ID:

dmo_247

 Coordinate:

scaffold_6541:260607-260675 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-23.1

Flybase annnotation

intergenic

Repeatable elements

NameClassFamilyStrand
Gypsy1-LTR_DmojLTRGypsy+
mature
  1. dmo_247  scaffold_6541:260608-260632 -
  2. dmo_246  scaffold_6541:274510-274534 -
star
  1. dmo_247  scaffold_6541:260649-260675 -
  2. dmo_246  scaffold_6541:274551-274577 -

Sense Strand Reads

GACGTTAGTGGGGATCATCCGGCGAACGGGCCGAAGCCACGTTCAAACTACCAGTTAGTATTACTGTGGTTGACTACTGTTTGTGTTAAGGGTTAATGAAACGGGCAAACTAGCTACGAATGAATGATGGTGTATTCATGTCCATATATGCTTACTTTATTCTAATAGA
***********************************((((((((((.......(((((((....((((.(((((((.((..........)))))))))...))))....))))))).....)))))).))))..************************************ 		Read size # Mismatch Hit Count Total Norm Total M060
embryo
 M046
female body
 V110
male body		 V041
embryo
 V049
head
..................................................CCAGTTAGTATTAATGTGGTTGACTAC............................................................................................ 27 1 3 31.00 93 87 6 0 0 0
.............................................................................................TAATGAAACGGGCAAACTAGCTACG................................................... 25 0 2 29.50 59 44 14 1 0 0
..................................................CCAGTTAGTATTACTGTGGTTGACTAC............................................................................................ 27 0 2 20.50 41 35 6 0 0 0
..................................................CCAGTTAGTATTACTGTGGTTGACT.............................................................................................. 25 0 2 17.50 35 12 22 0 1 0
.............................................................................................TAATGAAACGGGCAAACTAGCTACGAA................................................. 27 0 2 10.50 21 0 18 3 0 0
..................................................CCAGTTAGTATTAATGTGGTTGACT.............................................................................................. 25 1 3 9.67 29 7 22 0 0 0
..................................................CCAGTTAGTATTACTGTGGTTGAC............................................................................................... 24 0 2 8.50 17 10 7 0 0 0
..................................................CCAGTTAGTATTAATGTGGTTGAC............................................................................................... 24 1 3 5.00 15 14 1 0 0 0
.............................................................................................TAATGAAACGGGCAAACTAGCTAC.................................................... 24 0 2 4.00 8 3 4 1 0 0
..CGTTAGTGGGGATCATCCGGCGAAC.............................................................................................................................................. 25 0 2 3.50 7 3 4 0 0 0
............................................................................................................................TGATGGTGTATTCATGTCCATATATGC.................. 27 0 2 3.50 7 2 5 0 0 0
..................................................CCAGTTAGTATTACTGTGGTTGACC.............................................................................................. 25 1 2 3.00 6 6 0 0 0 0
.............................................................................................TAATGAAACGGGCAAACTAGCTACGA.................................................. 26 0 2 3.00 6 1 5 0 0 0
....................................................................................................................................TATTCAAGACCATATATGC.................. 19 2 3 3.00 9 0 9 0 0 0
..CGTTAGTGGGGATCATCCGGCGAA............................................................................................................................................... 24 0 2 2.50 5 0 5 0 0 0
..CGTTAGTGGGGATCATCCGGCG................................................................................................................................................. 22 0 2 2.50 5 0 5 0 0 0
..................................................CCAGTTAGTATTACTGTGGTTGACTA............................................................................................. 26 0 2 2.50 5 0 4 0 1 0
.............................................................................................TAATGAAACGGGCAAACTAGCTACGAAT................................................ 28 0 2 2.00 4 0 4 0 0 0
...................................................CAGTTAGTATTACTGTGGTTGACTAC............................................................................................ 26 0 2 1.50 3 1 2 0 0 0
..................................................CGAGTTAGTATTACTGTGGTTGACTAC............................................................................................ 27 1 2 1.50 3 3 0 0 0 0
.............................................................................................TAATGAAACGGGCAAACTAGCT...................................................... 22 0 2 1.50 3 1 2 0 0 0
..................................................CCAGTTAGTATTAATGTGGTTGACC.............................................................................................. 25 2 3 1.33 4 4 0 0 0 0
..................................................CGAGTTAGTATTAATGTGGTTGACTAC............................................................................................ 27 2 3 1.33 4 4 0 0 0 0
..CGTTAGTGGGGATCATCCGGCGAACGGG........................................................................................................................................... 28 0 2 1.00 2 0 2 0 0 0
..............................................................................................AATGAAACGGGCAAACTAGCTAC.................................................... 23 0 2 1.00 2 0 2 0 0 0
.............................................................................................TAATGAAACGGGCAAACTAGC....................................................... 21 0 2 1.00 2 2 0 0 0 0
................................................................................TTGTGTTAAGGGTTAATGAAACGGGC............................................................... 26 0 2 1.00 2 0 1 1 0 0
