dmo_2492

exon [dmoj_GLEANR_13471:4]; CDS [Dmoj\GI13555-cds]; exon [dmoj_GLEANR_13471:3]; CDS [Dmoj\GI13555-cds]; intron [Dmoj\GI13555-in]

Name	Class	Family	Strand
(TGG)n	Simple_repeat	Simple_repeat	+

##################################################------------------------------------------------------------------------------------------------################################################## TTCAGGAGGTAATGGAGGTGGCTCTGGATGTAATGGAGGTGGTTCCGGAGGTAATGGATGTAATGGATGTATATGAGGTGCTTCTGGATGTAATGGAGGTGGTTCAGGAGGTAATGGATGTAATGGAGTTGGCTCTGGATGTATAGGAGGTGATTACGGAGGTGGTTCAGGAGGTAATGGAGGTAATGGAGGTGGC ****************************************************...............(((((....(((((((((((............))))).))))))....)))))..**********************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V110 male body	M046 female body
.............................................................................................................................................................................GTAATGGAGGTAATGGATGTG..	21	1	1	2.00	2	2	0
......................................................TGGATGTAATGGATGTATATGAGGTGCT..................................................................................................................	28	0	1	1.00	1	1	0
............................................................................................ATGGATGTGGTTCAGGAGGTAATGGAT.............................................................................	27	1	1	1.00	1	1	0
............................................CAGGAGGTAATGGATGTAATGGATGT..............................................................................................................................	26	1	1	1.00	1	1	0
.........................................................ATGTAATGGATGTATATGAGGTGCTTCT...............................................................................................................	28	0	1	1.00	1	1	0
..........................................................TGTAATGGATGTATATGAGGT.....................................................................................................................	21	0	1	1.00	1	1	0
..................................................................................................GTGGTTCAGGAGGTAATGGATGTAAT........................................................................	26	0	1	1.00	1	1	0
................................................................................................................................................AGGAGGTGATTACGGAGGTGG...............................	21	0	1	1.00	1	1	0
..........................GATGTAATGGAGGTGGTTC.......................................................................................................................................................	19	0	2	0.50	1	1	0
......................................................................................GATGTAATGGAGGTGGTTC...........................................................................................	19	0	2	0.50	1	1	0
............................TGTAATGACGGTGTTTCCGGA...................................................................................................................................................	21	3	2	0.50	1	1	0
..................................................................................TCTGGATGTAATGGAGGTGGTTC...........................................................................................	23	0	2	0.50	1	1	0
......................TCTGGATGTAATGGAGGTGGTTC.......................................................................................................................................................	23	0	2	0.50	1	1	0
...AGGATGTAACGGAGGTGGCT.............................................................................................................................................................................	20	2	2	0.50	1	1	0
................................................................................................................................................................GGTGGTTCAGGAGGTAATGGAG..............	22	0	2	0.50	1	1	0
...............................................................................................GATGTGGTTCAGGAGGTAATGGATGT...........................................................................	26	1	5	0.40	2	2	0
...............................................................................................................................GTTGGCTCTGGATGTATAGGAGG..............................................	23	0	3	0.33	1	1	0
..................................................................................................................TGGATGTAATGGAGTTGGCTCTGGA.........................................................	25	0	3	0.33	1	1	0
.............................................................................................TGGAGGTGGTTCAGGAGGTAAT.................................................................................	22	0	3	0.33	1	1	0
..............................................................................................GGATGTGGTTCAGGAGGTAATG................................................................................	22	1	7	0.29	2	2	0
.............................................................................................................................................................GGATGTGGTTCAGGAGGTAATG.................	22	1	7	0.29	2	2	0
..................................................................................TCTGGATGTAATGGAGGTGG..............................................................................................	20	0	4	0.25	1	1	0
......................TCTGGATGTAATGGAGGTGG..........................................................................................................................................................	20	0	4	0.25	1	1	0
.........................................................................................................AGGAGGTAATGGATGTAATGGAT....................................................................	23	1	4	0.25	1	1	0
.............................................AGGAGGTAATGGATGTAATGGAT................................................................................................................................	23	1	4	0.25	1	1	0
..................................................................................................................................GGCTCTGGATGTATAGGAGGT.............................................	21	0	4	0.25	1	1	0
....................................................................................................GGTTCAGGAGGTAATGGATGT...........................................................................	21	0	5	0.20	1	1	0
...............................................................................................GATGTGGTTCAGGAGGTAATGG...............................................................................	22	1	7	0.14	1	1	0
..............................................................................................................................................................GATGTGGTTCAGGAGGTAATGG................	22	1	7	0.14	1	1	0
................................................................................................................................................................GGTGGTTCAGGAGGTAATGGA...............	21	0	7	0.14	1	1	0
.................................................................................................GGTGGTTCAGGAGGTAATGGA..............................................................................	21	0	7	0.14	1	1	0
................................................................................................................................................................GGTGGTTCAGGAGGTAATG.................	19	0	7	0.14	1	1	0
.............................................................................................................................................................GGATGTGGTTCAGGAGGTA....................	19	1	7	0.14	1	1	0
..............................................................................................GGATGTGGTTCAGGAGGTA...................................................................................	19	1	7	0.14	1	1	0
................................................................................................................................................................GGTGGTTCAGGAGGTAATGG................	20	0	7	0.14	1	1	0
.................................................................................................GGTGGTTCAGGAGGTAATGG...............................................................................	20	0	7	0.14	1	1	0
.................................................................................................GGTGGTTCAGGAGGTAATG................................................................................	19	0	7	0.14	1	1	0
.............................................................................................................................................................GGATGTGGTTCAGGAGGTAAT..................	21	1	7	0.14	1	1	0
.................................................................................................GGTGGTTCAGGAGGTAAT.................................................................................	18	0	7	0.14	1	1	0
................................................................................................................................................................GGTGGTTCAGGAGGTAAT..................	18	0	7	0.14	1	1	0
..............................................................................................GGATGTGGTTCAGGAGGTAAT.................................................................................	21	1	7	0.14	1	1	0
...............................................................................................................................................................................AATGGATGTAGTGGAGGTGGC	21	2	8	0.13	1	1	0
............................TGTAATGACGGTGTTTCCGG....................................................................................................................................................	20	3	8	0.13	1	0	1
................................................................................................................AATGGATGTAGTGGAGGTGGC...............................................................	21	2	8	0.13	1	1	0
...............................................................................................................TAATTGATGTAATGGACT...................................................................	18	2	17	0.12	2	0	2
................................................................................................................................................................GGTGGTTCAGGATGTAACGGA...............	21	2	11	0.09	1	1	0
.................................................................................................GGTGGTTCAGGATGTAACGGA..............................................................................	21	2	11	0.09	1	1	0
.............................GTAATGACGGTGTTTCCGG....................................................................................................................................................	19	3	14	0.07	1	0	1
....CGCGGTAATGTAGGTGGC..............................................................................................................................................................................	18	3	20	0.05	1	0	1
..................................................................................................................................................................................CGCGGTAATGTAGGTGGC	18	3	20	0.05	1	0	1

AAGTCCTCCATTACCTCCACCGAGACCTACATTACCTCCACCAAGGCCTCCATTACCTACATTACCTACATATACTCCACGAAGACCTACATTACCTCCACCAAGTCCTCCATTACCTACATTACCTCAACCGAGACCTACATATCCTCCACTAATGCCTCCACCAAGTCCTCCATTACCTCCATTACCTCCACCG **********************************************************************...............(((((....(((((((((((............))))).))))))....)))))..****************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M060 embryo
.........................................................................................CATGACCTCCACCAAGTCCTC......................................................................................	21	1	3	0.33	1	1

