))))..))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body
..GCAAACGCGTTCCATAGCACAGTTTTG.............................................................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0
......................................................................................................................................................................................................................................TTATGAAAAATCTGCTGGA.. 19 0 1 1.00 1 1 0 0
..................................................................................................................................................................................................CTTTCAGAGTACTGGCACTAT.................................... 21 3 3 0.33 1 0 1 0
.........................TTTGGTTGGTTTAAATTTCTA............................................................................................................................................................................................................. 21 0 20 0.15 3 0 0 3
.......................................ATTTCTAAGCATGATAACTAC............................................................................................................................................................................................... 21 0 20 0.10 2 2 0 0
..............................TTGGTTTAAATTTCTAAGCATGATAAC.................................................................................................................................................................................................. 27 0 20 0.05 1 0 1 0
...........................TGGTTGGTTTAAATTTCTAAG........................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0
........................TTTTGGTTGGTTTAAATTTCT.............................................................................................................................................................................................................. 21 0 20 0.05 1 0 0 1

Anti-sense strand reads

GTCGTTTGCGCAAGGTATCGTGTCAAAACCAACCAAATTTAAAGATTCGTACTATTGATGGCCGGTTGTGAATATCATTTAATCAATAAAACATAAATTCATGTTTTATAAGGGATCTTTATTACCTATTACCTATTCGTTGCAAACGGCCCAATCGATCAATAAATAAATAAATTATATAAAAAATAAATATAAAATATCTCATGACCGTGATATGTCAAAAAACGACTAATACTTTTTAGACGACCTTT
**************************************************.(((((((((((((.(((.(((((.....((((..((((((((((....))))))))))..................))))..)))))....))).)))))......))))))))...((((..((((((.........))))))..))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 V049
head
 M060
embryo
..............................................................................................................................................................................................................................AAACGACTAATACTTTTTAGACGACCT.. 27 0 1 1.00 1 1 0 0 0
.................................................................................................................................................................................................................................CGACTAATACTTTTTAGACGACCTTT 26 0 1 1.00 1 1 0 0 0
..............................................TCGTACTATTGATGGCCGGTTGTGAATAT................................................................................................................................................................................ 29 0 1 1.00 1 0 1 0 0
...........................................................................................CATAAATTCATGTTTTATAAGGGATCT..................................................................................................................................... 27 0 3 0.33 1 0 1 0 0
............................CCAACCAAATTTAAAGATTCGTACT...................................................................................................................................................................................................... 25 0 20 0.25 5 5 0 0 0
......................................................................................................GTTTTATAAGGGATCTTTATTACCTAT.......................................................................................................................... 27 0 5 0.20 1 1 0 0 0
....................................................................................................ATGTATTACACGGGATCTTT................................................................................................................................... 20 3 15 0.07 1 0 0 1 0
................................................................................................................................................AACGGCCTATTCGGTCAAT........................................................................................ 19 3 19 0.05 1 0 0 1 0
.TCGTTTGCGGAAGGTAACG....................................................................................................................................................................................................................................... 19 2 20 0.05 1 1 0 0 0
...............................ACCAAATTTAAAGATTCGTACTA..................................................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0
..............................AACCAAATTTAAAGATTCGTACT...................................................................................................................................................................................................... 23 0 20 0.05 1 0 0 0 1
..................CGTGTCAAAACCAACCCAATTT................................................................................................................................................................................................................... 22 1 20 0.05 1 0 0 0 1
