ID:

dmo_2514

 Coordinate:

scaffold_6680:17059282-17059432 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-6.1 -5.9 -5.7

Flybase annnotation

CDS [Dmoj\GI11684-cds]; exon [dmoj_GLEANR_11760:6]; intron [Dmoj\GI11684-in]

Repeatable elements

NameClassFamilyStrand
TART_DVLINEJockey-
mature
star
  1. scaffold_6328:1398821-1398838 +
  2. scaffold_6359:711160-711177 +
  3. scaffold_6359:2998485-2998502 +
  4. dmo_3121  scaffold_6359:3469225-3469242 +
  5. scaffold_6473:2068846-2068863 +
  6. scaffold_6473:11669186-11669203 +
  7. scaffold_6473:12784904-12784921 +
  8. scaffold_6496:9044623-9044640 +
  9. scaffold_6496:17102079-17102096 +
  10. scaffold_6500:536305-536322 +
  11. scaffold_6500:1605475-1605492 +
  12. scaffold_6500:4835940-4835957 +
  13. scaffold_6500:25313662-25313679 +
  14. scaffold_6540:5702573-5702590 +
  15. scaffold_6540:15262140-15262157 +
  16. scaffold_6540:22289467-22289484 +
  17. scaffold_6540:22558430-22558447 +
  18. scaffold_6540:23127594-23127611 +
  19. scaffold_6680:5254518-5254535 +
  20. scaffold_6680:18423450-18423467 +
  21. scaffold_6328:4210298-4210315 -
  22. scaffold_6340:36881-36898 -
  23. scaffold_6359:4434412-4434429 -
  24. scaffold_6473:4964829-4964846 -
  25. scaffold_6496:3877524-3877541 -
  26. scaffold_6496:13412522-13412539 -
  27. scaffold_6496:23295379-23295396 -
  28. scaffold_6500:2511916-2511933 -
  29. scaffold_6500:8953283-8953300 -
  30. scaffold_6500:9831926-9831943 -
  31. scaffold_6500:17554289-17554306 -
  32. scaffold_6500:28091998-28092015 -
  33. scaffold_6500:28366886-28366903 -
  34. scaffold_6540:1886781-1886798 -
  35. scaffold_6540:13303409-13303426 -
  36. scaffold_6540:19663273-19663290 -
  37. scaffold_6680:823561-823578 -
  38. scaffold_6680:7057738-7057755 -
  39. scaffold_6680:11632380-11632397 -
  40. dmo_2514  scaffold_6680:17059302-17059319 -

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ACCGCCGCAGCAGCAGCAACAGCGTCGCCTGTTGCTGGACGCCAATTCGGGTAGTTATAAAACGGCAGCAGCACTAACCAACAATCACCAATTCACCAACAACGCACCTGCTGCCCAGCAAATGCTTAACAACAGCAACAACAACAGCAGCAGGGGCATCACCAGCAGCAGCAGCAACAGCAATAACAACAACCTGATGTTGCCGCATGCTCGTAGCTTTCATCTACACGAAACAACATTCAACAACAACA
********************************************************************************************************************************************......((.((..((......)).)).))............********************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M060
embryo
 V049
head
 V041
embryo
 V110
male body		 M046
female body
............................................................................................................................................ACAACAGCAGCAGGGGCA............................................................................................. 18 0 1 1.00 1 0 1 0 0 0
................................................................................................................................................CAGCAGCAGGGGCATCACCA....................................................................................... 20 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................GCAGGAGGGGCATTACCA....................................................................................... 18 2 4 0.25 1 0 0 1 0 0
......................................................................................................................................GCAACAACAACAGCAGCAGG................................................................................................. 20 0 16 0.06 1 0 0 0 1 0
...................................................................................................................................................................AGCAGCAGCAGCAACAGC...................................................................... 18 0 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................CACCAGCAGCAGCAGCAACAGC...................................................................... 22 0 20 0.05 1 1 0 0 0 0
...................................................................................ATCCCAAATCCACCAACAAC.................................................................................................................................................... 20 3 20 0.05 1 1 0 0 0 0
...............................................................................................................................AACAACAGCAACAACAACAG........................................................................................................ 20 0 20 0.05 1 0 0 0 0 1

Anti-sense strand reads

TGGCGGCGTCGTCGTCGTTGTCGCAGCGGACAACGACCTGCGGTTAAGCCCATCAATATTTTGCCGTCGTCGTGATTGGTTGTTAGTGGTTAAGTGGTTGTTGCGTGGACGACGGGTCGTTTACGAATTGTTGTCGTTGTTGTTGTCGTCGTCCCCGTAGTGGTCGTCGTCGTCGTTGTCGTTATTGTTGTTGGACTACAACGGCGTACGAGCATCGAAAGTAGATGTGCTTTGTTGTAAGTTGTTGTTGT
**********************************************************************......((.((..((......)).)).))............******************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M060
embryo
 V056
head
 M046
female body
 V110
male body
........................................................................................................................................................................................................................................TGTTGTAAGTTGTTGTTGT 19 0 1 1.00 1 1 0 0 0
...................................................................................................................................................................................................................................TGCTGTGTTGGAAGTTGGTGT... 21 3 2 0.50 1 0 1 0 0
.....................................................................................................................................................................................TTAGTGTTGTTGAACTACTACG................................................ 22 3 5 0.20 1 1 0 0 0
...........................................................................TTGGTTTTTAGGGGCTAAG............................................................................................................................................................. 19 3 20 0.05 1 0 0 1 0
...................................................................................................................................................................................................................................AGCTTTGGTCTAAGTTGTTG.... 20 3 20 0.05 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6680:17059232-17059482 - dmo_2514 ACCGCCGC-----AGCAG-CAGCAACAGCGTCGCCTGTTGCTGGACGCCAATTCGGGTAG-TTATAAAACGGCAGCAGCACTAACCAACAATCACCA---ATTCACCA--------------------------------------------------------------------------------------------AC---------A--------------------------------------ACGCACCTGCTGCCCAGCAAATG---CTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAACAGCAACAACAACAGCAGCA------------------GGGGCATCACCAGCAGCAGC------A------GCAACAGCAATAACAACAAC--------------------------------------------------------------CTGATGTTGC----------------------------------------------------CGCATGCTCGTAGCTTTCAT----CTAC------A-CGAAAC---------AA-------------C------------------A---TTCAAC-AACAACA-----------------------------------------
droVir3 scaffold_13049:22456499-22456723 - dvi_20956 GCCGCCGC-----AGCAG-CAGCAACAGCGCCGCCTGCTGCTGGACGCAAATTCGGGTAG-TTATAAAACGGAAGCCACACTAACCAACAATCACCACCAATTCACGA----------------------------------------------------------------------------------------------------------------------------------------------ACGCACCAGCTGGCAAGCTAAAGCAGCCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAACATTCGCAACAACAGCAGCA------------------GACTCAGCAGCAACA---------------------------------------------------------------------------------------------------------------------------------------------TGTTGCAGCGGCAACACTTGCAGCATGCTCAAAGCTTTTAT-----------------------------------------------------------------C---TACACG-AAACACT-----------------------------------------
droGri2 scaffold_15110:21084166-21084390 + GCCGCCGC-----AGCAA-CACCAACAACGTCGCCTGCTGCTGGACTCCAATTCGGGTAG-TTATAAAGCGGCAGCAGCACTAACCAACAATCACCAACAA----------------------------------------------------------------------------------------------------C---------A--ACG-ACAAAAACAACAACAGCAACATAAACAAGACACCGCACACGCTGACGCGCTAAAG---CCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACAAA------------------A------------------GAAGCAACA---------------------------------------------------------------------------------------------------------------------------------------------------TGTTGCAGCCGCAACAGCTACAGCATGCACAAAGCTTC--------------------------------------------------------------------T---ATCTAC-ACGAAAC-----------------------------------------
droWil2 scf2_1100000013329:784-1026 - ACAATGGC-----AGCAA-CAACAACAGCAACAACAACTGCAG--------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAACAATTGCAGCAACAAC-------------------------------------------------------------------------------------AGCAACAGCAGCAACAATGGCAGCAACAACAACAG-----------------CA--------ACA------------ACAACTGCAGCAGCAACAACAACAGCAGCA------A---------CAACA---------------------------------------------------------ACT------------------GCAGCAGCA---ACAATTGC------A------GCAACAACAACAACAGCAGCAACAACAACAGCAGCAGCA----A------------------CAACA-----------------------------------------GC------AT-------------CAGCA------ACA-------------------------GCA---ACA-GCAGCA---------ACG------------A------------------A---TGCAAC-AACAACA-----------------------------------------
dp5 XL_group1e:264588-264833 - ACAGCAGC-----AACAG-A-GCAACAC-G----CTGCCGCTGAAA-------AAGTCAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTTAAAAGGACAA-----AA--------GCAACCAAAGCAGCT---------GCCAATATTGCAACAACAGCAA---------------------------------------------------CTTCAGCAACAACAACAACTGCAACTTCA------------------ACAACAACAGCAACAACAAC------A------ACAGCAACAACAACAGCAACTGCAACT----------------T------------------CAGCAAC------------A--------------------------ACAACAACAA----------------------------------------CA----CCA---------ACAAGCAGCGCCCCGCAATGCG-AATGTACAACCA------------------GAACATCAAC-AAAACCA-----------------------------------------
droPer2 scaffold_3:4686120-4686370 + GCCGCCAC-----GGCACCCAGCAGCAGTGCAGCGCGAC-------GCGGAGCCAGGCAGAGTGCG-----------------------------------------------------------------------------------------C------------AGCAG----------------------CAACAGCAGCAGCAACAAC---AG------------------------------------------------------CAG---CAGCAACAGCAGCAGCAACAACA-------------------------------GC-------------------------------------A---------------GCAGC---------ATCATCAAGCGCAGCAGCAACAAC---A---------------------------------------------------ACAGCAGCA------------------GAGGCA---------GGTGTACCAGCAGCA---GCAGCAAC---------------AGTTGCGTCAGCAGCACCAA-CAAAT------------------------GTCG-----CAGATGTCGC----------------------------------------------------AGCAGGCGCACT--------------------------------------------------ATCCC------------------GTGCAGCAGC-AGCAACA-----------------------------------------
droAna3 scaffold_12903:386508-386743 + TCCGGCGCTTAGTGGCGG-CAGCAGCAGCATAG-----------------A---------------------------------------------------------------------------------TTTTGGAGA------------------------------------------------------CA-TGGC-TCATGGACTGCGACAG------------------------------------------------------CAG---AAGCAGCAGCTACAACAGC----AACAACAACAGCAACAACAACAGCAACA----------------------------------------------------------------TTTCTACCAGCAACAGATAC---------------A---ACAACAACAACAAC---------------------------------AACAACAACA------------------GCAGCAGCAGCAACAGCAAC------------------------AGCAAC------AACA------------TCAT-CATCA------------------------G------------------CTGCTAGCCACCGGCGGCAACAA------------------------------------------------------------------------------------------------------------------C---AGCAGC-AGCAGCA-----------------------------------------
droBip1 scf7180000391693:12565-12807 - CCAGCAGG-----AGCAG-CAGCAGCAGTTGCAACACATGCAGGCCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------ACT-------------------------------------------------------------------------------------ATCTGCAGGAACAACAGCAGCAGGAGTTGCACAAGTTGCAAGAGCAG-----CA--------CAAA---CAGCAGCA---------GCAGCAGATGCTACAGCAGCA---------------CC---A---------------------------------------------------------------------------------------GCATCAGCAGC------A------GCAATTGTTGCAACAGCAACGGCAACAGCAACAGCAGCAGCAA-CAC-----------------------------------TTGATGCAAC---------AGCA---GC------TT-------------AATCA------GCA---------TCTCC-------------------A-GCAGCC---------AAT-------------------------------C---ATCAACATGCAACA-----------------------------------------
droKik1 scf7180000302685:196308-196541 + TTTACAGC-----AGCAG-CAACAACAGCATCTACAGCAGCAG--------------------------------------------------------------------------------------------------------------------------------------------------------CAACAACAGCATTTACAGCAGC-------------------------------------------------------------------------------------AGCAGCAGCAGCATTTACAGCAGCAGCAGCAACAG-----------------CA--------TCT------------ACAGCAGCAGCAGCAACATCACCAGCAGCA------A---------CAACA---------------------------------------------------------ACA------------------GCATCTACAGCAGCAACAGC---AGCAGCTGCAGCAACATCTACAGCAGC------AACA----------------G------------------CAGCAGC------------A--------------------------TCA---------TC-------------T------ACA-------------------------GCA---GCA-GCAGCA---------T---------------------------------C---TACAGC-AACAGCA-----------------------------------------
droFic1 scf7180000453925:730498-730722 - GCCACAGC-----AGCAG-CAGCAGCGAT--------CCACTGAAAGCCCCTTCCGAT---TTGCACAGCAGCAACAGCA-------ACAGTCGCCGC-----------------------------------------------------------------------------------------------------AGC--------A---ACG-------------------------------------------------------------------------------------GCCGCCAACAGCAATATCGCCGCTGGC-------TCA-------------------------GCA------------GCA------------------------GCAA---------------------------------------------------CTTCAACAGCAACAGCAACTTCAACAGCA------------------ACAGCAGCAGTTGCAGCAAT---------------------------TGCAGCTGCAACA----------------TCAGCAGCTTCAGC------AA--------------------------------------CAGCAGCAACAA------------------------------------------------------------------------------------------------------------------C---TGCAGC-AGCAACA-----------------------------------------
