ID:

dmo_2521

Coordinate:

scaffold_6680:17559086-17559236 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-2.7 -1.9 -1.8

Flybase annnotation

exon [dmoj_GLEANR_13581:3]; CDS [Dmoj\GI13673-cds]; intron [Dmoj\GI13673-in]

Repeatable elements

NameClassFamilyStrand
(CAA)nSimple_repeatSimple_repeat+

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GTAAGCCCAATGGACCTGGCGGCGGTGGCATGGAACAACAGTCACAGCAGGTAATGAACTAAAAGCCAAAAGCAAACAAACACCAACGATAACAACCACAACATCATCAACAACAACAACTACTACTACATCTTTAACAACAAGCAGTACTGCAAAAACAACAATAATAACAACATCAACAACAACAGGGTGGCTTTCGGTGGCGGCAACTACAAACTAACGAGAATAATACATTAAACTGTGCTCATAAT
************************************************************************************************************************......................(((....(((.................................)))....)))********************************************************
Read size # Mismatch Hit Count Total Norm Total M046
female body
V041
embryo
V110
male body
V056
head
V049
head
........................................................................................................................TACTACTACATCTTTAACAACA............................................................................................................. 22 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................ATCAACAACAACAGGGTGGCT........................................................ 21 0 1 1.00 1 1 0 0 0 0
...........................................................................................................CAACAACAACAACTACTACTACATCTTT.................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................................................GGCAACTACAAACTAACGAGA.......................... 21 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................AACAACAACAGGGTGGCTTTCGGTG................................................. 25 0 1 1.00 1 1 0 0 0 0
.........................................................................................TAACAACCACAACATCATCAAC............................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0
.........................................TCACAGCAGGTAATGAACTAAAAGC......................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
............GACCTGGCGGCGGTGGCATGG.......................................................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0
..................................ACAACAGTCACAGCAGGTA...................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................................................................TAATACATTAAACTGTGCT...... 19 0 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................................................TTCGGTGGCGGCAACTACAAACT................................. 23 0 1 1.00 1 1 0 0 0 0
..................................ACAACAGTCACAGCAGGTAATGAACT............................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
................................................................................................................................................................................................................................AATAATACATTAAACTGTGCT...... 21 0 1 1.00 1 1 0 0 0 0
...........................................ACAGCAGGTAATGAACTAAAA........................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
...................................................................AAAAGCAAACAAACACCAAC.................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
............................................CAGCAGGTAATGAACTAAAAGCC........................................................................................................................................................................................ 23 0 1 1.00 1 0 1 0 0 0
............................CCTGGAACAACAGTCAATGCA.......................................................................................................................................................................................................... 21 3 7 0.29 2 2 0 0 0 0
...........................................................................................................................................ACAATCAGTACTGCGCAAACA........................................................................................... 21 3 4 0.25 1 0 0 0 1 0
...........................................................................................................................................ACAATCAGTACTGGACAAACA........................................................................................... 21 3 4 0.25 1 0 0 0 1 0
.....................................................................................................................................................................AATAACAACATCAACAACAAC................................................................. 21 0 8 0.13 1 1 0 0 0 0
............GACCTGGGGGCGGTGGCGGGG.......................................................................................................................................................................................................................... 21 3 15 0.07 1 0 0 0 0 1

Anti-sense strand reads

CATTCGGGTTACCTGGACCGCCGCCACCGTACCTTGTTGTCAGTGTCGTCCATTACTTGATTTTCGGTTTTCGTTTGTTTGTGGTTGCTATTGTTGGTGTTGTAGTAGTTGTTGTTGTTGATGATGATGTAGAAATTGTTGTTCGTCATGACGTTTTTGTTGTTATTATTGTTGTAGTTGTTGTTGTCCCACCGAAAGCCACCGCCGTTGATGTTTGATTGCTCTTATTATGTAATTTGACACGAGTATTA
********************************************************......................(((....(((.................................)))....)))************************************************************************************************************************
Read size # Mismatch Hit Count Total Norm Total M046
female body
V110
male body
V056
head
............................GGACCTTGTTGTCAGTTACGT.......................................................................................................................................................................................................... 21 3 7 1.43 10 8 1 1
..............................ACCTTGTTGTCAGTTACGT.......................................................................................................................................................................................................... 19 2 7 0.14 1 1 0 0
............................GGACCTTGTTGTCAGTTT............................................................................................................................................................................................................. 18 2 10 0.10 1 1 0 0
....................................................................................................TGTAGTAGTTGTTGTTGTTG................................................................................................................................... 20 0 15 0.07 1 0 1 0
..................CGCCGCCCCCCTAGCTTG....................................................................................................................................................................................................................... 18 3 20 0.05 1 1 0 0
.............................................................................................TTGATGCTGTAGTAGTTGTTG......................................................................................................................................... 21 2 20 0.05 1 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6680:17559036-17559286 + dmo_2521 GTAAGCCCAATGGACCTGGCGGCGGTGGCATGGAACAA---------CAG---TCACAGCAGGTAATGAACTAAAAGCC-------------------AAAAGCA-----------------------------------------------------A-----------------------ACAAACACCAACGATAACAACCACAACATCATCAACAACAACAACTA--CTACTA------------------------------------------------CATCT--------TTAACAACAAGCAGTACTGCA-AAA---ACAACAATAATAA---------------------CAACATCAACA-ACAA-------CAGGGTGGCTTTCGGTGGCGGCAAC--TAC--------------------------------AAACTAAC-GAGA------------ATAATACATTA---AAC-TGTGCT--C----ATA-AT
droVir3 scaffold_13049:22947354-22947621 + dvi_21063 GTAAACCCAATGGACCTGGCGGCGGCGGCATGGAGCAG---------CAG---TCACAGCAGGTAATGAACTAAAAGCC-------------------AAA---------------CA------------AACAAACAAAA--A-----------------------AAGAAAAACAAACAAACATACACCGACGATAACAAGCACATCATCAAGAACAACAACATCTT--------------------------------------------------------TAACA--------ACAACAACTAGCAGCACTGCA-AGA---ACA---ACAAAAA---CAA---------------TAACTATAACA-ACAA-------GAACATGGCTTTCGGTGGCGGCAAC--TAC--------------------------------AAACTAAC-G---------------AAAATGCATTA--AA-T-TGTGCTCAT----ATA-AT
droGri2 scaffold_15110:18221211-18221447 + GTAAGCCCAATGGACCTGGAG---GTGGCATGGAGCAG---------CAG---CCACAGCAGGTAATCAACTAGAAGCCAAACCAAAAACAAATCACCAACCCGTT-----------------------------------------------------A-----------------------------ACAACAAAAAC------A---------------ACAACCA-----ATA--------------------CAT-------------------------CATCA--------ACAACAACTAGCAGCCCTGCA-ACA---------------------------------------ACAACAATA-ATAA-------CAACTTGGCTTTCGGTGGCGGCAAA------CAA-CA----CAA------------------AAACTAAC-GA-A------------AAAACGCATTGAAGAGTATGCTCC--CCACAATA-AT
droWil2 scf2_1100000004511:8563618-8563863 - dwi_668 GGAAACCAAATGGCCCTGGTG---GTGGTTTGGAGCAG---------CAG---CCACAGCAGGTAATCAACTAAAAACC-------------------AAAACCAGCCATCAAGCTAC------------AACAACA-ACAACAATTTAACAACAAC--A-----------------------------ACCACGATAGC------A---------------ACAA-TA--------------------------ACC--ACTA-TCAGCATATAGAGAAGTGCA-----GCGCG---GTAAAAG-CAGCG-----GCA-------------GTAACAA---------------------CAACATCTACA-ACAACAAACATCAACA-------TGGTGGCGGCAAC--ACTAA------------------------------CAACAA--------------------ATATAAA-----------------------CTA-AA
dp5 XR_group6:5904923-5905172 - dps_3067 GGAAGCCGAATGGTCCTGGCG---GTGGTCTGGAGCAGCAGCAGCAGCAG---CCACAGCAGGTAATGAACTAATCACC-------------------------------A---CTGA------------CACAAATAGAA--AACATCGCCAAAGCAA----------------------------------------------------------------CATCCA-ACC-G--TAACAACAAAAAAGAACAACC--ACTAATCA------------------------------GCA--TGGCGGCG-----GCA-ACA---------ACAACAG---------------------CAAGAAATA--------------CTACT-------TGGTGTCGGCAAC--ATAGAAA-TA----GAAACACTCCCACTCCACACACAACTAAC-T---------------AAAAT--------------GCATT--C----ATA-AT
droPer2 scaffold_47:405098-405347 - dpe_1717 GGAAGCCGAATGGTCCTGGCG---GTGGTCTGGAGCAGCAGCAGCAGCAG---CCACAGCAGGTAATGAACTAATCACC-------------------------------A---CTGA------------CACAAATAGAA--AACATCGCCAAAGCAA----------------------------------------------------------------CATCCA-ACC-G--TAACAACAAAAAAGAACAACC--ACTAATCA------------------------------GCA-----TGGCG-----GCA-GCA------------ACAA---------------------CAACAGCAACA-AATA-------CTACT-------TGGTGTCGGCAAC--ATAGAAA-TA----GAAACACTCCCACTCCACACACAACTAAC-T---------------AAAAT--------------GCATT--C----ATA-AT
droAna3 scaffold_13417:2512874-2513093 - GCAATGCCAATGTCAGTGGTG---CCG-CCGGCAGCAA---------CAGCGGCTCTAACAG------TACCAGCAACA-------------------------------GCAACAGT------------AACACCA-GCAATAATAATACCAACAT------------------------------------------------------TAACAACAACAACAACAA--CAACAA------------------------------------------------CAATA--------ACAACAA-CAGCA-----GCA-ACA---ACA---ACAACAG---CAGCAGCAACAACAGCAACAGCGGCGAAA-ATA------------A-------TGGTGGAAGCAAC--AGCAG---CA----------------------------GCAAC-A-----------------ACAG--------------------C----AAC-AC
droBip1 scf7180000396360:664938-665204 + GGAAACCAAATGGCCCTG------GTGGTTTGGAACAG---------CAG---CCACAGCAGGTAATGAATTAATCAC----------------------------------ACCAGAAACTACAAAAGAA---ACT----ACATCTTCGCCAAAGCAAA-----------------------------ACTACGATAA------------------------CATCTG-ATTAGTTTAACAAGAAAAAAAAACATGC--ACTATTCA----------------------GAGCGAAAGC----ATTATCT-----GCA-TTA---------ATAATAA---------------------CAACGTCTACG-ATAG-------GAGCA----TCTTGGTGGCGGCCAA--T-AAAAA-C------AA------------------AAACTAACCC---------------AAAATGCGTTCAAAAGA-TGCATT--C----ACG-AT
droKik1 scf7180000302391:696549-696801 + GGAAACCGAATGGCCCTGGCG---GTGGTTTGGAGCAG---------CAGCCGCCACAGCAGGTAATGAACTAATCAC--------------------------------ACGACAGAA-C---------AACAACTTGAAACATCTTTGCCAAAGCAAAAAAAAAAAAGAACATGAAAT---------ACTACGATAACA----CA---------------GCATCT--------------------------------------------------------------------------------GCG-----GCA-ACT-TAACAACCACAACAACAGCAA---------------CAGTATCTACAAATAA-------CAACCT------GGGTGTCGGTCACACTTGAA-A-TTATAAGAA------------------------------AATAACAACTTAAAAAATGC------------------------ATA-AT
droFic1 scf7180000454113:2520373-2520606 + GGAAACCAAATGGCCCTGGCG---GTGGTTTGGAGCAG---------CAG---CCACAGCAGGTAATGAACTAATCACC-------------------------------ACAACCGA------------AACAACT-GAAACATCTTCGCCAAAGTAAA-----------------------------ACTACGATAAC------A---------------ACATCTG-ACTAGTA---------------------AA-------------------------CATCG--------GCAACAGCCAGTG-----GCA-GCC---------ATAACAA---------------------CAAGGTCTAC-----------------A------TGGGTGGTGGCCAC--TTAAAAAAAC----GAA------------------AAACTAAC-T---------------AAAGTGCACTG--AAGG-TGCATT--C----ATA-AA
droEle1 scf7180000491193:4054958-4055170 - GGAAACCGAATGGCCCTGGCG---GTGGTTTGGAGCAG---------CAG---CCACAGCAGGTAATGAACTAATCACC-------------------------------AGAACAAA------------AACAGTT-GAAACATCTTCGCCAAAGCAAA-----------------------------ACTACGATAA------------------------CATCTA-ACTAGTA---------------------AA-------------------------CATCG--------GCAACAACCGGCG-----GCA-ACC---------ATAACAA---------------------CAA---------------------------------GGTGGCGGTCAC--TTGAA------------------------------AAACTAAC-T---------------AAAATGCATTG--CAGA-TGTATT--C----ATA-AT
droRho1 scf7180000773422:146702-146928 + GGAAACCGAATGGTCCCGGCG---GTGGTTTGGAGCAG---------CAG---CCACAGCAGGTAATGAACTAATCACC-------------------------------AGAACAAA------------AACAACT-GAAACATCTTCGCCAAAGCAAA-----------------------------ACTACGATAAC------A---------------ACATCTA-ACTAGTA---------------------AA-------------------------CATCG--------GCAACAACCAGCG-----GCA-ACC---------A----------------------------AAAGTCTACA-ACAA-------TAACA-------TGGTGGCGGTCAC--TTGAA------------------------------AAACTAAC-T---------------AAAGTGCATTG--CAGA-TGCATT--C----GTA-AT
droBia1 scf7180000302428:4367044-4367278 - GGAAACCAAATGGCCCTGGCG---GTGGTTTGGAGCAG---------CAG---CCACAGCAGGTAATGAACTAATCACC-------------------------------ACAACAGA------------AACAACC-GAAACATCTTCGCCAAAGCAAA-----------------------------ACTACGATAACA-CCACA---------------ACATCTA-ACTAGTA---------------------AA-------------------------CATCA--------GCAACAACCATCG-----GCA-GCC---------ATAGCAA---------------------CAAGGTCTACG-ATAA-------TAACA-------CGGTGGCGGTC----TTAGA-------------------------------AACGAAC-T---------------A-AATGCATTA--CAGA-TGCGTT--C----ATA-AT
droTak1 scf7180000415254:490647-490892 + GGAAACCAAATGGCCCTGGCG---GTGGTTTGGAGCAG---------CAG---CCACAGCAGGTAATGAACTAATCAAC-------------------------------ACAACAGC------------AACAACT-GAAACATCTTCGCCAAAGCAAA-----------------------------ACTACGATAAC------A---------------ACATCTA-ATTAGTA---------------------AA-------------------------CATCA--------GCAACAGCCAGCG-----GCA-AACTAAACA---ACAACAA---------------------CAAGGTCTACA-ATAA-------TAACA-------TGGTGGCGGTCTC--TTGAAAA-CT-----AA------------------AGACTAAC-A---------------ACAATGCATTA--CAGA-TGCATT--C----ATA-CT
droEug1 scf7180000409466:4206049-4206289 - GGAAACCAAATGGCCCTGGCG---GTGGTTTGGAGCAG---------CAG---CCACAGCAGGTAATGAACTAATCACC-------------------------------ACAGCAGA------------AACAACT-GAAACTTCTTCGCCAAAGCAAA-----------------------------ACTACGATAAC------A---------------ACATCTA-AATAGTA---------------------AA-------------------------CATCA--------ACTACAACTAGCG-----GCA-ACT---------ATAACAA---------------------CAAAGTCTACA-ATAA-------TAACA-------TGGTGGAGGTCTC--TTTACAA-AT----GAA------------------AGACTTAC-T---------------AAAATGCATTA--CAGA-TGGATT--C----ATA-AA
