| droMoj3 | 
	scaffold_6680:14088412-14088662 + | 
	dmo_2487 | 
	ATATGTAGATATAGTGAACTTTGGAACA----------------------------------------ACAATAA---------------------------------------TAACC------ACACACC------------------------------------------TAACCT----CCCTAACACAGTCACGTA--CATACTTCTCACTTCAAAATTTAGACAATTGT-TGTCACTAACACAC------ACACACA-----CAC--------------------------------------------------------------------------------------A-CACC-------CTCAATAGAT-ATTGATGCCATATGCCTTATGCACTATT-TTT-----------------------------------------AAT------------ACTTCTACTTAACC---GA------------------TTCGTTTAGAGCCCCGCAAGGCGAAGCCTATTCTGAAGACAGATGAGCCCATCTGTCCC | 
	| droVir3 | 
	scaffold_13049:13273530-13273774 - | 
	 | 
	ATATATAGATATAGTGAACTTTGGAACA----------------------------------------AGAAGAAC-AACAA-CAAGAAA------------------------AAAAAAAACAAC-AATCC------------------------------------------TAACCT----CCCT--CACAATCACGTG--TATACTTCTCACTTCAAAATTTAGACATTTAT-TGTCACTAACACGC------CACAACA-----AAATCAGAGTC-------------------------------C---------------------------------------TG--------------------------------------------------CGCCAAAA--------------------------TC-T---------AACAT-----------AGGAATTCTT-----------------------CACCCA--CTTCTCTAGAGCCCCGCAAGGCGCAGCCCATATTGAAGACAGATGAGCCCATCTGTCCC | 
	| droGri2 | 
	scaffold_15110:18712677-18712984 - | 
	 | 
	TTATGTAGATATAGTGAACTTTGGAACTTATCAACTAAACATGCGAAGCAACCACAACCACAACAACAAGAACAAG-AACAA-CAAAAACAACAGCAACAACAATCACCATCAATAAAA------AGCACCC------------------------------------------TAACCT----CCCT--CACACTCACTTG--TATACTTCTCACTTCAAAATTTAGACAATCGT-TGTCACTAACCCAA------ACCAAAC-----CAA----------------------------------------AAACCA--------------------------TAA--TTTA--------------------------------------------------AGCCAATA--------------------------TC-T---------AACAT-----------ATGAATTCCT-A----------------------ATCCACTTCTGCACAGGGCCGCGCAAGGCGAAGCCCATTCTGAAAACGGATGAGCCCATTTGTCCC | 
	| droWil2 | 
	scf2_1100000004762:4823192-4823465 - | 
	 | 
	ATTTATAGACATC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTGT-TGTCGCTAACACAT------AACCACTTCACCCACC----CTCCCGCATAACCCACTAAACTTGCCTCTCCCTCCAGCC--TGTTTAAGTATCAGCTAACAATTGTACG-TATTTATATGTT-TATTAAATAAGTTTAATTGTA-ATTGTTGCTATTAATCGTTTTTATTATTA-TCTATACTATATACTGGTAAAC------------------------------------ATTTCT-A-TAATT---A--------T----------CTTGTTTAGAACCACGCAAAGTCAAACCCATTCTGAAAACAGATGAACCCATCTGTTCT | 
	| dp5 | 
	XR_group8:7761609-7761811 - | 
	 | 
	AAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------CG---CACTAACCG----CACTCATGCATTCATATG--TATATTTCTCATTTCAAAATTTAGACATGTGT-TGTCACTAACCAA-----ACTTT--------------------------------------------------------------------------------------------AGGCACAAGACC-------CTCAAGA--TGATCCTTGATCTAACCCCCATCCACCATC-TTT-----------------------------------------AAT---T-------------------------------------CGCACG--TTTCTACAGAGCCCCGCAAGGCCAAGCCCATCCTGAAGACGGATGAGCCCATCTGTCCA | 
	| droPer2 | 
	scaffold_48:540335-540537 - | 
	 | 