droEle1 scf7180000491008:2313888-2314129 - CC-GCAAC-----ATCAA-TACCAACAACA-------------------------------------------------------------------------------------------------------------------CCAAATATTAC------------ACCAA----------------------CAACAACAATTGCCAAATCACC-------------------------------------------------------------------------------------ACCATCATCATCATCATCACCACCACCATCACAGTCA-------------------------ACT------------ACAACTCCAACAACAACAACAGCAACATCA------------------------------------------------------------------------ACTACAACA------------------GCAGCAACACCAACAACAAC---AGCC------GCTACACCAACAACAGCAATTGCAACA----------------C------------------CAGCAGC------------A--------------------------ACA---------CC-------------A------ACA-------------------------ACACTATCA----ACA---------ACAT-GC--------C------------------C---TTCAAC-AACAACA-----------------------------------------
droRho1 scf7180000779336:26294-26527 - GTCCCAGC-----AGCAG-CAGCAACTCTGCCACTAG-------------------------------------------------------------------------------------------------------------------CAACACC---------AGTAG----------------------CAGTAGCAATAGCTATGCCAAC-------------------------------------------------------------------------------------AGTCCGCTCAGCCCGCTCACACCCACTCCCACGGCAA-------------------------CTG------------CCA---------GCAATCCCA-----------------------GT------------------------------------------CATCAGCAGCAACACCAGCAGCA------------------GCAGCAACACAACCAGCAGC------A------GCAGCAGCAACAACACAACCAGCAACA----------------T------------------CAGCAGC------------A--------------------------GCA-------------------------------ACA---------TCACCC----------------TCA----GCA---------CCA-------------------------------C---GACAAC-AGCAATA-----------------------------------------
droBia1 scf7180000301506:690722-690953 + AGCGGCGC-------CAG-ACGCTCCACCTTATCCAGTCGCTGGCCGCCCAGGT---------GCT------------------------------------------CTTCAACAAGCAGGAGAAGCAACA-------------GCAGGAGCAGT------------ACCAA----------------------CAGCAACAGCAGCAGCATCATC-------------------------------------------------------------------------------------ATCATCATCAGCAGCA-------------------------------------------------------------------------------------------------G---------C---A---GCAGCAGCAGCAGCAGCAGCAACAGCAACACCAGCAGCATCAGCAGCAGCAACACCA------------------GCAGCAACGTCAGCAACAGT------T------CCTGGACCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------------------G---CGCAGC-AGCAACA-----------------------------------------
droTak1 scf7180000415287:239447-239689 + ACAGCAGC-----AGTCG-CCGCAGCAACGTCCACC--AACAGCA-----A---------------------------------------------------------------------------------TTTCGCCGCTGGCTC---AGGTGC------------AACAG----------------------CAGCAGCAACAGCAATATCAGC-------------------------------------------------------------------------------------AGCAGTTACAGCA-------------------------------------------------GCAACAACTGCAGCA---------GCAACAATTGCAACAGCAACAG---------------C---TACAGCAGCAGCAACTGC---------------------------------AGCAGCAACA------------------ACTACAGCAGCAACAACTAC------A------GCAGCAACAATTACAGCAGCAGCAACT----------------A------------------CAGCAGC---------------------------------------------------------------------------A---------ACAGT--------------------------T---------G---------------------------------C---AACAGC-AACAACA-----------------------------------------
droEug1 scf7180000409554:128175-128402 - ACAGCAGC-----AGCAG-CAATTGCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAC---TG------------------------------------------------------CAG---CAGCAACAGCTGCAACAGCAACA-------------------------------AT-------------------------------------TGCAGCAGCA------------------------ACAATTGCAACAGCAAAAAC---T---ACAGCAACAACAAT------------------------------------T------------------------GCAGCAACAGCAACA------------------GCAGCTAC---------------AGCAGCAGCAACAGCAACTT-CAACA------------------------GCAGCAGCA--------------------------GCAACAGCAACAACAGGC------------------A-------------------------GCTCAGTCA----GTA---------CCAT-GG--------CGCACTCAACGCACGCAGCC---TGCAGC--ACAACA-----------------------------------------
dm3 chr3L:9701939-9702195 + GCGGCCGC-----TGCCG-CCGCAC---------------------GCGAATCCCTGCTGAAT-----------------------------------------------------------------------------------------TCATATCTTTATCAAAA----GGATAGCGATGCCGGCAATTAT--ATGGC-GGAGCAGAGCTACT-------------------------------------------------------------------------------------GGCAACAGCACCAGCAACATCACCACCAACAGCAGCA-------------------------GCA------------GCA------------------------GCAG---------------------------------------------------CATCAACAACAACAGCAGCAGCAACATCA---------------ACAGCAGCAACATCAGCAGCAGC------A------GCAACACCAACAACAGCAAC------A----------------C------------CAACAGCAGCAACAGCAACA--------------------------------GAAGCAG------------------------------------------------------------------------------------------------------------------C---TCCAGC-AGCAGCA-----------------------------------------
droSim2 3r:7322039-7322253 - CC-GCAAC-----ATCAA-TACCAACAACA-------------------------------------------------------------------------------------------------------------------CCAAATATTAC------------ACCAA----------------------CAACAACAATTGCCAAATCACC-------------------------------------------------------------------------------------ACCATCATCACCATCACCACCACCACCATCACAGTCA-------------------------GCT------------ACA------------------------ACAA---------------------------------------------------CTCCAACAACAACAGCAACAACAACAACA------------------GCAGCAACACCAACAACAGC------C------GCTACACCAACAACAGCAACTGCAACA----------------C------------------CAGCAGC------------A--------------------------GCAACAA------------------------------------------------------------------------------------------------------------------C---ACCACC-AACAACA-----------------------------------------
droSec2 scaffold_12:200546-200784 - CC-GCAAC-----ATCAA-TACCAACAACA-------------------------------------------------------------------------------------------------------------------CCAAATATTAC------------ACCAA----------------------CAACAACAATTGCCAAATCACC-------------------------------------------------------------------------------------ACCATCATCACCATCACCACCACCACCATCACAGTCA-------------------------GCT------------ACA------------------------ACAA---------------------------------------------------CTCCAACAACAACAGCAACAACAACAACA------------------GCAGCAACACCAACAACAGC------C------GCTACACCAACAACAGCAACTGCAACA----------------C------------------CAGCAGC------------A--------------------------GCAACAACAC----------------------------------------CA----CCAACAACACTATCA----GCA---------ACAT-GC--------C------------------A---T-------TCAACA-----------------------------------------
droYak3 X:19081649-19081882 - ACCGCCCC-----GGCAG-CAACAGCAGCAGCACCAACAACAACA-------------------------------------------------------------------------------------------------------AGCATT------------------------------------------------CGC-GTC---GCA------------------------------------------------------------G---CAGCGCCGGCAGCAACAATAACA-------------------------------A--ATAGCAAAAACTGAGCAGCGTTCGGCAAAGCG---CAGCAACA---------GCA---------------ACAAAGGCAACACTAAAACT---A---------------------------------------------------------ACA------------------GCAGCGACACCAATTGCTAC------T------GCAACACCAGCAGCAGAAAC---AAC--------------------------------------------------------CAAGC--GG-CGGCAAGTCAGCAGCAGCAACAA------------------------------------------------------------------------------------------------------------------C---AACAAC-AGCAGCA-----------------------------------------
droEre2 scaffold_4770:7679049-7679288 - ATCATCAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACCATCACCACCATCACAGTCA-------------------------GCT------------ACA------------------------ACAA---------------------------------------------------CTCCAACAACAACAGCAACAACAACAACAGCAGCAACACCAACAACAACAGCAACACCAACAACAGC------C------GCTACACCAACAACAGCAACTGCAACA----------------C------------------CAGCAGCAGCAACA--------------------------------AC---AACAC----------------------------------------CA----CCAACAACACTATCA----GCA---------ACAT-GC--------C------------------A---TTCAAC-AACAGCAGGCTAGCAAAATCTCATATCGTGGCATTTTCACCACCACAG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
ACCGCCGC-----AGCAG-CAGCAACAGCGTCGCCTGTTGCTGGACGCCAATTCGGGTAG-TTATAAAACGGCAGCAGCACTAACCAACAATCACCA---ATTCACCA--------------------------------------------------------------------------------------------AC---------A--------------------------------------ACGCACCTGCTGCCCAGCAAATG---CTT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAACAGCAACAACAACAGCAGCA------------------GGGGCATCACCAGCAGCAGC------A------GCAACAGCAATAACAACAAC--------------------------------------------------------------CTGATGTTGC----------------------------------------------------CGCATGCTCGTAGCTTTCAT----CTAC------A-CGAAAC---------AA-------------C------------------A---TTCAAC-AACAACA-----------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAGCAGCA------------------GGGGCA...........................................................................................................................................................................................................................................................................................................................1811.001001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCA------------------GGGGCATCACCA.....................................................................................................................................................................................................................................................................................................................2011.001000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACAACAGCAGCA------------------GG...............................................................................................................................................................................................................................................................................................................................20160.061000001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGC------A------GCAACAGC........................................................................................................................................................................................................................................................................................18200.051000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCAGCAGCAGC------A------GCAACAGC........................................................................................................................................................................................................................................................................................22200.051000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGCAACAACAACAG........................................................................................................................................................................................................................................................................................................................................................20200.051100000
droVir3
GCCGCCGC-----AGCAG-CAGCAACAGCGCCGCCTGCTGCTGGACGCAAATTCGGGTAG-TTATAAAACGGAAGCCACACTAACCAACAATCACCACCAATTCACGA----------------------------------------------------------------------------------------------------------------------------------------------ACGCACCAGCTGGCAAGCTAAAGCAGCCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACAACATTCGCAACAACAGCAGCA------------------GACTCAGCAGCAACA---------------------------------------------------------------------------------------------------------------------------------------------TGTTGCAGCGGCAACACTTGCAGCATGCTCAAAGCTTTTAT-----------------------------------------------------------------C---TACACG-AAACACT-----------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCGGCAACACTTGCA...............................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000001000
...................................TGCTGCTGGACGCAAATTCGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAACACTTGCAGCATGCTCAAAGCTT................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCGGCAACACTTGCAG..............................................................................................................................................2011.001000000000000000000000010000000000000000000000000000000000000000
..........................................GGACGCAAATTCGGGTAG-TTATA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000010000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................ACGCACCAGCTGGCAAGCTAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000001000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAAGCTTTTAT-----------------------------------------------------------------C---TACACG-A...............................................2111.001001000000000000000000000000000000000000000000000000000000000000
..CGCCGC-----AGCAG-CAGCAACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1990.111000000100000000000000000000000000000000000000000000000000000000
droGri2
GCCGCCGC-----AGCAA-CACCAACAACGTCGCCTGCTGCTGGACTCCAATTCGGGTAG-TTATAAAGCGGCAGCAGCACTAACCAACAATCACCAACAA----------------------------------------------------------------------------------------------------C---------A--ACG-ACAAAAACAACAACAGCAACATAAACAAGACACCGCACACGCTGACGCGCTAAAG---CCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACAAA------------------A------------------GAAGCAACA---------------------------------------------------------------------------------------------------------------------------------------------------TGTTGCAGCCGCAACAGCTACAGCATGCACAAAGCTTC--------------------------------------------------------------------T---ATCTAC-ACGAAAC-----------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
ACAATGGC-----AGCAA-CAACAACAGCAACAACAACTGCAG--------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAACAATTGCAGCAACAAC-------------------------------------------------------------------------------------AGCAACAGCAGCAACAATGGCAGCAACAACAACAG-----------------CA--------ACA------------ACAACTGCAGCAGCAACAACAACAGCAGCA------A---------CAACA---------------------------------------------------------ACT------------------GCAGCAGCA---ACAATTGC------A------GCAACAACAACAACAGCAGCAACAACAACAGCAGCAGCA----A------------------CAACA-----------------------------------------GC------AT-------------CAGCA------ACA-------------------------GCA---ACA-GCAGCA---------ACG------------A------------------A---TGCAAC-AACAACA-----------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................................................................................................................................................AACAAC-------------------------------------------------------------------------------------AGCAACAGCAGCAACAATGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.35707000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGC------A------GCAACAACAACAACAGC...............................................................................................................................................................................................................................................................................24100.20202000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAACAGCAGCA...........................................................................................................................................................................................................................................................................20200.20400040