dm3 chr3L:12115567-12115822 - GGAAACCAAATGGCCCTGGCG---GTGGTTCGGAGCAG---------CAG---CCAGAGAAGGTAATGAACTAATCACC-------------------AGCATCATCACAACAGCAGA------------AACAACT-GAAACATCTTCGCCGAAACAAA-----------------------------CCTACGATAAC------A---------------ACATCTAAATTAGTA---------------------AA-------------------------CATCA--------GCAACAGTCAGTC-----GCA-AGC---------ATAACAA---------------------CAAGGTCTACA-ATAA-------TAACA-------TGGTGAAGGCGTC--TTAAAAA-CT----AAA------------------CAACTAAC-T---------------AAAGTGCATTGTGTAGA-TGCATT--C----GTA-AA
droSim2 3l:11814111-11814366 - dsi_6527 GGAAACCAAATGGCCCTGGCG---GTGGTTCGGAGCAG---------CAG---CCACAGCAGGTAATGAACTAATCACC-------------------AGCACCACCACGACAGCAGA------------AACAACT-GAAACATCTTCGCCAAAACAAA-----------------------------ACTACGATAAC------A---------------ACATCTAAACTAGTA---------------------AA-------------------------CATCACA------GCAACAGTCAGCG-----GCA-AGC---------CTAACAA---------------------CAAGGTCTACA-ATAA-------TAACA-------TGGTGGAGGCGTC--TTGAAAA-CC----GAA------------------CAACTAAC-T---------------AAAGTGCATTG--CAGA-TGCATT--C----GTA-AA
droSec2 scaffold_0:4300326-4300581 - GGAAACCAAATGGCCCTGGCG---GTGGTTCGGAGCAG---------CAG---CCACAGCAGGTAATGAACTAATCACC-------------------AGCACCACCACGACAGCAGA------------AACAACT-GAAACATCTTCGCCAAAACAAA-----------------------------ACTACGATAAC------A---------------ACATCTAAACTAGTA---------------------AA-------------------------CATCACA------GCAACAGTCAGCG-----GCA-AGA---------CTAACAA---------------------CAAGGTCTACA-ATAA-------TAACA-------TGGTGGAGGCGTC--TTGAAAA-CT----GAA------------------CAACTAAC-T---------------AAAGTGCATAG--CAGA-TGCATT--C----GTA-AA
droYak3 3L:12163486-12163731 - dya_774 GGAAACCAAATGGCCCTGGCG---GTGGTTCAGAGCAG---------CAG---CCACAGCAGGTAATGAACTAATCACC-------------------ACC---------ACGACAGA------------AACAACT-GAAACATCTTCGCCAAAGCAAA-----------------------------ACTACGATAAC------A---------------ACATCTA-ACTAGTA---------------------AA-------------------------CATCA--------GCAACAGTCAGCG-----GCATACC---------ATAACAA---------------------CAAGGTCTACA-ATAA-------TAACA-------TGGTGGAGGCCTT--TTGAAAA-CT----GAA------------------AAACTAAC-T---------------AAAGTGCATTA--CAGA-TGCATT--C----ATACAT
droEre2 scaffold_4784:12105265-12105470 - GGAAACCAAATGGCCCTGGCG---GTGGTTCGGAGCAG---------CAG---CCACAGCAGGTAATGAACTAATCACC-------------------AGC---------ACGACAGA------------AACAACT-GAAACATCTTCGCCAAAGCAAA-----------------------------ACTACGATAAC------A---------------ACATCTA-ACTAGTA---------------------AA-------------------------CATCA--------GCAACAGTCAACG-----GCA-ACC---------ATAACAA---------------------CAAGGTCTA-----------------------------------------------------------------------------AACTAAC-----------------AAAGTGCATTA--CAGT-TGCATT--C----ATA-AA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
GTAAGCCCAATGGACCTGGCGGCGGTGGCATGGAACAA---------CAG---TCACAGCAGGTAATGAACTAAAAGCC-------------------AAAAGCA-----------------------------------------------------A-----------------------ACAAACACCAACGATAACAACCACAACATCATCAACAACAACAACTA--CTACTA------------------------------------------------CATCT--------TTAACAACAAGCAGTACTGCA-AAA---ACAACAATAATAA---------------------CAACATCAACA-ACAA-------CAGGGTGGCTTTCGGTGGCGGCAAC--TAC--------------------------------AAACTAAC-GAGA------------ATAATACATTA---AAC-TGTGCT--C----ATA-ATSizeHit CountTotal NormTotalM046
Female-body
V041
Embryo
V049
Head
V056
Head
M060
Embryo
V110
Male-body
...................................................................................................................................................................................................................................TA--CTACTA------------------------------------------------CATCT--------TTAACAACA........................................................................................................................................................................................................2211.001100000
............................................................................................................................................................................................................................................................................................................................................................................ATCAACA-ACAA-------CAGGGTGGCT..................................................................................................................2111.001100000
......................................................................................................................................................................................................................CAACAACAACAACTA--CTACTA------------------------------------------------CATCT--------TT...............................................................................................................................................................................................................2811.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................GGCAAC--TAC--------------------------------AAACTAAC-GAGA------------.....................................2111.001100000
...............................................................................................................................................................................................................................................................................................................................................................................AACA-ACAA-------CAGGGTGGCTTTCGGTG...........................................................................................................2511.001100000
....................................................................................................................................................................................................TAACAACCACAACATCATCAAC.................................................................................................................................................................................................................................................................................................2211.001100000
.....................................................TCACAGCAGGTAATGAACTAAAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
............GACCTGGCGGCGGTGGCATGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
..................................ACAA---------CAG---TCACAGCAGGTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATACATTA---AAC-TGTGCT--...........1911.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................TTCGGTGGCGGCAAC--TAC--------------------------------AAACT.........................................................2311.001100000
..................................ACAA---------CAG---TCACAGCAGGTAATGAACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------ATAATACATTA---AAC-TGTGCT--...........2111.001100000
.......................................................ACAGCAGGTAATGAACTAAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
..................................................................................................AAAAGCA-----------------------------------------------------A-----------------------ACAAACACCAAC.........................................................................................................................................................................................................................................................................................................................2011.001100000
........................................................CAGCAGGTAATGAACTAAAAGCC-------------------.........................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
..............................................................................................................................................................................................................................................................................................................................................AATAA---------------------CAACATCAACA-ACAA-------C...........................................................................................................................2180.131100000
droVir3
GTAAACCCAATGGACCTGGCGGCGGCGGCATGGAGCAG---------CAG---TCACAGCAGGTAATGAACTAAAAGCC-------------------AAA---------------CA------------AACAAACAAAA--A-----------------------AAGAAAAACAAACAAACATACACCGACGATAACAAGCACATCATCAAGAACAACAACATCTT--------------------------------------------------------TAACA--------ACAACAACTAGCAGCACTGCA-AGA---ACA---ACAAAAA---CAA---------------TAACTATAACA-ACAA-------GAACATGGCTTTCGGTGGCGGCAAC--TAC--------------------------------AAACTAAC-G---------------AAAATGCATTA--AA-T-TGTGCTCAT----ATA-ATSizeHit CountTotal NormTotalM027
Male-body
M028
Head
M047
Female-body
M061
Embryo
SRR060654
Ovary
SRR060655
Testis
SRR060656
Ovary
SRR060657
Testis
SRR060658
Ovary
SRR060659
Testis
SRR060660
Ovary
SRR060661
Embryo
SRR060662
Embryo
SRR060663
Embryo
SRR060664
Male-body
SRR060665
Female-body
SRR060666
Male-body
SRR060667
Female-body
SRR060668
Male-body
SRR060669
Female-body
SRR060670
Testis
SRR060671
Male-body
SRR060672
Female-body
SRR060673
Ovary
SRR060674
Ovary
SRR060675
Ovary
SRR060676
Ovary
SRR060677
Ovary
SRR060678
Testis
SRR060679
Testis
SRR060680
Testis
SRR060681
Testis
SRR060682
Embryo
SRR060683
Testis
SRR060684
Embryo
SRR060685
Embryo
SRR060686
Embryo
SRR060687
Embryo
SRR060688
Ovary
SRR060689
Testis
SRR1106712
embryo_0-2h
SRR1106713
embryo_0-2h
SRR1106714
embryo_2-4h
SRR1106715
embryo_4-6h
SRR1106716
embryo_4-6h
SRR1106717
embryo_6-8h
SRR1106718
embryo_6-8h
SRR1106719
embryo_8-10h
SRR1106720
embryo_8-10h
SRR1106721
embryo_10-12h
SRR1106722
embryo_10-12h
SRR1106723
embryo_12-14h
SRR1106724
embryo_12-14h
SRR1106725
embryo_14-16h
SRR1106726
embryo_14-16h
SRR1106727
larvae
SRR1106728
larvae
SRR1106729
mixed whole adult body
SRR1106730
embryo_16-30h
V047
Embryo
V053
Head
V116
Male-body
GSM1528803
follicle cells
................TGGCGGCGGCGGCATGGAGCAG---------CA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002001000000000000000000000000000000000000000000000000000000000010
.............................ATGGAGCAG---------CAG---TCACAGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002000000000000000000000000010000000000000000000000000000000000010
...AACCCAATGGACCTGGCGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002001000000001000000000000000000000000000000000000000000000000000
.............ACCTGGCGGCGGCGGCATGGAGCAG---------CA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000010
..........TGGACCTGGCGGCGGCGGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000010000000000000000000000000000000000000000
................TGGCGGCGGCGGCATGGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
...........GGACCTGGCGGCGGCGGCATGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000010000000000000000000000000000000000000000000000000000
....ACCCAATGGACCTGGCGGCGGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................CTATAACA-ACAA-------GAACATGGCTTT................................................................................................................2411.001000000000000000000000000001000000000000000000000000000000000000
............................................................................................................................................................................................ACCGACGATAACAAGCACATC..........................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000001000000000000000000000
..................................................................................................................................................................................................GATAACAAGCACATCATCAAGA...................................................................................................................................................................................................................................................................................................2211.001000000000000001000000000000000000000000000000000000000000000000
...................................................................................................................................................................................CAAACATACACCGACGATAACAAGCACAT...........................................................................................................................................................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................GAAAAACAAACAAACATACACCGACG........................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................CA-ACAA-------GAACATGGCTTTCGGTGGCGG.......................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................CTT--------------------------------------------------------TAACA--------ACAACAACTAGC.....................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
................................................................AATGAACTAAAAGCC-------------------AAA---------------CA------------AAC......................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................CAACATCTT--------------------------------------------------------TAACA--------ACAACAA..........................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................CGACGATAACAAGCACATC..........................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000001000
......................................................................................................................................................................................................................................................................................................................AGCACTGCA-AGA---ACA---ACAAAAA---C....................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................CATCTT--------------------------------------------------------TAACA--------ACAACAACTAGC.....................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................AACTAGCAGCACTGCA-AGA---ACA---...............................................................................................................................................................................2211.001000000000000000000100000000000000000000000000000000000000000000
.......................................................ACAGCAGGTAATGAACTAAAAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................ATCTT--------------------------------------------------------TAACA--------ACAACAACTA.......................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
.........ATGGACCTGGCGGCGGCGGCATGGAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................AA-------GAACATGGCTTTCGGT............................................................................................................1811.001000100000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................CATGGCTTTCGGTGGCGGC......................................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
