ID:

dmo_2511

 Coordinate:

scaffold_6680:16477444-16477491 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-5.0 -5.0 -4.6

Flybase annnotation

intron [Dmoj\GI13600-in]; exon [dmoj_GLEANR_13514:3]; exon [dmoj_GLEANR_13514:4]; CDS [Dmoj\GI13600-cds]; CDS [Dmoj\GI13600-cds]

Repeatable elements

NameClassFamilyStrand
TART_DVLINEJockey+

Sense Strand Reads

##################################################------------------------------------------------##################################################
CGCAGCCGCCTGCCAAGCCGCCCAGGACATCGCTAGCTTGCACTTTGAGCGTGCCCAGCCGGCCAACCCCGCAACAGCAACAACAGCAACAGCAACAGCAGCAGCAACAGCAACAGTTGCCGCTGCAACAGAGCTTCCTCGCCGATCA
**************************************************.(((.....(((......))).....)))...................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body		 V041
embryo
 V049
head
 V056
head
...................................................TGCCCAGCCGGCCAACCCCGC............................................................................ 21 0 1 1.00 1 1 0 0 0 0 0
......................................................................................................................GCCGCTGCAACAGAGCTTCCT......... 21 0 1 1.00 1 0 0 1 0 0 0
...............................GCTAGCTTGCACTTTGAGCGTGCCCA........................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0
................................................................................................................ACAGTTGCCGCTGCAACAGAGCTTCC.......... 26 0 1 1.00 1 0 1 0 0 0 0
........................GGACATCGCTAGCTTGCACTTTGAGCGT................................................................................................ 28 0 1 1.00 1 1 0 0 0 0 0
.......................................GCACTTTGAGCGTGCCCAGCCGGC..................................................................................... 24 0 1 1.00 1 1 0 0 0 0 0
...............................GCTAGCTTGCACTTTGAGCGT................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0
....................................................................CCGCAACAGCAACAACAGCA............................................................ 20 0 2 0.50 1 0 0 0 1 0 0
................................................GCGGGCCCACCCGGCCACCCCC.............................................................................. 22 3 2 0.50 1 0 0 0 0 1 0
........................................................................................................CAACAGCAACAGTTGCCGCT........................ 20 0 3 0.33 1 1 0 0 0 0 0
.........................................................................................................AACAGCAACAGTTGCCGCTG....................... 20 0 3 0.33 1 1 0 0 0 0 0
.........................................................................................................AACAGCAACAGTTGCCGCT........................ 19 0 3 0.33 1 0 0 0 0 0 1
...............................................................................................CAGCAGCAGCAACAGCAACAGTTG............................. 24 0 13 0.08 1 1 0 0 0 0 0
..................................................................................ACAGCAACAGCAACAGCAGCAGCA.......................................... 24 0 20 0.05 1 0 1 0 0 0 0
................................................................................CAACAGCAACAGCAACAGCAGCA............................................. 23 0 20 0.05 1 1 0 0 0 0 0

Anti-sense strand reads

GCGTCGGCGGACGGTTCGGCGGGTCCTGTAGCGATCGAACGTGAAACTCGCACGGGTCGGCCGGTTGGGGCGTTGTCGTTGTTGTCGTTGTCGTTGTCGTCGTCGTTGTCGTTGTCAACGGCGACGTTGTCTCGAAGGAGCGGCTAGT
**************************************************.(((.....(((......))).....)))...................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
.......................................................................................................................GGCGATCTTGTCCCGAAGG.......... 19 3 9 0.22 2 2
.....................................................................................................................AGGGCGACGTTGTCCCGA............. 18 2 5 0.20 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6680:16477394-16477541 + dmo_2511 CGCAGCCGC-CTGCCAA-------------------GCC---------GCCCAG-------------------------------GAC------ATCGCTAGCTTGCA------CTTT---------------------------------G-------AGCGTGCCCA---------------GCCGGC-------C---AA----CCCCGCAACAG------------CAACAACAGC------AACAGCAACAGCAGCAGCAACA------------GC---------AACA------------GTTGCCGCT----------------GC---AACAGAGCTTCCTCGCCGATCA--
droVir3 scaffold_13246:1794677-1794820 - A-CAGCAGC-CTGGC-AA---C------------------------------------GGCCTCGAGCGC------------------------CTCGCTTGCG---------------CCCAAATCGAGCAGC---------ACC---AATCACACTG--------------------C------CACGCCAGC--A---AC------------CAAC------------------ACC------AACACCAACAGCAGCAGCA---------------GCAGCGATGCCGGCA------------GCGG----------------------CA---A---GGCCAGCTCGCCCAACA--
droGri2 scaffold_14906:1820091-1820244 + CGTTGGCGA-GTCCAA-----------C-A-------TC---------GCCGTC-----------------------GG------CAC------------TGCT-------------------------GCTGGCACACCAGCAAC---ACC-------------------------------TGCTGGCC------C---AA---------CACCAAC---------AGCACCAGCAAC------A------ACAGCAGCAGCA---------------GCAGCAACAGCAGCA------------GCAGGCTTT------GCACTTGGCTGCA---GTGCATCCTG-CACCGCATCA--
droWil2 scf2_1100000004822:2704398-2704555 + TGCAGCCATCCACAT---------CCAAATCTAC-------A--------TCCACATCCAGCTCCAGCTCCTTGCC-----G-----------------TTGCA---------------TGT-------GC------AGCACCA--------------------------A--------C------AGC------------------AGCAGCAACAACAACAGC------------AGC------AACATCAACAGCAGCAGCAGCA------------GC---------AGCA------------CCAGCACCAGCAACGAA-------TG-----------CGACAACGATGATGA--
dp5 4_group1:4366311-4366446 + dps_1414 CGCAACCGCCAGTGGCAACAA---C----ACAACAA----------------------------------------------------------C-----AGC-------------------------AGCAAC---------AAC---AAG-------------------------------TGCAGCAGCAGCACC---AA---------------C------AGCAGCAGCAGCAAC------A---ACAACAACAGCAGCA---------------GCAGCAACAACAGCA------------GCAG----------------------CAACAGCAA---TCGCTCAATGACCA--
droPer2 scaffold_5:843954-844092 - CGCAACCGCCAGTGGCAACAA---C----ACAACAA----------------------------------------------------------C-----AGC-------------------------AGCAAC---------AAC---AAG-------------------------------TGCAGCAGCAGCACC---AA---------------C------AGCAGCAGCAGCAAC------A---ACAACAGCAGCAGCA------------A------CAACAACAGCA------------ACAACAGCA----------------GCAACAGCAA---TCGCTCAATGACCA--
droAna3 scaffold_13266:4353793-4353918 + CGCAGCAGC-AGCAA-----G---C----GCTGC---------------------------------------------AGCA------------------A----------------------------------CACCACCAGC---ACC-------------------------------TCCAGCAGCAGCACC---AGCAACAGCAGCAACAACAACAGC------------AGC------AACAGCAACAGCAGCAGCAACA------------AC---------AACA------------ACAGCAGCA----------------GC---AGCAG----------------A--
droBip1 scf7180000395898:42981-43121 + G-CGGCCGT-GCCAC------CGA---C------------------------------GAGGGCCAGTACCTT--------------------------------------------------------GTTGC---------------ACT-----------CACCCA--CCGAA---GAGGTG---------------------------CAACAACAG---------CAACAGCAAC------AGCA---GCAGCAGCAGCA------------GCAAC------AGCAACAGTTGCA------TGCC---TC------GT-------CGCG---AAGG--GCTTACCACCAACAG--
droKik1 scf7180000302382:357994-358131 + GGCAGCCGC-AGCAGCATCAG---C----GCCTCGT---------------------------------------------------------------TTGCT-------------------------GCTGC---------AAC---TGG--------------AC--GCAGTG---GCTGTC------------C---AG---------------C------AGCAGCAACAGCAAC------AACA---GCAGCAGCA------------------GCAACAACACCAGCA------------GCAGCAACA----------------GC---AACAAATCGCTGCCGCTGGCAA--
droFic1 scf7180000453925:690303-690447 + AGCAGCAGC-TCTTC---------------------GCC---------GCCCAGC-------A------G-----TTGCAGCT------------------G----------------------------------CACCACCAGC---AAC-------------------------------TGCAGCAGCAG------------------CAACAAC------------------AGC------AGCAGCAACAGCAGCAGCAACA------GCAGCAGCAGCAACAACAGCA------------GCAGCAGCA----------------GCA---GTACAGCTACTACTTCAGTCG--
droEle1 scf7180000491046:566261-566407 + AGCAATGCG-AACAACAACAA---C----GCACTGG--T--GACCGCCACCCAGC-------A------G-----C-----------------------------------------------------------------------------------------------------------TGCAGCAGCTCCAGCAGCAA---CAACAGCAGCAG------------CAACAGCAGC------AGCAGCAACAGCAGCAGCAGCA------------AC---------AACA------------GCAGCAACA----------------GC---AACAACTCCT----GGTGGCCGGT
droRho1 scf7180000779999:262090-262239 - CAA--GCACCT-G-GCAG---CTGC----CCAGCA----------------------------------G------------------------C-----AT---GCA------CTTA-GCCAGGCCCAGCAGC---------AAC---ATGCCCATCA------------C-CAA---GCCCAC------------C---AG---------------C------AGCAGCAACACCAACAACAGCAACACCAACAGCATCAGCA---------------------------ACA------------GCAGCAGCA----------------GC---AGCAT---ATCCATGCCCAGCA--
droBia1 scf7180000302069:408295-408431 + GGCAGCGGC-AGCAGCAG-------------------CC---------GCCCAGC-------A------G-----CAACAGCA------------------A----------------------------------CACCAGCAAC---ACC-------------------------------AGCAACAGCAGCTCC---AG---------------C------------AAC---AGC------A------GCACCAGCAACA---GCAGCAGCACCAGCAGCAGCACCAGCA------------GCAG---CA----------------GC---AACAG-------TCGCAGGTCA--
droTak1 scf7180000415769:1930031-1930181 - AAGAGCTGC-GACAA---------------------TTT---------GGCC-------------------------AG------GAC------------TTCCAGCT------------------------GG---CCC-CCAACAACACT-TCACC--------------------GC------CAC------------------AGCAGCAACCACAGCAG------C------AGC------AGCAGCAAGTGCAGCAGCA------------ACAGCAGCAGCAACAGCG------------AGCC---TT------GC-------AGCA---GTCTGCCTCGCCCCCGCAACA--
droEug1 scf7180000409804:2432533-2432662 + CTCAGCCGC-GGCAA------CATC----CCAAGA---------------------------A-------------------------------G-----CGA---AA------GTTCGATCCAGCCGAGCTGG---------ACA---AAA-------------------------------CGGAGC------------------------------------------------AGC------ATCCCCAACAGCAGCAGCAACA---------ACAACAACTGAGTCTGCA------------AAAGCA-------------------GCA---G------AAACCCGCCGATAC--
dm3 chr3R:27053156-27053307 + AGTGGCCTC-GTTGT------CCA---A--------------------------G----AAGACC-----------------------A----A--------CATACT---------------------GCTAC---------TAC---AGG-------AGCCAACCCA------GTTGG---TGCAGCAG---------------------GTACAGCAGCAG------C------AGC------AGCAGCAACAGCAGCAGCA------------ACAGCAACTGCAGCAGCA------------GGTGCAGCA----------------GCA---ACACCACGTT-CTGCCCATCA--
droSim2 x:10052414-10052568 + TGCTGTCGC-CATCTCC-------------------GCC---------GCTCAAC-------G------A-----TCAG------ATCA----G--------CTTGCTATTC-------CC------------------------C---AAG-------TGCCGACCCAAA--CA---GC------AGC------------------AGCAGCAGCAGCAGCAG------C------AGC------AGCAGCAGCAGCAGCAGCA------------ACAGC---------AGCA---GCAGCAACAGCAA---CA------GC-------AGCA---A--------CTTCAACCAGCA--
droSec2 scaffold_0:14752210-14752358 - CGCCGCG-C-ACCGTCA-------------------GCCGCA--------TCCTT-------G------C-----CCAG------GATG----G--------CGTGGTGCCGCCCACC--GGAGGC---CC-GC---CGTCAA--------------------------CA--------C------CCC------------------AGCAGCAACAACAACAGC------------AGC------AACAGCAACAGCAGCAGCA------------ACAAC---------AGCA------------ACAGCAGCA----------------GC---AACAG---------GCG-TCGAAC
droYak3 3L:8421224-8421377 - AGCAGCAGC-ACTCC------CAG---C-ATCAGC---------------------------A-----------------GCAACATCACGGCCACCCCTTGCA---------------TCC----------GC---ATCACA--------------------------CA--------C------ACC------------------AGCAGCAACAACAGCAAC------------CGC------AACACCACCAGCAGCAGCAACA---------A---C---------AACAGCAGCACGCA---CAGCAGCA------GC-------AGCA---G------CATCATGCCGCCCA--
droEre2 scaffold_4784:5909804-5909933 + AGCAGGCGC-ATCCACAC----------------------------------------CAGGCCCAGATTCTGGCC-----CA------------------T------------------AC----------GC------A------------------------------C-GTA---GCCCAC------------C---AA---------------C------AGCAGCAGCAGCAAC------AGCA---GCAACAGCAGCA---GCAGCAGCAGCAGCAGACGCTCCAACA-------------------------------------------G------CATCTTCACCATCA--

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
CGCAGCCGC-CTGCCAA-------------------GCC---------GCCCAG-------------------------------GAC------ATCGCTAGCTTGCA------CTTT---------------------------------G-------AGCGTGCCCA---------------GCCGGC-------C---AA----CCCCGCAACAG------------CAACAACAGC------AACAGCAACAGCAGCAGCAACA------------GC---------AACA------------GTTGCCGCT----------------GC---AACAGAGCTTCCTCGCCGATCA--SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................................................................................................................................................................TGCCCA---------------GCCGGC-------C---AA----CCCCGC....................................................................................................................................................2111.001100000