........................................................................................................................TGAATGATGGTGTATTCATGTCCAT........................ 25 0 4 1.00 4 0 2 0 2 0
..CGTTAGTGGGGATCATCCGG................................................................................................................................................... 20 0 2 1.00 2 0 1 0 1 0
GACGTTAGTGGGGATCATCCGGC.................................................................................................................................................. 23 0 2 1.00 2 1 1 0 0 0
..............................................................................................AATGAAACGGGCAAACTAGCTACG................................................... 24 0 2 1.00 2 2 0 0 0 0
...................................................CAGTTAGTATTACTGTGGTTGACTA............................................................................................. 25 0 2 1.00 2 0 2 0 0 0
............................................................................................................................TGATGGTGTATTCATGTCCATATATG................... 26 0 2 1.00 2 0 2 0 0 0
...GTTAGTGGGGATCATCCGGCGAACGGG........................................................................................................................................... 27 0 2 1.00 2 0 2 0 0 0
........................................................................................................................TGAATGATGGTGTATTCATGTCCATATA..................... 28 0 4 0.75 3 1 2 0 0 0
........................................................................................................................TGAATGATGGTGTATTCATGTCCATA....................... 26 0 4 0.75 3 0 3 0 0 0
..........................................TCAAACTACCAGTTAGTATTAATGTGG.................................................................................................... 27 1 4 0.75 3 0 3 0 0 0
..................................................CCAGTTAGTATTCATGTGGTTGACTAC............................................................................................ 27 2 3 0.67 2 2 0 0 0 0
..........................................TCAAACTACCAGTTAGTATTACTG....................................................................................................... 24 0 3 0.67 2 0 2 0 0 0
.....................................................GTTAGTATTACTGTGGTTGACTAC............................................................................................ 24 0 3 0.67 2 1 1 0 0 0
..................................................CCAGTTAGTATTAATGTGGTCGACTAC............................................................................................ 27 2 3 0.67 2 2 0 0 0 0
...................................................CAGTTAGTATTAATGTGGTTGACTAC............................................................................................ 26 1 3 0.67 2 1 1 0 0 0
.............................................................................................TAATGAAACGTGCAAACTAGCTAC.................................................... 24 1 2 0.50 1 0 0 1 0 0
................................................................................................TGAAACGGGCAAACTAGCTACGAATG............................................... 26 0 2 0.50 1 0 1 0 0 0
.............................................................................................TAATGAAACGGGCAAACTAGCTACGCC................................................. 27 2 2 0.50 1 0 1 0 0 0
..............................................................................................AATGAAACGGGCAAACTAGCTA..................................................... 22 0 2 0.50 1 0 1 0 0 0
.............................................................................................TGATGAAACGGGCAAACTAGCTACG................................................... 25 1 2 0.50 1 1 0 0 0 0
..CGTTAGTGGGGATCATCCGGC.................................................................................................................................................. 21 0 2 0.50 1 0 1 0 0 0
................................................................................TTGTGTTAAGGGTTAATGAAACG.................................................................. 23 0 2 0.50 1 0 1 0 0 0
..................................................CCAGTTAGTATTACTGTGGTTG................................................................................................. 22 0 2 0.50 1 0 1 0 0 0
.......................................................................................AAGGGTTAATGAAACGGGCAA............................................................. 21 0 2 0.50 1 0 1 0 0 0
.............................................................................................TAATGAAACGGGCAAACTAGCTA..................................................... 23 0 2 0.50 1 1 0 0 0 0
..........................................................................................GGTTAATGAAACGGGCAAACTAGCT...................................................... 25 0 2 0.50 1 1 0 0 0 0
..................................................CCAGTTAGTATTACTGTGGATGACGAC............................................................................................ 27 2 2 0.50 1 1 0 0 0 0
..................................................CCAGTTAGTATTACTGTGGTTGACTAAA........................................................................................... 28 2 2 0.50 1 1 0 0 0 0
..............................................................................GTTTGTGTTAAGGGTTAATGAA..................................................................... 22 0 2 0.50 1 0 1 0 0 0
.............................................................................................TAATGAACCGGGCAAACTAGCTACG................................................... 25 1 2 0.50 1 1 0 0 0 0
.............................................................................................TAATGAAACGGCCAAACTAGCTACG................................................... 25 1 2 0.50 1 0 1 0 0 0
.............................................................................................TAATGAAACGGGCAAACTAGCTACGT.................................................. 26 1 2 0.50 1 1 0 0 0 0