..........................AACCAACCAAATTTAGAGATTCGTACT...................................................................................................................................................................................................... 27 1 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6680:23357963-23358213 + dmo_2578 CAGCAAACGCGTTCCATAGCACAGTTTTGGTTGGTTTAAA-----------------------TTTCTAAGCATGATAACTACCGGC----CAAC-ACTTATAGTAAATTAGTTATTTTGTATTT--AAGTACAAAATATTCCCTAGAAATAATGGATAA------------------------------TGGATAAGCAACGTTTGCCGGGTTAGCTAGTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT------------------------ATTTA------------------------------------------TTTAATATATTTTTTATTT----------------------------------------------------------------------------------------------ATATTTTATAGAGTACTGGCACTATACAGTTTTTTGCTGATTATGAAAAATCTGCTGGAAA
droVir3 scaffold_13516:58-139 - TTTGTTT-AT------------------------------TTA---TTTATTTATTT--------------------ATT---T----------------------------------------------------------------------------------------------------------------------ATTTATTTATTTATTTATTTAT------------------------ATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATATATT-----------------------------------------------------------------------------------------------------------------------------TATATATTTATT------------TATTTA-------TT
droGri2 scaffold_15074:3303243-3303393 + ACATAAA-GT------------------------------AAAATGTTTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTATTTCAAAAAACTTCCGATTTTTTCTTTAGACATAAATAATGAATAA---------------------------------------------------------------------------------------------------------------GCTTTTAATCTTAAAAACTCGCATGACAG--------------------------------------------------------------------------------------------------------------------------------ACTTAAATCT--------------------------------GT-------------------------------------------------TATATTTTTTATTT----------------------------------------------------------------------------------------------TTATTATTTTGAGCATTGAC--------------------G----------T-------TA
droWil2 scf2_1100000001828:2883-3107 - CAACAAACGCTTTCCACTGCACAGTTTTGGTTGGTTTAAA-----------------------TTTCTAAGCATTAACCC---GGCACATCCA----------------------------------------------------------------AGG------------------------------AGTTTAAATAAAATAGT------------------------------------------------------------------------------------CATTCGACCAA------------------------------------------------------------------------------------------------------------------------------------------------CATTGAATATACACTTGCAAACG----CAATGTACCTTGA-------------------------TTCAACC-----------GGT------------AAAAATTGTATTTTAGAACACCTAATACGTTAACGGGCATTGA-------------------------------TCTTACA---ATTCAATAAATTTTTCATTT----------------------------------------------------------------------------------------------TGATATTA-------------------------------------------T-------AG
dp5 4_group1:2928187-2928327 - TTATAAATATAT------------------------------A---TTTAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATATTT--------------------------------------------------------------------------------------AATAATAATT-----------------TAATCATTTATATTTAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATAAATAGTTAATTTATAT--------------------TTCATGAA-------------------------------TAAATATTTAAATTATATTTATTAAATACATTTTTAATTT----------------------------------------------------------------------------------------------ATATTTAA-------------------------T------------AAATTG-------TT
droPer2 scaffold_88:21217-21364 + TAGTAGATTA------------------------------------ATTGTTATTATTATTA-------AGTATG--GAC-------------------TATC--------------------------------------AAA------------------------------------------------------------------------------------------------------------------------------------------AAATATGTATGTATATTAGTCGTAATGTTTACCAAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG-------------------------------CAAACAC----------------------------------------------TTCTTT---------------------------------------------------------------------------------TACAGAGCACCGGTACCATACAGTTGTTTGCCGATTACGAGAAGTCCGCTGGAAA
droAna3 scaffold_13248:4432943-4433084 + ATACTTA-CA------------------------------ATA---AGTAAACTATT--------------------TTT---T-------------------------------------GTCT--A--CACTAGAAATTACTAGGAAATTATTTA-TA------------------------------TGGCAAAACAACGTTTGCCGGGTCAGCTAGTT-T------------------------ATTTATATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTATATG----AAAACTTCCCCAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------C---------------------------------------------GTA-----------------------------------------------TATTTT--------------------------------AA----------A-------GA
droBip1 scf7180000395056:22328-22481 + CCAACTC-TT------------------------------ATA---ATTGTT---------A-------AATGTT--TGT--------------------------------------TGTAATTTAA--AACTAGA------------------AAAAA------------------------------GGGAAAAACAACGTTTGCCGGGTTAGCTAGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T------------------------------------T----TGTCTAAA----AACCTACC-------------------------------------------------------------------------------------------------------------------------------------GC---------------------------------------------------AT-----------ATTGACCGCATATAGAACATTTTACATTCTTCGGCTA-----------------------------------------TATAT-------------------AGTTTT-------CT
droKik1 scf7180000302471:151856-151985 - TTTTTTG-TT------------------------------AAA---GAC---------------------------------------------------------------------------------------------------------------------------------------------A----------------------------------------------------------------------AATAATATATTAAAGATTTAATAAATTGAATGTATAAAAAA------------------------------------------------------------------------------------------------------------------------------------------------TATAAGT-------------TGT----GTAA-------------------------------------------------------------------------------TT------------------------ATTTT------------------------------------------TTTAATATAATTTTTAAAT-------------------------AG-----------ATTTATTACAGGGCGAA----------------------------------------------------------ACTTG---------T------------ACAGTA-------TT