......................................................................................................................................................................................................................................................................................................................GCCGCT----------------GC---AACAGAGCTTCCT...........2111.001000001
.................................................................................................GCTAGCTTGCA------CTTT---------------------------------G-------AGCGTGCCCA---------------.................................................................................................................................................................................2611.001100000
....................................................................................................................................................................................................................................................................................................ACA------------GTTGCCGCT----------------GC---AACAGAGCTTCC............2611.001000010
.....................................................G-------------------------------GAC------ATCGCTAGCTTGCA------CTTT---------------------------------G-------AGCGT.....................................................................................................................................................................................................2811.001100000
.........................................................................................................GCA------CTTT---------------------------------G-------AGCGTGCCCA---------------GCCGGC-------....................................................................................................................................................................2411.001100000
.................................................................................................GCTAGCTTGCA------CTTT---------------------------------G-------AGCGT.....................................................................................................................................................................................................2111.001100000
.................................................................................................................................................................................................................CCGCAACAG------------CAACAACAGC------A..................................................................................................................2020.501010000
.......................................................................................................................................................................................................................................................................CAACA------------GC---------AACA------------GTTGCCGCT----------------.............................2030.331100000
........................................................................................................................................................................................................................................................................AACA------------GC---------AACA------------GTTGCCGCT----------------G............................2030.331100000
........................................................................................................................................................................................................................................................................AACA------------GC---------AACA------------GTTGCCGCT----------------.............................1930.331000100
..............................................................................................................................................................................................................................................................CAGCAGCAGCAACA------------GC---------AACA------------GTTG..................................................24130.081100000
...........................................................................................................................................................................................................................................ACAGC------AACAGCAACAGCAGCAGCA................................................................................................24200.051000010
.........................................................................................................................................................................................................................................CAACAGC------AACAGCAACAGCAGCA...................................................................................................23200.051100000
droVir3
A-CAGCAGC-CTGGC-AA---C------------------------------------GGCCTCGAGCGC------------------------CTCGCTTGCG---------------CCCAAATCGAGCAGC---------ACC---AATCACACTG--------------------C------CACGCCAGC--A---AC------------CAAC------------------ACC------AACACCAACAGCAGCAGCA---------------GCAGCGATGCCGGCA------------GCGG----------------------CA---A---GGCCAGCTCGCCCAACA--SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................................................................................................................................ACACTG--------------------C------CACGCCAGC--A---AC------------CAAC------------------A...........................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................GCTTGCG---------------CCCAAATCGAGC......................................................................................................................................................................................................................................1911.001000000000000001000000000000000000000000000000000000000000000000
.....CAGC-CTGGC-AA---C------------------------------------GGCCTCGAGC.....................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................CGATGCCGGCA------------GCGG----------------------CA---A---GGCCAGCTC..........2711.001000100000000000000000000000000000000000000000000000000000000000
............GGC-AA---C------------------------------------GGCCTCGAGCGC------------------------CTC........................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...................................................................CGC------------------------CTCGCTTGCG---------------CCCAAAT...........................................................................................................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................................................A---------------GCAGCGATGCCGGCA------------GCGG----------------------CG---.......................2211.001000000000000000000000000000000000000000000000000000000000001000
..........CTGGC-AA---C------------------------------------GGCCTCGAGCGC------------------------...........................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................CACACTG--------------------C------CACGCCAGC--A---................................................................................................................................................................1820.501001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................C------------CAAC------------------ACC------AACACCAACAGCAGCAGCA---------------.................................................................................2730.331000000000000000000000000000000000000010000000000000000000000000
.........................................................................................................................................................................................................................................................ACCAACAGCAGCAGCA---------------GCA..............................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................ACACCAACAGCAGCAGCA---------------GCA..............................................................................21200.051000000000000000000000000000000000000100000000000000000000000000
droGri2
CGTTGGCGA-GTCCAA-----------C-A-------TC---------GCCGTC-----------------------GG------CAC------------TGCT-------------------------GCTGGCACACCAGCAAC---ACC-------------------------------TGCTGGCC------C---AA---------CACCAAC---------AGCACCAGCAAC------A------ACAGCAGCAGCA---------------GCAGCAACAGCAGCA------------GCAGGCTTT------GCACTTGGCTGCA---GTGCATCCTG-CACCGCATCA--SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.GTTGGCGA-GTCCAA-----------C-A-------TC---------GCCGTC-----------------------GG------C...................................................................................................................................................................................................................................................................................2711.00110
......................................................................................................................................................................................................................................................................GCA---------------GCAGCAACAGCAGCA------------GCA...................................................21200.10220
........................................................................................................................................................................................................................................CCAGCAAC------A------ACAGCAGCAGCA---------------GCA..............................................................................24150.07110
...............................................................................................................................................................................................................................................C------A------ACAGCAGCAGCA---------------GCAGCAACAG.......................................................................24200.05110
........................................................................................................................................................................................................................................CCAGCAAC------A------ACAGCAGCAGCA---------------.................................................................................21200.05101
......................................................................................................................................................................................................................................................................GCA---------------GCAGCAACAGCAGCA------------G.....................................................19200.05110
droWil2
TGCAGCCATCCACAT---------CCAAATCTAC-------A--------TCCACATCCAGCTCCAGCTCCTTGCC-----G-----------------TTGCA---------------TGT-------GC------AGCACCA--------------------------A--------C------AGC------------------AGCAGCAACAACAACAGC------------AGC------AACATCAACAGCAGCAGCAGCA------------GC---------AGCA------------CCAGCACCAGCAACGAA-------TG-----------CGACAACGATGATGA--SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............................................................................................................................................CCA--------------------------A--------C------AGC------------------AGCAGCAACAACAACAGC------------A...........................................................................................................................2750.20100001
..........................................................................................................................................................................A--------C------AGC------------------AGCAGCAACAACAACAGC------------............................................................................................................................23200.15300030
..................................................................................................................................................................................................................AGCAACAACAACAGC------------AGC------A..................................................................................................................19200.15300030
....................................................................................................................................................................................................................CAACAACAACAGC------------AGC------AAC................................................................................................................19200.15300030