..........................GGCATGGAGCAG---------CAG---TCACAGCAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................CTGCA-AGA---ACA---ACAAAAA---CA...................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..........TGGACCTGGCGGCGGCGGCATGGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000001000
...................................................................................................................................................................................................ATAACAAGCACATCATCAAG....................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................CATGGCTTTCGGTGGCGGCAAC--TA...............................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
........AATGGACCTGGCGGCGGCGGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
...............CTGGCGGCGGCGGCATGGAGCAG---------CAG---T.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................CACATCATCAAGAACAACA.............................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................ACAAACATACACCGACGATA.....................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000001000000000000000000000000000
................................GAGCAG---------CAG---TCACAGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1820.501000000100000000000000000000000000000000000000000000000000000000
..............................TGGAGCAG---------CAG---TCACAGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.501001000000000000000000000000000000000000000000000000000000000000
.................................................................ATGAACTAAAAGCC-------------------AAA---------------C......................................................................................................................................................................................................................................................................................................................................................................................................1870.141010000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................AACA--------ACAACAACTAGCAGG..................................................................................................................................................................................................19170.061000000000001000000000000000000000000000000000000000000000000000
droGri2
GTAAGCCCAATGGACCTGGAG---GTGGCATGGAGCAG---------CAG---CCACAGCAGGTAATCAACTAGAAGCCAAACCAAAAACAAATCACCAACCCGTT-----------------------------------------------------A-----------------------------ACAACAAAAAC------A---------------ACAACCA-----ATA--------------------CAT-------------------------CATCA--------ACAACAACTAGCAGCCCTGCA-ACA---------------------------------------ACAACAATA-ATAA-------CAACTTGGCTTTCGGTGGCGGCAAA------CAA-CA----CAA------------------AAACTAAC-GA-A------------AAAACGCATTGAAGAGTATGCTCC--CCACAATA-ATSizeHit CountTotal NormTotalM041
Female-body
V109
Male-body
...............................................................................................................................................................................................................................................................................................................................................................................................CAACTTGGCTTTCGGTGGCGGCAAA------CA...........................................................................................2711.00110
.........ATGGACCTGGAG---GTGGCATGGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101
droWil2
GGAAACCAAATGGCCCTGGTG---GTGGTTTGGAGCAG---------CAG---CCACAGCAGGTAATCAACTAAAAACC-------------------AAAACCAGCCATCAAGCTAC------------AACAACA-ACAACAATTTAACAACAAC--A-----------------------------ACCACGATAGC------A---------------ACAA-TA--------------------------ACC--ACTA-TCAGCATATAGAGAAGTGCA-----GCGCG---GTAAAAG-CAGCG-----GCA-------------GTAACAA---------------------CAACATCTACA-ACAACAAACATCAACA-------TGGTGGCGGCAAC--ACTAA------------------------------CAACAA--------------------ATATAAA-----------------------CTA-AASizeHit CountTotal NormTotalM020
Head
M045
Female-body
V117
Male-body
V118
Embryo
V119
Head
.......................................................................................................................................................................................................................................................................A-TCAGCATATAGAGAAGT.................................................................................................................................................................................................................................1812.00200020
................TGGTG---GTGGTTTGGAGCAG---------CAG---CC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200011
........................................................................................................................................................................................................................................................................................GTGCA-----GCGCG---GTAAAAG-CAGCG-----GCA-------------...............................................................................................................................................................................2512.00200110
...................................................................................................................................................................................................................................................................................GAGAAGTGCA-----GCGCG---GTAAAAG-CAGC.....................................................................................................................................................................................................2611.00100010
................................................................................................................................................................................................................................................................CC--ACTA-TCAGCATATAGAGAAGTGCA-----.........................................................................................................................................................................................................................2611.00100010
..............................................................................................................................................CAATTTAACAACAAC--A-----------------------------ACCACGAT......................................................................................................................................................................................................................................................................................................................2411.00100010
...........................GTTTGGAGCAG---------CAG---CCACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
.........................................................................................................................................................................................................................................................................................TGCA-----GCGCG---GTAAAAG-CAGCG-----GCA-------------...............................................................................................................................................................................2411.00100100
............................................................................................................................................................................................................................................................................................................AAAAG-CAGCG-----GCA-------------GTAACAA---------------------CAAC...............................................................................................................................................2411.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................CAACA-------TGGTGGCGGCAAC--ACTAA------------------------------CAAC..........................................................2711.00100010
.............................................................................................................................................................................................................................................................................................................................................................................TCTACA-ACAACAAACATCAACA-------TGGTGG..........................................................................................................2811.00101000
...............................................................................................................................................................................................................................................................................................................................................................................................CAACA-------TGGTGGCGGCAAC--AC...............................................................................................2011.00100010
...............................................................................................................................................................................................................................................................ACC--ACTA-TCAGCATATAGAGAAG..................................................................................................................................................................................................................................2311.00101000
....................................................................................................................................................................................................................................................................ACTA-TCAGCATATAGAGAAG..................................................................................................................................................................................................................................2011.00100010
..........TGGCCCTGGTG---GTGGTTTGGAGCAG---------CA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100
..............................................................................................................................................................................................................................................................................ATATAGAGAAGTGCA-----GCGCG---GT...............................................................................................................................................................................................................2211.00100010
............................................................................................................................................................................................................................................................................................A-----GCGCG---GTAAAAG-CAGCG-----GC.............................................................................................................................................................................................2011.00100010
..................................................................................................................................................TTAACAACAAC--A-----------------------------ACCACGATA.....................................................................................................................................................................................................................................................................................................................2111.00100010
..........................................................................................................................................................................................................................................................................CAGCATATAGAGAAGTGC...............................................................................................................................................................................................................................1811.00100010
.............................TTGGAGCAG---------CAG---CCACAGCAGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
.......................................................................................................................................................................................................................................................................................AGTGCA-----GCGCG---GTAAAAG-CAGCG-----GC.............................................................................................................................................................................................2511.00100010
...............CTGGTG---GTGGTTTGGAGCAG---------CAG---C.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
............................................................................................................................................................................................................................................................................................................AAAAG-CAGCG-----GCA-------------GTAACAA---------------------C..................................................................................................................................................2111.00100010
......................................................................................................................................................................................................................................................................................AAGTGCA-----GCGCG---GTAAAAG-CAGC.....................................................................................................................................................................................................2311.00100010
.................GGTG---GTGGTTTGGAGCAG---------CAG---......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
.......................................................................................................................................................................................................................................................................A-TCAGCATATAGAGAAGTG................................................................................................................................................................................................................................1911.00100010
...........................GTTTGGAGCAG---------CAG---CCACAGCAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
............................................................................................................................................................................................................................................................................................................................................................................................CATCAACA-------TGGTGGCGGCAAC--ACT..............................................................................................2411.00100010