Species	Coordinate	ID	Alignment
droMoj3	scaffold_6680:14744722-14744917 +	dmo_2492	TTCAGG---------AGGTAATGGAGG---------------------------------------------------------TGGCTCTGGATGTAATGGAGGTGGTTCCGGAGGTAA------------TGGA------------------------------------------------------------------------------------TGTAATGGATGTATAT---------------------GA------------------------GG---------TGCTTCTGGATGT------AATGGAGGTGGT------TCAG-----------------------------------------------------------------GAGGTAATGGATGTAATGGAGTTG---GCTCTGGATGTATAGGAGGTGATTAC---GGAGGTGGTTCAGGAG------------------------------GT---AATGGAGGTAATGGAGGTGGC
droVir3	scaffold_10324:348736-348931 -		TGCTGG---------AGGTGGTGCGGG---AGGA------GG------------------------T---GCTGGAGCTGGAGGCTACGGTGGA------------GGAGCAGGAGCTGG------------CGGA------------------------------------------------------------------------------------GCTGGTGGATT------------------------TGGTGGTGGCGC---------------------------AGGTCGTGGAGGC------------------------GCTGGA-----------------------------GGTGGTGCTG------------------------GAGGAGGCGCTGGAGGTGGTGCTG---------------GAGCTGGAGGTTAC---GGTGGAGGCGCAGGTG------------------------------CT---GGTGGAGCTGGTGGATTTGGT
droGri2	scaffold_15245:15276445-15276646 +		AGCTGG---------AGGTTATGGAGG---------------------------------------------------------TGGCGCCGGAGGTGCTGGGGGCGCTGGTGGTGCAGGAGC------------------------------------------------------------------------------------------------------TGGAGGTTATG---------------------GA------------------------GG---------TGGCGCTGGAGGTGCCGGTCGTG------GTGGAGGCGCTG-----------------------------------------------------------------GTGGTGCTGGAGGCTATGGTGGAGGCGCGGGAGGTGCTGGAGCTGGAGGTTAT---GGAGGTGGCGCCGGAG---------------------------GTGCT---GGAGGCGCTGGTGGTGCAGGA
droWil2	scf2_1100000004515:3267859-3268060 +		TGGAGG---------TGGTGGTGGAGG---------------------------------------------------------AGGAGGTGGAGGTGGTGGTGGTGGTGGAGGTGGTG---------------------------------------------------------------------------------------------------------GTGGGTTGTT---------GC---------ATGGCGGAGGCGGTGGTGGA---------GG---------AGGAGGTGGAGGT------G------GTGGT------G--------------------------------------------------------------------GAGGAGGAGGTGGAGGTGGTGGTGGTGGTGGAGGTGGTGGTGGTGTTGTTCATGGCGGAGGCGGTGGTGGAG------------------------------GA---GGAGGAGGAGGCGGTGGTGGT
dp5	4_group4:2894090-2894273 -		CTATGG---------AAGACCAGGATT---------------------------------------TGGAGG------------AGGCCCTGG---CTTTGGAGGCGGTTTCGGAGGTGGTCC------------G------------------------------------------------------------------------------------GGCTATGGCGGCTTTG---------------------GA------------------------GG---------TGGGCCTGGATAT------G------GCGGA------TTCGGCG----GGAGCC----------------------------------CG---------------------TATGGAGGCTTT------------------------GGAGGCGGTGGT---GG------------------------TCGTCGTCGTCATGGCGGCGGC---GGCGGCGGAGGTGGAGGTGGT
droPer2	scaffold_0:7041332-7041535 -		TGGAGG---------AGGCGGTGGTGG---------------------------------------------------------TGGTGGCGGTGGTGGTGGCGGTGGCGGCGGCGGTATACC---------------------------------------------------------------------------------------------------------------------------------------AGCCGGATT-GA---AGG-------------------GATTCCAAAG-------------------------------------GGTGTGGCTGCCAAAGTGGCTGCAGCTGCTGCAGGAG---GAGGTCTCAAGG---------------------GACCACTAT---CATCAGTAGGTCGTGGAGGAGTGGGA---GGCGGAGGAGCAGGAG------------------------------GC---GGAGGAGGAGGACGGGGCGGA
droAna3	scaffold_13340:1987090-1987288 -		CTTCGG---------AGGACCTGGAGG---------------------------------------------------------TGGTTTTGGAGGACCTGGAGGTGGTTTCGGAGGTGGTTT------------------------------------------------------------------------------------------------------CGGAGGACCTG---------------------GA------------------------GG---------TGGCTTCGGAGGACCAGGAG------GTGGC------TTTGGCG-----------------------------------------------------------GAGGCGGCTTTGGACGCCCTGGAGGTG---GATTCGGAGGCCCTGGAGGTGGCTTC---GGAGGAGGTTTTGGTG---------------------------GCCCT---GGAGGAGGTTTCGGAGGAGGC
droBip1	scf7180000396572:2443215-2443437 +		ACACGG---------AGGACCTGGTGG---------------------------------------------------------AGGTGG---ACACTTTGGTGGCGGCT---------------------------------------------TAAGCGGAGGTG---G---TAAACATAAAGGCCACGGAGG------------------------------CGGCGGCTTTGGAGGCGGTC---------CTGGCGGAGGCTTTGGA------------GG---------AGGTCATGGAGGA---GGTG------GCGGC------TTTGGAG----GAGGCG----------------------------------GCTATGGAGGCAGTCCTGGAGG------------------------------------CGGAGGCGGCTAT---GGAGGCGGTCCTGGAG------------------------------GC---GGTGGCGGCTATGGAGGTGGT
droKik1	scf7180000302311:4355-4529 -		TCCGGCCAAAAGAGGTCGCTTCGATAA---------------------------------------------------------CGGCGGCGGA------------GGCGG------TG---G------------TGGACGCTT---------------------------------------------------------------------------------CGG---GAACA---------------------GAGGTGGCTATGG---AAATCAGGGAAACAGCAGCTATGGTCGTGGCGGG---CGTC------GCAAC------TATGGCG-----------------------------------------GTG------------------A---------------------------------------------AGGTTTC---GGTAATTATGGAGGAG------------------------------GT---TTTGGAAATAATGGAGGTGGT
droFic1	scf7180000453879:67577-67766 +		TGGCTT---------TGGAACTGGTCG------------------------------------------AGGAAGATATGGAAATAGTAGAGGA------------GGATA---------------------CGGAAACAACTTT---------------------------------------------------------------------------GGATATGGAAATA---------------------ATGGA------------------------GG---------AGGGTACGGAAAT---------------------------AAT-G---GAGGAG----------------------------------GG---------------------TATGGAAATAATGGAGGAG---GGTATGGAAATAATGGAGGAGGATAT---GATAATGCTGGAGGAG------------------------------GC---TACGGAGGTAATGGAGGGGGA
droEle1	scf7180000491047:1762262-1762445 +		CTTCGG---------AGGTCCTGGAGG---------------------------------------------------------CGGCTTCGGAGGTCCTGGAGGCGGTGGCT---------T------------------------------------------------------------------------------------------------------CGGCGGCC---------------------CTGGAGGCGGTTTCGG---AGGTCCGGGAGG---------CGGTTTCGGCGGTCCAGGAG------GCGGA------TTTGGAG-----------------------------------------GCG------------------GTGGCTTCGGAGGTCCT------------------------GGAGGCGGCTTC---GGAGGTCCTGGAGGAG------------------------------GC---TTCGGAGGTCCTGGA---GGC
droRho1	scf7180000778271:115762-115848 -		TTCAAT---------TGGCGGTGGTTC---------------------------------------------------------CATTGGAG------------GTGGAT---------------------------------------------CC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGGCGGTGGCATC---AATTCCGGTCTGAGTG------------------------------GT---TTTGGAGGTCTGGGAGGTGG-
droBia1	scf7180000302126:2096120-2096209 -		CGGAGG---------CGGAAGTGGTGG---------------------------------------------------------TGGTGGCCGCGGCAGAGGTGGTAGTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G---------------------------------------------TGGCCGA---GGCGGAGGTGGTGGCG------------------------------GT---GCTGGAGGTGCTGGAGGCGG-
droTak1	scf7180000410408:64533-64746 -		TCCTGG---------AATCGGA---GGTGGAATT------GG------------------------T---GG------------CGGAGCCGGTGG---------------------------------------CGGACACTTTGGAGGTGGACTTAGCGGAGGTCACGGCCACAAGCA---------------------------------------------CGGAGGCCATG---------------------GA------------------------GG---------CGGTGGCGGATAC---AAAG------GCGGA------TCTGGT-----------------------------------------------------------------GGTGGCGGAGGATTTGGCGGCG---GTGGTGGAGGCGGCGGCGGTGGCTAC---GGAGGTGGTCCTGGAG------------------------------GC---GGTGGTGGCTACGGAGGCGGA
droEug1	scf7180000409554:4218179-4218388 +		CTCACT---------TGGAGGTGGCGG------------------------------------------------------------------ACAC------------------------------------------------------------------------AAGCATAAGCACGGTGGCCATGGAGGTGCAGGCGGATATGGAGGCGGCGGCGGAGGTGGATTT---------------------------------------------------------------------GGAGGC---------------------------GGT-GGCGGCGGTG----------------------------------GCTACGGAGGTAAACCTGGCGGTAGTGGTGGCTACGGAGGTG---------------------------------------GTCCAGGCGGCGGCGGTGGCTACGGAGGCAGTGGTGGCGGTGGCTACGGAGGCAGTGGTGGCGG-
dm3	chr2R:1862737-1862944 -		ATATGG---------AAATAATGGAGG---------------------------------------------------------AGGATATGGAAATATTGGAGGAGGATATGGAAATAATGCAGGAGGTTATGGA------------------------------------------------------------------------------------------------AATAATGGTGGATATGGAAATAATGGC------------------------------------------------------G------GAGGT------TATAGA-----------------------------AATAATG------GTG------------------GAGGATATGGAAACAATGGCGGAG---GATATGGGAACAAGAGAGGTGGATTT---GGAGACTCATTTGAAA------------------------------GC---AATAGAGGATCAGGCGGCGGC
droSim2	2r:2815795-2816005 -		TACAGG---------ACGCTTCAGTAACAGCAGC---TTTGGTCGCCGTGGAAACGGCAGAACCTTTGGAGGAGGGTATGGAAATAATGGAGGA------------GGATATGGAAGTAA---------------------------------------------------------------------------------------------------------------------------------------TGGT------------------------GG---------AGGATATGGAAAT---------------------------AAT-G---GGGGAG----------------------------------GATATAGAAATAATGCAGTAGGTT------------------------ATGGAAATACTGGTGGAGGATAT---GGAAACCATGGCGGAG------------------------------GT---TATGGAAATAATGGTGGACGA
droSec2	scaffold_26:507939-508095 -		TGGAGG---------AGGGTATGGAAA---------------------------------------------------------TAATGGAGGA------------GGATATGGAAGTAA---------------------------------------------------------------------------------------------------------------------------------------TGGT------------------------GG---------AGGATATGGAAAT---------------------------AAT-G---GGGGAG----------------------------------GATATAGAAATAATGCAGTAGGTTATGGAAATTCT------------------------GGTGGAGGATAT---GGAAACCATGGCGGAG------------------------------GT---TATGGAAATAATGGTGGAGGA
droYak3	2L:7097378-7097569 -		CGTAAT---------AGGT------GGCGGTCCTGGA---TT------------------------C---GGAGGAGGTGACTATTCTGGAGGA------------GGAGG---------------------CGGT---------------------------------------------------------------------------------------ATCGGCGGCGGAG---------GTGGCCATTCTGGT------------------------------------------------------GGAG------GCGGTGGAATCG-----------------------------------------------------------------GCGGCGCCGGAAGCTCTGCATCATCTTCAGTTGGAGTTATTGGCGGAGGTCAC---GGCGGCGGAAAACAAG------------------------------GC---GGCGGAGGTCACGGCGGCGG-
droEre2	scaffold_4845:6964314-6964500 -		CAGAGG---------AGGATATGGAAA---------------------------------------------------------CGGTATGGGTGGAAATGGAAGGGGTCCTGGAGGAA---T---------GGGT------------------------------------------------------------------------------------GGTAATGGAATG---------------------------------------------------------------GGTCCTGGGGGAA----------------------------------TGGGTG----------------------------------GTAACGGCATGGGTCCCGGAGGAATGGGTGGTAATGGAATGG---------------------------------------GTCCTGGAGGAATGGGTGGCTATAACGGTCGAG------GC---GTACCAAACGGAATGGGTGGA