	AAC-------------------------------------------------------------------------------------------------------------------------------------------------------------------CG---CACTAACCG----CACTCATGCATTCATATG--TATATTTCTCATTTCAAAATTTAGACATGTGT-TGTCACTAACCAA-----ACTTT--------------------------------------------------------------------------------------------AGGCACAAGACC-------CTCAAGA--TGATCCTTGATCTAACCCCCATCCACCATC-TCT-----------------------------------------CAT---T-------------------------------------CGCACG--TTTCAACAGAGCCCCGCAAGGCCAAGCCCATCCTGAAGACGGATGAGCCCATCTGTCCA | 
	| droAna3 | 
	scaffold_13337:17208607-17208869 + | 
	 | 
	A------GATTTCCGGAACTTTGGTAGA----------------------------------------ACCATAAA-A----TAATCCAA------------------------AAATAT----AT-TATCCTT-----------------ACTAATTTCCC-ACTTT----TGTAA--TCCATTCAT--CAAACTCATGTGTAAATACTTCCCATTTCAAAATTTAGACACTCGTTTGTCACTAACTGAAC-TTGCTTTTACC-----CACAAATGA--------------------------------------------------------------------------------------------------------------------------------------------------------------TTT-----------ACTTT-----------TGGAGTTCCCAACTAACT---T---GT--TATCCACCC---ACTTTATAGAGCCCCGCAAGGCCAAGCCCATCCTGAAGACCGATGAGCCCATCTGTCCC | 
	| droBip1 | 
	scf7180000396741:504097-504337 + | 
	 | 
	G-----------------------TAGA----------------------------------------ACCAAAAA-A----TAATTAA-------------------------AAAAC----AAA-AATCCTTAC-----------------TAATTTCCC-ACCTT----TGTAA--TCCATTCAT--CAGACTCATGTGTAAATACTTCCCATTTCAAAATTTAGACACTCGTTTGTCACTAACTAATA-ATGCTTTTACA-----AAT----GA--------------------------------------------------------------------------------------------------------------------------------------------------------------TTT-----------CCTTG-----------TGATGTTCCCAATTAACT---TATTAT--CC---ACCA---ACTTTTCAGAGCCCCGCAAGGCCAAGCCCATCCTGAAGACGGATGAGCCCATCTGTCCC | 
	| droKik1 | 
	scf7180000302694:258911-259153 - | 
	 | 
	CCAAAAAGAAA---------------------------------------------------------------AA-A----TAAAGAA-------------------------TAAAG------A-AATCCTAACCCCACCCAGCTCGAAACTAAC--CCC-GCCTA---TTGTCA--C----CCAT--CACACTCATGTA--AATACTTCTCATTTCAAAATTTAGACATTTGT-TGTCACTAACCCG-----GCTTTTAGG-----A----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCCT----------------------AAGAG-GCACCCCCACTAACC---GACTGT--TTCTCCCCAA--CTCCCGCAGAGCCCCGCAAGGCCAAGCCCATCCTGAAGACGGATGAGCCCATCTGCCCC | 
	| droFic1 | 
	scf7180000453831:244456-244699 - | 
	 | 
	ACGT-TAGAACTCCGGAACTTTGGTAGA----------------------------------------TCCTCC-A-G------------------------------------GAAAC------AGAGCCCTAACCCC-----ACTCGAAACTAAC--CCC-GCCTG---TTCTAA--C----CCAT--CACACTCATGTA--AATACTTCTCATTTCAAAATTTAGACATTTGT-TGTCACTAACCCG-----GCCTTCAAG-----T---------C-------------------------------CCGC------------------------------------------------------------------------------------------------------------------CAATGAGCT------------------------------------CCAACTAACCGAAAAGT-----A----------TCTCCACAGAGCCCCGCAAGGCCAAGCCCATCCTGAAGACGGATGAGCCCATCTGTCCC | 
	| droEle1 | 
	scf7180000491249:6996910-6997178 - | 
	 | 