.......................................................................................................................................................................................................................................................................A-TCAGCATATAGAGAAGTGC...............................................................................................................................................................................................................................2011.00100010
........................................................................................................................................................ACAAC--A-----------------------------ACCACGATAGC------A---------------ACAA-T.......................................................................................................................................................................................................................................................................................2311.00100010
..............................................................................................................................................CAATTTAACAACAAC--A-----------------------------ACCACGATAGC------A---------------.............................................................................................................................................................................................................................................................................................2811.00100010
.......................................................................................................................................................................................................................................................................A-TCAGCATATAGAGAAGTGCA-----.........................................................................................................................................................................................................................2111.00100010
................TGGTG---GTGGTTTGGAGCAG---------CA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
..........................................................................................................................................................................................................................................................................................GCA-----GCGCG---GTAAAAG-CAGCG-----GCA-------------...............................................................................................................................................................................2311.00100100
......................................................................................................................................................................................................................................................................................................G---GTAAAAG-CAGCG-----GCA-------------GTAACAA---------------------CAAC...............................................................................................................................................2711.00100010
...............................................................................................................................................................................................................................CAA-TA--------------------------ACC--ACTA-TCAGCA............................................................................................................................................................................................................................................1811.00100010
..........................................................................................................................................................................................................................................................................................GCA-----GCGCG---GTAAAAG-CAGC.....................................................................................................................................................................................................1911.00100010
............................................................................................................................................................................................................................................................................................................AAAAG-CAGCG-----GCA-------------GTAACAA---------------------...................................................................................................................................................2011.00100010
.........................................................................................................................................................................................................................................................................................................................................................................................AAACATCAACA-------TGGTGGCGGC......................................................................................................2111.00100010
.....................................................................ACTAAAAACC-------------------AAAACCAGCCATC............................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
......................................................................................................................................................................................................................................................................................................G---GTAAAAG-CAGCG-----GCA-------------GT.............................................................................................................................................................................1811.00100010
...............CTGGTG---GTGGTTTGGAGCAG---------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100
........................................................................................................................................................................................................................................................................................GTGCA-----GCGCG---GTAAAAG-CAGCG-----GC.............................................................................................................................................................................................2411.00100010
...............................................................................................................................................................A-----------------------------ACCACGATAGC------A---------------ACAA-T.......................................................................................................................................................................................................................................................................................1811.00100010
................................................................................................................................................................................................................................................................................ATAGAGAAGTGCA-----GCGCG---G................................................................................................................................................................................................................1911.00100100
..................GTG---GTGGTTTGGAGCAG---------CAG---C.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
........................GTGGTTTGGAGCAG---------CAG---CC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
.........................TGGTTTGGAGCAG---------CAG---CC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
............................................................................................................................................................................................................................................................................................................AAAAG-CAGCG-----GCA-------------GTAACAA---------------------CAACA..............................................................................................................................................2511.00100100
.............................TTGGAGCAG---------CAG---CCACAGCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.50100010
..............................................................................................................CAAGCTAC------------AACAACA-ACAACA...........................................................................................................................................................................................................................................................................................................................................................................2130.33100010
dp5
GGAAGCCGAATGGTCCTGGCG---GTGGTCTGGAGCAGCAGCAGCAGCAG---CCACAGCAGGTAATGAACTAATCACC-------------------------------A---CTGA------------CACAAATAGAA--AACATCGCCAAAGCAA----------------------------------------------------------------CATCCA-ACC-G--TAACAACAAAAAAGAACAACC--ACTAATCA------------------------------GCA--TGGCGGCG-----GCA-ACA---------ACAACAG---------------------CAAGAAATA--------------CTACT-------TGGTGTCGGCAAC--ATAGAAA-TA----GAAACACTCCCACTCCACACACAACTAAC-T---------------AAAAT--------------GCATT--C----ATA-ATSizeHit CountTotal NormTotalM022
Male-body
M040
Female-body
M059
Embryo
M062
Head
V043
Embryo
V051
Head
V112
Male-body
SRR902010
Ovary
SRR902011
Testis
SRR902012
CNS imaginal disc
...............................................................................................................................................................................................................................................................................................................................................................................................CTACT-------TGGTGTCGGCAAC--ATA..............................................................................................2112.0020200000000
......CGAATGGTCCTGGCG---GTGGTCTGGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010000000
...................................................................GAACTAATCACC-------------------------------A---CTGA------------CACA.....................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
.....................................GCAGCAGCAGCAG---CCACAGCAGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.............................................................................................................................................................................................................................................................................................................................................CAACAG---------------------CAAGAAATA--------------CTACT-------TGGT............................................................................................................2411.0010010000000
.GAAGCCGAATGGTCCTGGCG---GTGGTC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010001000000
.......................................................................................................................................................................................................................................................................AATCA------------------------------GCA--TGGCGGCG-----GCA-AC.........................................................................................................................................................................................2111.0010010000000
.................................................................................................................................................................................................................................................AACAAAAAAGAACAACC--ACTA...................................................................................................................................................................................................................................................2111.0010010000000
.............................................................................................................................................................................................................................................................................................................................................................................AATA--------------CTACT-------TGGTGTCGG.......................................................................................................1811.0010100000000
....GCCGAATGGTCCTGGCG---GTGGTCTGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010001000000
........AATGGTCCTGGCG---GTGGTCTGGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010000000
................TGGCG---GTGGTCTGGAGCAGCAGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010000000
............................................................................................................................................................CAA----------------------------------------------------------------CATCCA-ACC-G--TAACAACAAAAAAG................................................................................................................................................................................................................................................................2711.0010010000000
..........................................................................................................................................................................................................................................................................................................................................................................AGAAATA--------------CTACT-------TGGTGTC.........................................................................................................1911.0010100000000
.....................................................................................................................................................................................................................................................................CTAATCA------------------------------GCA--TGGCGGCG-----GCA-...........................................................................................................................................................................................2111.0010100000000
..........................................................................................................................................GAA--AACATCGCCAAAGCAA----------------------------------------------------------------CATCCA-AC...................................................................................................................................................................................................................................................................................2711.0010010000000