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droMoj3

TTCAGG---------AGGTAATGGAGG---------------------------------------------------------TGGCTCTGGATGTAATGGAGGTGGTTCCGGAGGTAA------------TGGA------------------------------------------------------------------------------------TGTAATGGATGTATAT---------------------GA------------------------GG---------TGCTTCTGGATGT------AATGGAGGTGGT------TCAG-----------------------------------------------------------------GAGGTAATGGATGTAATGGAGTTG---GCTCTGGATGTATAGGAGGTGATTAC---GGAGGTGGTTCAGGAG------------------------------GT---AATGGAGGTAATGGAGGTGGC	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
....................................................................................................................................TGGA------------------------------------------------------------------------------------TGTAATGGATGTATAT---------------------GA------------------------GG---------TGCT......................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	1
.......................................................................................................................................A------------------------------------------------------------------------------------TGTAATGGATGTATAT---------------------GA------------------------GG---------TGCTTCT...................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	1
............................................................................................................................................................................................................................TGTAATGGATGTATAT---------------------GA------------------------GG---------T.........................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	1
................................................................................................................................................................................................................................................................................................................................GTGGT------TCAG-----------------------------------------------------------------GAGGTAATGGATGTAAT...............................................................................................................	26	1	1.00	1	0	0	0	0	0	1
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGGTGATTAC---GGAGGTGG................................................................	21	1	1.00	1	0	0	0	0	0	1
............................................................................................GATGTAATGGAGGTGGTTC.................................................................................................................................................................................................................................................................................................................................................................................................................................	19	2	0.50	1	0	0	0	0	0	1
..............................................................................................................................................................................................................................................................................................................GATGT------AATGGAGGTGGT------TC...................................................................................................................................................................................................	19	2	0.50	1	0	0	0	0	0	1
..........................................................................................................................................................................................................................................................................................................TCTGGATGT------AATGGAGGTGGT------TC...................................................................................................................................................................................................	23	2	0.50	1	0	0	0	0	0	1
........................................................................................TCTGGATGTAATGGAGGTGGTTC.................................................................................................................................................................................................................................................................................................................................................................................................................................	23	2	0.50	1	0	0	0	0	0	1
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTTCAGGAG------------------------------GT---AATGGAG..............	22	2	0.50	1	0	0	0	0	0	1
....................................................................................................................................................................................................................................................................................................................................................................................................................................GTTG---GCTCTGGATGTATAGGAGG..................................................................................	23	3	0.33	1	0	0	0	0	0	1
.......................................................................................................................................................................................................................................................................................................................................................................................................................TGGATGTAATGGAGTTG---GCTCTGGA.............................................................................................	25	3	0.33	1	0	0	0	0	0	1
...........................................................................................................................................................................................................................................................................................................................TGGAGGTGGT------TCAG-----------------------------------------------------------------GAGGTAAT........................................................................................................................	22	3	0.33	1	0	0	0	0	0	1
..........................................................................................................................................................................................................................................................................................................TCTGGATGT------AATGGAGGTGG............................................................................................................................................................................................................	20	4	0.25	1	0	0	0	0	0	1
........................................................................................TCTGGATGTAATGGAGGTGG....................................................................................................................................................................................................................................................................................................................................................................................................................................	20	4	0.25	1	0	0	0	0	0	1
.............................................................................................................................................................................................................................................................................................................................................AG-----------------------------------------------------------------GAGGTAATGGATGTAATGGAT...........................................................................................................	23	4	0.25	1	0	0	0	0	0	1
.......................................................................................................................................................................................................................................................................................................................................................................................................................................G---GCTCTGGATGTATAGGAGGT.................................................................................	21	4	0.25	1	0	0	0	0	0	1
..................................................................................................................................................................................................................................................................................................................................GGT------TCAG-----------------------------------------------------------------GAGGTAATGGATGT..................................................................................................................	21	5	0.20	1	0	0	0	0	0	1
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTTCAGGAG------------------------------GT---AATGGA...............	21	7	0.14	1	0	0	0	0	0	1
...............................................................................................................................................................................................................................................................................................................................GGTGGT------TCAG-----------------------------------------------------------------GAGGTAATGGA.....................................................................................................................	21	7	0.14	1	0	0	0	0	0	1
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTTCAGGAG------------------------------GT---AATG.................	19	7	0.14	1	0	0	0	0	0	1
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTTCAGGAG------------------------------GT---AATGG................	20	7	0.14	1	0	0	0	0	0	1
...............................................................................................................................................................................................................................................................................................................................GGTGGT------TCAG-----------------------------------------------------------------GAGGTAATGG......................................................................................................................	20	7	0.14	1	0	0	0	0	0	1
...............................................................................................................................................................................................................................................................................................................................GGTGGT------TCAG-----------------------------------------------------------------GAGGTAATG.......................................................................................................................	19	7	0.14	1	0	0	0	0	0	1
...............................................................................................................................................................................................................................................................................................................................GGTGGT------TCAG-----------------------------------------------------------------GAGGTAAT........................................................................................................................	18	7	0.14	1	0	0	0	0	0	1
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTTCAGGAG------------------------------GT---AAT..................	18	7	0.14	1	0	0	0	0	0	1

droVir3

TGCTGG---------AGGTGGTGCGGG---AGGA------GG------------------------T---GCTGGAGCTGGAGGCTACGGTGGA------------GGAGCAGGAGCTGG------------CGGA------------------------------------------------------------------------------------GCTGGTGGATT------------------------TGGTGGTGGCGC---------------------------AGGTCGTGGAGGC------------------------GCTGGA-----------------------------GGTGGTGCTG------------------------GAGGAGGCGCTGGAGGTGGTGCTG---------------GAGCTGGAGGTTAC---GGTGGAGGCGCAGGTG------------------------------CT---GGTGGAGCTGGTGGATTTGGT	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAC---GGTGGAGGCGCAGGTG------------------------------CT---.....................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
................GGTGGTGCGGG---AGGA------GG------------------------T---..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	2	0.50	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0

droGri2

AGCTGG---------AGGTTATGGAGG---------------------------------------------------------TGGCGCCGGAGGTGCTGGGGGCGCTGGTGGTGCAGGAGC------------------------------------------------------------------------------------------------------TGGAGGTTATG---------------------GA------------------------GG---------TGGCGCTGGAGGTGCCGGTCGTG------GTGGAGGCGCTG-----------------------------------------------------------------GTGGTGCTGGAGGCTATGGTGGAGGCGCGGGAGGTGCTGGAGCTGGAGGTTAT---GGAGGTGGCGCCGGAG---------------------------GTGCT---GGAGGCGCTGGTGGTGCAGGA	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
No Reads