...............................................................................................ATGAAACGGGCAAACTAGCTACG................................................... 23 0 2 0.50 1 0 1 0 0 0
..................................................CCAGTTAGTATTACTGTGGGTGACTAC............................................................................................ 27 1 2 0.50 1 1 0 0 0 0
..................................................CCAGTTAGTATTACTGTGGT................................................................................................... 20 0 2 0.50 1 1 0 0 0 0
.............................................................................................TAATGAAACGGGCAAACTAGCTACC................................................... 25 1 2 0.50 1 1 0 0 0 0
..................................................CCAGTTAGTATGACTGTGGTTGACT.............................................................................................. 25 1 2 0.50 1 0 1 0 0 0
.ACGTTAGTGGGGATCATCCGGCG................................................................................................................................................. 23 0 2 0.50 1 0 1 0 0 0
..CGTTAGTGGGGATCATCCGGCC................................................................................................................................................. 22 1 2 0.50 1 0 1 0 0 0
..................................................CCAGTTAGTATTACTGTGGTTGACTG............................................................................................. 26 1 2 0.50 1 0 1 0 0 0
...................................................................................................................................GTATTCATGTCCATATATG................... 19 0 2 0.50 1 0 1 0 0 0
.......................................................TAGTATTACTGTGGTTGACTACTGT......................................................................................... 25 0 2 0.50 1 0 1 0 0 0
................................................................................................TGAAACGGGCAAACTAGCTACGAAT................................................ 25 0 2 0.50 1 0 1 0 0 0
..................................................CCAGTTGGTATTACTGTGGTTGACTAC............................................................................................ 27 1 2 0.50 1 1 0 0 0 0
..............................................................................................AATGAAACGGGCAAACTAGCTACGAA................................................. 26 0 2 0.50 1 0 1 0 0 0
..................................................................TGGTTGACTACTGTTTGTGTTAAGGGT............................................................................ 27 0 2 0.50 1 0 1 0 0 0
.............................................................................TGTTTGTGTTAAGGGTTAATGAAA.................................................................... 24 0 2 0.50 1 0 0 1 0 0
..........................................TCAAACTACCAGTTAGTATTACTGTGG.................................................................................................... 27 0 2 0.50 1 0 1 0 0 0
..................................................CGAGTTAGTATTACTGTGGTTGAC............................................................................................... 24 1 2 0.50 1 1 0 0 0 0
..................................................CCAGTTAGCATTACTGTGGTTGACTAC............................................................................................ 27 1 2 0.50 1 0 1 0 0 0
..CGTTAGTGGGGATCATCCGGCGAACG............................................................................................................................................. 26 0 2 0.50 1 0 1 0 0 0
.....................................................................TTGACTACTGTTTGTGTTAAGGGTA........................................................................... 25 1 2 0.50 1 0 1 0 0 0
...................................................CAGTTAGTATTGCTGTGGTTGACT.............................................................................................. 24 1 2 0.50 1 0 1 0 0 0
.............................................................................................TAAAGAAACGGGCAAACTAGCTACG................................................... 25 1 2 0.50 1 1 0 0 0 0
..................................................CCAGTTAGTATTACTGTGGTTGACTGC............................................................................................ 27 1 2 0.50 1 1 0 0 0 0
........................................................................................................................................CATGTCCATATATGCTTACTTTATTC....... 26 0 2 0.50 1 0 1 0 0 0
..................................................CCAGTTAGTATTACTGTGGTTGA................................................................................................ 23 0 2 0.50 1 0 0 0 1 0
..CGTTAGTGGGGATCATCCGGCGAACGGGC.......................................................................................................................................... 29 0 2 0.50 1 1 0 0 0 0
..CGTTAGTGGGGATCATCCGGCGA................................................................................................................................................ 23 0 2 0.50 1 0 1 0 0 0
..............................................................................................AACGAAACGGGCAAACTAGCTACG................................................... 24 1 2 0.50 1 1 0 0 0 0
.ACGTTAGTGGGGATCATCCGGCGA................................................................................................................................................ 24 0 2 0.50 1 0 1 0 0 0
GACGTTAGTGGGGATCATCCGGCGAAC.............................................................................................................................................. 27 0 2 0.50 1 0 1 0 0 0
................................................TACCAGTTAGTATTACTGTGGTTGACTAC............................................................................................ 29 0 2 0.50 1 1 0 0 0 0