.........................................................................................................................................AGCACCA--------------------------A--------C------AGC------------------AGCAGCAACA................................................................................................................................................2290.11100001
............................................................................................................................................................................................................................ACAGC------------AGC------AACATCAACAGCA......................................................................................................2190.11100010
..........................................................................................................................................................................................AGC------------------AGCAGCAACAACAACAGC------------A...........................................................................................................................22200.10200020
..............................................................................................................................................................................................................................................GC------AACATCAACAGCAGCAGCAGCA------------.................................................................................24110.09100010
........................................................................................................................................................................................................................AACAACAGC------------AGC------AACATCAAC..........................................................................................................21120.08100001
..............................................................................................................................................................................................................................AGC------------AGC------AACATCAACAGCAGCA...................................................................................................22140.07100010
...................................................................................................................................................................................................................GCAACAACAACAGC------------AGC------AACAT..............................................................................................................22160.06101000
...........................................................................................................................................CACCA--------------------------A--------C------AGC------------------AGCAGCAACAACA.............................................................................................................................................23180.06100010
............................................................................................................................................................................................C------------------AGCAGCAACAACAACAGC------------AG..........................................................................................................................21200.05101000
........................................................................................................................................................................................................................................................CATCAACAGCAGCAGCAGCA------------G................................................................................21200.05101000
..........................................................................................................................................................................................AGC------------------AGCAGCAACAACAACAGC------------AGC------A..................................................................................................................25200.05100010
...............................................................................................................................................................................................................................GC------------AGC------AACATCAACAGCA......................................................................................................18200.05100010
................................................................................................................................................................................................................................C------------AGC------AACATCAACAGCAGC....................................................................................................19200.05100010
..............................................................................................................................................................................................................................................................CAGCAGCAGCAGCA------------GC---------AGC...................................................................19200.05100001
...............................................................................................................................................................................................................AGCAGCAACAACAACAGC------------AGC------AA.................................................................................................................23200.05101000
.......................................................................................................................................................................................................................CAACAACAGC------------AGC------AACATCA............................................................................................................20200.05100001
.........................................................................................................................................................................................................................................................ATCAACAGCAGCAGCAGCA------------.................................................................................19200.05100010
...........................................................................................................................................CACCA--------------------------A--------C------AGC------------------AGCAGCAAC.................................................................................................................................................19200.05100010
...................................................................................................................................................................................................................................................................GCAGCAGCA------------GC---------AGCA------------CCAGCA................................................21200.05100010
........................................................................................................................................................................................................................................................CATCAACAGCAGCAGCAGC..............................................................................................19200.05100100
.........................................................................................................................................................................................................................................................ATCAACAGCAGCAGCAGCA------------GC---------A.....................................................................22200.05100010
dp5
CGCAACCGCCAGTGGCAACAA---C----ACAACAA----------------------------------------------------------C-----AGC-------------------------AGCAAC---------AAC---AAG-------------------------------TGCAGCAGCAGCACC---AA---------------C------AGCAGCAGCAGCAAC------A---ACAACAACAGCAGCA---------------GCAGCAACAACAGCA------------GCAG----------------------CAACAGCAA---TCGCTCAATGACCA--SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............GGCAACAA---C----ACAACAA----------------------------------------------------------C-----AGC-------------------------AG.......................................................................................................................................................................................................................................2211.0010100000000
...................................................................................................................................AAC---------AAC---AAG-------------------------------TGCAGCAGCA........................................................................................................................................................................1911.0010010000000
....................................................................................................................................AC---------AAC---AAG-------------------------------TGCAGCAGCAGCACC---AA---------------C------........................................................................................................................................2611.0010010000000
.................................................................................................................................................................................................................................................................................................ACAGCA------------GCAG----------------------CAACAGCAA---TCGCTCAATG......2911.0010010000000
................................................................................................................................................................................................AGCACC---AA---------------C------AGCAGCAGCAGCAAC------A---A..............................................................................................................2620.5010000100000
..............................................................................................................................................................................................................................................AC------A---ACAACAACAGCAGCA---------------GC...............................................................................20200.1530300000000
..................................................................................................................................................................................................CACC---AA---------------C------AGCAGCAGCAGCAAC------...................................................................................................................2270.1410000001000
..........................................................................................................................................................................................................................................................ACAACAACAGCAGCA---------------GCAGCAACAACA.....................................................................2790.1110100000000
.............................................................................................................................................................................................................................................................................................AACAACAGCA------------GCAG----------------------CAACAGC.....................21200.1020200000000
.................................................................................................................................................................................................................................................................CAGCAGCA---------------GCAGCAACAAC......................................................................19200.1020000200000
..........................................................................................................................................................................................................................C------AGCAGCAGCAGCAAC------A---AC.............................................................................................................19200.1020000200000
..............................................................................................................................................................................................GCAGCACC---AA---------------C------AGCAGCAGCAG.............................................................................................................................22100.1010000100000