droWil2

TGGAGG---------TGGTGGTGGAGG---------------------------------------------------------AGGAGGTGGAGGTGGTGGTGGTGGTGGAGGTGGTG---------------------------------------------------------------------------------------------------------GTGGGTTGTT---------GC---------ATGGCGGAGGCGGTGGTGGA---------GG---------AGGAGGTGGAGGT------G------GTGGT------G--------------------------------------------------------------------GAGGAGGAGGTGGAGGTGGTGGTGGTGGTGGAGGTGGTGGTGGTGTTGTTCATGGCGGAGGCGGTGGTGGAG------------------------------GA---GGAGGAGGAGGCGGTGGTGGT	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
..................................................................................................GTGGTGGTGGTGGAGGTGGTG---------------------------------------------------------------------------------------------------------GTGGG...........................................................................................................................................................................................................................................................................................................	26	1	9.00	9	0	1	8	0	0
...............................................................................................GTGGTGGTGGTGGTGGAGGTGGTG---------------------------------------------------------------------------------------------------------G...............................................................................................................................................................................................................................................................................................................	25	4	5.25	21	0	1	5	1	14
...............................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTGGTGGTGGTGGAGGTGGTGG........................................................................................	25	4	5.25	21	0	1	5	1	14
....................................................................................................GGTGGTGGTGGAGGTGGTG---------------------------------------------------------------------------------------------------------GTGGG...........................................................................................................................................................................................................................................................................................................	24	1	4.00	4	0	1	1	0	2
....................................................................................................................................................................................................................................................................GAGGCGGTGGTGGA---------GG---------AGGAGGTGGAG...............................................................................................................................................................................................................................	27	1	4.00	4	0	0	4	0	0
............................................................................................................................................................................................................................................................................................G---------AGGAGGTGGAGGT------G------GTGGT------G--------------------------------------------------------------------GAGGA...........................................................................................................................	26	1	3.00	3	0	1	2	0	0
....................................................................................................................................................................................................................................................................GAGGCGGTGGTGGA---------GG---------AGGAGGTGGA................................................................................................................................................................................................................................	26	1	3.00	3	0	1	2	0	0
..GAGG---------TGGTGGTGGAGG---------------------------------------------------------AGGAGGTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	2	2.50	5	0	2	1	0	2
..............................................................................................................................................................................................................................................................................................................GAGGT------G------GTGGT------G--------------------------------------------------------------------GAGGAGGAGGTGG...................................................................................................................	25	2	2.50	5	0	2	1	0	2
..................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTGGTGGTGGAGGTGGTGGTGG.....................................................................................	25	4	2.25	9	0	0	3	1	5
..................................................................................................GTGGTGGTGGTGGAGGTGGTG---------------------------------------------------------------------------------------------------------GTGG............................................................................................................................................................................................................................................................................................................	25	4	2.25	9	0	0	3	1	5
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTGGAG------------------------------GA---GGAGGAGGAGGCGGTG.....	27	1	2.00	2	0	0	2	0	0
..........................................................................................................................................................................................................................................................................GTGGTGGA---------GG---------AGGAGGTGGAGGT------G------................................................................................................................................................................................................................	24	3	2.00	6	0	1	0	0	5
................................................................................................................................................................................................................................................................................................................................GTGGT------G--------------------------------------------------------------------GAGGAGGAGGTGGAGGTG..............................................................................................................	24	3	2.00	6	0	1	0	0	5
.................GTGGTGGAGG---------------------------------------------------------AGGAGGTGGAGGTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................	24	3	2.00	6	0	1	0	0	5
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGCGGTGGTGGAG------------------------------GA---GGAGGAGGAG...........	27	1	2.00	2	0	0	2	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGTGGTGGAG------------------------------GA---GGAGGAGGAGG..........	25	1	2.00	2	0	2	0	0	0
....................................................................................................GGTGGTGGTGGAGGTGGTG---------------------------------------------------------------------------------------------------------GTGGGT..........................................................................................................................................................................................................................................................................................................	25	1	2.00	2	0	0	1	0	1
..................................................................................................GTGGTGGTGGTGGAGGTGGTG---------------------------------------------------------------------------------------------------------GTGGGT..........................................................................................................................................................................................................................................................................................................	27	1	2.00	2	0	0	2	0	0
............................................................................................................................................................................................................................................................................................G---------AGGAGGTGGAGGT------G------GTGGT------G--------------------------------------------------------------------GAGG............................................................................................................................	25	1	2.00	2	0	0	1	0	1
.................................................................................................................................................................................................................................................................GCGGAGGCGGTGGTGGA---------GG---------AGGAGGTG..................................................................................................................................................................................................................................	27	1	2.00	2	0	0	2	0	0
...................GGTGGAGG---------------------------------------------------------AGGAGGTGGAGGTGGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................	25	3	1.67	5	0	1	2	0	2
..................................................................................................................................................................................................................................................................................................................................GGT------G--------------------------------------------------------------------GAGGAGGAGGTGGAGGTGGTG...........................................................................................................	25	3	1.67	5	0	1	2	0	2
................................................................................................................................................................................................................................................................................................................................GTGGT------G--------------------------------------------------------------------GAGGAGGAGGTGGAGGTGGTG...........................................................................................................	27	3	1.67	5	0	0	5	0	0
............................................................................................................................................................................................................................................................................GGTGGA---------GG---------AGGAGGTGGAGGT------G------GTG.............................................................................................................................................................................................................	25	3	1.67	5	0	1	2	0	2
..........................................................................................................................................................................................................................................................................GTGGTGGA---------GG---------AGGAGGTGGAGGT------G------GTG.............................................................................................................................................................................................................	27	3	1.67	5	0	0	5	0	0
.................GTGGTGGAGG---------------------------------------------------------AGGAGGTGGAGGTGGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................	27	3	1.67	5	0	0	5	0	0
..GAGG---------TGGTGGTGGAGG---------------------------------------------------------AGGAGGTGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	2	1.50	3	0	0	3	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGGTGGAGGTGGTGGTGGTGGT...................................................................................................	26	2	1.50	3	0	1	2	0	0
..............................................................................................................................................................................................................................................................................................................GAGGT------G------GTGGT------G--------------------------------------------------------------------GAGGAGGAGGTGGA..................................................................................................................	26	2	1.50	3	0	0	3	0	0
..........................G---------------------------------------------------------AGGAGGTGGAGGTGGTGGTGGTGGT...................................................................................................................................................................................................................................................................................................................................................................................................................................	26	2	1.50	3	0	1	2	0	0
...................................................................................................................................................................................................................................................................................................................................GT------G--------------------------------------------------------------------GAGGAGGAGGTGGAGGTGGTGGT.........................................................................................................	26	3	1.33	4	0	0	4	0	0
.................GTGGTGGAGG---------------------------------------------------------AGGAGGTGGAGGTGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................	25	3	1.33	4	0	0	3	0	1
.................GTGGTGGAGG---------------------------------------------------------AGGAGGTGGAGGTGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................	26	3	1.33	4	0	1	2	0	1
..................................................................................................................................................................................................................................................................................................................................GGT------G--------------------------------------------------------------------GAGGAGGAGGTGGAGGTGGT............................................................................................................	24	3	1.33	4	0	0	3	0	1
....................GTGGAGG---------------------------------------------------------AGGAGGTGGAGGTGGTGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................	26	3	1.33	4	0	0	4	0	0
..........................................................................................................................................................................................................................................................................GTGGTGGA---------GG---------AGGAGGTGGAGGT------G------GT..............................................................................................................................................................................................................	26	3	1.33	4	0	1	2	0	1
............................................................................................................................................................................................................................................................................................................................................................................................................................GAGGTGGTGGTGGTGGTGGAGGTGG...........................................................................................	25	3	1.33	4	0	2	1	0	1
..........................................................................................................................................................................................................................................................................GTGGTGGA---------GG---------AGGAGGTGGAGGT------G------G...............................................................................................................................................................................................................	25	3	1.33	4	0	0	3	0	1
............................................................................................................................................................................................................................................................................GGTGGA---------GG---------AGGAGGTGGAGGT------G------GT..............................................................................................................................................................................................................	24	3	1.33	4	0	0	3	0	1
...................GGTGGAGG---------------------------------------------------------AGGAGGTGGAGGTGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................	24	3	1.33	4	0	0	3	0	1
.............................................................................................................................................................................................................................................................................GTGGA---------GG---------AGGAGGTGGAGGT------G------GTGGT------.....................................................................................................................................................................................................	26	3	1.33	4	0	0	4	0	0
............................................................................................GAGGTGGTGGTGGTGGTGGAGGTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................	25	3	1.33	4	0	2	1	0	1
................................................................................................................................................................................................................................................................................................................................GTGGT------G--------------------------------------------------------------------GAGGAGGAGGTGGAGGTGG.............................................................................................................	25	3	1.33	4	0	0	3	0	1
................................................................................................................................................................................................................................................................................................................................GTGGT------G--------------------------------------------------------------------GAGGAGGAGGTGGAGGTGGT............................................................................................................	26	3	1.33	4	0	1	2	0	1
.........................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGGTGGTGGTGGTGGTGGAGG..............................................................................................	25	3	1.00	3	0	0	1	0	2
.......................................................................................................GGTGGTGGAGGTGGTG---------------------------------------------------------------------------------------------------------GTGGG...........................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0
....................................................................................................................................................................................................................................................................GAGGCGGTGGTGGA---------GG---------AGGAGGTGG.................................................................................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0
.....G---------TGGTGGTGGAGG---------------------------------------------------------AGGAGGTGGAGG................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	2	1.00	2	0	0	2	0	0
...............................................................................................................................................................................................................................................................TGGCGGAGGCGGTGGTGGA---------GG---------AGGAG.....................................................................................................................................................................................................................................	26	2	1.00	2	0	1	1	0	0
................................................................................................................................................................................................................................................................GGCGGAGGCGGTGGTGGA---------GG---------AGGA......................................................................................................................................................................................................................................	24	2	1.00	2	0	2	0	0	0
........................................................................................................................................................................................................................................................................CGGTGGTGGA---------GG---------AGGAGGTGGAGGT------G------................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	1
........................................................................................................GTGGTGGAGGTGGTG---------------------------------------------------------------------------------------------------------GTGGGTTG........................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	1
......................................................................................................................................................................................................................................................................GGCGGTGGTGGA---------GG---------AGGAGGTGGA................................................................................................................................................................................................................................	24	1	1.00	1	0	0	1	0	0
............................................................................................GAGGTGGTGGTGGTGGTGGAGGTGGT..........................................................................................................................................................................................................................................................................................................................................................................................................................	26	2	1.00	2	0	1	1	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGAGGCGGTGGTGGAG------------------------------GA---GGAGGA...............	26	1	1.00	1	0	1	0	0	0
.................................................................................................................................................................................................................................................................................................................GT------G------GTGGT------G--------------------------------------------------------------------GAGGAGGAGGTGGAGGTGG.............................................................................................................	28	2	1.00	2	0	0	2	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCGGTGGTGGAG------------------------------GA---GGAGGAGGA............	25	1	1.00	1	0	0	1	0	0
......................................................................................GAGGTGGAGGTGGTGGTGGTGGTGGA................................................................................................................................................................................................................................................................................................................................................................................................................................	26	2	1.00	2	0	0	1	0	1
............................................................................................................................................................................................................................................................................................................................................................................................................................GAGGTGGTGGTGGTGGTGGAGGTG............................................................................................	24	3	1.00	3	0	0	0	0	3
...............................................................................................................................................................................................................................................................................................................AGGT------G------GTGGT------G--------------------------------------------------------------------GAGGAGGAGGTGGAG.................................................................................................................	26	2	1.00	2	0	0	2	0	0
.........................................................................................................................................................................................................................................T---------GC---------ATGGCGGAGGCGGTGGTGG...............................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	1
............................................................................................GAGGTGGTGGTGGTGGTGGAGGTG............................................................................................................................................................................................................................................................................................................................................................................................................................	24	3	1.00	3	0	0	0	0	3
......................................................................................................................................................................................................................................................................................................AGGAGGTGGAGGT------G------GTGGT------G--------------------------------------------------------------------GAGGAG..........................................................................................................................	26	1	1.00	1	0	0	1	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAG------------------------------GA---GGAGGAGGAGGCGGTGGTGG.	25	1	1.00	1	0	0	1	0	0
.......................................................................................................................................................................................................................................................................GCGGTGGTGGA---------GG---------AGGAGGTGGAGGT------G------G...............................................................................................................................................................................................................	28	1	1.00	1	0	0	1	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGGTGGAGGTGGTGGTGGTGG....................................................................................................	25	2	1.00	2	0	0	2	0	0
.......................................................................................................................................................................................................................................................................GCGGTGGTGGA---------GG---------AGGAGGTGGAGG..............................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGGAGGCGGTGGTGGAG------------------------------GA---GGA..................	24	2	1.00	2	0	2	0	0	0
............................................................................................................................................................................................................................................................................................G---------AGGAGGTGGAGGT------G------GTGGT------G--------------------------------------------------------------------GAGGAG..........................................................................................................................	27	1	1.00	1	0	0	1	0	0
.....................................................................................................................................................................................................................................................................AGGCGGTGGTGGA---------GG---------AGGAGGTGA.................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	1
.............................................................................................................................................................................................................................................................................................................GGAGGT------G------GTGGT------G--------------------------------------------------------------------GAGGAGGAGGTG....................................................................................................................	25	2	1.00	2	0	1	0	0	1
.......................................................................................................GGTGGTGGAGGTGGTG---------------------------------------------------------------------------------------------------------GTGGGTTG........................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	1
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------------------------------GA---GGAGGAGGAGGCGGTGGTGGT	24	1	1.00	1	0	0	0	0	1
.....................................................................................................GTGGTGGTGGAGGTGGTG---------------------------------------------------------------------------------------------------------GTGGG...........................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0
........................................................................................................................................................................................................................................................................CGGTGGTGGA---------GG---------AGGAGGTGGAGGT------G------G...............................................................................................................................................................................................................	27	1	1.00	1	0	0	1	0	0
.GGAGG---------TGGTGGTGGAGG---------------------------------------------------------AGGAGGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	2	1.00	2	0	1	0	0	1
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAG------------------------------GA---GGAGGAGGAGGCGGTGG....	25	1	1.00	1	0	0	1	0	0
................................................................................................................................................................................................................................................................................GA---------GG---------AGGAGGTGGAGGT------G------GTGGT------G--------------------------------------------------------------------GA..............................................................................................................................	26	1	1.00	1	0	0	1	0	0
............................................................................................................TGGAGGTGGTG---------------------------------------------------------------------------------------------------------GTGGGTTG........................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1
...AGG---------TGGTGGTGGAGG---------------------------------------------------------AGGAGGTGGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	2	1.00	2	0	0	2	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................GAGGTGGAGGTGGTGGTGGTGGTGG.................................................................................................	25	2	1.00	2	0	0	1	0	1