.......GAATGGTCCTGGCG---GTGGTCTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000001000
.........................................................................ATCACC-------------------------------A---CTGA------------CACAAATAGAA--............................................................................................................................................................................................................................................................................................................................................................................2211.0010010000000
..................GCG---GTGGTCTGGAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1611.0010000000100
...........................GTCTGGAGCAGCAGCAGCAGCAG---CCAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010000000
.................GGCG---GTGGTCTGGAGCAGCAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000001000
........................................................................................................................................................................................................................................................................ATCA------------------------------GCA--TGGCGGCG-----GCA-A..........................................................................................................................................................................................1911.0010010000000
......................................................................................................................................................................................................................................................................TAATCA------------------------------GCA--TGGCGGCG-----GCA-...........................................................................................................................................................................................2011.0010100000000
..........TGGTCCTGGCG---GTGGTCTGGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000001000
.............................................................................................................................................................................................................................................................................................................................................................................AATA--------------CTACT-------TGGTGTCGGCAAC--.................................................................................................2211.0010100000000
...................CG---GTGGTCTGGAGCAGCAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
droPer2
GGAAGCCGAATGGTCCTGGCG---GTGGTCTGGAGCAGCAGCAGCAGCAG---CCACAGCAGGTAATGAACTAATCACC-------------------------------A---CTGA------------CACAAATAGAA--AACATCGCCAAAGCAA----------------------------------------------------------------CATCCA-ACC-G--TAACAACAAAAAAGAACAACC--ACTAATCA------------------------------GCA-----TGGCG-----GCA-GCA------------ACAA---------------------CAACAGCAACA-AATA-------CTACT-------TGGTGTCGGCAAC--ATAGAAA-TA----GAAACACTCCCACTCCACACACAACTAAC-T---------------AAAAT--------------GCATT--C----ATA-ATSizeHit CountTotal NormTotalM021
Embryo
M042
Female-body
V042
Embryo
V050
Head
V057
Head
V111
Male-body
....................................................................................................................................................................................................................................................................................................................................................................................AATA-------CTACT-------TGGTGTCGGC......................................................................................................1914.004400000
...........GGTCCTGGCG---GTGGTCTGGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.003300000
..............................................................GTAATGAACTAATCACC-------------------------------A---CT.......................................................................................................................................................................................................................................................................................................................................................................................................2013.003300000
..................................................................................................................................................................................................................................................................................................................................................................................................CT-------TGGTGTCGGCAAC--ATAGAAA-T........................................................................................2313.003300000
.....................................................................................................................................................................................................................................................................................................................................................................................ATA-------CTACT-------TGGTGTCGGC......................................................................................................1813.003300000
....................................................................................................................................................................................................................................................................................................................................................................................AATA-------CTACT-------TGGTGTCGGCAAC--.................................................................................................2213.003300000
.........................................................................................................................................................................................................................................................................................................................................................................AACAGCAACA-AATA-------CTACT-------TGGTGTCGGC......................................................................................................2913.003300000
.................................................................................................................................................................................................................................................................................................................................................................................CA-AATA-------CTACT-------TGGTGTCGGC......................................................................................................2112.002200000
...............................................................................................................................................................................................................................................................................................................................................................................................CTACT-------TGGTGTCGGCAAC--ATAGAA...........................................................................................2412.002200000
......................................................................................................................................................................................................................................................................................................................................................................................TA-------CTACT-------TGGTGTCGGCA.....................................................................................................1812.002200000
.............................................................................................................................................................................................................................................................CAACC--ACTAATCA------------------------------GCA-----TGGCG-----GCA-GC.........................................................................................................................................................................................2611.001001000
................................................................................................................................................................................................................................................CAACAAAAAAGAACAACC--ACT....................................................................................................................................................................................................................................................2111.001100000
...............................................................................................................................................................................................................................................................................................................................................................................AACA-AATA-------CTACT-------TGGTGTCGGC......................................................................................................2311.001100000
.................................................................................................................................................................................................................................................................C--ACTAATCA------------------------------GCA-----TGGCG-----GCA-G..........................................................................................................................................................................................2111.001100000
....................................................................................................................................................................................................................................................................................................................................................................................AATA-------CTACT-------TGGTGTCGGCAAC--ATAGAG...........................................................................................2811.001100000
.........................................................................................................................................................................................................................................................AGAACAACC--ACTAATCA------------------------------GCA-----T........................................................................................................................................................................................................2111.001001000
........................................................................................................................................TAGAA--AACATCGCCAAAGC..............................................................................................................................................................................................................................................................................................................................................................1911.001100000
................................................................................................................................................................................................................................................................................................................................................................................ACA-AATA-------CTACT-------TGGTGTCGGC......................................................................................................2211.001100000
..............................................................................................................................................................................................................................................................................................................................................................................CAACA-AATA-------CTACT-------TGGTGTCGGCAAC--.................................................................................................2711.001010000
........................GTGGTCTGGAGCAGCAGCAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................A-------CTACT-------TGGTGTCGGCAAC--AT...............................................................................................2111.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................ATA-------CTACT-------TGGTGTCGGCAAC--ATAGA............................................................................................2611.001100000
..........................................................................................................................................................................................................................................................................................................................................................................ACAGCAACA-AATA-------CTACT-------TGGTGTCGGC......................................................................................................2811.001100000
.......GAATGGTCCTGGCG---GTGGTCTGGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
..............................................................................C-------------------------------A---CTGA------------CACAAATAGAA--AACATCGCC...................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.......GAATGGTCCTGGCG---GTGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
..................................................................................................................................................................................................................................................................................................................................................................................A-AATA-------CTACT-------TGGTGTCGGCAAC--ATAGAA...........................................................................................2911.001100000
..........................................................................................................................................................AGCAA----------------------------------------------------------------CATCCA-ACC-G--TAACAACA......................................................................................................................................................................................................................................................................2311.001010000
droAna3