...............................................................................................................................................................................................................................................C------A---ACAACAACAGCAGCA---------------GCAGC............................................................................22200.1020000200000
................................................................................................................................................................................................................................................................ACAGCAGCA---------------GCAGCAACA........................................................................18200.1020000200000
..........................................................................................................................................................................................................................................................ACAACAACAGCAGCA---------------GCAGCAACAAC......................................................................26100.1010100000000
..................................................................................................................................................................................................................................GCAGCAGCAGCAAC------A---ACAACAAC.......................................................................................................23200.1020200000000
........................................................................................................................................................................................................................................GCAGCAAC------A---ACAACAACAGC....................................................................................................20200.1020200000000
...............................................................................................................................................................................................................................................................AACAGCAGCA---------------GCAGCAACAACAGCA------------GCA...................................................28140.0710100000000
........................................................................................................................................................................................GCAGCAGCAGCACC---AA---------------C------AGCA....................................................................................................................................21140.0710100000000
..........................................................................................................................................................................................................A---------------C------AGCAGCAGCAGCAAC------A---ACAACAAC.......................................................................................................26140.0710010000000
.............................................................................................................................................................................................AGCAGCACC---AA---------------C------AGCAGC..................................................................................................................................18160.0610100000000
.................................................................................................................................................................................................................................................................CAGCAGCA---------------GCAGCAACAACAGCA------------G.....................................................24200.0510100000000
....................................................................................................................................................................................................CC---AA---------------C------AGCAGCAGCAGCAAC------...................................................................................................................20200.0510010000000
....................................................................................................................................................................................................CC---AA---------------C------AGCAGCAGCAGCAA..........................................................................................................................19200.0510000100000
..........................................................................................................................................................................................................................................................................................AGCAACAACAGCA------------GCAG----------------------CAA.........................20200.0510000100000
..........................................................................................................................................................................................................................................AGCAAC------A---ACAACAACAGCAGCA---------------GC...............................................................................24200.0510010000000
......................................................................................................................................................................................................................................................A---ACAACAACAGCAGCA---------------GCAG.............................................................................20200.0510000100000
...............................................................................................................................................................................................................................................C------A---ACAACAACAGCAGCA---------------GCAGCAAC.........................................................................25200.0510000100000
......................................................................................................................................................................................................................................................................GCA---------------GCAGCAACAACAGCA------------GCA...................................................21200.0510010000000
....................................................................................................................................................................................................................................................................CAGCA---------------GCAGCAACAACAGCA------------GCAG----------------------............................24200.0510100000000
......................................................................................................................................................................................................................................................A---ACAACAACAGCAGCA---------------GCAGC............................................................................21200.0510010000000
.....................................................................................................................................................................................................................................................................AGCA---------------GCAGCAACAACAGCA------------......................................................19200.0510000100000
...................................................................................................................................................................................................................................................................GCAGCA---------------GCAGCAACAACAGCA------------GC....................................................23200.0510100000000
.............................ACAACAA----------------------------------------------------------C-----AGC-------------------------AGCAAC---------AAC---A...................................................................................................................................................................................................................21200.0510100000000
...................................................................................................................................................................................................................................CAGCAGCAGCAAC------A---ACAACA.........................................................................................................20200.0510000001000
..................................................................................................................................................................................................................................................................AGCAGCA---------------GCAGCAACAACAGCA------------G.....................................................23200.0510100000000
............................................................................................................................................................................................................................................CAAC------A---ACAACAACAGCAGCA---------------GCAG.............................................................................24200.0510100000000
..........................................................................................................................................................................................................................C------AGCAGCAGCAGCAAC------A---ACAACAA........................................................................................................24200.0510100000000
.........................................................................................................................................................................................................................................CAGCAAC------A---ACAACAACAGCA...................................................................................................20200.0510100000000
............................................................................................................................................................................................................................................CAAC------A---ACAACAACAGCAGCA---------------.................................................................................20200.0510100000000
....................................................................................................................................................................................................................................................................CAGCA---------------GCAGCAACAACAGCA------------GC....................................................22200.0510100000000
...............................................................................................................................................................................................................................................C------A---ACAACAACAGCAGCA---------------GC...............................................................................19200.0510000100000
.................................................................................................................................................................................................................................................................CAGCAGCA---------------GCAGCAACAACAGCA------------GCAG----------------------CA..........................29200.0510001000000
............................................................................................................................................................................................................................................................AACAACAGCAGCA---------------GCAGCAAC.........................................................................21200.0510010000000
..........................................................................................................................................................................................................................................AGCAAC------A---ACAACAACAGCAGCA---------------.................................................................................22200.0510010000000
..................................................................................................................................................................................................................................................................AGCAGCA---------------GCAGCAACAACAGCA------------GCA...................................................25200.0510100000000