................................................................................................................GGTGGTG---------------------------------------------------------------------------------------------------------GTGGGTTGTT---------GC---------ATGG..............................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	1	0
.................................................................................................GGTGGTGGTGGTGGAGGTGGTG---------------------------------------------------------------------------------------------------------GT..............................................................................................................................................................................................................................................................................................................	24	4	1.00	4	0	0	0	0	4
......................................................................................GAGGTGGAGGTGGTGGTGGTGGTGG.................................................................................................................................................................................................................................................................................................................................................................................................................................	25	2	1.00	2	0	0	1	0	1
....................................................................................AGGAGGTGGAGGTGGTGGTGGTGGT...................................................................................................................................................................................................................................................................................................................................................................................................................................	25	2	1.00	2	0	0	2	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGGTGGAGGTGGTGGTGGTGGT...................................................................................................	25	2	1.00	2	0	0	2	0	0
.....G---------TGGTGGTGGAGG---------------------------------------------------------AGGAGGTGGAGGTGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................	28	2	1.00	2	0	0	2	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................GAGGTGGAGGTGGTGGTGGTGGTGGA................................................................................................	26	2	1.00	2	0	0	1	0	1
..........................G---------------------------------------------------------AGGAGGTGGAGGTGGTGGTGGTGG....................................................................................................................................................................................................................................................................................................................................................................................................................................	25	2	1.00	2	0	0	2	0	0
.........................................................................................GTGGAGGTGGTGGTGGTGGTGGAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................	25	3	1.00	3	0	0	1	0	2
.....................................................................................................................................................................................................................................................................AGGCGGTGGTGGA---------GG---------AGGAGGTGG.................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	1
.................................................................................................................................................................................................................................................................................................................GT------G------GTGGT------G--------------------------------------------------------------------GAGGAGGAGGTGGAGG................................................................................................................	25	2	1.00	2	0	0	2	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGTGGTGGAG------------------------------GA---GGAGGAGGAGGCG........	27	1	1.00	1	0	0	1	0	0
............................................................................................................................................................................................................................................................................................G---------AGGAGGTGGAGGT------G------GTGGT------G--------------------------------------------------------------------GA..............................................................................................................................	23	1	1.00	1	0	0	0	1	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGAG------------------------------GA---GGAGGAGGAGGCGGTGG....	26	1	1.00	1	0	0	1	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................GAGGTGGTGGTGGTGGTGGAGGTGGT..........................................................................................	26	2	1.00	2	0	1	1	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGCGGTGGTGGAG------------------------------GA---GGAGGAGGA............	26	1	1.00	1	0	0	1	0	0
.........................................................................................................................................................................................................................................T---------GC---------ATGGCGGAGGCGGTGGT.................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	1
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCGGAGGCGGTGGTGGAG------------------------------GA---GGAG.................	26	2	1.00	2	0	1	1	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG------------------------------GA---GGAGGAGGAGGCGGTGGT...	22	1	1.00	1	0	0	0	0	1
.................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTGGTGGTGGAGGTGGTGGT.......................................................................................	24	4	1.00	4	0	0	0	0	4
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTGGAG------------------------------GA---GGAGGAGGAGGC.........	24	3	1.00	3	0	0	2	0	1
...............................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTGGTGGTGGTGGAGGTGGTGGT.......................................................................................	26	3	0.67	2	0	0	1	0	1
...................................................................................................................................................................................................................................................................................................................................GT------G--------------------------------------------------------------------GAGGAGGAGGTGGAGGTGGT............................................................................................................	23	3	0.67	2	0	1	0	0	1
.........................................................................................................................................................................................................................................................................................................................G------GTGGT------G--------------------------------------------------------------------GAGGAGGAGGTGGAGGTG..............................................................................................................	25	3	0.67	2	0	0	2	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTGGTGGTGGTGGAGGTGGTGGTG......................................................................................	27	3	0.67	2	0	0	2	0	0
.........................................................................................................................................................................................................................................................................GGTGGTGGA---------GG---------AGGAGGTGGAGGT------G------................................................................................................................................................................................................................	25	3	0.67	2	0	0	2	0	0
....................GTGGAGG---------------------------------------------------------AGGAGGTGGAGGTGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................	23	3	0.67	2	0	1	0	0	1
.............................................................................................................................................................................................................................................................................GTGGA---------GG---------AGGAGGTGGAGGT------G------GT..............................................................................................................................................................................................................	23	3	0.67	2	0	1	0	0	1
...............................................................................................GTGGTGGTGGTGGTGGAGGTGGTG---------------------------------------------------------------------------------------------------------GT..............................................................................................................................................................................................................................................................................................................	26	3	0.67	2	0	0	1	0	1
................GGTGGTGGAGG---------------------------------------------------------AGGAGGTGGAGGTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................	25	3	0.67	2	0	0	2	0	0
...............................................................................................GTGGTGGTGGTGGTGGAGGTGGTG---------------------------------------------------------------------------------------------------------GTG.............................................................................................................................................................................................................................................................................................................	27	3	0.67	2	0	0	2	0	0
...........................................................................................................................................................................................................................................................................................................GTGGAGGT------G------GTGGT------G--------------------------------------------------------------------GAGGAGGAGG......................................................................................................................	25	3	0.67	2	0	0	2	0	0
....................................................................................................GGTGGTGGTGGAGGTGGTG---------------------------------------------------------------------------------------------------------GTGG............................................................................................................................................................................................................................................................................................................	23	5	0.60	3	0	1	1	0	1
....................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTGGTGGAGGTGGTGGTGG.....................................................................................	23	5	0.60	3	0	1	1	0	1
.................................................................................................GGTGGTGGTGGTGGAGGTGGTG---------------------------------------------------------------------------------------------------------G...............................................................................................................................................................................................................................................................................................................	23	7	0.57	4	0	0	0	0	4
.................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTGGTGGTGGAGGTGGTGG........................................................................................	23	7	0.57	4	0	0	0	0	4
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCGGAGGCGGTGGTGGAG------------------------------GA---GGAG.................	27	2	0.50	1	0	0	1	0	0
.............................................................................................AGGTGGTGGTGGTGGTGGAGGTGGTG---------------------------------------------------------------------------------------------------------................................................................................................................................................................................................................................................................................................................	26	2	0.50	1	0	0	1	0	0
..GAGG---------TGGTGGTGGAGG---------------------------------------------------------AGGAGGTGGAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	2	0.50	1	0	0	1	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCGGAGGCGGTGGTGGAG------------------------------GA---GGA..................	26	2	0.50	1	0	0	1	0	0
............................................................................................................................................................................................................................................................................................................TGGAGGT------G------GTGGT------G--------------------------------------------------------------------GAGGAGGAGGTG....................................................................................................................	26	2	0.50	1	0	0	1	0	0
..................................................................................................GTGGTGGTGGTGGAGGTGGTG---------------------------------------------------------------------------------------------------------GTGGGA..........................................................................................................................................................................................................................................................................................................	27	2	0.50	1	0	0	1	0	0
...........................................................................................GGAGGTGGTGGTGGTGGTGGAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................	23	4	0.50	2	0	2	0	0	0
..................................................................................................................................................................................................................................................................................................................................GGT------G--------------------------------------------------------------------GAGGAGGAGGTGGAGGTGG.............................................................................................................	23	4	0.50	2	0	0	2	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGTGGAGGTGGTGGTGGT......................................................................................................	21	2	0.50	1	0	0	0	0	1
.......................................................................................................................................................................................................................................................................................................GGAGGTGGAGGT------G------GTGGT------G--------------------------------------------------------------------GAGGA...........................................................................................................................	24	2	0.50	1	0	1	0	0	0
..............................................................................................................................................................................................................................................................ATGGCGGAGGCGGTGGTGGA---------GG---------AGGA......................................................................................................................................................................................................................................	26	2	0.50	1	0	0	1	0	0
..............................................................................................................................................................................................................................................................ATGGCGGAGGCGGTGGTGGA---------GG---------AGGAG.....................................................................................................................................................................................................................................	27	2	0.50	1	0	0	1	0	0
..............................................................................................................................................................................................................................................................................................................GAGGT------G------GTGGT------G--------------------------------------------------------------------GAGGAGGAGGTGGAG.................................................................................................................	27	2	0.50	1	0	0	1	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................AGGTGGTGGTGGTGGTGGAGGTGGTG.........................................................................................	26	2	0.50	1	0	0	1	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTGGTGGTGGAGGTGGTGGTG......................................................................................	24	4	0.50	2	0	0	0	0	2
..............................................................................................................................................................................................................................................................ATGGCGGAGGCGGTGGTGGA---------GG---------AGG.......................................................................................................................................................................................................................................	25	2	0.50	1	0	0	1	0	0
..GAGG---------TGGTGGTGGAGG---------------------------------------------------------AGGAGGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	2	0.50	1	0	0	1	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................GAGGTGGAGGTGGTGGTGGTGGT...................................................................................................	23	2	0.50	1	0	1	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGAGGCGGTGGTGGAG------------------------------GA---GGAG.................	24	2	0.50	1	0	1	0	0	0
..............................................................................................................................................................................................................................................................................................................GAGGT------G------GTGGT------G--------------------------------------------------------------------GAGGAGGAGGTG....................................................................................................................	24	2	0.50	1	0	0	1	0	0
........................................................................................................................................................................................................................................................................................................GAGGTGGAGGT------G------GTGGT------G--------------------------------------------------------------------GAGGAGGA........................................................................................................................	26	2	0.50	1	0	1	0	0	0
............................................................................................................................................................................................................................................................................GGTGGA---------GG---------AGGAGGTGGAGGT------G------G...............................................................................................................................................................................................................	23	4	0.50	2	0	0	2	0	0
.......................................................................................AGGTGGAGGTGGTGGTGGTGGTGGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................	26	2	0.50	1	0	0	1	0	0
TGGAGG---------TGGTGGTGGAGG---------------------------------------------------------AGGAGGTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	2	0.50	1	0	0	1	0	0
.................................................................................................................................................................................................................................................................GCGGAGGCGGTGGTGGA---------GG---------AGGAG.....................................................................................................................................................................................................................................	24	2	0.50	1	0	1	0	0	0
....................................................................................................GGTGGTGGTGGAGGTGGTG---------------------------------------------------------------------------------------------------------GTGGGA..........................................................................................................................................................................................................................................................................................................	25	2	0.50	1	0	0	1	0	0
...................GGTGGAGG---------------------------------------------------------AGGAGGTGGAGGTGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................	23	4	0.50	2	0	0	2	0	0
.....................................................................................GGAGGTGGAGGTGGTGGTGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................	21	2	0.50	1	0	0	0	0	1
............................................................................................................................................................................................................................................................................................................TGGAGGT------G------GTGGT------G--------------------------------------------------------------------GAGGAGGAGGT.....................................................................................................................	25	2	0.50	1	0	0	1	0	0
...........................................................................................................................................................................................................................................................................................................GTGGAGGT------G------GTGGT------G--------------------------------------------------------------------GAGGAGGAGGTG....................................................................................................................	27	2	0.50	1	0	0	1	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGCGGAGGCGGTGGTGGAG------------------------------GA---GG...................	25	2	0.50	1	0	0	1	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................AGGTGGAGGTGGTGGTGGTGGTGGAG...............................................................................................	26	2	0.50	1	0	0	1	0	0
..................................................................................................................................................................................................................................................................................................................T------G------GTGGT------G--------------------------------------------------------------------GAGGAGGAGGTGGAGG................................................................................................................	24	2	0.50	1	0	0	0	0	1
TGGAGG---------TGGTGGTGGAGG---------------------------------------------------------AGGAGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	2	0.50	1	0	0	1	0	0
.......................................................................................................................................................................................................................................................................GCGGTGGTGGA---------GG---------AGGAGGTGGAGGT------A------................................................................................................................................................................................................................	27	2	0.50	1	0	0	1	0	0
....................................................................................AGGAGGTGGAGGTGGTGGTGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................	22	2	0.50	1	0	0	1	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGGCGGTGGTGGAG------------------------------GA---GGAGG................	24	2	0.50	1	0	1	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGAGGCGGTGGTGGAG------------------------------GA---GGAGG................	25	2	0.50	1	0	0	0	0	1
...........................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGTGGTGGTGGTGGTGGAGG..............................................................................................	23	4	0.50	2	0	2	0	0	0
......................................................................................GAGGTGGAGGTGGTGGTGGTGGT...................................................................................................................................................................................................................................................................................................................................................................................................................................	23	2	0.50	1	0	1	0	0	0
..................................................................................................GTGGTGGTGGTGGAGGTGGTG---------------------------------------------------------------------------------------------------------GTG.............................................................................................................................................................................................................................................................................................................	24	4	0.50	2	0	0	0	0	2
..................................................................................................................................................................................................................................................................CGGAGGCGGTGGTGGA---------GG---------AGGAGG....................................................................................................................................................................................................................................	24	2	0.50	1	0	1	0	0	0
.................................................................................................................................................................................................................................................................GCGGAGGCGGTGGTGGA---------GG---------AGGAGG....................................................................................................................................................................................................................................	25	2	0.50	1	0	0	0	0	1
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA---GGAGGAGGAGGCGGTGGTGG.	22	2	0.50	1	0	0	0	0	1
....................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGGTGGAGGTGGTGGTGGT......................................................................................................	22	2	0.50	1	0	0	1	0	0
...............TGGTGGTGGAGG---------------------------------------------------------AGGAGGTGGAGG................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	2	0.50	1	0	0	0	0	1
........................................................................................................................................................................................................................................................................................................GAGGTGGAGGT------G------GTGGT------G--------------------------------------------------------------------G...............................................................................................................................	19	5	0.40	2	0	0	1	0	1
......................................................................................GAGGTGGAGGTGGTGGTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................	19	5	0.40	2	0	0	1	0	1
......................................................................................................................................................................................................................................................................................................................................................................................................................GAGGTGGAGGTGGTGGTGG.......................................................................................................	19	5	0.40	2	0	0	1	0	1
...........................................................................................................................................................................................................................................................................................GG---------AGGAGGTGGAGGT------G------GTGGT------G--------------------------------------------------------------------G...............................................................................................................................	23	3	0.33	1	0	1	0	0	0
.........................GG---------------------------------------------------------AGGAGGTGGAGGTGGTGGTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................	23	3	0.33	1	0	1	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGGTGGTGGTGGTGGTGGAG...............................................................................................	24	3	0.33	1	0	1	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGGTGGAGGTGGTGGTGG.......................................................................................................	22	3	0.33	1	0	1	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTGGAG------------------------------GA---GGAGGAGGAGGCG........	25	3	0.33	1	0	1	0	0	0
................................................................................................................................................................................................................................................................................GA---------GG---------AGGAGGTGGAGGT------G------GTGGT------G--------------------------------------------------------------------G...............................................................................................................................	25	3	0.33	1	0	1	0	0	0
.............................................................................................................................................................................................................................................................................GTGGA---------GG---------AGGAGGTGGAGGT------G------GTGGT------G--------------------------------------------------------------------................................................................................................................................	27	3	0.33	1	0	0	1	0	0
..................................................................................................................................................................................................................................................................CGGAGGCGGTGGTGGA---------GG---------A.........................................................................................................................................................................................................................................	19	3	0.33	1	0	1	0	0	0