.......................................................................................................................................................................................................AACAATTGCAGCAACAAC-------------------------------------------------------------------------------------AGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.15301020
.......................................................................................................................................................................................................AACAATTGCAGCAACAAC-------------------------------------------------------------------------------------AG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.15303000
................................................................................................................................................................................................................AGCAACAAC-------------------------------------------------------------------------------------AGCAACAGCAGCAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.15303000
..........................................................................................................................................................................................................................................................................................................................AACAATGGCAGCAACAACAACAG-----------------C..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.15302010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-------------CAGCA------ACA-------------------------GCA---ACA-GCAGCA---------ACG------------A------------------A---.......................................................2690.11100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA---------------------------------------------------------ACT------------------GCAGCAGCA---ACAATTGC------.......................................................................................................................................................................................................................................................................................................25200.10202000
.......................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACAACAGCAGCA------A---------CA..................................................................................................................................................................................................................................................................................................................................................................................................................21200.10200020
................................................................................................................................................................................................................AGCAACAAC-------------------------------------------------------------------------------------AGCAACAGCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.10202000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAGCAGCAGCA----A------------------CAAC..............................................................................................................................................................................................................................20200.10200002
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---ACAATTGC------A------GCAACAACAACAACAGC...............................................................................................................................................................................................................................................................................27100.10101000
.............................................................................................................................................................................................................TGCAGCAACAAC-------------------------------------------------------------------------------------AGCAACAGCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.10202000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGC------A------GCAACAACAACAACAG................................................................................................................................................................................................................................................................................23100.10101000
...................................................................................................................................................................................................................................................................................................................................AGCAACAACAACAG-----------------CA--------ACA------------ACAACTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.10202000
.........................................................................................................................................................................................................................................................................................................................CAACAATGGCAGCAACAACAACAG-----------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.10201010
...............................CAACAACTGCAG--------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAACAATTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.10202000
.............AGCAA-CAACAACAGCAACAACAACTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.10202000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA------ACA-------------------------GCA---ACA-GCAGCA---------ACG------------..............................................................................22110.09100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA-----------------------------------------GC------AT-------------CAGCA------ACA-------------------------GCA---ACA-GCAG........................................................................................................27120.08100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAGCA----A------------------CAACA-----------------------------------------GC------AT-------------CAG..........................................................................................................................................................27120.08100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA----A------------------CAACA-----------------------------------------GC------AT-------------CAGCA------ACA-------------------------GCA---ACA-G...........................................................................................................27120.08101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGC------A------GCAACAACAACA....................................................................................................................................................................................................................................................................................19130.08100010
................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCAGCAACAACAACAGCAGCA------A---------CA..................................................................................................................................................................................................................................................................................................................................................................................................................28140.07100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA----A------------------CAACA-----------------------------------------GC------AT-------------CAGCA------ACA-------------------------GC....................................................................................................................22140.07100010
..............................................................................................................................................................................................................................................................................................................................................................................A------------ACAACTGCAGCAGCAACAACAACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................25150.07101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----------------------------------------GC------AT-------------CAGCA------ACA-------------------------GCA---ACA-GCAG........................................................................................................23170.06101000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA-----------------------------------------GC------AT-------------CAGCA------ACA-------------------------GC....................................................................................................................19170.06100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-------------CAGCA------ACA-------------------------GCA---ACA-GCAGCA---------AC...........................................................................................24190.05101000
..............................................................................................................................................................................................................................................................................................................AGCAACAGCAGCAACAATGGCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
.....................................................................................................................................................................................................................CAAC-------------------------------------------------------------------------------------AGCAACAGCAGCAACAATGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
.............................................................................................................................................................................................................................................................................................................................AATGGCAGCAACAACAACAG-----------------CA--------ACA------------AC................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAGCAGCAGC..........................................................................................................................................................................................................................................................19200.05101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA---------------------------------------------------------ACT------------------GCAGCAGCA---ACAATTGC------A------GC..............................................................................................................................................................................................................................................................................................28200.05101000
...........................................................................................................................................................................................................................................................................................................................................CAACAG-----------------CA--------ACA------------ACAACTGCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
....................................................................................................................................................................................................................ACAAC-------------------------------------------------------------------------------------AGCAACAGCAGCAACAATGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
.............AGCAA-CAACAACAGCAACAACAACTGCAG--------------------------------------------------------------------------------------------------------------------------------------------------------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.05101000
................AA-CAACAACAGCAACAACAACTGCAG--------------------------------------------------------------------------------------------------------------------------------------------------------C.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---ACAATTGC------A------GCAACAACAACAG...................................................................................................................................................................................................................................................................................23200.05101000
........................................................................................................................................................................................................................................................................................................................................CAACAACAG-----------------CA--------ACA------------ACAACTGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
............................................................................................................................................................................................................................................................................................................................................AACAG-----------------CA--------ACA------------ACAACTGCAGCAGCAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................AACA---------------------------------------------------------ACT------------------GCAGCAGCA---ACAATTG..............................................................................................................................................................................................................................................................................................................23200.05101000