......................................................................................................................................................................................................................................CAGCAGCAAC------A---ACAACAACAGCAGCA---------------.................................................................................26200.0510010000000
.............................................................................................................................................................................................................................................AAC------A---ACAACAACAGCAGCA---------------G................................................................................20200.0510100000000
...........................................................................................................................................................................................................................................GCAAC------A---ACAACAACAGCAGCA---------------GCAGT............................................................................26200.0510100000000
droPer2
CGCAACCGCCAGTGGCAACAA---C----ACAACAA----------------------------------------------------------C-----AGC-------------------------AGCAAC---------AAC---AAG-------------------------------TGCAGCAGCAGCACC---AA---------------C------AGCAGCAGCAGCAAC------A---ACAACAGCAGCAGCA------------A------CAACAACAGCA------------ACAACAGCA----------------GCAACAGCAA---TCGCTCAATGACCA--SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................................................................................................................................................................................................................................................AACAACAGCA------------ACAACAGCA----------------GCAACAG......................2650.201010000
..................................................................................................................................................................................................CACC---AA---------------C------AGCAGCAGCAGCAAC------A---...............................................................................................................2370.141001000
................................................................................................................................................................................................................................................................................................AACAGCA------------ACAACAGCA----------------GCAACAG......................2390.111010000
.....................................................................................................................................................................................................................................................................................A------CAACAACAGCA------------ACAACAGCA----------------GC...........................23110.091001000
................................................................................................................................................................................................AGCACC---AA---------------C------AGCAGCAGCAGC............................................................................................................................21150.071001000
.......................................................................................................................................................................................................................................AGCAGCAAC------A---ACAACAGCAG.....................................................................................................20200.051010000
................................................................................................................................................................................................................................................................................................AACAGCA------------ACAACAGCA----------------GCAAC........................21200.051010000
..................................................................................................................................................................................................................................................................AGCAGCA------------A------CAACAACAGCA------------A.....................................................20200.051010000
...................................................................................................................................................................................................................................CAGCAGCAGCAAC------A---ACAACAGCAGCA...................................................................................................26200.051001000
droAna3
CGCAGCAGC-AGCAA-----G---C----GCTGC---------------------------------------------AGCA------------------A----------------------------------CACCACCAGC---ACC-------------------------------TCCAGCAGCAGCACC---AGCAACAGCAGCAACAACAACAGC------------AGC------AACAGCAACAGCAGCAGCAACA------------AC---------AACA------------ACAGCAGCA----------------GC---AGCAG----------------A--SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................GC---------------------------------------------AGCA------------------A----------------------------------CACCACCAGC---ACC-------------------------------TCCAGC............................................................................................................................................................................2611.001100000
........................................................................................................................................CACCACCAGC---ACC-------------------------------TCCAGC............................................................................................................................................................................1911.001000001
.....................................................................................................................................................................................................................................................................AGCAACA------------AC---------AACA------------ACAGCAGCA----------------GC---AGC.....................2740.251010000
....................................................................................................................................................................................................................................................................CAGCAACA------------AC---------AACA------------ACAGCAGCA----------------GC---AG......................2760.171100000
.............................................................................................................................................................................................................................................................ACAGCAGCAGCAACA------------AC---------AACA------------ACAGC.................................................2660.171010000
......................................................................................................................................................................................................................................................................GCAACA------------AC---------AACA------------ACAGCAGCA----------------GC---AGC.....................2670.141010000
............................................................................................................................................................................................................................................................AACAGCAGCAGCAACA------------AC---------AAC...................................................................21200.102020000
...........................................................................................................................................................................................................................................................................A------------AC---------AACA------------ACAGCAGCA----------------GC---A.......................19200.102020000
...................................................................................................................................................................................................................................................................GCAGCAACA------------AC---------AACA------------ACAG..................................................19200.102000002
...........................................................................................................................................................................................GCAGCAGCACC---AGCAACAG........................................................................................................................................................19120.081100000
.........................................................................................................................................................................................................................................................AGCAACAGCAGCAGCAACA------------AC---------AACA------------......................................................25140.071010000
..........................................................................................................................................................................................................................CAACAGC------------AGC------AACAGCAACAGCAGCAGC.................................................................................................28160.061010000
....................................................................................................................................................................................................................CAACAACAACAGC------------AGC------AACAGC.............................................................................................................22170.061010000
......................................................................................................................................................................................................................ACAACAACAGC------------AGC------AACAGCA............................................................................................................21180.061010000
..............................................................................................................................................................................................................................................................CAGCAGCAGCAACA------------AC---------AACA------------ACA...................................................23200.051100000
...............................................................................................................................................................................................................................GC------------AGC------AACAGCAACAGCAGCAGCA................................................................................................24200.051100000
....................................................................................................................................................................................................................................................................CAGCAACA------------AC---------AACA------------ACAGCAGC..............................................22200.051010000
.....................................................................................................................................................................................................................................................................AGCAACA------------AC---------AACA------------ACAGCAGC..............................................21200.051000001
...............................................................................................................................................................................................................................GC------------AGC------AACAGCAACAGCAGCAGCAAC..............................................................................................26200.051010000
......................................................................................................................................................................................................................................................AACAGCAACAGCAGCAGCAA...............................................................................................20200.051010000