GCAATGCCAATGTCAGTGGTG---CCG-CCGGCAGCAA---------CAGCGGCTCTAACAG------TACCAGCAACA-------------------------------GCAACAGT------------AACACCA-GCAATAATAATACCAACAT------------------------------------------------------TAACAACAACAACAACAA--CAACAA------------------------------------------------CAATA--------ACAACAA-CAGCA-----GCA-ACA---ACA---ACAACAG---CAGCAGCAACAACAGCAACAGCGGCGAAA-ATA------------A-------TGGTGGAAGCAAC--AGCAG---CA----------------------------GCAAC-A-----------------ACAG--------------------C----AAC-ACSizeHit CountTotal NormTotalM044
Female-body
M058
Embryo
V039
Embryo
V055
Head
V105
Male-body
V106
Head
.................................................................................................................................................................................................................................................................................................................................................................ACAGCAACAGCGGCGAAA-ATA------------A-------TGGT............................................................................................................2611.001010000
....................................................................................................................................................................................................................................................................................................................GCA-----GCA-ACA---ACA---ACAACAG---.....................................................................................................................................................................19200.102000002
............................................................................................................................................................................................................................................................................................................AACAA-CAGCA-----GCA-ACA---ACA---ACAAC..........................................................................................................................................................................24120.081001000
.............................................................................................................................................................................................................................................................................................................ACAA-CAGCA-----GCA-ACA---ACA---ACAAC..........................................................................................................................................................................23150.071100000
.................................................................................................................................................................................................................................................................................................A--------ACAACAA-CAGCA-----GCA-ACA---AC...................................................................................................................................................................................21180.061100000
.................................................................................................................................................................................................................................................................................................................................................AG---CAGCAGCAACAACAGCAACAGC...............................................................................................................................................24200.051010000
.........................................................................................................................................................................................................................CAACAACAACAA--CAACAA------------------------------------------------CAATA--------.................................................................................................................................................................................................................23200.051010000
.....................................................................................................................................................................................................................................................................................................................CA-----GCA-ACA---ACA---ACAACAG---CAGC.................................................................................................................................................................22200.051010000
......................................................................................................................................................................................................................................................................................................................A-----GCA-ACA---ACA---ACAACAG---CAGC.................................................................................................................................................................21200.051000001
................................................................................................................................................................................................................................................................................................................................ACA---ACA---ACAACAG---CAGCAGC..............................................................................................................................................................20200.051010000
droBip1
GGAAACCAAATGGCCCTG------GTGGTTTGGAACAG---------CAG---CCACAGCAGGTAATGAATTAATCAC----------------------------------ACCAGAAACTACAAAAGAA---ACT----ACATCTTCGCCAAAGCAAA-----------------------------ACTACGATAA------------------------CATCTG-ATTAGTTTAACAAGAAAAAAAAACATGC--ACTATTCA----------------------GAGCGAAAGC----ATTATCT-----GCA-TTA---------ATAATAA---------------------CAACGTCTACG-ATAG-------GAGCA----TCTTGGTGGCGGCCAA--T-AAAAA-C------AA------------------AAACTAACCC---------------AAAATGCGTTCAAAAGA-TGCATT--C----ACG-ATSizeHit CountTotal NormTotal
No Reads
droKik1
GGAAACCGAATGGCCCTGGCG---GTGGTTTGGAGCAG---------CAGCCGCCACAGCAGGTAATGAACTAATCAC--------------------------------ACGACAGAA-C---------AACAACTTGAAACATCTTTGCCAAAGCAAAAAAAAAAAAGAACATGAAAT---------ACTACGATAACA----CA---------------GCATCT--------------------------------------------------------------------------------GCG-----GCA-ACT-TAACAACCACAACAACAGCAA---------------CAGTATCTACAAATAA-------CAACCT------GGGTGTCGGTCACACTTGAA-A-TTATAAGAA------------------------------AATAACAACTTAAAAAATGC------------------------ATA-ATSizeHit CountTotal NormTotal
No Reads
droFic1
GGAAACCAAATGGCCCTGGCG---GTGGTTTGGAGCAG---------CAG---CCACAGCAGGTAATGAACTAATCACC-------------------------------ACAACCGA------------AACAACT-GAAACATCTTCGCCAAAGTAAA-----------------------------ACTACGATAAC------A---------------ACATCTG-ACTAGTA---------------------AA-------------------------CATCG--------GCAACAGCCAGTG-----GCA-GCC---------ATAACAA---------------------CAAGGTCTAC-----------------A------TGGGTGGTGGCCAC--TTAAAAAAAC----GAA------------------AAACTAAC-T---------------AAAGTGCACTG--AAGG-TGCATT--C----ATA-AASizeHit CountTotal NormTotal
No Reads
droEle1
GGAAACCGAATGGCCCTGGCG---GTGGTTTGGAGCAG---------CAG---CCACAGCAGGTAATGAACTAATCACC-------------------------------AGAACAAA------------AACAGTT-GAAACATCTTCGCCAAAGCAAA-----------------------------ACTACGATAA------------------------CATCTA-ACTAGTA---------------------AA-------------------------CATCG--------GCAACAACCGGCG-----GCA-ACC---------ATAACAA---------------------CAA---------------------------------GGTGGCGGTCAC--TTGAA------------------------------AAACTAAC-T---------------AAAATGCATTG--CAGA-TGTATT--C----ATA-ATSizeHit CountTotal NormTotal
No Reads
droRho1
GGAAACCGAATGGTCCCGGCG---GTGGTTTGGAGCAG---------CAG---CCACAGCAGGTAATGAACTAATCACC-------------------------------AGAACAAA------------AACAACT-GAAACATCTTCGCCAAAGCAAA-----------------------------ACTACGATAAC------A---------------ACATCTA-ACTAGTA---------------------AA-------------------------CATCG--------GCAACAACCAGCG-----GCA-ACC---------A----------------------------AAAGTCTACA-ACAA-------TAACA-------TGGTGGCGGTCAC--TTGAA------------------------------AAACTAAC-T---------------AAAGTGCATTG--CAGA-TGCATT--C----GTA-ATSizeHit CountTotal NormTotal
No Reads
droBia1
GGAAACCAAATGGCCCTGGCG---GTGGTTTGGAGCAG---------CAG---CCACAGCAGGTAATGAACTAATCACC-------------------------------ACAACAGA------------AACAACC-GAAACATCTTCGCCAAAGCAAA-----------------------------ACTACGATAACA-CCACA---------------ACATCTA-ACTAGTA---------------------AA-------------------------CATCA--------GCAACAACCATCG-----GCA-GCC---------ATAGCAA---------------------CAAGGTCTACG-ATAA-------TAACA-------CGGTGGCGGTC----TTAGA-------------------------------AACGAAC-T---------------A-AATGCATTA--CAGA-TGCGTT--C----ATA-ATSizeHit CountTotal NormTotal
No Reads
droTak1
GGAAACCAAATGGCCCTGGCG---GTGGTTTGGAGCAG---------CAG---CCACAGCAGGTAATGAACTAATCAAC-------------------------------ACAACAGC------------AACAACT-GAAACATCTTCGCCAAAGCAAA-----------------------------ACTACGATAAC------A---------------ACATCTA-ATTAGTA---------------------AA-------------------------CATCA--------GCAACAGCCAGCG-----GCA-AACTAAACA---ACAACAA---------------------CAAGGTCTACA-ATAA-------TAACA-------TGGTGGCGGTCTC--TTGAAAA-CT-----AA------------------AGACTAAC-A---------------ACAATGCATTA--CAGA-TGCATT--C----ATA-CTSizeHit CountTotal NormTotal
No Reads
droEug1
GGAAACCAAATGGCCCTGGCG---GTGGTTTGGAGCAG---------CAG---CCACAGCAGGTAATGAACTAATCACC-------------------------------ACAGCAGA------------AACAACT-GAAACTTCTTCGCCAAAGCAAA-----------------------------ACTACGATAAC------A---------------ACATCTA-AATAGTA---------------------AA-------------------------CATCA--------ACTACAACTAGCG-----GCA-ACT---------ATAACAA---------------------CAAAGTCTACA-ATAA-------TAACA-------TGGTGGAGGTCTC--TTTACAA-AT----GAA------------------AGACTTAC-T---------------AAAATGCATTA--CAGA-TGGATT--C----ATA-AASizeHit CountTotal NormTotal
No Reads
dm3
GGAAACCAAATGGCCCTGGCG---GTGGTTCGGAGCAG---------CAG---CCAGAGAAGGTAATGAACTAATCACC-------------------AGCATCATCACAACAGCAGA------------AACAACT-GAAACATCTTCGCCGAAACAAA-----------------------------CCTACGATAAC------A---------------ACATCTAAATTAGTA---------------------AA-------------------------CATCA--------GCAACAGTCAGTC-----GCA-AGC---------ATAACAA---------------------CAAGGTCTACA-ATAA-------TAACA-------TGGTGAAGGCGTC--TTAAAAA-CT----AAA------------------CAACTAAC-T---------------AAAGTGCATTGTGTAGA-TGCATT--C----GTA-AASizeHit CountTotal NormTotalGSM154618
Ovary
GSM154620
Ovary
GSM154621
Ovary
GSM154622
Ovary
GSM180328
Head
GSM180329
Mixed-body
GSM180330
Embryo
GSM180331
Embryo
GSM180332
Embryo
GSM180333
Embryo
GSM180334
Larvae
GSM180335
Disc
GSM180336
Pupae
GSM180337
S2
GSM231091
Ovary
GSM239041
Head
GSM239050
Head
GSM239051
S2
GSM239052
S2
GSM246084
Head
GSM266765
S2
GSM280082
Ovary
GSM280083
Ovary
GSM280084
Ovary
GSM280085
Testis
GSM280086
Ovary
GSM280087
S2-NP
GSM280088
S2-NP
GSM312995
Head
GSM313160
Head
GSM313161
Head
GSM313162
Head
GSM313163
Head
GSM313164
Head
GSM313165
Head
GSM343287
Embryo
GSM379050
Ovary
GSM379051
Ovary
GSM379052
Ovary
GSM379053
Ovary
GSM379054
Ovary
GSM379055
Ovary
GSM379056
Ovary
GSM379057
Ovary
GSM379058
Ovary
GSM379059
Ovary
GSM379060
Ovary
GSM379061
Ovary
GSM379062
Ovary
GSM379063
Ovary
GSM379064
Ovary
GSM379065
Ovary
GSM379066
Ovary
GSM379067
Ovary
GSM424739
S2
GSM424740
S2
GSM424741
S2
GSM467729
Female-body
GSM467730
Female-body
GSM467731
Female-body
M002
CS
M003
Male-body
M004
Male-body
M005
ML-DmD32
M006
ML-DmD32
M029
OSC
M030
OSC
M031
OSC
M032
S2-R+
M033
S2-R+
M034
S2-R+
M035
S2-R+
M036
S2-R+
M037
S2-R+
M038
S2-R+
M039
S2-R+
M048
S2-R+
OSS2
OSS
OSS6
OSS
OSS7
OSS
OSS8
OSS
S1
Head
S10
Embryo
S11
Embryo
S12
Embryo
S13
Embryo
S14
Embryo
S15
S2-GMR
S16
Kc
S17
Larvae
S18
Larvae
S19
Pupae
S2
Head
S20
Pupae
S21
Disc
S22
Head
S23
Female-body
S24
Male-body
S25
Larvae
S26
Larvae
S27
Pupae
S28
Pupae
S29
Head
S3
Male-body
S30
S2-GMR
S31
S2
S32
S2
S33
Kc
S34
Kc
S35
Kc
S4
Female-body
S5
Disc
S6
Embryo
S7
Embryo
S8
S2
S9
Embryo
SRR001337
Head
SRR001338
Head
SRR001339
Head
SRR001340
Head
SRR001341
Head
SRR001342
Head
SRR001343
Head
SRR001344
Head
SRR001345
Head
SRR001346
Head
SRR001347
Head
SRR001348
Head
SRR001349
Head
SRR001664
Head
SRR010951
Ovary
SRR010952
Ovary
SRR010953
Ovary
SRR010954
Ovary
SRR010955
Ovary
SRR010956
Ovary
SRR010957
Ovary
SRR010958
Ovary
SRR010959
Ovary
SRR010960
Ovary
SRR014268
Embryo
SRR014269
Embryo
SRR014270
Embryo
SRR014271
Embryo
SRR014272
Embryo
SRR014273
Ovary
SRR014274
Ovary
SRR014275
Ovary
SRR014276
Ovary
SRR014277
Ovary
SRR014278
Ovary
SRR014279
Ovary
SRR014280
Ovary
SRR014281
Ovary
SRR014282
Ovary
SRR023197
S2
SRR023399
S2
SRR023400
S2
SRR023402
S2
SRR023407
S2
SRR029028
S2
SRR029029
S2
SRR029030
S2
SRR029031
S2
SRR029032
S2
SRR029033
S2
SRR029608
Head
SRR029633
Head
SRR030145
gb3
SRR031692
Head
SRR031693
Head
SRR031694
Head
SRR031696
Head
SRR031697
Head
SRR031698
Head
SRR031699
Head
SRR031700
Head
SRR031701
Head
SRR031702
Head
SRR031703
Head
SRR031704
Head
SRR032092
S2
SRR032093
S2
SRR032094
S2
SRR032095
S2-NP
SRR032096
S2-NP
SRR032152
Head
SRR060643
Testis
SRR060644
Ovary
SRR060645
Testis
SRR060646
Ovary
SRR060647
Ovary
SRR060648
Ovary
SRR060649
Ovary
SRR060650
Testis
SRR060651
Ovary
SRR060652
Testis
SRR060653
Ovary
SRR065151
Ovary
SRR065152
Ovary
SRR065153
Ovary
SRR065154
Ovary
SRR065155
Ovary
SRR065800
Ovary
SRR065801
Ovary
SRR065802
Ovary
SRR065803
Ovary
SRR065804
Ovary
SRR065805
Ovary
SRR065806
Ovary
SRR065807
Ovary
SRR097865
S2-NP
SRR097866
S2-NP
SRR097867
S2-NP
SRR298536
Ovary
SRR298537
Ovary
SRR298711
Ovary
SRR298712
Ovary
SRR317110
Ovary
SRR317111
Ovary
SRR317112
Ovary
SRR317113
Ovary
SRR317114
Ovary
SRR317115
Ovary
SRR317116
Ovary
SRR317117
Ovary
SRR341115
S2
SRR341116
S2
SRR341117
S2
SRR341118
S2
SRR351332
Mixed-body
SRR351333
Mixed-body
T004
OSC
T005
CME-L1
V001
Embryo
V002
Embryo
V003
S2
V006
Female-body
V007
Head
V008
S2
V009
CME-L1
V010
ML-DmD20-C5
V011
Sg4
V012
Male-body
V013
Head
V014
DTT
V015
DreRFHV
V018
Kc167
V019
GM2
V020
S2-R+
V021
ML-DmD21
V022
ML-DmD32
V023
Head
V024
Kc167
V025
S2-R+
V026
1182-2H
V027
ML-DmD21
V028
CME-W1-Cl.8+
V029
ML-DmD9
V030
ML-DmD8
V031
GM2
V032
S1
V033
CME-W1-Cl.8+
V034
ML-DmD16-C3
V035
ML-DmD32
V036
ML-DmD20-C5
V037
S2
V038
S2
V063
Ovary
V0632
Ovary
V064
Ovary
V0642
Ovary
V065
Ovary
V0652
Ovary
V066
Ovary
V0662
Ovary
V067
S2-NP
V073
mbn2
V074
S3
V075
ML-DmBG1-C1
V076
ML-DmBG3-C2
V077
Head
V078
Head
V079
Head
V080
Head
V081
Embryo
V082
Embryo
V083
Male-body
V084
Female-body
V085
CME-W2
V086
Female-body
V088
Ovary
V0882
Ovary
V089
Ovary
V0892
Ovary
V090
Male-body
V091
fGS/OSS
V092
Male-body
V093
Male-body
V094
S2-R+
V095
S2-R+
V096
Ovary
V097
Ovary
V098
Ovary
V125
ML-DmD9
V126
CME-L1
V127
G2
V128
S3
V129
ML-DmBG1-C1
V130
ML-DmBG3-C2
V131
ML-DmD16-C3
V132
ML-DmD32
V133
Sg4
V134
ML-DmD8
V135
CME-W2
V136
Male-body
V137
Head
V138
Male-body
V139
Female-body
V140
Female-body
V141
Female-body
V142
Female-body
V144
OSC
V145
S2
V146
S1
V147
1182-2H
V148
mbn2
GSM1528798
follicle cells