...............................................................................................................................................................................................................................................................................................................................TGGCAGCAACAACAACAG-----------------CA--------ACA------------A.................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
....................AACAACAGCAACAACAACTGCAG--------------------------------------------------------------------------------------------------------------------------------------------------------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
..AATGGC-----AGCAA-CAACAACAGCAACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
...................................................................................................................................................................................................................................................................................................................................AGCAACAACAACAG-----------------CA--------ACA------------ACAACTGCAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.05101000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA------ACA-------------------------GCA---ACA-GCAGCA---------.............................................................................................19200.05101000
....TGGC-----AGCAA-CAACAACAGCAACAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
................................AACAACTGCAG--------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAACAATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
..AATGGC-----AGCAA-CAACAACAGCAACAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
..AATGGC-----AGCAA-CAACAACAGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................AACA---------------------------------------------------------ACT------------------GCAGCAGCA---ACAATT...............................................................................................................................................................................................................................................................................................................22200.05101000
......................................................................................................................................................................................................CAACAATTGCAGCAACAAC-------------------------------------------------------------------------------------AGCAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
...........................................................................................................................................................................................................................................................................................................................ACAATGGCAGCAACAACAACAG-----------------CA--------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
........................................................................................................................................................................................................................................................................................................................................................................................................................A------A---------CAACA---------------------------------------------------------ACT------------------GCAGCAGCA---AC...................................................................................................................................................................................................................................................................................................................21200.05101000
...................CAACAACAGCAACAACAACTGCAG--------------------------------------------------------------------------------------------------------------------------------------------------------C.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
................................AACAACTGCAG--------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAACAATTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
................AA-CAACAACAGCAACAACAACTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
.............................................................................................................................................................................................................................................................................................................................................ACAG-----------------CA--------ACA------------ACAACTGCAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
...................................................................................................................................................................................................................................................................................................................................................................A--------ACA------------ACAACTGCAGCAGCAACA................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
...............................................................................................................................................................................................................................................................................................................................TGGCAGCAACAACAACAG-----------------CA--------ACA------------ACAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05100010
...............................................................................................................................................................................................................................................................................................................................................AG-----------------CA--------ACA------------ACAACTGCAGCAGCAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
..........................................................................................................................................................................................................AATTGCAGCAACAAC-------------------------------------------------------------------------------------AGCAACAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
...................................................................................................................................................................................................................AACAAC-------------------------------------------------------------------------------------AGCAACAGCAGCAACAATGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
.......................................................................................................................................................................................................AACAATTGCAGCAACAAC-------------------------------------------------------------------------------------AGCAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
.......................................................................................................................................................................................................................................................................................................................AGCAACAATGGCAGCAACAACAACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
......................................................................................................................................................................................................................................................................................................................................AACAACAACAG-----------------CA--------ACA------------ACAACTGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
.............................................................................................................................................................................................................................................................................................................................AATGGCAGCAACAACAACAG-----------------CA--------ACA------------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAACAACAACAGCA...............................................................................................................................................................................................................................................................21200.05100001
................................................................................................................................................................................................................................................................................................................................GGCAGCAACAACAACAG-----------------CA--------ACA------------A.................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
.........................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAGCAGCA------A---------CAAC................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
..............................................................................................................................................................................................................................................................................................................AGCAACAGCAGCAACAATGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101000
..AATGGC-----AGCAA-CAACAACAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
..........................................................................................................................................................................................................................................................................................................................AACAATGGCAGCAACAACAACAG-----------------CA--------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
...............................................................................................................................................................................................................................................................................................................................................AG-----------------CA--------ACA------------ACAACTGCAGCAGCAACA................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
...................................................................................................................................................................................................................................................................................................................................................................A--------ACA------------ACAACTGCAGCAGCAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
....TGGC-----AGCAA-CAACAACAGCAACAACAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05100010
.......................................................................................................................................................................................................AACAATTGCAGCAACAAC-------------------------------------------------------------------------------------AGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
.............................AACAACAACTGCAG--------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAGCAGCAACAACAACA..................................................................................................................................................................................................................................................................21200.05100010
...............................................................................................................................................................................................................................................................................................................................TGGCAGCAACAACAACAG-----------------CA--------ACA------------ACAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05101000
.......................................................................................................................................................................................................AACAATTGCAGCAACAAC-------------------------------------------------------------------------------------AGCAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
...........................................................................................................................................................................................................................................................................................................................ACAATGGCAGCAACAACAACAG-----------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
......................................................................................................................................................................................................................................................................................................................................AACAACAACAG-----------------CA--------ACA------------ACAACTGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
....TGGC-----AGCAA-CAACAACAGCAACAACAAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05101000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGCAGCAGCA----A------------------CAA...............................................................................................................................................................................................................................20200.05100010
..................................................................................................................................................................................................................CAACAAC-------------------------------------------------------------------------------------AGCAACAGCAGCAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100010