................................................................................................................................................................................................................................................................GGCGGAGGCGGTGGTGGA---------GG---------AGG.......................................................................................................................................................................................................................................	23	3	0.33	1	0	0	0	0	1
...........................................................................................................................................................................................................................................................................TGGTGGA---------GG---------AGGAGGTGGAGGT------G------GTG.............................................................................................................................................................................................................	26	3	0.33	1	0	0	0	1	0
...............................................................................................................................................................................................................................................................................................................AGGT------G------GTGGT------G--------------------------------------------------------------------GAGGAGGAGGTGG...................................................................................................................	24	3	0.33	1	0	0	1	0	0
.................................................................................................................................................................................................................................................................................................................................TGGT------G--------------------------------------------------------------------GAGGAGGAGGTGGAGGTGGT............................................................................................................	25	3	0.33	1	0	1	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGAGGCGGTGGTGGAG------------------------------GA---.....................	19	3	0.33	1	0	1	0	0	0
...........................................................................................................................................................................................................................................................................................................GTGGAGGT------G------GTGGT------G--------------------------------------------------------------------GAGGAGGAG.......................................................................................................................	24	3	0.33	1	0	1	0	0	0
.................................................................................................................................................................................................................................................................................................................................TGGT------G--------------------------------------------------------------------GAGGAGGAGGTGGAGGTGG.............................................................................................................	24	3	0.33	1	0	0	0	0	1
..................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGAGGTGGAGGTGGTGGTGG.......................................................................................................	23	3	0.33	1	0	1	0	0	0
.....G---------TGGTGGTGGAGG---------------------------------------------------------AGGAGGTGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	3	0.33	1	0	1	0	0	0
..........................G---------------------------------------------------------AGGAGGTGGAGGTGGTGGTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................	22	3	0.33	1	0	1	0	0	0
.........................................................................................GTGGAGGTGGTGGTGGTGGTGGAGGTG............................................................................................................................................................................................................................................................................................................................................................................................................................	27	3	0.33	1	0	0	1	0	0
..........................................................................................................................................................................................................................................................................................................GGTGGAGGT------G------GTGGT------G--------------------------------------------------------------------GAGGA...........................................................................................................................	21	3	0.33	1	0	1	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGGTGGAGGTGGTGGTGGTGGTA..................................................................................................	27	3	0.33	1	0	0	1	0	0
....GG---------TGGTGGTGGAGG---------------------------------------------------------AGGAGGTGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	3	0.33	1	0	1	0	0	0
.........................................................................................GTGGAGGTGGTGGTGGTGGTGGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................	24	3	0.33	1	0	1	0	0	0
...........................................................................................................................................................................................................................................................................TGGTGGA---------GG---------AGGAGGTGGAGGT------G------G...............................................................................................................................................................................................................	24	3	0.33	1	0	0	0	0	1
.........................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGGTGGTGGTGGTGGTGGAGGT.............................................................................................	26	3	0.33	1	0	0	1	0	0
................GGTGGTGGAGG---------------------------------------------------------AGGAGGTGGAGGTGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................	27	3	0.33	1	0	0	1	0	0
.........................................................................................................................................................................................................................................................................GGTGGTGGA---------GG---------AGGAGGTGGAGGT------G------GT..............................................................................................................................................................................................................	27	3	0.33	1	0	0	1	0	0
.......................GAGG---------------------------------------------------------AGGAGGTGGAGGTGGTGGTG........................................................................................................................................................................................................................................................................................................................................................................................................................................	24	3	0.33	1	0	1	0	0	0
................................................................................................................................................................................................................................................................................GA---------GG---------AGGAGGTGGAGGT------G------GTGGT------G--------------------------------------------------------------------................................................................................................................................	24	3	0.33	1	0	1	0	0	0
..................TGGTGGAGG---------------------------------------------------------AGGAGGTGGAGGTGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................	24	3	0.33	1	0	0	0	0	1
...........................................................................................................................................................................................................................................................................TGGTGGA---------GG---------AGGAGGTGGAGGT------G------GT..............................................................................................................................................................................................................	25	3	0.33	1	0	1	0	0	0
................................................................................................................................................................................................................................................................................................................GGT------G------GTGGT------G--------------------------------------------------------------------GAGGAGGAGGTGGA..................................................................................................................	24	3	0.33	1	0	1	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGGTGGTGGTGGAGGTGGTGGT.......................................................................................	25	3	0.33	1	0	0	0	0	1
...........................................................................................................................................................................................................................................................................................................................................G--------------------------------------------------------------------GAGGAGGAGGTGGAGGTGGTGGT.........................................................................................................	24	3	0.33	1	0	1	0	0	0
...AGG---------TGGTGGTGGAGG---------------------------------------------------------AGGAGGTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	3	0.33	1	0	0	1	0	0
...................................................................................................................................................................................................................................................................................................................................GT------G--------------------------------------------------------------------GAGGAGGAGGTGGAGGTGGTGGTG........................................................................................................	27	3	0.33	1	0	0	1	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGAGGTGGTGGTGGTGGTGGA................................................................................................	24	3	0.33	1	0	0	1	0	0
..................TGGTGGAGG---------------------------------------------------------AGGAGGTGGAGGTGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................	25	3	0.33	1	0	1	0	0	0
..........................................................................................................................................................................................................................................................................................................GGTGGAGGT------G------GTGGT------G--------------------------------------------------------------------GAGGAGGA........................................................................................................................	24	3	0.33	1	0	1	0	0	0
.................................................................................................................................................................................................................................................................................................................GT------G------GTGGT------G--------------------------------------------------------------------GAGGAGGAGGTGGA..................................................................................................................	23	3	0.33	1	0	1	0	0	0
............................................................................................................................................................................................................................................................................................G---------AGGAGGTGGAGGT------G------GTGGT------G--------------------------------------------------------------------G...............................................................................................................................	22	3	0.33	1	0	1	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTGGTGGTGGTGGAGGTGGTG.........................................................................................	24	6	0.33	2	0	0	0	0	2
....................GTGGAGG---------------------------------------------------------AGGAGGTGGAGGTGGTGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................	25	3	0.33	1	0	0	1	0	0
.........................................................................................GTGGAGGTGGTGGTGGTGGTGGAGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................	26	3	0.33	1	0	0	1	0	0
................................................................................................TGGTGGTGGTGGTGGAGGTGGTG---------------------------------------------------------------------------------------------------------GT..............................................................................................................................................................................................................................................................................................................	25	3	0.33	1	0	0	0	0	1
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGTGGTGGAG------------------------------GA---GGAGGA...............	19	3	0.33	1	0	1	0	0	0
.............................................................................................................................................................................................................................................................................GTGGA---------GG---------AGGAGGTGGAGGT------G------GTGG............................................................................................................................................................................................................	25	3	0.33	1	0	0	1	0	0
...............................................................................................GTGGTGGTGGTGGTGGAGGTGGTG---------------------------------------------------------------------------------------------------------................................................................................................................................................................................................................................................................................................................	24	6	0.33	2	0	0	0	0	2
................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGGAGGTGGAGGTGGTGGTGG.......................................................................................................	25	3	0.33	1	0	1	0	0	0
...............................................................................................................................................................................................................................................................................GGA---------GG---------AGGAGGTGGAGGT------G------GTGGT------.....................................................................................................................................................................................................	24	3	0.33	1	0	1	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAGGAGGTGGAGGTGGTGGTG........................................................................................................	24	3	0.33	1	0	1	0	0	0
...................................................................................................................................................................................................................................................................................................................................GT------G--------------------------------------------------------------------GAGGAGGAGGTGGAGGTGGTGG..........................................................................................................	25	3	0.33	1	0	0	1	0	0
................GGTGGTGGAGG---------------------------------------------------------AGGAGGTGGAGGTGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................	26	3	0.33	1	0	0	1	0	0
.........................................................................................................................................................................................................................................................................................................................G------GTGGT------G--------------------------------------------------------------------GAGGAGGAGGTGGAGGTGGT............................................................................................................	27	3	0.33	1	0	0	1	0	0
..........................G---------------------------------------------------------AGGAGGTGGAGGTGGTGGTGGTGGTA..................................................................................................................................................................................................................................................................................................................................................................................................................................	27	3	0.33	1	0	0	1	0	0
.........................................................................................................................................................................................................................................................................................................................G------GTGGT------G--------------------------------------------------------------------GAGGAGGAGGTGGAGGTGA.............................................................................................................	26	3	0.33	1	0	0	1	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGGAGGCGGTGGTGGAG------------------------------GA---GG...................	23	3	0.33	1	0	0	0	0	1
..................TGGTGGAGG---------------------------------------------------------AGGAGGTGGAGGTGGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................	26	3	0.33	1	0	0	0	1	0
....................GTGGAGG---------------------------------------------------------AGGAGGTGGAGGTGGTGGTG........................................................................................................................................................................................................................................................................................................................................................................................................................................	27	3	0.33	1	0	0	1	0	0
.................................................................................................................................................................................................................................................................................................................................TGGT------G--------------------------------------------------------------------GAGGAGGAGGTGGAGGTGGTG...........................................................................................................	26	3	0.33	1	0	0	0	1	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................GTGGAGGTGGTGGTGGTGGTGGAGGTG............................................................................................	27	3	0.33	1	0	0	1	0	0
......................GGAGG---------------------------------------------------------AGGAGGTGGAGGTGGTGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................	24	3	0.33	1	0	1	0	0	0
........................................................................................GGTGGAGGTGGTGGTGGTGGTGGA................................................................................................................................................................................................................................................................................................................................................................................................................................	24	3	0.33	1	0	0	1	0	0
.........................................................................................................................................................................................................................................................................GGTGGTGGA---------GG---------AGGAGGTGGAGGT------G------A...............................................................................................................................................................................................................	26	3	0.33	1	0	0	1	0	0
.......................GAGG---------------------------------------------------------AGGAGGTGGAGGTGGTGGTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................	25	3	0.33	1	0	1	0	0	0
.................GTGGTGGAGG---------------------------------------------------------AGGAGGTGGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	4	0.25	1	0	0	1	0	0
..........................................................................................................................................................................................................................................................................GTGGTGGA---------GG---------AGGAGGTGGA................................................................................................................................................................................................................................	20	4	0.25	1	0	0	1	0	0
.........................................................................................................................................................................................................................................................................GGTGGTGGA---------GG---------AGGAGGT...................................................................................................................................................................................................................................	18	8	0.25	2	0	0	2	0	0
................GGTGGTGGAGG---------------------------------------------------------AGGAGGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	8	0.25	2	0	0	2	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTGGTGGTGGTGGAGGTGGTGG........................................................................................	26	4	0.25	1	0	0	0	1	0
...................................................................................................................................................................................................................................................................................................................................GT------G--------------------------------------------------------------------GAGGAGGAGGTGGAGGTGG.............................................................................................................	22	4	0.25	1	0	1	0	0	0
................................................................................................................................................................................................................................................................................................................................GTGGT------G--------------------------------------------------------------------GAGGAGGAGGTGGA..................................................................................................................	20	4	0.25	1	0	0	1	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGGTGGTGGAGGTGGTGGTG......................................................................................	23	4	0.25	1	0	0	0	0	1
.............................................................................................................................................................................................................................................................................GTGGA---------GG---------AGGAGGTGGAGGT------G------G...............................................................................................................................................................................................................	22	4	0.25	1	0	1	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTGGTGGTGGAGGTGGTGGTG......................................................................................	25	4	0.25	1	0	0	0	0	1
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGGAG------------------------------GA---GGAGGAGGAGGCGG.......	24	4	0.25	1	0	1	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTGGAG------------------------------GA---GGAGGAGGAGGCG........	24	4	0.25	1	0	1	0	0	0
.................................................................................................GGTGGTGGTGGTGGAGGTGGTG---------------------------------------------------------------------------------------------------------GTG.............................................................................................................................................................................................................................................................................................................	25	4	0.25	1	0	0	0	0	1
..................................................................................................................................................................................................................................................................................................................................GGT------G--------------------------------------------------------------------GAGGAGGAGGTGGAGGTGGTA...........................................................................................................	25	4	0.25	1	0	0	1	0	0
..............................................................................................GGTGGTGGTGGTGGTGGAGGTGGTG---------------------------------------------------------------------------------------------------------G...............................................................................................................................................................................................................................................................................................................	26	4	0.25	1	0	0	0	1	0
....................GTGGAGG---------------------------------------------------------AGGAGGTGGAGGTGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................	22	4	0.25	1	0	1	0	0	0
...................................................................................................TGGTGGTGGTGGAGGTGGTG---------------------------------------------------------------------------------------------------------GTG.............................................................................................................................................................................................................................................................................................................	23	4	0.25	1	0	0	0	0	1
...................GGTGGAGG---------------------------------------------------------AGGAGGTGGAGGTGGTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................	25	4	0.25	1	0	0	1	0	0
.........................................................................................................................................................................................................................................................................................................................G------GTGGT------G--------------------------------------------------------------------GAGGAGGAGGT.....................................................................................................................	18	8	0.25	2	0	0	2	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTGGAG------------------------------GA---GGAGGAGGAGGCGG.......	25	4	0.25	1	0	0	1	0	0
............................................................................................................................................................................................................................................................................GGTGGA---------GG---------AGGAGGTGGAGGT------G------GTA.............................................................................................................................................................................................................	25	4	0.25	1	0	0	1	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTGGAG------------------------------GA---GGAGGA...............	18	20	0.20	4	0	2	0	0	2
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTGGAG------------------------------GA---GGAGGAGGAGGCA........	25	5	0.20	1	0	0	0	1	0
.......................................................................................................GGTGGTGGAGGTGGTG---------------------------------------------------------------------------------------------------------GT..............................................................................................................................................................................................................................................................................................................	18	15	0.20	3	0	1	1	0	1
.......................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTGGAGGTGGTGGT.......................................................................................	18	15	0.20	3	0	1	1	0	1
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGAGGAGGCGGTGGT...	18	11	0.18	2	0	2	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGGTGGAGGTGGTGGTGG.....................................................................................	21	6	0.17	1	0	0	0	0	1
....................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGTGGTGGAGGTGGTGGT.......................................................................................	21	6	0.17	1	0	0	0	0	1
......................................................................................................TGGTGGTGGAGGTGGTG---------------------------------------------------------------------------------------------------------GTGG............................................................................................................................................................................................................................................................................................................	21	6	0.17	1	0	0	0	0	1
................................................................................................TGGTGGTGGTGGTGGAGGTGGTG---------------------------------------------------------------------------------------------------------................................................................................................................................................................................................................................................................................................................	23	6	0.17	1	0	1	0	0	0
...........................................................................................................................................................................................................................................................................................................GTGGAGGT------G------GTGGT------G--------------------------------------------------------------------GAG.............................................................................................................................	18	6	0.17	1	0	1	0	0	0