................................................................................................................................................................................................................GCAGCAACAACAACAGC------------A...........................................................................................................................18200.051010000
..........................................................................................................................................................................................................................................................................CA------------AC---------AACA------------ACAGCAGCA----------------GC---AGC.....................22200.051000001
........................................................................................................................................................................................................................................................................................AC---------AACA------------ACAGCAGCA----------------GC---AG......................19200.051000001
...........................................................................................................................................................................................................................................................CAACAGCAGCAGCAACA------------AC---------AACA------------......................................................23200.051010000
............................................................................................................................................................................................................................................................AACAGCAGCAGCAACA------------AC---------A.....................................................................19200.051100000
.....................................................................................................................................................................................................................................................................AGCAACA------------AC---------AACA------------ACAGC.................................................18200.051010000
....................................................................................................................................................................................................................CAACAACAACAGC------------AGC------AAC................................................................................................................19200.051000001
.........................................................................................................................................................................................................................................................................ACA------------AC---------AACA------------ACAGCAGCA----------------.............................18200.051000100
.........................................................................................................................................................................................................................................................................ACA------------AC---------AACA------------ACAGCAGCA----------------GC---AGC.....................23200.051010000
.............................................................................................................................................................................................................................................................ACAGCAGCAGCAACA------------AC---------AAC...................................................................20200.051010000
.......................................................................................................................................................................................................................................................................CAACA------------AC---------AACA------------ACAGCAGCA----------------GC---A.......................23200.051010000
.........................................................................................................................................................................................................................................................................ACA------------AC---------AACA------------ACAGCAGCA----------------GC---AGCA....................24200.051000001
.............................................................................................................................................................................................................................................AGC------AACAGCAACAGCAGC....................................................................................................18200.051010000
............................................................................................................................................................................................................AACAGCAGCAACAACAACA..........................................................................................................................................19200.051001000
.............................................................................................................................................................................................................................................AGC------AACAGCAACAGCAGCAGC.................................................................................................21200.051001000
......................................................................................................................................................................................................................................................................GCAACA------------AC---------AACA------------ACAGCAGC..............................................20200.051010000
droBip1
G-CGGCCGT-GCCAC------CGA---C------------------------------GAGGGCCAGTACCTT--------------------------------------------------------GTTGC---------------ACT-----------CACCCA--CCGAA---GAGGTG---------------------------CAACAACAG---------CAACAGCAAC------AGCA---GCAGCAGCAGCA------------GCAAC------AGCAACAGTTGCA------TGCC---TC------GT-------CGCG---AAGG--GCTTACCACCAACAG--SizeHit CountTotal NormTotal
No Reads
droKik1
GGCAGCCGC-AGCAGCATCAG---C----GCCTCGT---------------------------------------------------------------TTGCT-------------------------GCTGC---------AAC---TGG--------------AC--GCAGTG---GCTGTC------------C---AG---------------C------AGCAGCAACAGCAAC------AACA---GCAGCAGCA------------------GCAACAACACCAGCA------------GCAGCAACA----------------GC---AACAAATCGCTGCCGCTGGCAA--SizeHit CountTotal NormTotal
No Reads
droFic1
AGCAGCAGC-TCTTC---------------------GCC---------GCCCAGC-------A------G-----TTGCAGCT------------------G----------------------------------CACCACCAGC---AAC-------------------------------TGCAGCAGCAG------------------CAACAAC------------------AGC------AGCAGCAACAGCAGCAGCAACA------GCAGCAGCAGCAACAACAGCA------------GCAGCAGCA----------------GCA---GTACAGCTACTACTTCAGTCG--SizeHit CountTotal NormTotal
No Reads
droEle1
AGCAATGCG-AACAACAACAA---C----GCACTGG--T--GACCGCCACCCAGC-------A------G-----C-----------------------------------------------------------------------------------------------------------TGCAGCAGCTCCAGCAGCAA---CAACAGCAGCAG------------CAACAGCAGC------AGCAGCAACAGCAGCAGCAGCA------------AC---------AACA------------GCAGCAACA----------------GC---AACAACTCCT----GGTGGCCGGTSizeHit CountTotal NormTotal
No Reads
droRho1
CAA--GCACCT-G-GCAG---CTGC----CCAGCA----------------------------------G------------------------C-----AT---GCA------CTTA-GCCAGGCCCAGCAGC---------AAC---ATGCCCATCA------------C-CAA---GCCCAC------------C---AG---------------C------AGCAGCAACACCAACAACAGCAACACCAACAGCATCAGCA---------------------------ACA------------GCAGCAGCA----------------GC---AGCAT---ATCCATGCCCAGCA--SizeHit CountTotal NormTotal
No Reads
droBia1
GGCAGCGGC-AGCAGCAG-------------------CC---------GCCCAGC-------A------G-----CAACAGCA------------------A----------------------------------CACCAGCAAC---ACC-------------------------------AGCAACAGCAGCTCC---AG---------------C------------AAC---AGC------A------GCACCAGCAACA---GCAGCAGCACCAGCAGCAGCACCAGCA------------GCAG---CA----------------GC---AACAG-------TCGCAGGTCA--SizeHit CountTotal NormTotal
No Reads
droTak1
AAGAGCTGC-GACAA---------------------TTT---------GGCC-------------------------AG------GAC------------TTCCAGCT------------------------GG---CCC-CCAACAACACT-TCACC--------------------GC------CAC------------------AGCAGCAACCACAGCAG------C------AGC------AGCAGCAAGTGCAGCAGCA------------ACAGCAGCAGCAACAGCG------------AGCC---TT------GC-------AGCA---GTCTGCCTCGCCCCCGCAACA--SizeHit CountTotal NormTotal
No Reads
droEug1
CTCAGCCGC-GGCAA------CATC----CCAAGA---------------------------A-------------------------------G-----CGA---AA------GTTCGATCCAGCCGAGCTGG---------ACA---AAA-------------------------------CGGAGC------------------------------------------------AGC------ATCCCCAACAGCAGCAGCAACA---------ACAACAACTGAGTCTGCA------------AAAGCA-------------------GCA---G------AAACCCGCCGATAC--SizeHit CountTotal NormTotal
No Reads
dm3
AGTGGCCTC-GTTGT------CCA---A--------------------------G----AAGACC-----------------------A----A--------CATACT---------------------GCTAC---------TAC---AGG-------AGCCAACCCA------GTTGG---TGCAGCAG---------------------GTACAGCAGCAG------C------AGC------AGCAGCAACAGCAGCAGCA------------ACAGCAACTGCAGCAGCA------------GGTGCAGCA----------------GCA---ACACCACGTT-CTGCCCATCA--SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................AGG-------AGCCAACCCA------GTTGG---TGC...............................................................................................................................................................................2118.0080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................CA------GTTGG---TGCAGCAG---------------------GTACAGCAG............................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................CA------------ACAGCAACTGCAGCAGCA------------GGT...................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................AGCAG---------------------GTACAGCAGCAG------C------AGC------AGCAGC.............................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................AGG-------AGCCAACCCA------GTTGG---TGCAGC............................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................G----AAGACC-----------------------A----A--------CATACT---------------------GCTAC---------..........................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CA---A--------------------------G----AAGACC-----------------------A----A--------CATACT---------------------GCTAC---------TAC---AGG-------A.........................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................CATACT---------------------GCTAC---------TAC---AGG-------AGC.......................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................AG---------------------GTACAGCAGCAG------C------AGC------AGCA...............................................................................................................2211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................TAC---AGG-------AGCCAACCCA------GTTGG---TGCAGCAG---------------------G....................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................CCA---A--------------------------G----AAGACC-----------------------A----A--------CATACT---------------------GC......................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AGTGGCCTC-GTTGT------CCA---A--------------------------G----AAGACC-----------------------.................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................CCCA------GTTGG---TGCAGCAG---------------------GTACAGCA.............................................................................................................................................2511.0010000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................CA------------ACAGCAACTGCAGCAGCA------------GG....................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................TGG---TGCAGCAG---------------------GTACAGCAGCAG------C------AGC------A..................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................T---------------------GCTAC---------TAC---AGG-------AGCCAACCCA------GTTG......................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.....CCTC-GTTGT------CCA---A--------------------------G----AAGACC-----------------------A----A--------CA.................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AGTGGCCTC-GTTGT------CCA---A--------------------------G----AAGACC-----------------------A----A--------CA.................