...................................................................................................................................................................................................................................................................................................................CAGCAGCAACAATGGCAGCAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
.............................................................................................................................................................................................................TGCAGCAACAAC-------------------------------------------------------------------------------------AGCAACAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
....................AACAACAGCAACAACAACTGCAG--------------------------------------------------------------------------------------------------------------------------------------------------------CA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
.....GGC-----AGCAA-CAACAACAGCAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
...............................CAACAACTGCAG--------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAACAATTGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05101000
.............................................................................................................................................................................................................................................................................................................................AATGGCAGCAACAACAACAG-----------------C..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
............................................................................................................................................................................................................TTGCAGCAACAAC-------------------------------------------------------------------------------------AGCAACAGCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
.............................AACAACAACTGCAG--------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
............................................................................................................................................................................................................TTGCAGCAACAAC-------------------------------------------------------------------------------------AGCAACAGCAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
dp5
ACAGCAGC-----AACAG-A-GCAACAC-G----CTGCCGCTGAAA-------AAGTCAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTTAAAAGGACAA-----AA--------GCAACCAAAGCAGCT---------GCCAATATTGCAACAACAGCAA---------------------------------------------------CTTCAGCAACAACAACAACTGCAACTTCA------------------ACAACAACAGCAACAACAAC------A------ACAGCAACAACAACAGCAACTGCAACT----------------T------------------CAGCAAC------------A--------------------------ACAACAACAA----------------------------------------CA----CCA---------ACAAGCAGCGCCCCGCAATGCG-AATGTACAACCA------------------GAACATCAAC-AAAACCA-----------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCAGCAACAACAACAACTGCAACCC.....................................................................................................................................................................................................................................................................................................................................................2711.0010010000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAGCAACTGCAACT----------------T------------------CAGCAAC------------...............................................................................................................................................................................................................2911.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACTGCAACT----------------T------------------CAGCAAC------------...............................................................................................................................................................................................................2211.0010000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGCG-AATGTACAACCA------------------GA.........................................................2011.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCG-AATGTACAACCA------------------GAAC.......................................................2011.0010010000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAGCAACTGCAACT----------------T------------------CAGC..............................................................................................................................................................................................................................2711.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................CAACCAAAGCAGCT---------GCCAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCGCCCCGCAATGCG-AATGTACAAC...............................................................................2711.0010010000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACTGCAACT----------------T------------------CAGCAAC------------...............................................................................................................................................................................................................2411.0010010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCA------------------ACAACAACAGCAACAACA...............................................................................................................................................................................................................................................................................................................2140.5020200000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGCAACAACAAC------A------ACA.............................................................................................................................................................................................................................................................................................22200.3060005001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCA------------------ACAACAACAGCAACAAC................................................................................................................................................................................................................................................................................................................2040.2510100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------------------ACAACAACAGCAACAACAAC------A------ACAGCA..........................................................................................................................................................................................................................................................................................2940.2510010000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAACAACAGCAACT...........................................................................................................................................................................................................................................................................2050.2010001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAGCAACAACAAC------A------AC..............................................................................................................................................................................................................................................................................................20200.1530300000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAACAACAACTGC..........................................................................................................................................................................................................................................................................................................................................................1980.1310100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC------------A--------------------------ACAACAACAA----------------------------------------CA----CCA---------ACA.............................................................................................................23150.0710100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAACAAC------A------ACAGCAACA.......................................................................................................................................................................................................................................................................................23200.0510100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------ACAACAACAGCAACAACAAC------A------AC..............................................................................................................................................................................................................................................................................................24200.0510100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGCAACAACAAC------A------ACA.............................................................................................................................................................................................................................................................................................23200.0510001000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC------------A--------------------------ACAACAACAA----------------------------------------CA----CCA---------A...............................................................................................................21200.0510100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACAAC------A------ACAGCAACAA......................................................................................................................................................................................................................................................................................22200.0510100000000
droPer2
GCCGCCAC-----GGCACCCAGCAGCAGTGCAGCGCGAC-------GCGGAGCCAGGCAGAGTGCG-----------------------------------------------------------------------------------------C------------AGCAG----------------------CAACAGCAGCAGCAACAAC---AG------------------------------------------------------CAG---CAGCAACAGCAGCAGCAACAACA-------------------------------GC-------------------------------------A---------------GCAGC---------ATCATCAAGCGCAGCAGCAACAAC---A---------------------------------------------------ACAGCAGCA------------------GAGGCA---------GGTGTACCAGCAGCA---GCAGCAAC---------------AGTTGCGTCAGCAGCACCAA-CAAAT------------------------GTCG-----CAGATGTCGC----------------------------------------------------AGCAGGCGCACT--------------------------------------------------ATCCC------------------GTGCAGCAGC-AGCAACA-----------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...............................................................................................................................................................................................................................................................................................GCAGCAGCAACAACA-------------------------------GC-------------------------------------A---------------GCAGC---------ATC........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCACT--------------------------------------------------ATCCC------------------GTGCAGCAGC-A...............................................2211.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT------------------------GTCG-----CAGATGTCGC----------------------------------------------------AGCAGGC.........................................................................................................................................2311.001001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT------------------------GTCG-----CAGATGTCGC----------------------------------------------------AGCA............................................................................................................................................2011.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAC---------------AGTTGCGTCAGCAGC..........................................................................................................................................................................................................................................................2111.001010000
...................................................................................................................................................................................................................AAC---AG------------------------------------------------------CAG---CAGCAACAGCAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.153003000
...................................................................................................................................................................................................................AAC---AG------------------------------------------------------CAG---CAGCAACAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.102002000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCAGCAGCA---GCAGCAAC---------------A........................................................................................................................................................................................................................................................................20100.101010000
..............................................................................................................................................................................................................GCAACAAC---AG------------------------------------------------------CAG---CAGCAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051001000
..................................................................................................................................................................................................................CAAC---AG------------------------------------------------------CAG---CAGCAACAGCAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051001000