droFic1 scf7180000452169:3566-3669 - AAATTTT-GT------------------------------ACA---GAAATT------ATAA---------------------------------------------------------------------------------------A-GTCATCTGG------------------------------TGGCAAAACAACGTTTGCCGGGTCAGCTAGTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T------------------------------------T----AGTATAGA----TTCCTAAC-------------------------------------------------------------------------------------------------------------------------------------TA---------------------------------------------------AT-----------ATTTATAGTA----------------------------------------------------C----------------AT--------------AC----------A-------GT
droEle1 scf7180000491025:16911-17083 + AGTAATG-GC------------------------------ATTTTGACAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTAT--------------------------------------------------------------------------------------AGTAATGACT-----------------AAATATTTCAGAATTACGGTTTAAATTTCAATTAAATCGGACGACTTTATCGTAT-AGCTCCCATGGAAA-------------CAATAAAAATATATAAAAATTTTTATT-------------A------------------------------------------------------------------------------------ATGTAAC------------------------TTT-------------------------------------------------GATATTTTTTATTT----------------------------------------------------------------------------------------------TTATTTTT-------------------------T------------AAATTA-------TT
droRho1 scf7180000766191:3072-3214 + AACACTA-AA------------------------------AAGA--------------------------------------------------------------ATTTAGTTATAATACAGTT--AATTATAAAATATTTTA------------------------------------------------------------------------------------------------------------------------------------------TGAAAGAAAAGTATAAAAAATATATTGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCCCCTGACAAAGCTCGTCTTTTTTTGGT-TTTTAA----GAATATTA----------ATATTTC--------------------------------CATTTTT----------------AA--------------AG----------A-------GT
droBia1 scf7180000301746:18553-18677 + AGACATT-AT------------------------------CGA------------------------------------------------------------------------------------------------------------------AGG------------------------------AGGCGGAACAAAGTTGGCCGGGTCAGCTAGTTAT------------------------ATATATACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATATATT----ATAAATACTTCAAATTTATAAAATCTATGCAGACGTGTCTTAGTTGAGAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-------------------------------------------------A--------------------------------AA----------A-------AA
droTak1 scf7180000415386:178121-178268 - TGGCTTA-AA------------------------------TTA---GGTATTACGGT--------------------TTT---TGGA----TACC-CTTTACCGTAAATTCGTTATACTATATTT--TGTTATACTATATTTTCTTAAAA-GGGATATGA------------------------------TTAATAAAGAACATCTACGGAATTAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCT--------------------------------AT-------------------------------------------------CATTAATTTAGCT-----------------------------------------------------------------------------------------------------C----------------AA--------------AA----------T-------AT
droEug1 scf7180000409566:2200-2350 + AGTTTTG-GT------------------------------AAAATGGCTT---------------------------------------------------------------------------------------------------G-GCTTTCCAATGGACGAAGCCAGCTGTGTAAATAAAGATGA----------------------------------------------------------------------AATTTTATATAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTCAAAATAAAAAATTAAATAATTCATTTTAATTTGTGTTTT------------------------ATTGA------------------------------------------TTTTCTAATTTTTTTATTT----------------------------------------------------------------------------------------------TAATTTT--------------------------------------------A-------TA
dm3 chr3R:441724-441824 - AACATTT-GA------------------------------AGCGTGTTTGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT------------------------ATTTATTCATTATATTATTCATTTTTTATTCA---------------T----TATACTTGCTGGCT-------------------------------------------------------------------------------------------------------------TTCGTGTTATACAACTTGTCGTTCAT----------T-------GT
droSim2 siII:16899-17093 - AATAAAT-TA------------------------------TTTATTTTAATT------ATAAATTTATAAATATT---------AAT----AATT-----------------------------------------------------------------------------------------------------------------------------------------------------------CTTTAG-TATAAT-------------------AAATAAATATAAATTTTAAT-------------------------------------------------------------------------------------------TATAAAAATTAAATTTTCAGATTTAGTGATTAA------------------------------------A----ATT-----AA-------------------------------------------------------------------------------TT------------------------ATTTA------------------------------------------TTAAATTT------------------------ATTTTTTATAAAA-TTTTAATAAAAAATAAAA----------TTATTTTTATTTGTTAATTT-----------------------T-------------------------------------TTAAAAAATT-------TA
droSec2 scaffold_4238:1718-1802 + GACTAATCGCGTACCGTTGCACAGCCGGGTTGGGTTCAAA-----------------------TTACGAAGCAAGATAAT---TGGAGATCCAACCTTTAATTGTAAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA