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................TGCAGCAG---------------------GTACAGCAGCAG------C------A...........................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...GGCCTC-GTTGT------CCA---A--------------------------G----AAGA..........................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AGTGGCCTC-GTTGT------CCA---A--------------------------G----AAGACC-----------------------A----A--------...................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................CATACT---------------------GCTAC---------TAC---AGG-------AGCCAACCC.................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................CAGCAACTGCAGCAGCA------------GGTGCAGCA----------------GCA---.......................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................TGCAGCAG---------------------GTACAGCAGCAG------...................................................................................................................................2011.0010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................AGCAGCA------------GGTGCAGCA----------------GCA---.......................1950.6030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................CAACTGCAGCAGCA------------GGTGCAG...............................................2120.5010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................AGCAGCA------------GGTGCAGCA----------------GCA---AC.....................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................CAACAGCAGCAGCA------------ACAGCAACTGCAGA......................................................................2820.5010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................AGCAG------C------AGC------AGCAGCAACA.........................................................................................................19200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001300000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................GCAG---------------------GTACAGCAGCAG------C------AGC------C..................................................................................................................2130.3310000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................GTACAGCAGCAG------C------AGC------AGCA...............................................................................................................2030.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................AGCAG------C------AGC------AGCAGCAACAGC.......................................................................................................21200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000
...............................................................................................................................................................................................................................................................AGCAGCAGCA------------ACAGCAAC............................................................................18200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................ACAGCAGCAG------C------AGC------AGCAGCAA...........................................................................................................22200.2040000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.......................................................................................................................................................................................................................................................GCAGCAACAGCAGCAGCA------------ACAGCAA.............................................................................2560.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................GCAGCAGCA------------GGTGCAGCA----------------.............................1880.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................ACAGCAGCAG------C------AGC------AGCAGCA............................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
...............................................................................................................................................................................................................................................C------AGCAGCAACAGCAGCAGCA------------AC..................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................ACAGCAGCAG------C------AGC------AGCAGCAACA.........................................................................................................24200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................C------AGCAGCAACAGCAGCAGCA------------A...................................................................................21200.1020000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................GCA------------ACAGCAACTGCAGCA.....................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................AG------C------AGC------AGCAGCAACAGC.......................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................CAG------C------AGC------AGCAGCAACAGCAGCAGCA------------AC..................................................................................28190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................GCAGCAG------C------AGC------AGCAGCAACAGCAGCAGC.................................................................................................29190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................AG------C------AGC------AGCAGCAACAGCAGCAG..................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................................CAACAGCAGCAGCA------------ACAGCAA.............................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................ACAGCAGCAGCA------------ACAGCAA.............................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................CAGCAGCAG------C------AGC------AGCAGCAACAGCA......................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................C------AGCAGCAACAGCAGCAGCA------------ACAG................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................GCAGCAACAGCAGCAGCA------------ACA.................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................CAGCAG------C------AGC------AGCAGCAACAGCAGC....................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................CAG------C------AGC------AGCAGCAACAGCAGCAG..................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................CAGCAACAGCAGCAGCA------------A...................................................................................18200.0510000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................GCAACAGCAGCAGCA------------ACAGCA..............................................................................21200.0510000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................CAG------C------AGC------AGCAGCAACAGCAGC....................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................GCAG------C------AGC------AGCAGCAACAGCAGC....................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................AGCAG------C------AGC------AGCAGCAACAGCAG.....................................................................................................23200.0510000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................AGCAGCA------------ACAGCAACTGCA........................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................ACAGCAGCAG------C------AGC------AGCAGC.............................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.........................................................................................................................................................................................................................................................AGCAACAGCAGCAGCA------------ACAGCA..............................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................GCA------------ACAGCAACTGCAGCAGC...................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................AACAGCAGCAGCA------------ACAGCA..............................................................................19200.0510000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................CAGCAGCAGCA------------ACAGCAACT...........................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................AGC------AGCAGCAACAGCAGCAGC.................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................AG------C------AGC------AGCAGCAACAGCAGCAGCA------------....................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................AGC------AGCAGCAACAGCAG.....................................................................................................17200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TGCTGTCGC-CATCTCC-------------------GCC---------GCTCAAC-------G------A-----TCAG------ATCA----G--------CTTGCTATTC-------CC------------------------C---AAG-------TGCCGACCCAAA--CA---GC------AGC------------------AGCAGCAGCAGCAGCAG------C------AGC------AGCAGCAGCAGCAGCAGCA------------ACAGC---------AGCA---GCAGCAACAGCAA---CA------GC-------AGCA---A--------CTTCAACCAGCA--SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................................................................................................................................................................................GC------AGC------------------AGCAGCAGCAGCAG............................................................................................................................................19200.05100010000000000000
..................................................................................................................................................................................................................................................................AGCAGCA------------ACAGC---------AGCA---...............................................................16200.05100000010000000000
...............................................................................................................................................................................................................................................................AGCAGCAGCA------------ACAGC---------AGCA---GCAGC..........................................................24200.05110000000000000000
droSec2
CGCCGCG-C-ACCGTCA-------------------GCCGCA--------TCCTT-------G------C-----CCAG------GATG----G--------CGTGGTGCCGCCCACC--GGAGGC---CC-GC---CGTCAA--------------------------CA--------C------CCC------------------AGCAGCAACAACAACAGC------------AGC------AACAGCAACAGCAGCAGCA------------ACAAC---------AGCA------------ACAGCAGCA----------------GC---AACAG---------GCG-TCGAACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........CCGTCA-------------------GCCGCA--------TCCTT-------G------C-----CC............................................................................................................................................................................................................................................................................................2111.0010010
..............................................................................................................CGCCCACC--GGAGGC---CC-GC---C...............................................................................................................................................................................................................................1911.0010010
.....................................................................................................................................................................................................................................................................................................................AGCAGCA----------------GC---AACAG---------GCG-TCGAAC2311.0010100
........................................................................................................................................................................................................................................................................A------------ACAAC---------AGCA------------ACAGCAGCA----------------GC---........................21200.0510001
...........................................................................................................................................................................................................................................................CAACAGCAGCAGCA------------ACAAC---------A.....................................................................20200.0510010
droYak3