................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAAC---A---------------------------------------------------ACAGCAGC....................................................................................................................................................................................................................................................................................................................................................19200.051100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAGCAGCA---GCAGCAAC---------------AG.......................................................................................................................................................................................................................................................................20200.051010000
.....................................................................................................................................................................................................ACAGCAGCAGCAACAAC---A...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051010000
droAna3
TCCGGCGCTTAGTGGCGG-CAGCAGCAGCATAG-----------------A---------------------------------------------------------------------------------TTTTGGAGA------------------------------------------------------CA-TGGC-TCATGGACTGCGACAG------------------------------------------------------CAG---AAGCAGCAGCTACAACAGC----AACAACAACAGCAACAACAACAGCAACA----------------------------------------------------------------TTTCTACCAGCAACAGATAC---------------A---ACAACAACAACAAC---------------------------------AACAACAACA------------------GCAGCAGCAGCAACAGCAAC------------------------AGCAAC------AACA------------TCAT-CATCA------------------------G------------------CTGCTAGCCACCGGCGGCAACAA------------------------------------------------------------------------------------------------------------------C---AGCAGC-AGCAGCA-----------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................................................................................................................................................................GACAG------------------------------------------------------CAG---AAGCAGCAGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
.......CTTAGTGGCGG-CAGCAGCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
...............................AG-----------------A---------------------------------------------------------------------------------TTTTGGAGA------------------------------------------------------CA-TGGC-TC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
.........................................................................................................................................................................................................................................................................................................................CAACAACAACAGCAACA----------------------------------------------------------------TTTCTACCAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC------------------------AGCAAC------AACA------------TCAT-CATCA------------------------G------------------C...................................................................................................................................................................................................2511.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................CAGATAC---------------A---ACAACAACAACAAC---------------------------------AACAAC.......................................................................................................................................................................................................................................................................................................................................................2811.001010000
................................................................................................................................................................................................................................................................................................................................AACAGCAACA----------------------------------------------------------------TTTCTACCAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
............................CATAG-----------------A---------------------------------------------------------------------------------TTTTGGAGA------------------------------------------------------CA-TGGC-T.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAT-CATCA------------------------G------------------CTGCTAGCCACCGGC.....................................................................................................................................................................................2411.001100000
................................G-----------------A---------------------------------------------------------------------------------TTTTGGAGA------------------------------------------------------CA-TGGC-T.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAA------------------------------------------------------------------------------------------------------------------C---AGCAGC-AGCAGCA-----------------------------------------19200.204000004
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA------------------GCAGCAGCAGCAACAGC................................................................................................................................................................................................................................................................................................................21200.153021000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAA------------------------------------------------------------------------------------------------------------------C---AGCAGC-AGCAGC..........................................20200.153021000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC---------------------------------AACAACAACA------------------GCAGCAGC.........................................................................................................................................................................................................................................................................................................................21200.153030000
......................................................................................................................................................................................................................................................................................................CAGC----AACAACAACAGCAACAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21100.101000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC---------------------------------AACAACAACA------------------GCAGC............................................................................................................................................................................................................................................................................................................................19200.102020000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA------------------GCAGCAGCAGCAACAGC................................................................................................................................................................................................................................................................................................................22200.102020000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................C---------------------------------AACAACAACA------------------GCAGCAGCAGC......................................................................................................................................................................................................................................................................................................................22200.102010001
................................................................................................................................................................................................................................................................................................................CAACAACAGCAACAACAACAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22130.081010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAC---------------------------------AACAACAACA------------------GCAGCAGCAGC......................................................................................................................................................................................................................................................................................................................27190.051100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAAC---------------------------------AACAACAACA------------------GCAGCAGC.........................................................................................................................................................................................................................................................................................................................27190.051010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACA------------------GCAGCAGCAG.......................................................................................................................................................................................................................................................................................................................20200.051000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAC---------------------------------AACAACAACA------------------GCAGCAGC.........................................................................................................................................................................................................................................................................................................................24200.051010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACA------------------GCAGCAGCAGCAACA..................................................................................................................................................................................................................................................................................................................21200.051000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAC---------------------------------AACAACAACA------------------GCAGCAGC.........................................................................................................................................................................................................................................................................................................................23200.051000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAGCAAC------------------------AGCA.................................................................................................................................................................................................................................................................................19200.051001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACA------------------GCAGCAGCAGCAAC...................................................................................................................................................................................................................................................................................................................21200.051000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAACAGCAAC------------------------AGC..................................................................................................................................................................................................................................................................................22200.051010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGCAAC------------------------AGCAAC------AAC......................................................................................................................................................................................................................................................................22200.051010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAA------------------------------------------------------------------------------------------------------------------C---AGCAGC-AGCAGCA-----------------------------------------18200.051010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................AC---------------------------------AACAACAACA------------------GCAGCAGCAGCA.....................................................................................................................................................................................................................................................................................................................24200.051000001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA------------------GCAGCAGCAGCAACAGCAA..............................................................................................................................................................................................................................................................................................................22200.051100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAAC---------------------------------AACAACAACA------------------GC...............................................................................................................................................................................................................................................................................................................................19200.051010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACA------------------GCAGCAGCAGCAACA..................................................................................................................................................................................................................................................................................................................24200.051000001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAAC------------------------AGCAAC------AA.......................................................................................................................................................................................................................................................