droYak3 3L:20576181-20576324 + AACGTAT-AT------------------------------ACA---CCATAT----------------------------------------------------------------------------------------------------------------------------------------------------------GCCCACTC------------------------------------------------------------------------------------------------------AGAGATAACTTTCTAGTTCTTATTTTTCAACTATTCATTTTTAA-------TCA-------TA-------------------------------------------------------------------------------------------------------------------------------------------------------A-----------------------------------------------------------------------------CGAATGG----------------------------------------------CTTTTT---------------------------------------------------------------------------------TATAGGCCACCGGAACCATCCAATTCTTTGCTGACTACGAAAAGTCCATTGGAAA
droEre2 scaffold_4784:22621801-22621982 - CAATAAACAGGTTGC----------------------------ATATTTGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT----------------------------------------------------------------------------------------------------------------TATTTTATAAATATCAGTTTTTAA-------ATATGAATTATTTT------------TATAAAAAA--------------------------------------------TATATAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T------------------------ATTTTTTTGAAAA-ATGTATGTAAAATTAAAAAAATGTTTAGCCTATGAAGTTTTTTAACTATTTAGTATATTTATTAGTAGAAATTACTAGTGT---------AC--------------AG----------G-------TA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
CAGCAAACGCGTTCCATAGCACAGTTTTGGTTGGTTTAAA-----------------------TTTCTAAGCATGATAACTACCGGC----CAAC-ACTTATAGTAAATTAGTTATTTTGTATTT--AAGTACAAAATATTCCCTAGAAATAATGGATAA------------------------------TGGATAAGCAACGTTTGCCGGGTTAGCTAGTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT------------------------ATTTA------------------------------------------TTTAATATATTTTTTATTT----------------------------------------------------------------------------------------------ATATTTTATAGAGTACTGGCACTATACAGTTTTTTGCTGATTATGAAAAATCTGCTGGAAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..GCAAACGCGTTCCATAGCACAGTTTTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATGAAAAATCTGCTGGA..1911.001100000
.........................TTTGGTTGGTTTAAA-----------------------TTTCTA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.153000003
.......................................A-----------------------TTTCTAAGCATGATAACTAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102200000
..............................TTGGTTTAAA-----------------------TTTCTAAGCATGATAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000010
...........................TGGTTGGTTTAAA-----------------------TTTCTAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
........................TTTTGGTTGGTTTAAA-----------------------TTTCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000001
droVir3
TTTGTTT-AT------------------------------TTA---TTTATTTATTT--------------------ATT---T----------------------------------------------------------------------------------------------------------------------ATTTATTTATTTATTTATTTAT------------------------ATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATATATT-----------------------------------------------------------------------------------------------------------------------------TATATATTTATT------------TATTTA-------TTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droGri2
ACATAAA-GT------------------------------AAAATGTTTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTATTTCAAAAAACTTCCGATTTTTTCTTTAGACATAAATAATGAATAA---------------------------------------------------------------------------------------------------------------GCTTTTAATCTTAAAAACTCGCATGACAG--------------------------------------------------------------------------------------------------------------------------------ACTTAAATCT--------------------------------GT-------------------------------------------------TATATTTTTTATTT----------------------------------------------------------------------------------------------TTATTATTTTGAGCATTGAC--------------------G----------T-------TASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
CAACAAACGCTTTCCACTGCACAGTTTTGGTTGGTTTAAA-----------------------TTTCTAAGCATTAACCC---GGCACATCCA----------------------------------------------------------------AGG------------------------------AGTTTAAATAAAATAGT------------------------------------------------------------------------------------CATTCGACCAA------------------------------------------------------------------------------------------------------------------------------------------------CATTGAATATACACTTGCAAACG----CAATGTACCTTGA-------------------------TTCAACC-----------GGT------------AAAAATTGTATTTTAGAACACCTAATACGTTAACGGGCATTGA-------------------------------TCTTACA---ATTCAATAAATTTTTCATTT----------------------------------------------------------------------------------------------TGATATTA-------------------------------------------T-------AGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................................................................TCTAAGCATTAACCC---GGCACATCCA----------------------------------------------------------------AG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2750.60302010
.................TGCACAGTTTTGGTTGGTTTAAA-----------------------T...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.551102090
...................................................................TAAGCATTAACCC---GGCACATCCA----------------------------------------------------------------AGG------------------------------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2650.40202000
.................TGCACAGTTTTGGTTGGTTTAAA-----------------------TT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.40808000
.................TGCACAGTTTTGGTTGGTTTAAA-----------------------TTTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.25504010
................................................................TTCTAAGCATTAACCC---GGCACATCCA----------------------------------------------------------------AG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2850.20101000