dp5

CTATGG---------AAGACCAGGATT---------------------------------------TGGAGG------------AGGCCCTGG---CTTTGGAGGCGGTTTCGGAGGTGGTCC------------G------------------------------------------------------------------------------------GGCTATGGCGGCTTTG---------------------GA------------------------GG---------TGGGCCTGGATAT------G------GCGGA------TTCGGCG----GGAGCC----------------------------------CG---------------------TATGGAGGCTTT------------------------GGAGGCGGTGGT---GG------------------------TCGTCGTCGTCATGGCGGCGGC---GGCGGCGGAGGTGGAGGTGGT	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
.............................................................................................................................................................................................................................................................................................................................................................................................................................CTTT------------------------GGAGGCGGTGGT---GG------------------------TC............................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................TTT------------------------GGAGGCGGTGGT---GG------------------------TC............................................	19	1	1.00	1	0	0	0	0	0	0	1	0	0	0
.................................................................................................TTTGGAGGCGGTTTCGGAGGTGGTC......................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	1	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGGC---GGCGGCGGAGGTG........	19	6	0.17	1	0	1	0	0	0	0	0	0	0	0

droPer2

TGGAGG---------AGGCGGTGGTGG---------------------------------------------------------TGGTGGCGGTGGTGGTGGCGGTGGCGGCGGCGGTATACC---------------------------------------------------------------------------------------------------------------------------------------AGCCGGATT-GA---AGG-------------------GATTCCAAAG-------------------------------------GGTGTGGCTGCCAAAGTGGCTGCAGCTGCTGCAGGAG---GAGGTCTCAAGG---------------------GACCACTAT---CATCAGTAGGTCGTGGAGGAGTGGGA---GGCGGAGGAGCAGGAG------------------------------GC---GGAGGAGGAGGACGGGGCGGA	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
......................GGTGG---------------------------------------------------------TGGTGGCGGTGGTGGTGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................	24	6	1.00	6	0	0	0	0	0	6
....................GTGGTGG---------------------------------------------------------TGGTGGCGGTGGTGGTGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................	25	3	0.33	1	0	0	0	0	0	1
.......................GTGG---------------------------------------------------------TGGTGGCGGTGGTGGTGGCGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................	26	5	0.20	1	0	0	0	0	0	1
.......................GTGG---------------------------------------------------------TGGTGGCGGTGGTGGTGGCG........................................................................................................................................................................................................................................................................................................................................................................................................................................	24	6	0.17	1	0	0	0	0	0	1
.........................GG---------------------------------------------------------TGGTGGCGGTGGTGGTGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................	21	7	0.14	1	0	0	0	0	0	1
...........................................................................................GGTGGTGGTGGCGGTGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................	18	20	0.05	1	0	0	0	0	0	1

droAna3

CTTCGG---------AGGACCTGGAGG---------------------------------------------------------TGGTTTTGGAGGACCTGGAGGTGGTTTCGGAGGTGGTTT------------------------------------------------------------------------------------------------------CGGAGGACCTG---------------------GA------------------------GG---------TGGCTTCGGAGGACCAGGAG------GTGGC------TTTGGCG-----------------------------------------------------------GAGGCGGCTTTGGACGCCCTGGAGGTG---GATTCGGAGGCCCTGGAGGTGGCTTC---GGAGGAGGTTTTGGTG---------------------------GCCCT---GGAGGAGGTTTCGGAGGAGGC	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
.........................................................................................TTGGAGGACCTGGAGGTGGT...................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	1	0
...........................................................................................................................................................................................................................................G---------------------GA------------------------GG---------TGGCTTCGGAGGA.............................................................................................................................................................................................................................	18	3	0.33	1	1	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGGTGGCTTC---GGAGGA..................................................................	18	3	0.33	1	1	0	0	0	0	0

droBip1

ACACGG---------AGGACCTGGTGG---------------------------------------------------------AGGTGG---ACACTTTGGTGGCGGCT---------------------------------------------TAAGCGGAGGTG---G---TAAACATAAAGGCCACGGAGG------------------------------CGGCGGCTTTGGAGGCGGTC---------CTGGCGGAGGCTTTGGA------------GG---------AGGTCATGGAGGA---GGTG------GCGGC------TTTGGAG----GAGGCG----------------------------------GCTATGGAGGCAGTCCTGGAGG------------------------------------CGGAGGCGGCTAT---GGAGGCGGTCCTGGAG------------------------------GC---GGTGGCGGCTATGGAGGTGGT	Size	Hit Count	Total Norm	Total
No Reads

droKik1

TCCGGCCAAAAGAGGTCGCTTCGATAA---------------------------------------------------------CGGCGGCGGA------------GGCGG------TG---G------------TGGACGCTT---------------------------------------------------------------------------------CGG---GAACA---------------------GAGGTGGCTATGG---AAATCAGGGAAACAGCAGCTATGGTCGTGGCGGG---CGTC------GCAAC------TATGGCG-----------------------------------------GTG------------------A---------------------------------------------AGGTTTC---GGTAATTATGGAGGAG------------------------------GT---TTTGGAAATAATGGAGGTGGT	Size	Hit Count	Total Norm	Total
No Reads

droFic1

TGGCTT---------TGGAACTGGTCG------------------------------------------AGGAAGATATGGAAATAGTAGAGGA------------GGATA---------------------CGGAAACAACTTT---------------------------------------------------------------------------GGATATGGAAATA---------------------ATGGA------------------------GG---------AGGGTACGGAAAT---------------------------AAT-G---GAGGAG----------------------------------GG---------------------TATGGAAATAATGGAGGAG---GGTATGGAAATAATGGAGGAGGATAT---GATAATGCTGGAGGAG------------------------------GC---TACGGAGGTAATGGAGGGGGA	Size	Hit Count	Total Norm	Total
No Reads

droEle1

CTTCGG---------AGGTCCTGGAGG---------------------------------------------------------CGGCTTCGGAGGTCCTGGAGGCGGTGGCT---------T------------------------------------------------------------------------------------------------------CGGCGGCC---------------------CTGGAGGCGGTTTCGG---AGGTCCGGGAGG---------CGGTTTCGGCGGTCCAGGAG------GCGGA------TTTGGAG-----------------------------------------GCG------------------GTGGCTTCGGAGGTCCT------------------------GGAGGCGGCTTC---GGAGGTCCTGGAGGAG------------------------------GC---TTCGGAGGTCCTGGA---GGC	Size	Hit Count	Total Norm	Total
No Reads

droRho1

TTCAAT---------TGGCGGTGGTTC---------------------------------------------------------CATTGGAG------------GTGGAT---------------------------------------------CC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGGCGGTGGCATC---AATTCCGGTCTGAGTG------------------------------GT---TTTGGAGGTCTGGGAGGTGG-	Size	Hit Count	Total Norm	Total
No Reads

droBia1

CGGAGG---------CGGAAGTGGTGG---------------------------------------------------------TGGTGGCCGCGGCAGAGGTGGTAGTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G---------------------------------------------TGGCCGA---GGCGGAGGTGGTGGCG------------------------------GT---GCTGGAGGTGCTGGAGGCGG-	Size	Hit Count	Total Norm	Total
No Reads