	-----TAGACTTCCGGAACTTTGGTAGA----------------------------------------TCAAAAAA-AAAAA--AAGAAA--AAGGT-----------------GAAAC---TAAT-TATCCTAACCCA--CCAGATCGAAACTAAC--ACC-ACCTG---TGCTAA-CT----CCAT--CACACTCATGTA--AATACTTCTCATTTCGAAATTTAGACATTTGT-TGTCACTAACACACCTTGGCTTTGAAG-----T---------T-------------------------------TGAC---------------------------------------------------------------------------------CAAAGTACACCCTT-GCT-----------------------------------------AAT---T---------------------T---AAATG---AA----------TTTCCACAGAGCCCCGCAAGGCCAAGCCCATTCTGAAGACGGACGAGCCCATCTGCCCC | 
	| droRho1 | 
	scf7180000778273:73487-73736 + | 
	 | 
	-----TAGACTTCCGGAACTTTGGTAGA----------------------------------------TCCAAAAAGA------------------------------------GAAAC------AAAATCCTAACCCA--CCAGCTCGAAACTAAT--ACC-ACCTG---TGCTAA-CT----CCAT--CACACTCATGTA--AATACTTCTCATTTCGAAATTTAGACATTTGT-TGTCACTAACAC--CTTGGCTTTGAAG-----A---------T-------------------------------CGGC------------------------------------------------------------------------------------------------------------------CAATA-----------------------------------AGCTCTTAGCTAATC---AAGTGT--AA----------TTTCCACAGAGCCTCGCAAGGCCAAGCCCATCCTGAAGACGGATGAGCCCATCTGTCCC | 
	| droBia1 | 
	scf7180000302377:1916605-1916823 + | 
	 | 
	G-----------------------TAGA----------------------------------------TCCAAGAA-A------------------------------------GAAAC------A-AACCCTAACCCA-----GCTCGAGACTAAC--CCC-ACCTG---T-CTAA--C----CCAT--CACACTCATGTA--AATACTTCTCATTTCGAAATTTAGACATTTGT-TGTCACTAACCCG-----GCTTTGACC-----C-C----------------------------------------CGG------------------------------------------------------------------------------------------------------------------CAAAGA------------------------------------ATCCCATCTAATT---ACGTGT--TA-----------CCCCGCAGAGCCGCGCAAGGCGAAGCCCATCCTGAAGACGGATGAGCCCATCTGCCCC | 
	| droTak1 | 
	scf7180000415949:43792-44019 + | 
	 | 
	G-----------------------TAGA----------------------------------------TCCAAGAA-A------------------------------------GAAAC------A-AACCCTAACCCA-----GCTCGAAACTAAC--ACC-ACCCG---TTCTAA--C----CCAT--CACACTCATGTA--AATACTTCTCATTTCGAAATTTAGACATTTGT-TGTCACTAACCACCACCGGCCTTAACC-----A----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTCGC----------------------AAAAG-ATTTCCCCACTAATG---GAGCCT--CC----------TTTTCACAGAGCCCCGCAAGGCCAAGCCCATCCTGAAGACGGATGAGCCCATCTGTCCC | 
	| droEug1 | 
	scf7180000409472:238870-239100 - | 
	 | 
	G-----------------------TAGA----------------------------------------TCCAAGAA-A------------------------------------GAAAC------A-AACCCTAACCCA-----GCTCGAAACTAAC--ACC-ACCTG---TATTAA--C----CCAT--CACACTCATGTA--AATACTTCTCATTTCAAAATTTAGACATTTGT-TGTCACTAACCCG-----GCTCTGACC-----CTT----------------------------------------TGC------------------------------------------------------------------------------------------------------------------CAA-------------------------A---CTAAAAG-AGTCCTCAACTAACA---GAGTCTGTCA----------TTTCCACAGAGCCCCGCAAGGCCAAGCCCATCCTGAAGACGGATGAGCCCATCTGTCCC | 
	| dm3 | 
	chr3L:19685009-19685241 - | 
	 | 