...................................................................TAAGCATTAACCC---GGCACATCCA----------------------------------------------------------------AG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2550.20100010
...................................................................TAAGCATTAACCC---GGCACATCCA----------------------------------------------------------------AGG------------------------------AG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2850.20101000
...................................................................TAAGCATTAACCC---GGCACATCCA----------------------------------------------------------------AGG------------------------------A....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2750.20101000
..........................................................................TAACCC---GGCACATCCA----------------------------------------------------------------AGG------------------------------AGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2260.17101000
................................................................TTCTAAGCATTAACCC---GGCACATCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2560.17101000
................................GGTTTAAA-----------------------TTTCTAAGCATTAACCC---GG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2770.14101000
........................TTTTGGTTGGTTTAAA-----------------------TTTCTAAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.10200020
..........................TTGGTTGGTTTAAA-----------------------TTTCTAAGCATTAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28170.06101000
...........TTCCACTGCACAGTTTTGGTTGGTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25190.05101000
.............CCACTGCACAGTTTTGGTTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21190.05101000
.................TGCACAGTTTTGGTTGGTTTAAA-----------------------TTT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100010
........................TTTTGGTTGGTTTAAA-----------------------TTTCTAAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
..................GCACAGTTTTGGTTGGTTTAAA-----------------------TTTC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05101000
...........................................................................................................................................................................................................TAGT------------------------------------------------------------------------------------CATTCGACCAA------------------------------------------------------------------------------------------------------------------------------------------------CATTGAATA............................................................................................................................................................................................................................................................................................................................................................24200.05101000
dp5
TTATAAATATAT------------------------------A---TTTAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATATTT--------------------------------------------------------------------------------------AATAATAATT-----------------TAATCATTTATATTTAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAATAAATAGTTAATTTATAT--------------------TTCATGAA-------------------------------TAAATATTTAAATTATATTTATTAAATACATTTTTAATTT----------------------------------------------------------------------------------------------ATATTTAA-------------------------T------------AAATTG-------TTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
TAGTAGATTA------------------------------------ATTGTTATTATTATTA-------AGTATG--GAC-------------------TATC--------------------------------------AAA------------------------------------------------------------------------------------------------------------------------------------------AAATATGTATGTATATTAGTCGTAATGTTTACCAAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG-------------------------------CAAACAC----------------------------------------------TTCTTT---------------------------------------------------------------------------------TACAGAGCACCGGTACCATACAGTTGTTTGCCGATTACGAGAAGTCCGCTGGAAASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
ATACTTA-CA------------------------------ATA---AGTAAACTATT--------------------TTT---T-------------------------------------GTCT--A--CACTAGAAATTACTAGGAAATTATTTA-TA------------------------------TGGCAAAACAACGTTTGCCGGGTCAGCTAGTT-T------------------------ATTTATATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTATATG----AAAACTTCCCCAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------C---------------------------------------------GTA-----------------------------------------------TATTTT--------------------------------AA----------A-------GASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................................................................................................................................................CAACGTTTGCCGGGTCAGCTAGTT-T------------------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
........................................................................................................................................................ATTTA-TA------------------------------TGGCAAAACAACGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
....................................................................................................................................................................................................AACAACGTTTGCCGGGTCAGCTAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.501100000
.....................................................................................................................................................................................................ACAACGTTTGCCGGGTCAGCTAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.501010000