................18200.051001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACA------------------GCAGCAGCAGCAACA..................................................................................................................................................................................................................................................................................................................22200.051100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAGCAAC------------------------AGCAAC------.........................................................................................................................................................................................................................................................................21200.051010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACA------------------GCAGCAGCAGC......................................................................................................................................................................................................................................................................................................................20200.051010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA------------------GCAGCAGCAGCAACAGCAAC------------------------A....................................................................................................................................................................................................................................................................................24200.051010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACA------------------GCAGCAGCAGCA.....................................................................................................................................................................................................................................................................................................................22200.051000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................AC---------------------------------AACAACAACA------------------GCAGCAGCAGC......................................................................................................................................................................................................................................................................................................................23200.051010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAGCAAC------------------------AGCAAC------.........................................................................................................................................................................................................................................................................20200.051010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAC---------------------------------AACAACAACA------------------GCAGCAGCAGC......................................................................................................................................................................................................................................................................................................................26200.051010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAACAAC---------------------------------AACAACAACA------------------GC...............................................................................................................................................................................................................................................................................................................................26200.051010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................C---------------------------------AACAACAACA------------------GCAGCAGCAGCAAC...................................................................................................................................................................................................................................................................................................................25200.051010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAC---------------------------------AACAACAACA------------------GCAGC............................................................................................................................................................................................................................................................................................................................21200.051010000
droBip1
CCAGCAGG-----AGCAG-CAGCAGCAGTTGCAACACATGCAGGCCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------ACT-------------------------------------------------------------------------------------ATCTGCAGGAACAACAGCAGCAGGAGTTGCACAAGTTGCAAGAGCAG-----CA--------CAAA---CAGCAGCA---------GCAGCAGATGCTACAGCAGCA---------------CC---A---------------------------------------------------------------------------------------GCATCAGCAGC------A------GCAATTGTTGCAACAGCAACGGCAACAGCAACAGCAGCAGCAA-CAC-----------------------------------TTGATGCAAC---------AGCA---GC------TT-------------AATCA------GCA---------TCTCC-------------------A-GCAGCC---------AAT-------------------------------C---ATCAACATGCAACA-----------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
TTTACAGC-----AGCAG-CAACAACAGCATCTACAGCAGCAG--------------------------------------------------------------------------------------------------------------------------------------------------------CAACAACAGCATTTACAGCAGC-------------------------------------------------------------------------------------AGCAGCAGCAGCATTTACAGCAGCAGCAGCAACAG-----------------CA--------TCT------------ACAGCAGCAGCAGCAACATCACCAGCAGCA------A---------CAACA---------------------------------------------------------ACA------------------GCATCTACAGCAGCAACAGC---AGCAGCTGCAGCAACATCTACAGCAGC------AACA----------------G------------------CAGCAGC------------A--------------------------TCA---------TC-------------T------ACA-------------------------GCA---GCA-GCAGCA---------T---------------------------------C---TACAGC-AACAGCA-----------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
GCCACAGC-----AGCAG-CAGCAGCGAT--------CCACTGAAAGCCCCTTCCGAT---TTGCACAGCAGCAACAGCA-------ACAGTCGCCGC-----------------------------------------------------------------------------------------------------AGC--------A---ACG-------------------------------------------------------------------------------------GCCGCCAACAGCAATATCGCCGCTGGC-------TCA-------------------------GCA------------GCA------------------------GCAA---------------------------------------------------CTTCAACAGCAACAGCAACTTCAACAGCA------------------ACAGCAGCAGTTGCAGCAAT---------------------------TGCAGCTGCAACA----------------TCAGCAGCTTCAGC------AA--------------------------------------CAGCAGCAACAA------------------------------------------------------------------------------------------------------------------C---TGCAGC-AGCAACA-----------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
CC-GCAAC-----ATCAA-TACCAACAACA-------------------------------------------------------------------------------------------------------------------CCAAATATTAC------------ACCAA----------------------CAACAACAATTGCCAAATCACC-------------------------------------------------------------------------------------ACCATCATCATCATCATCACCACCACCATCACAGTCA-------------------------ACT------------ACAACTCCAACAACAACAACAGCAACATCA------------------------------------------------------------------------ACTACAACA------------------GCAGCAACACCAACAACAAC---AGCC------GCTACACCAACAACAGCAATTGCAACA----------------C------------------CAGCAGC------------A--------------------------ACA---------CC-------------A------ACA-------------------------ACACTATCA----ACA---------ACAT-GC--------C------------------C---TTCAAC-AACAACA-----------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
GTCCCAGC-----AGCAG-CAGCAACTCTGCCACTAG-------------------------------------------------------------------------------------------------------------------CAACACC---------AGTAG----------------------CAGTAGCAATAGCTATGCCAAC-------------------------------------------------------------------------------------AGTCCGCTCAGCCCGCTCACACCCACTCCCACGGCAA-------------------------CTG------------CCA---------GCAATCCCA-----------------------GT------------------------------------------CATCAGCAGCAACACCAGCAGCA------------------GCAGCAACACAACCAGCAGC------A------GCAGCAGCAACAACACAACCAGCAACA----------------T------------------CAGCAGC------------A--------------------------GCA-------------------------------ACA---------TCACCC----------------TCA----GCA---------CCA-------------------------------C---GACAAC-AGCAATA-----------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
AGCGGCGC-------CAG-ACGCTCCACCTTATCCAGTCGCTGGCCGCCCAGGT---------GCT------------------------------------------CTTCAACAAGCAGGAGAAGCAACA-------------GCAGGAGCAGT------------ACCAA----------------------CAGCAACAGCAGCAGCATCATC-------------------------------------------------------------------------------------ATCATCATCAGCAGCA-------------------------------------------------------------------------------------------------G---------C---A---GCAGCAGCAGCAGCAGCAGCAACAGCAACACCAGCAGCATCAGCAGCAGCAACACCA------------------GCAGCAACGTCAGCAACAGT------T------CCTGGACCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------------------G---CGCAGC-AGCAACA-----------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
ACAGCAGC-----AGTCG-CCGCAGCAACGTCCACC--AACAGCA-----A---------------------------------------------------------------------------------TTTCGCCGCTGGCTC---AGGTGC------------AACAG----------------------CAGCAGCAACAGCAATATCAGC-------------------------------------------------------------------------------------AGCAGTTACAGCA-------------------------------------------------GCAACAACTGCAGCA---------GCAACAATTGCAACAGCAACAG---------------C---TACAGCAGCAGCAACTGC---------------------------------AGCAGCAACA------------------ACTACAGCAGCAACAACTAC------A------GCAGCAACAATTACAGCAGCAGCAACT----------------A------------------CAGCAGC---------------------------------------------------------------------------A---------ACAGT--------------------------T---------G---------------------------------C---AACAGC-AACAACA-----------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
ACAGCAGC-----AGCAG-CAATTGCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACAAC---TG------------------------------------------------------CAG---CAGCAACAGCTGCAACAGCAACA-------------------------------AT-------------------------------------TGCAGCAGCA------------------------ACAATTGCAACAGCAAAAAC---T---ACAGCAACAACAAT------------------------------------T------------------------GCAGCAACAGCAACA------------------GCAGCTAC---------------AGCAGCAGCAACAGCAACTT-CAACA------------------------GCAGCAGCA--------------------------GCAACAGCAACAACAGGC------------------A-------------------------GCTCAGTCA----GTA---------CCAT-GG--------CGCACTCAACGCACGCAGCC---TGCAGC--ACAACA-----------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
GCGGCCGC-----TGCCG-CCGCAC---------------------GCGAATCCCTGCTGAAT-----------------------------------------------------------------------------------------TCATATCTTTATCAAAA----GGATAGCGATGCCGGCAATTAT--ATGGC-GGAGCAGAGCTACT-------------------------------------------------------------------------------------GGCAACAGCACCAGCAACATCACCACCAACAGCAGCA-------------------------GCA------------GCA------------------------GCAG---------------------------------------------------CATCAACAACAACAGCAGCAGCAACATCA---------------ACAGCAGCAACATCAGCAGCAGC------A------GCAACACCAACAACAGCAAC------A----------------C------------CAACAGCAGCAACAGCAACA--------------------------------GAAGCAG------------------------------------------------------------------------------------------------------------------C---TCCAGC-AGCAGCA-----------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................................................................................................GGATAGCGATGCCGGCAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................TAT--ATGGC-GGAGCAGAGCTACT-------------------------------------------------------------------------------------GGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000001000000
.....................................................................................................................................................................AAAA----GGATAGCGATGCCGGCAATTAT--........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................ATGGC-GGAGCAGAGCTACT-------------------------------------------------------------------------------------GGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAACAGCAACA--------------------------------GAAGCAG------------------------------------------------------------------------------------------------------------------C---.......................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000
....................................................................................................................................................................CAAAA----GGATAGCGATGCCGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000010