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.......................................................AGAGAAGGTAATGAACTAATCACC-------------------A........................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................AACA-------TGGTGAAGGCGTC--TT...............................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................TACA-ATAA-------TAACA-------TGGTGA..........................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TGGCG---GTGGTTCGGAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................TCACC-------------------AGCATCATCACAACAG.........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
droSim2
GGAAACCAAATGGCCCTGGCG---GTGGTTCGGAGCAG---------CAG---CCACAGCAGGTAATGAACTAATCACC-------------------AGCACCACCACGACAGCAGA------------AACAACT-GAAACATCTTCGCCAAAACAAA-----------------------------ACTACGATAAC------A---------------ACATCTAAACTAGTA---------------------AA-------------------------CATCACA------GCAACAGTCAGCG-----GCA-AGC---------CTAACAA---------------------CAAGGTCTACA-ATAA-------TAACA-------TGGTGGAGGCGTC--TTGAAAA-CC----GAA------------------CAACTAAC-T---------------AAAGTGCATTG--CAGA-TGCATT--C----GTA-AASizeHit CountTotal NormTotalM023
Head
M024
Male-body
M025
Embryo
M053
Female-body
O001
Testis
O002
Head
SRR553485
Ovary
SRR553486
Ovary
SRR553487
Ovary
SRR553488
Ovary
SRR618934
Ovary
V044
Embryo
SRR902008
Ovary
SRR902009
Testis
SRR1275487
Male larvae
SRR1275485
Male prepupae
SRR1275483
Male prepupae
..............CCTGGCG---GTGGTTCGGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00220000000000000000
........AATGGCCCTGGCG---GTGGTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100000001000000000
................................................................................................................................................................................................ACGATAAC------A---------------ACATCTAAACTAGTA---------------------.........................................................................................................................................................................................................................................................2411.00100010000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTAAC-T---------------AAAGTGCATTG--CAGA-...................2311.00100000000010000000
...................................................................................................................................................................................................................................TAAACTAGTA---------------------AA-------------------------CATCACA------GC...............................................................................................................................................................................................................2111.00100000100000000000
.................................................................................................................................................CTTCGCCAAAACAAA-----------------------------ACTACGAT......................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
................TGGCG---GTGGTTCGGAGCAG---------C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000000000000000
........AATGGCCCTGGCG---GTGGTTCGGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000000000
................................................................................................................................................TCTTCGCCAAAACAAA-----------------------------ACTAC.........................................................................................................................................................................................................................................................................................................................2111.00100000100000000000
.....................................................................................................................................................................................................................................................................................................................................................................................TAA-------TAACA-------TGGTGGAGGCGTC--TTGA.............................................................................................2511.00100000010000000000
.....................................................................................................................................................................................................................................................................................................................................................................................TAA-------TAACA-------TGGTGGAGGCGTC--TTGAA............................................................................................2611.00100000000000010000
.............................................................................................................................................................................................................................................................................................CATCACA------GCAACAGTCAGCG-----G..............................................................................................................................................................................................2111.00100000000001000000
...................................................................................................................................................................................................................................................................................................................................................................................................A-------TGGTGGAGGCGTC--TTGAAAA-CC----GA.................................................................................2511.00100010000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACTAAC-T---------------AAAGTGCATTG--CAGA-...................2411.00100000001000000000
.................................................................................................................................................................................................................................................................................................................TCAGCG-----GCA-AGC---------CTAACAA---------------------CAAGGTC............................................................................................................................................2611.00100000000001000000
....................................................................AACTAATCACC-------------------AGCACCACCAC..............................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000000000100000
...............................................................................................................................................................................................................................................................................................................................................................................TACA-ATAA-------TAACA-------TGGTGGAGGCGTC--T................................................................................................2711.00100000001000000000
......................................................................................................CCACCACGACAGCAGA------------AAC......................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................GAA------------------CAACTAAC-T---------------AAAGTGCATTG--CAG.....................2611.00100010000000000000
........................................................................................................ACCACGACAGCAGA------------AACAACT-GAAAC............................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000000000
..........................GGTTCGGAGCAG---------CAG---CCACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000001000000
............................................................................................................................................................................................................................................................................................................AACAGTCAGCG-----GCA-AGC---------CTAACAA---------------------CA.................................................................................................................................................2611.00100000000001000000
droSec2
GGAAACCAAATGGCCCTGGCG---GTGGTTCGGAGCAG---------CAG---CCACAGCAGGTAATGAACTAATCACC-------------------AGCACCACCACGACAGCAGA------------AACAACT-GAAACATCTTCGCCAAAACAAA-----------------------------ACTACGATAAC------A---------------ACATCTAAACTAGTA---------------------AA-------------------------CATCACA------GCAACAGTCAGCG-----GCA-AGA---------CTAACAA---------------------CAAGGTCTACA-ATAA-------TAACA-------TGGTGGAGGCGTC--TTGAAAA-CT----GAA------------------CAACTAAC-T---------------AAAGTGCATAG--CAGA-TGCATT--C----GTA-AASizeHit CountTotal NormTotalM054
Female-body
V113
Male-body
V114
Embryo
V115
Head
.......................................................................................................................................................................................................................................................................................................................................................................................A-------TAACA-------TGGTGGAGGCGTC--TTGAAAA-.........................................................................................2611.0010010
...........................GTTCGGAGCAG---------CAG---CCACAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
................................................................................................................................................................................................................................................................................................................................................................................................AACA-------TGGTGGAGGCGTC--TTGAAAA-C........................................................................................2511.0010100
......................................................................................................................................................................................................................................................................................................................................................................................AA-------TAACA-------TGGTGGAGGCGTC--T................................................................................................2111.0010100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAG--CAGA-TGCATT--C----GTA-A.1911.0010010
...................CG---GTGGTTCGGAGCAG---------CAG---CC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001
.......AAATGGCCCTGGCG---GTGGTTCGGAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010
..............................................................................................................................................................................................................................................................................................................................................................................CTACA-ATAA-------TAACA-------TGGTGGAGGC......................................................................................................2411.0010010
..............................................................................................................................................................................................................................................................................................ATCACA------GCAACAGTCAGCG-----GCA-AGA---------CT.............................................................................................................................................................................2711.0010010
................................................................................................................................................................................................................................................................................................................GTCAGCG-----GCA-AGA---------CTAACAA---------------------CAAGGT.............................................................................................................................................2611.0010010
...............CTGGCG---GTGGTTCGGAGCAG---------C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100
.....................................................................................................................................................................................................................................................................................................................................................................................TAA-------TAACA-------TGGTGGAGGCG.....................................................................................................1911.0010010
............................................................................................................................................................................................................................................................................................................................GCA-AGA---------CTAACAA---------------------CAAGGT.............................................................................................................................................1911.0010010
................................................................................................................................................................................................................................................................................................................................................................................ACA-ATAA-------TAACA-------TGGTGGAGG.......................................................................................................2111.0011000
......................................................................................................................................ACT-GAAACATCTTCGCCAA.................................................................................................................................................................................................................................................................................................................................................................1911.0011000
....................G---GTGGTTCGGAGCAG---------CAG---C.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100
............................................................................................................................................................................................................................................................................................................................................................................................................GGTGGAGGCGTC--TTGAAAA-CT----G..................................................................................2211.0010100