droTak1

TCCTGG---------AATCGGA---GGTGGAATT------GG------------------------T---GG------------CGGAGCCGGTGG---------------------------------------CGGACACTTTGGAGGTGGACTTAGCGGAGGTCACGGCCACAAGCA---------------------------------------------CGGAGGCCATG---------------------GA------------------------GG---------CGGTGGCGGATAC---AAAG------GCGGA------TCTGGT-----------------------------------------------------------------GGTGGCGGAGGATTTGGCGGCG---GTGGTGGAGGCGGCGGCGGTGGCTAC---GGAGGTGGTCCTGGAG------------------------------GC---GGTGGTGGCTACGGAGGCGGA	Size	Hit Count	Total Norm	Total
No Reads

droEug1

CTCACT---------TGGAGGTGGCGG------------------------------------------------------------------ACAC------------------------------------------------------------------------AAGCATAAGCACGGTGGCCATGGAGGTGCAGGCGGATATGGAGGCGGCGGCGGAGGTGGATTT---------------------------------------------------------------------GGAGGC---------------------------GGT-GGCGGCGGTG----------------------------------GCTACGGAGGTAAACCTGGCGGTAGTGGTGGCTACGGAGGTG---------------------------------------GTCCAGGCGGCGGCGGTGGCTACGGAGGCAGTGGTGGCGGTGGCTACGGAGGCAGTGGTGGCGG-	Size	Hit Count	Total Norm	Total
No Reads

dm3

ATATGG---------AAATAATGGAGG---------------------------------------------------------AGGATATGGAAATATTGGAGGAGGATATGGAAATAATGCAGGAGGTTATGGA------------------------------------------------------------------------------------------------AATAATGGTGGATATGGAAATAATGGC------------------------------------------------------G------GAGGT------TATAGA-----------------------------AATAATG------GTG------------------GAGGATATGGAAACAATGGCGGAG---GATATGGGAACAAGAGAGGTGGATTT---GGAGACTCATTTGAAA------------------------------GC---AATAGAGGATCAGGCGGCGGC	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
................................................................................................TATTGGAGGAGGATATGGAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	34.00	34	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	1	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	3	2	0	0	1	0	0	0	1	6	0	0	0	0	1	0	1	0	2	1	0
..................TAATGGAGG---------------------------------------------------------AGGATATGGAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	2	28.00	56	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	0	0	0	0	0	0	0	0	0	1	0	1	0	1	0	0	4	0	0	0	0	0	1	0	0	2	0	1	3	6	1	0	0	0	0	2	15	1	0	0	0	1	1	1	2	0	0	0
...................AATGGAGG---------------------------------------------------------AGGATATGGAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	2	18.00	36	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	1	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	2	1	3	0	2	0	1	0	1	0	0	0	0	0	1	7	0	0	0	0	0	1	0	0	0	0	0
................................................................................................TATTGGAGGAGGATATGGAA............................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	15.00	15	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	3	4	0	0	0	0	0	0	1	0	0	1	0
................................................................................................TATTGGAGGAGGATATGGAAAT..........................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	12.00	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	1	0	0	1	1	0	0
..................TAATGGAGG---------------------------------------------------------AGGATATGGAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	2	11.50	23	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	1	0	2	2	1	1	0	0	0	0	4	0	0	0	1	0	1	1	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATTTGAAA------------------------------GC---AATAGAGGATCAGGC......	27	1	11.00	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	2	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................TAATG------GTG------------------GAGGATATGGAAA...................................................................................................................	21	1	8.00	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	4	0	0	0	0
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.................................................................................................ATTGGAGGAGGATATGGAA............................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	8.00	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	3	1	0	0	0	0	1	0	0	0	0	0
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...............................................................................................ATATTGGAGGAGGATATGGAAAT..........................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	7.00	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
.....................................................................................................................TAATGCAGGAGGTTATGGA------------------------------------------------------------------------------------------------AATAATG.................................................................................................................................................................................................................................................................................................	26	1	7.00	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
........................................................................................................................TGCAGGAGGTTATGGA------------------------------------------------------------------------------------------------AATAATGGTG..............................................................................................................................................................................................................................................................................................	26	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
...............................................................................................ATATTGGAGGAGGATATGGAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAA------------------------------GC---AATAGAGGATCAGGCGGC...	25	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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.............................................................................................................TATGGAAATAATGCAGGAGGTTATGGA------------------------------------------------------------------------------------------------........................................................................................................................................................................................................................................................................................................	27	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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.................................................................................................ATTGGAGGAGGATATGGAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	1	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0
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.........................................................................................ATGGAAATATTGGAGGAGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCGGAG---GATATGGGAACAAGAG.....................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATTTGAAA------------------------------GC---AATAGAGGATCAG........	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................TGGC------------------------------------------------------G------GAGGT------TATAGA-----------------------------AATAATG------GTG------------------G...............................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA------------------------------GC---AATAGAGGATCAGG.......	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................ATGCAGGAGGTTATGGA------------------------------------------------------------------------------------------------AATAATGGT...............................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................ATATTGGAGGAGGATATGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................AACAATGGCGGAG---GATATGG..............................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................AATGGTGGATATGGAAATAATGGC------------------------------------------------------.......................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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..............................................................................................AATATTGGAGGAGGATATGGAA............................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................ATAATGGC------------------------------------------------------G------GAGGT------TATAGA-----------------------------AAT...............................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................CAGGAGGTTATGGA------------------------------------------------------------------------------------------------AATAATGGTGG.............................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................TGGTGGATATGGAAATAATGGC------------------------------------------------------.......................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
..........................................................................................................................................................................................................................................TAATGGTGGATATGGAAATA..................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................AGGATATGGAAATAATGCAGGA.................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................TAATGGC------------------------------------------------------G------GAGGT------TATAGA-----------------------------AATAATG------G....................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................ATG------GTG------------------GAGGATATGGAA....................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................TATTGGAGGAGGATATGGAAATAATG......................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0

droSim2

TACAGG---------ACGCTTCAGTAACAGCAGC---TTTGGTCGCCGTGGAAACGGCAGAACCTTTGGAGGAGGGTATGGAAATAATGGAGGA------------GGATATGGAAGTAA---------------------------------------------------------------------------------------------------------------------------------------TGGT------------------------GG---------AGGATATGGAAAT---------------------------AAT-G---GGGGAG----------------------------------GATATAGAAATAATGCAGTAGGTT------------------------ATGGAAATACTGGTGGAGGATAT---GGAAACCATGGCGGAG------------------------------GT---TATGGAAATAATGGTGGACGA	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
................................................................TTTGGAGGAGGGTATGGAAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGGATAT---GGAAACCATGGCG...........................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
..............................................CGTGGAAACGGCAGAACCTTTGGATA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
.....................................................ACGGCAGAACCTTTGGAGGAGGGTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCGGAG------------------------------GT---TATGGAA..............	17	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
...............................................GTGGAAACGGCAGAACCTTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGGATAT---GGAAACCATGGCGG..........................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGAGGATAT---GGAAACCATGGCGGAG------------------------------G.........................	27	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................TGGT------------------------GG---------AGGATATGGAAAT---------------------------AA................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0

droSec2

TGGAGG---------AGGGTATGGAAA---------------------------------------------------------TAATGGAGGA------------GGATATGGAAGTAA---------------------------------------------------------------------------------------------------------------------------------------TGGT------------------------GG---------AGGATATGGAAAT---------------------------AAT-G---GGGGAG----------------------------------GATATAGAAATAATGCAGTAGGTTATGGAAATTCT------------------------GGTGGAGGATAT---GGAAACCATGGCGGAG------------------------------GT---TATGGAAATAATGGTGGAGGA	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
....................................................................................................................GTAA---------------------------------------------------------------------------------------------------------------------------------------TGGT------------------------GG---------AGGATATGGAAA..............................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	1
...............................................................................................................................................................................................................................................................................................................................................................................................................................CT------------------------GGTGGAGGATAT---GGAAACCA................................................................	22	1	1.00	1	0	0	0	1
....................................................................................................................GTAA---------------------------------------------------------------------------------------------------------------------------------------TGGT------------------------GG---------AGGATATGGAA...............................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	1
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT---GGAAACCATGGCGGAG------------------------------GT---TATGG................	25	1	1.00	1	0	1	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................ATGGAAATTCT------------------------GGTGGAGGATAT---GGA.....................................................................	26	1	1.00	1	0	0	1	0
.....................................................................................................................TAA---------------------------------------------------------------------------------------------------------------------------------------TGGT------------------------GG---------AGGATATGGAAA..............................................................................................................................................................................................................................	21	2	1.00	2	1	0	0	1
.............................................................................................A------------GGATATGGAAGTAA---------------------------------------------------------------------------------------------------------------------------------------TGGT------------------------GG---------AGGA......................................................................................................................................................................................................................................	25	1	1.00	1	0	0	1	0
.......................................................................................................................A---------------------------------------------------------------------------------------------------------------------------------------TGGT------------------------GG---------AGGATATGGAAA..............................................................................................................................................................................................................................	19	2	0.50	1	0	1	0	0

droYak3

CGTAAT---------AGGT------GGCGGTCCTGGA---TT------------------------C---GGAGGAGGTGACTATTCTGGAGGA------------GGAGG---------------------CGGT---------------------------------------------------------------------------------------ATCGGCGGCGGAG---------GTGGCCATTCTGGT------------------------------------------------------GGAG------GCGGTGGAATCG-----------------------------------------------------------------GCGGCGCCGGAAGCTCTGCATCATCTTCAGTTGGAGTTATTGGCGGAGGTCAC---GGCGGCGGAAAACAAG------------------------------GC---GGCGGAGGTCACGGCGGCGG-	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCATCATCTTCAGTTGGAGT...........................................................................................	23	1	2.00	2	2	0	0	0	0	0	0	0	0	0	0
................................CTGGA---TT------------------------C---GGAGGAGGTGACT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................CGGAAGCTCTGCATCATCTTCA...................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
.................................................................................CTATTCTGGAGGA------------GGAGG---------------------CGG.........................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGCGGAGGTCAC---GGC.....................................................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTTATTGGCGGAGGTC.............................................................................	19	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
............................GGTCCTGGA---TT------------------------C---GGAGGAGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................CTGCATCATCTTCAGTTGGAGT...........................................................................................	22	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................CG-----------------------------------------------------------------GCGGCGCCGGAAGCTCTGCATCA.........................................................................................................	25	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................GGCGCCGGAAGCTCTGCATCAT........................................................................................................	22	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0

droEre2

CAGAGG---------AGGATATGGAAA---------------------------------------------------------CGGTATGGGTGGAAATGGAAGGGGTCCTGGAGGAA---T---------GGGT------------------------------------------------------------------------------------GGTAATGGAATG---------------------------------------------------------------GGTCCTGGGGGAA----------------------------------TGGGTG----------------------------------GTAACGGCATGGGTCCCGGAGGAATGGGTGGTAATGGAATGG---------------------------------------GTCCTGGAGGAATGGGTGGCTATAACGGTCGAG------GC---GTACCAAACGGAATGGGTGGA	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
No Reads

dmo_2492

scaffold_6680:14744772-14744867 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Repeatable elements

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-11.1	-11.0	-10.9