..............................................................................................................................................................................................ATTAT--ATGGC-GGAGCAGAGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000001000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGC------A------GCAACACCAACAAC..................................................................................................................................................................................................................................................................................2422.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................GAATCCCTGCTGAAT-----------------------------------------------------------------------------------------TCATAT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................GCAGAGCTACT-------------------------------------------------------------------------------------GGCAACAGCACCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAGCAAC------A----------------C------------CAACAGCAG...............................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................GAGCTACT-------------------------------------------------------------------------------------GGCAACAGCACCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................AAAA----GGATAGCGATGCCGGCAATT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACA--------------------------------GAAGCAG------------------------------------------------------------------------------------------------------------------C---TCCAGC-A...............................................2312.0020000000000000000000000000000000000000010000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................AG---------------------------------------------------CATCAACAACAACAGCAGC.............................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................CTTTATCAAAA----GGATAGCGATGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................TATCTTTATCAAAA----GGATAGCGAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................TATCAAAA----GGATAGCGATGCCGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................AATTAT--ATGGC-GGAGCAGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACA--------------------------------GAAGCAG------------------------------------------------------------------------------------------------------------------C---TCCAGC-................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAACA--------------------------------GAAGCAG------------------------------------------------------------------------------------------------------------------C---TCCA...................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................CGGCAATTAT--ATGGC-GGAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
................................................................................................................................................................................................TAT--ATGGC-GGAGCAGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................TAT--ATGGC-GGAGCAGAGCTACT-------------------------------------------------------------------------------------GG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................CA------------------------GCAG---------------------------------------------------CATCAACAACAACAGC................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......GC-----TGCCG-CCGCAC---------------------GCGAATCCCTGCTGAAT-----------------------------------------------------------------------------------------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAACAGCAACA--------------------------------GAAGCAG------------------------------------------------------------------------------------------------------------------...........................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACA--------------------------------GAAGCAG------------------------------------------------------------------------------------------------------------------C---TCCAGC-AGCAGCA-----------------------------------------2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACA--------------------------------GAAGCAG------------------------------------------------------------------------------------------------------------------C---TCCA...................................................2011.0010000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................GAGCTACT-------------------------------------------------------------------------------------GGCAACAGCACCAGCAACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC------A------GCAACACCAACAACAGCAAC------A----------------C------------CA......................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGCAACA--------------------------------GAAGCAG------------------------------------------------------------------------------------------------------------------C---TCC....................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................CA------------------------GCAG---------------------------------------------------CATCAACAACAACAGCAGCAG...........................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAGCAGCAGCAACATCA---------------ACAGC...............................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................CTTTATCAAAA----GGATAGCGATGCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
..............................................................................................................................................................................................ATTAT--ATGGC-GGAGCAGAGCTAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................TAGCGATGCCGGCAATTAT--AT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA--------------------------------GAAGCAG------------------------------------------------------------------------------------------------------------------C---TCCAGC-AGC.............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGCAAC------A----------------C------------CAACAGC.................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................TAGCGATGCCGGCAATTAT--ATGGC-GGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................A----GGATAGCGATGCCGGCAATTAT--A.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGCAACA--------------------------------GAAGCAG------------------------------------------------------------------------------------------------------------------...........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................TTAT--ATGGC-GGAGCAGAGCTACT-------------------------------------------------------------------------------------GGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................CA------------GCA------------------------GCAG---------------------------------------------------CATCAACAACAACAGC................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................TTAT--ATGGC-GGAGCAGAGCTACT-------------------------------------------------------------------------------------GGCAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................T--ATGGC-GGAGCAGAGCTACT-------------------------------------------------------------------------------------GGCAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA--------------------------------GAAGCAG------------------------------------------------------------------------------------------------------------------C---TCCAGC-AGCAGCA-----------------------------------------2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
................................................................................................................................................................................................TAT--ATGGC-GGAGCAGAGCTACT-------------------------------------------------------------------------------------GGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..............................................................................................................................................................................................................GCAGAGCTACT-------------------------------------------------------------------------------------GGCAACAGCAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................GGC-GGAGCAGAGCTACT-------------------------------------------------------------------------------------GGCAACAGCACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................AT--ATGGC-GGAGCAGAGCTACT-------------------------------------------------------------------------------------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................CA------------------------GCAG---------------------------------------------------CATCAACAACAACAGCAG..............................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................G---------------------------------------------------CATCAACAACAACAGCAGCAGCA.........................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................TTAT--ATGGC-GGAGCAGAGCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
......................................................................................................................................................................AAA----GGATAGCGATGCCGGCAATT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
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droSim2
CC-GCAAC-----ATCAA-TACCAACAACA-------------------------------------------------------------------------------------------------------------------CCAAATATTAC------------ACCAA----------------------CAACAACAATTGCCAAATCACC-------------------------------------------------------------------------------------ACCATCATCACCATCACCACCACCACCATCACAGTCA-------------------------GCT------------ACA------------------------ACAA---------------------------------------------------CTCCAACAACAACAGCAACAACAACAACA------------------GCAGCAACACCAACAACAGC------C------GCTACACCAACAACAGCAACTGCAACA----------------C------------------CAGCAGC------------A--------------------------GCAACAA------------------------------------------------------------------------------------------------------------------C---ACCACC-AACAACA-----------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGC------C------GCTACACCAACAA...................................................................................................................................................................................................................................................................................1811.00100001000000000000
droSec2
CC-GCAAC-----ATCAA-TACCAACAACA-------------------------------------------------------------------------------------------------------------------CCAAATATTAC------------ACCAA----------------------CAACAACAATTGCCAAATCACC-------------------------------------------------------------------------------------ACCATCATCACCATCACCACCACCACCATCACAGTCA-------------------------GCT------------ACA------------------------ACAA---------------------------------------------------CTCCAACAACAACAGCAACAACAACAACA------------------GCAGCAACACCAACAACAGC------C------GCTACACCAACAACAGCAACTGCAACA----------------C------------------CAGCAGC------------A--------------------------GCAACAACAC----------------------------------------CA----CCAACAACACTATCA----GCA---------ACAT-GC--------C------------------A---T-------TCAACA-----------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAACA------------------GCAGCAAC.........................................................................................................................................................................................................................................................................................................................22120.0810100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------------C------------------CAGCAGC------------A--------------------------GCAACAACA...........................................................................................................................................................................19200.0510010
droYak3
ACCGCCCC-----GGCAG-CAACAGCAGCAGCACCAACAACAACA-------------------------------------------------------------------------------------------------------AGCATT------------------------------------------------CGC-GTC---GCA------------------------------------------------------------G---CAGCGCCGGCAGCAACAATAACA-------------------------------A--ATAGCAAAAACTGAGCAGCGTTCGGCAAAGCG---CAGCAACA---------GCA---------------ACAAAGGCAACACTAAAACT---A---------------------------------------------------------ACA------------------GCAGCGACACCAATTGCTAC------T------GCAACACCAGCAGCAGAAAC---AAC--------------------------------------------------------CAAGC--GG-CGGCAAGTCAGCAGCAGCAACAA------------------------------------------------------------------------------------------------------------------C---AACAAC-AGCAGCA-----------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................................................................................................................................................................................................................A------------------------------------------------------------G---CAGCGCCGGCAGCAACAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.50100000100000
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droEre2
ATCATCAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACCATCACCACCATCACAGTCA-------------------------GCT------------ACA------------------------ACAA---------------------------------------------------CTCCAACAACAACAGCAACAACAACAACAGCAGCAACACCAACAACAACAGCAACACCAACAACAGC------C------GCTACACCAACAACAGCAACTGCAACA----------------C------------------CAGCAGCAGCAACA--------------------------------AC---AACAC----------------------------------------CA----CCAACAACACTATCA----GCA---------ACAT-GC--------C------------------A---TTCAAC-AACAGCAGGCTAGCAAAATCTCATATCGTGGCATTTTCACCACCACAGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAGCAGCAACACC........................................................................................................................................................................................................................................................................................................................................2140.2510001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGCAGCAACACC........................................................................................................................................................................................................................................................................................................................................1950.2010001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGCAACAACAACAACA...................................................................................................................................................................................................................................................................................................................................................22170.1830201000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAACAACAGCAGC..............................................................................................................................................................................................................................................................................................................................................21200.0510100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGCAACAACAACAAC....................................................................................................................................................................................................................................................................................................................................................21200.0510100000

Generated: 05/18/2015 at 02:46 AM