...................................................................................................................................................................................................AAACAACGTTTGCCGGGTCAGCTAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.501010000
...........................................................................................................................................................TA-TA------------------------------TGGCAAAACAACGTTTGCCGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2550.201100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATATG----AAAACTTCCCCAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------C---------------------------------------------GTA-----------------------------------------------............................................................2560.171010000
droBip1
CCAACTC-TT------------------------------ATA---ATTGTT---------A-------AATGTT--TGT--------------------------------------TGTAATTTAA--AACTAGA------------------AAAAA------------------------------GGGAAAAACAACGTTTGCCGGGTTAGCTAGTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T------------------------------------T----TGTCTAAA----AACCTACC-------------------------------------------------------------------------------------------------------------------------------------GC---------------------------------------------------AT-----------ATTGACCGCATATAGAACATTTTACATTCTTCGGCTA-----------------------------------------TATAT-------------------AGTTTT-------CTSizeHit CountTotal NormTotal
No Reads
droKik1
TTTTTTG-TT------------------------------AAA---GAC---------------------------------------------------------------------------------------------------------------------------------------------A----------------------------------------------------------------------AATAATATATTAAAGATTTAATAAATTGAATGTATAAAAAA------------------------------------------------------------------------------------------------------------------------------------------------TATAAGT-------------TGT----GTAA-------------------------------------------------------------------------------TT------------------------ATTTT------------------------------------------TTTAATATAATTTTTAAAT-------------------------AG-----------ATTTATTACAGGGCGAA----------------------------------------------------------ACTTG---------T------------ACAGTA-------TTSizeHit CountTotal NormTotal
No Reads
droFic1
AAATTTT-GT------------------------------ACA---GAAATT------ATAA---------------------------------------------------------------------------------------A-GTCATCTGG------------------------------TGGCAAAACAACGTTTGCCGGGTCAGCTAGTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T------------------------------------T----AGTATAGA----TTCCTAAC-------------------------------------------------------------------------------------------------------------------------------------TA---------------------------------------------------AT-----------ATTTATAGTA----------------------------------------------------C----------------AT--------------AC----------A-------GTSizeHit CountTotal NormTotal
No Reads
droEle1
AGTAATG-GC------------------------------ATTTTGACAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGGTAT--------------------------------------------------------------------------------------AGTAATGACT-----------------AAATATTTCAGAATTACGGTTTAAATTTCAATTAAATCGGACGACTTTATCGTAT-AGCTCCCATGGAAA-------------CAATAAAAATATATAAAAATTTTTATT-------------A------------------------------------------------------------------------------------ATGTAAC------------------------TTT-------------------------------------------------GATATTTTTTATTT----------------------------------------------------------------------------------------------TTATTTTT-------------------------T------------AAATTA-------TTSizeHit CountTotal NormTotal
No Reads
droRho1
AACACTA-AA------------------------------AAGA--------------------------------------------------------------ATTTAGTTATAATACAGTT--AATTATAAAATATTTTA------------------------------------------------------------------------------------------------------------------------------------------TGAAAGAAAAGTATAAAAAATATATTGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGCCCCTGACAAAGCTCGTCTTTTTTTGGT-TTTTAA----GAATATTA----------ATATTTC--------------------------------CATTTTT----------------AA--------------AG----------A-------GTSizeHit CountTotal NormTotal
No Reads
droBia1
AGACATT-AT------------------------------CGA------------------------------------------------------------------------------------------------------------------AGG------------------------------AGGCGGAACAAAGTTGGCCGGGTCAGCTAGTTAT------------------------ATATATACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATATATT----ATAAATACTTCAAATTTATAAAATCTATGCAGACGTGTCTTAGTTGAGAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-------------------------------------------------A--------------------------------AA----------A-------AASizeHit CountTotal NormTotal
No Reads
droTak1
TGGCTTA-AA------------------------------TTA---GGTATTACGGT--------------------TTT---TGGA----TACC-CTTTACCGTAAATTCGTTATACTATATTT--TGTTATACTATATTTTCTTAAAA-GGGATATGA------------------------------TTAATAAAGAACATCTACGGAATTAT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCT--------------------------------AT-------------------------------------------------CATTAATTTAGCT-----------------------------------------------------------------------------------------------------C----------------AA--------------AA----------T-------ATSizeHit CountTotal NormTotal
No Reads
droEug1