AGCAGCAGC-ACTCC------CAG---C-ATCAGC---------------------------A-----------------GCAACATCACGGCCACCCCTTGCA---------------TCC----------GC---ATCACA--------------------------CA--------C------ACC------------------AGCAGCAACAACAGCAAC------------CGC------AACACCACCAGCAGCAGCAACA---------A---C---------AACAGCAGCACGCA---CAGCAGCA------GC-------AGCA---G------CATCATGCCGCCCA--SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................................................................................................................................................................................................................................................................GCAGCACGCA---CAGCAGCA------GC-------AGC...........................2321.00202000000000
.........................................................................................................................................ATCACA--------------------------CA--------C------ACC------------------AGCAGCAACAACA.............................................................................................................................................2520.50101000000000
.............................................................................................................................................CA--------------------------CA--------C------ACC------------------AGCAGCAACAACAGC...........................................................................................................................................2320.50101000000000
...........................C-ATCAGC---------------------------A-----------------GCAACATCACGGCCAC.........................................................................................................................................................................................................................................................................2420.50101000000000
..........................................................................................................................................................................................................................................................................CA---------A---C---------AACAGCAGCACGCA---CAGCA................................................2320.50101000000000
AGCAGCAGC-ACTCC------CAG---C-ATCAGC---------------------------...........................................................................................................................................................................................................................................................................................................2420.50101000000000
.........................................................................................................................................ATCACA--------------------------CA--------C------ACC------------------AGCAGCA...................................................................................................................................................1920.50101000000000
..........................................................................................................................................................................................................................................................................................................GCACGCA---CAGCAGCA------GC-------AGC...........................2020.50101000000000
.......................................................................................................................TCC----------GC---ATCACA--------------------------CA--------C------ACC------------------AGCAGCAACAAC..............................................................................................................................................2920.50101000000000
...................................................................................ACATCACGGCCACCCCTTGCA---------------TCC----------GC---AT..............................................................................................................................................................................................................................2820.50101000000000
...........................................................................................................................................................................................................................................................CACCAGCAGCAGCAACA---------A---C---------AACAGCAG..............................................................2730.33101000000000
..............................................................................................................................................................................................................................................GC------AACACCACCAGCAGCAGCAACA---------A---C---------......................................................................2630.33101000000000
........................................................................................................................................................................................................................................................................AACA---------A---C---------AACAGCAGCACGC.........................................................1930.33101000000000
...................................................................................................................................................................................C------ACC------------------AGCAGCAACAACAGCAAC------------............................................................................................................................2250.20101000000000
............................................................................................................................................................................................C------------------AGCAGCAACAACAGCAAC------------C...........................................................................................................................2060.17100100000000
......................................................................................................................................................................................................................................................AACACCACCAGCAGCAGCAACA---------....................................................................................2280.13101000000000
......................................................................................................................................................................................................................................................AACACCACCAGCAGCAGCAA...............................................................................................2090.11101000000000
...............................................................................................................................................................................................................................................C------AACACCACCAGCAGCAG..................................................................................................18130.08100001000000
droEre2
AGCAGGCGC-ATCCACAC----------------------------------------CAGGCCCAGATTCTGGCC-----CA------------------T------------------AC----------GC------A------------------------------C-GTA---GCCCAC------------C---AA---------------C------AGCAGCAGCAGCAAC------AGCA---GCAACAGCAGCA---GCAGCAGCAGCAGCAGACGCTCCAACA-------------------------------------------G------CATCTTCACCATCA--SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............CACAC----------------------------------------CAGGCCCAGATTCT.................................................................................................................................................................................................................................................................................................1911.0011000000
....................................................................................................................................................................................CCCAC------------C---AA---------------C------AGCAGCAGCAGCAAC------AGCA---............................................................................................................2811.0011000000
.......................................................................................................................................................................................................................................................GCA---GCAACAGCAGCA---GCAGC........................................................................................20200.1531000020
..............................................................................................................................................................................................................................................................CAACAGCAGCA---GCAGCAGC.....................................................................................19200.1020002000
.............................................................................................................................................................................................................................................AAC------AGCA---GCAACAGCAGCA---.............................................................................................19200.1020002000
.........................................................................................................................................................................................................AA---------------C------AGCAGCAGCAGCAAC------AGCA---GC..........................................................................................................24200.0510000010
.......................................................................................................................................................................................................................................AGCAGCAAC------AGCA---GCAACAGCAGCA---G............................................................................................26200.0511000000
.........................................................................................................................................................................................................AA---------------C------AGCAGCAGCAGCAAC------AGCA---GCA.........................................................................................................25200.0510001000
.....................................................................................................................................................................................CCAC------------C---AA---------------C------AGCAGCAGCA..............................................................................................................................18200.0510000010
........................................................................................................................................................................................................................................GCAGCAAC------AGCA---GCAACAGCAGCA---GC...........................................................................................26200.0510100000
.........................................................................................................................................................................................................................................CAGCAAC------AGCA---GCAACAGCAGCA---.............................................................................................23200.0511000000
..........................................................................................................................................................................................................................................AGCAAC------AGCA---GCAACAGCAGCA---GCAGC........................................................................................27200.0511000000
..........................................................................................................................................................................................................A---------------C------AGCAGCAGCAGCAAC------AGC................................................................................................................20200.0511000000
...............................................................................................................................................................................................................................................................AACAGCAGCA---GCAGCAGCAGC..................................................................................21200.0510001000

Generated: 05/18/2015 at 02:44 AM