	ATC-------------------------------------------------------------------CACGAA-C------------------------------------GAAAC------A-AACCCTAACCCA-----GCTCGAAACTAAC--AACCACCTAAACTACTAAACC----CCAT--CACACTCATGTA--AATACTTCTCATTTCAAAATTTAGACATTTGT-TGTCACTAACACGC------CTCCATC-----CACCAGTAG--------------------------------------------------------------------------------------------------------------------------------------------------------------CTC-CA---------------------AAACGTAGCTTCCCACTAACT---GAGTGT--AC----------ATTCCACAGAGCCGCGCAAGGCCAAGCCCATCCTGAAGACGGATGAGCCCATCTGTCCC | 
	| droSim2 | 
	3l:19335348-19335580 - | 
	dsi_5111 | 
	ATC-------------------------------------------------------------------CACGAA-C------------------------------------GAAAC------A-AACCCTAACCCA-----GCTCGAAACTAAC--ACCCACCGAAACTACTAAACC----CCAT--CACACTCATGTA--AATACTTCTCATTTCAAAATTTAGACATTTGT-TGTCACTAACACGC------CTCCACC-----CACTAATAG--------------------------------------------------------------------------------------------------------------------------------------------------------------CTC-CA---------------------AAAAGTAGCTTCCCACTAACT---GAGTGC--TC----------ATTCCACAGAGCCGCGCAAGGCCAAGCCCATCCTGAAGACGGATGAGCCCATCTGTCCC | 
	| droSec2 | 
	scaffold_29:387512-387744 - | 
	 | 
	ATC-------------------------------------------------------------------CACGAA-C------------------------------------GAAAC------A-AACCCTAACCCA-----GCTCGAAACTAAC--ACCCACCTAAACTACTAAACC----CCAT--CACACTCATGTA--AATACTTCTCATTTCAAAATTTAGACATTTGT-TGTCACTAACACGC------CTCCACC-----CACTAATAG--------------------------------------------------------------------------------------------------------------------------------------------------------------CTC-CA---------------------AAAAGTGGCTTCCCACTAACT---AAGTGT--TC----------ATTCCACAGAGCCGCGCAAGGCCAAGCCCATCCTGAAGACGGATGAGCCCATCTGTCCC | 
	| droYak3 | 
	3L:20844268-20844494 + | 
	 | 
	ATC-------------------------------------------------------------------CACGAA-C------------------------------------GAAAC------A-AACCCTAACCCA-----GCTCGAAACTAAC--ACC-CACCG---TACTAAACC----CCAT--CACACTCATGTA--AATACTTCTCATTTCGAAATTTAGACATTTGT-TGTCACTAACACGC------TTCCACC-----AACCCAAAG--------------------------------------------------------------------------------------------------------------------------------------------------------------CCC------------------------AAAAGTAGCTCCCCACTAACT---GAGTGC--TC----------CTTCCGCAGAGCCCCGCAAGGCCAAGCCCATCCTGAAGACGGACGAGCCCATCTGTCCC | 
	| droEre2 | 
	scaffold_4784:19482561-19482831 - | 
	 | 
	-----TAGACTTCCGGAACTTTGGTAGA----------------------------------------TCCACGAA-C------------------------------------GAAAC------A-AGCCCTAACCCA-----GCTCGAAACTAAC--CGC-CACCG---TACTAAACC----CCAT--CACACTCACGTA--AATACTTCTCATTTCAAAATTTAGACCTTTGT-TGTCACTAACACGC------CTCCACC-----AAC----------------------------------------CGC------------------------------------------------------------------------------------------------------------------CCAAAAGTTC-AAAAAGTGCC-----AAAGTGCCAAAAGTAGCGCCCCAGTAACT---GAGTGT--CC----------ATTCCACAGAGCCCCGCAAGGCCAAGCCCATCCTGAAGACGGACGAGCCCATCTGCCCG |