AGTTTTG-GT------------------------------AAAATGGCTT---------------------------------------------------------------------------------------------------G-GCTTTCCAATGGACGAAGCCAGCTGTGTAAATAAAGATGA----------------------------------------------------------------------AATTTTATATAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTCAAAATAAAAAATTAAATAATTCATTTTAATTTGTGTTTT------------------------ATTGA------------------------------------------TTTTCTAATTTTTTTATTT----------------------------------------------------------------------------------------------TAATTTT--------------------------------------------A-------TASizeHit CountTotal NormTotal
No Reads
dm3
AACATTT-GA------------------------------AGCGTGTTTGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT------------------------ATTTATTCATTATATTATTCATTTTTTATTCA---------------T----TATACTTGCTGGCT-------------------------------------------------------------------------------------------------------------TTCGTGTTATACAACTTGTCGTTCAT----------T-------GTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTATTCA---------------T----TATACTTGCTGGCT-------------------------------------------------------------------------------------------------------------TT............................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCTGGCT-------------------------------------------------------------------------------------------------------------TTCGTGTTATACAAC...............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AATAAAT-TA------------------------------TTTATTTTAATT------ATAAATTTATAAATATT---------AAT----AATT-----------------------------------------------------------------------------------------------------------------------------------------------------------CTTTAG-TATAAT-------------------AAATAAATATAAATTTTAAT-------------------------------------------------------------------------------------------TATAAAAATTAAATTTTCAGATTTAGTGATTAA------------------------------------A----ATT-----AA-------------------------------------------------------------------------------TT------------------------ATTTA------------------------------------------TTAAATTT------------------------ATTTTTTATAAAA-TTTTAATAAAAAATAAAA----------TTATTTTTATTTGTTAATTT-----------------------T-------------------------------------TTAAAAAATT-------TASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................................................................................................................................................................................................................................................................................................................................ATTAAATTTTCAGATTTAG................................................................................................................................................................................................................................................................................................................................................................................................1919.00940300000002000000
...............................................................................................................................................................................................................................................................................................................................................................................................................AATTAAATTTTCAGATTTAG................................................................................................................................................................................................................................................................................................................................................................................................2014.00400040000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TAAAAATTAAATTTTCAGATTTAG................................................................................................................................................................................................................................................................................................................................................................................................2413.00330000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................TTAAATTTTCAGATTTAG................................................................................................................................................................................................................................................................................................................................................................................................1813.00301000000002000000
............................................................................................................................................................................................................................................................................................................................................................................................................AAAAATTAAATTTTCAGATTTAG................................................................................................................................................................................................................................................................................................................................................................................................2312.00200020000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................AATTAAATTTTCAGATTTAGT...............................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................ATAAAAATTAAATTTTCAGATTTAGA...............................................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTCAGATTTAGTGATT...........................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCAGATTTAGTGATT...........................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................AAAAATTAAATTTTCAGATT...................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................TATAAAAATTAAATTTTCAGATTTAG................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