....................................................................................................................................................................................................................................................................................................................................................................................ATAA-------TAACA-------TGGTGGAGGC......................................................................................................1911.0010010
........................GTGGTTCGGAGCAG---------CAG---CCACAGCAGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010010
...................................................................................................................................................................................................ATAAC------A---------------ACATCTAAACTAGTA---------------------.........................................................................................................................................................................................................................................................2111.0010010
droYak3
GGAAACCAAATGGCCCTGGCG---GTGGTTCAGAGCAG---------CAG---CCACAGCAGGTAATGAACTAATCACC-------------------ACC---------ACGACAGA------------AACAACT-GAAACATCTTCGCCAAAGCAAA-----------------------------ACTACGATAAC------A---------------ACATCTA-ACTAGTA---------------------AA-------------------------CATCA--------GCAACAGTCAGCG-----GCATACC---------ATAACAA---------------------CAAGGTCTACA-ATAA-------TAACA-------TGGTGGAGGCCTT--TTGAAAA-CT----GAA------------------AAACTAAC-T---------------AAAGTGCATTA--CAGA-TGCATT--C----ATACATSizeHit CountTotal NormTotalM026
Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
GSM1528802
follicle cells
................................................................................................................................................................................................................................................................................................................GTCAGCG-----GCATACC---------ATAACAA---------------------CAAGGT.............................................................................................................................................2712.00202000000000
..................................................................................................................................................................................................................................................................AA-------------------------CATCA--------GCAACAGTCAGCG-----GC.............................................................................................................................................................................................2211.00100000010000
........................................................................AATCACC-------------------ACC---------ACGACAGA------------AA.......................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
.............................................................................................................................................................................................................................................................................................CATCA--------GCAACAGTCAGCG-----GC.............................................................................................................................................................................................2011.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................GGAGGCCTT--TTGAAAA-CT----GAA------------------AAAC..........................................................2511.00110000000000
.............................................................................................................................................................................................................................................................................................CATCA--------GCAACAGTCAGCG-----GCA............................................................................................................................................................................................2111.00100000010000
................................................................................................................................................................................................................................................................................................................................................................................................AACA-------TGGTGGAGGCCTT--TTGAAAA-CT----G..................................................................................2711.00100000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................AAAA-CT----GAA------------------AAACTAAC-T---------------AAA..................................2111.00100100000000
...........................GTTCAGAGCAG---------CAG---CCACAGCAGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
...................................................................................................................................................................................................................................................................................................................AGCG-----GCATACC---------ATAACAA---------------------CAAGGTCTAC.........................................................................................................................................2811.00101000000000
.........................................................AGCAGGTAATGAACTAATCACC-------------------ACC---------.............................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
..........................GGTTCAGAGCAG---------CAG---CCACAGCAGGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
.................................................................................................................................................................................................................................TCTA-ACTAGTA---------------------AA-------------------------CATCA--------GCAACAGT.........................................................................................................................................................................................................2611.00101000000000
.............................................................................................................................................................AAA-----------------------------ACTACGATAAC------A---------------ACATC........................................................................................................................................................................................................................................................................................2011.00101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................TAA-------TAACA-------TGGTGGAGGCCT....................................................................................................2011.00100010000000
....................................AG---------CAG---CCACAGCAGGTAATGAACTAATC...............................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100000000
......CAAATGGCCCTGGCG---GTGGTTCAGAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................TACA-ATAA-------TAACA-------TGGTGGAGGC......................................................................................................2311.00100100000000
..............................................................................................................................................................................................................................................................................................ATCA--------GCAACAGTCAGCG-----GC.............................................................................................................................................................................................1911.00100000010000
................................................................................................................................................................................................................................................................................................................GTCAGCG-----GCATACC---------ATAACAA---------------------C..................................................................................................................................................2211.00101000000000
......CAAATGGCCCTGGCG---GTGGTTCAGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000
..............................CAGAGCAG---------CAG---CCACAGCAGAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.50100000010000
droEre2
GGAAACCAAATGGCCCTGGCG---GTGGTTCGGAGCAG---------CAG---CCACAGCAGGTAATGAACTAATCACC-------------------AGC---------ACGACAGA------------AACAACT-GAAACATCTTCGCCAAAGCAAA-----------------------------ACTACGATAAC------A---------------ACATCTA-ACTAGTA---------------------AA-------------------------CATCA--------GCAACAGTCAACG-----GCA-ACC---------ATAACAA---------------------CAAGGTCTA-----------------------------------------------------------------------------AACTAAC-----------------AAAGTGCATTA--CAGT-TGCATT--C----ATA-AASizeHit CountTotal NormTotalM055
Female-body
M057
Embryo
V060
Head
V040
Embryo
V107
Male-body
V108
Head
GSM1528801
follicle cells
.........ATGGCCCTGGCG---GTGGTTCGGAGCAG---------CA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................28154.005400000054
........AATGGCCCTGGCG---GTGGTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
....................G---GTGGTTCGGAGCAG---------CAG---C.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100
.GAAACCAAATGGCCCTGGCG---GTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
.........ATGGCCCTGGCG---GTGGTTCGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
...............CTGGCG---GTGGTTCGGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000
.....................................................................ACTAATCACC-------------------AGC---------ACGACAGA------------AA.......................................................................................................................................................................................................................................................................................................................................................................................2311.0010001000
..............................................................................................................................................................................................................................................................................................ATCA--------GCAACAGTCAACG-----GC.............................................................................................................................................................................................1911.0010100000
..................................................................................................................................AACAACT-GAAACATCTTCGCG...................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
...........................................................................................................................................................................................................................................TA---------------------AA-------------------------CATCA--------GCAACAGTCAAC.....................................................................................................................................................................................................2111.0010001000
...........GGCCCTGGCG---GTGGTTCGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
..................................................................................................................................................................................................................................................................AA-------------------------CATCA--------GCAACAGTCAACG-----GCA-ACC---------AT.............................................................................................................................................................................2811.0011000000
................................................................AATGAACTAATCACC-------------------AGC---------ACG..........................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000
.........................................................AGCAGGTAATGAACTAATCACC-------------------ACT---------G............................................................................................................................................................................................................................................................................................................................................................................................................2611.0010001000
......................................................................................................................................................................................................AC------A---------------ACATCTA-ACTAGTA---------------------AA-------------------------CATCA--------.................................................................................................................................................................................................................2411.0010001000
........................................................................AATCACC-------------------AGC---------ACGACAGA------------.........................................................................................................................................................................................................................................................................................................................................................................................1811.0010001000
....ACCAAATGGCCCTGGCG---GTGGTTC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000
..............................................................................................................................................................................................................................................................................................ATCA--------GCAACAGTCAACG-----GCA-...........................................................................................................................................................................................2011.0010000010
............GCCCTGGCG---GTGGTTCGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
.................................................................................................................................................................................................................................................................................................A--------GCAACAGTCAACG-----GCA-ACC---------AT.............................................................................................................................................................................2211.0010001000

Generated: 05/18/2015 at 02:45 AM