.............................................................................................................................................................................................................................................................................................................T-------------------------------------------------------------------------------------------TATAAAAATTAAATTTTCAGATTTAG................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTCAGATTTAGTGAT............................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TAAATTTTCAGATTTAGT...............................................................................................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
.....................................................................................................................................................................................................................................................................AT-------------------AAATAAATATAAATTTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................ATAAAAATTAAATTTTCAGATTTAG................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
..........................................................................................................................................................................................................................................................CTTTAG-TATAAT-------------------AAATAAATATAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................TTAAATTTTCAGATTTAGA...............................................................................................................................................................................................................................................................................................................................................................................................1920.50100000010000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................TAAATTTTCAGATTTAGC...............................................................................................................................................................................................................................................................................................................................................................................................1820.50110000000000000000
........................................TTTATTTTAATT------ATAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1750.20100000000100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................AAATTTTCAGATTTAGA...............................................................................................................................................................................................................................................................................................................................................................................................1760.17100000010000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................AATTAAATTTTCAGATTTAGAAC.............................................................................................................................................................................................................................................................................................................................................................................................2360.17101000000000000000
droSec2
GACTAATCGCGTACCGTTGCACAGCCGGGTTGGGTTCAAA-----------------------TTACGAAGCAAGATAAT---TGGAGATCCAACCTTTAATTGTAAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
AACGTAT-AT------------------------------ACA---CCATAT----------------------------------------------------------------------------------------------------------------------------------------------------------GCCCACTC------------------------------------------------------------------------------------------------------AGAGATAACTTTCTAGTTCTTATTTTTCAACTATTCATTTTTAA-------TCA-------TA-------------------------------------------------------------------------------------------------------------------------------------------------------A-----------------------------------------------------------------------------CGAATGG----------------------------------------------CTTTTT---------------------------------------------------------------------------------TATAGGCCACCGGAACCATCCAATTCTTTGCTGACTACGAAAAGTCCATTGGAAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
CAATAAACAGGTTGC----------------------------ATATTTGTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT----------------------------------------------------------------------------------------------------------------TATTTTATAAATATCAGTTTTTAA-------ATATGAATTATTTT------------TATAAAAAA--------------------------------------------TATATAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T------------------------ATTTTTTTGAAAA-ATGTATGTAAAATTAAAAAAATGTTTAGCCTATGAAGTTTTTTAACTATTTAGTATATTTATTAGTAGAAATTACTAGTGT---------AC--------------AG----------G-------TASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTTTTTAACTATTT.............................................................................16200.3570000007
.AATAAACAGGTTGC----------------------------ATATT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1970.1410001000

Generated: 05/18/2015 at 02:52 AM