GACGTTAGTGGGGATCATCCGG................................................................................................................................................... 22 0 2 0.50 1 1 0 0 0 0
..................................................CCAGTTAGTATTACTGTGGGTGAC............................................................................................... 24 1 2 0.50 1 1 0 0 0 0
..................................................CCAGTTAGTATTAATGTGGTTGACTAT............................................................................................ 27 2 3 0.33 1 1 0 0 0 0
...........................................CAAACTACCAGTTAGTATTAATGTGGT................................................................................................... 27 1 3 0.33 1 0 1 0 0 0
..................................................CCAGTTAGTATTAATGTGTTTGAC............................................................................................... 24 2 3 0.33 1 1 0 0 0 0
..................................................CCATTTAGTATTAATGTGGTTGACTAC............................................................................................ 27 2 3 0.33 1 1 0 0 0 0
........................................................AGTATTACTGTGGTTGAC............................................................................................... 18 0 3 0.33 1 1 0 0 0 0
..................................................CCCGTTAGTATTAATGTGGTTGACTAC............................................................................................ 27 2 3 0.33 1 1 0 0 0 0
...................................................CAGTTAGTATTAATGTGGTTGACT.............................................................................................. 24 1 3 0.33 1 0 1 0 0 0
.........................................TTCAAACTACCAGTTAGTATTACTG....................................................................................................... 25 0 3 0.33 1 0 1 0 0 0
..................................................CCAGATAGTATTAATGTGGTTGACTAC............................................................................................ 27 2 3 0.33 1 1 0 0 0 0
..................................................TGCGTTAGTATTACTGTGGTTGACT.............................................................................................. 25 3 3 0.33 1 1 0 0 0 0
..................................................CTAGTTAGTATTACTGTGGTTGACTAC............................................................................................ 27 1 3 0.33 1 1 0 0 0 0
..................................................CCAGTCAGTATTAATGTGGTTGACTAC............................................................................................ 27 2 3 0.33 1 1 0 0 0 0
........................................................................................................................TGAATGATGGTGTATTCATGTCCATAT...................... 27 0 4 0.25 1 0 1 0 0 0
.............................................................................................................................GATGGTGTATTCATGTCCATATAT.................... 24 0 4 0.25 1 0 1 0 0 0
........................................................................................................................TGAATGATGGTGTATTCATGTCCA......................... 24 0 4 0.25 1 0 1 0 0 0
.................................................................................................................CTACGAATGAATGATGGTGTATTCATC............................. 27 1 4 0.25 1 0 1 0 0 0
..................................................CCAGTTAGTATTAATGTGGCTGACTAC............................................................................................ 27 2 4 0.25 1 1 0 0 0 0
.................................................................................................................CTACGAATGAATGATGGTGTATTCAT.............................. 26 0 4 0.25 1 0 0 1 0 0
.......................................................TAGTATTAATGTGGTTGACTAC............................................................................................ 22 1 4 0.25 1 1 0 0 0 0
.................................................................................................................CTACGAATGAATGATGGTGTATTCA............................... 25 0 4 0.25 1 0 1 0 0 0
......................................................TTAGTATTAATGTGGTTGACTAC............................................................................................ 23 1 4 0.25 1 0 1 0 0 0
............................................................................................................................TGATGGTGTATTCATGTCCATATATC................... 26 1 4 0.25 1 0 1 0 0 0
.................................................................................................................CTCCGAATGAATGATGTTGTA................................... 21 2 4 0.25 1 0 0 0 1 0
.................TCCGGCGAACGGGCCGAAGCCACGTT.............................................................................................................................. 26 0 4 0.25 1 0 1 0 0 0
............................................................................................TTAATGAAACGGGCAAACTATTA...................................................... 23 3 5 0.20 1 0 1 0 0 0
..................................AGCCACGTTCAAACTACCAGTTAGTA............................................................................................................. 26 0 5 0.20 1 0 1 0 0 0
.............................................................................................TAATGAAACGGGCAAACT.......................................................... 18 0 5 0.20 1 0 1 0 0 0
..................................AGCCACGTTCAAACTACCAGTTAGT.............................................................................................................. 25 0 12 0.08 1 0 1 0 0 0
..................................................................TGGTAGACTAGTGTTTGTT.................................................................................... 19 3 20 0.05 1 0 0 0 0 1
.........................................................GTATTACTTGGTTTGACTA............................................................................................. 19 3 20 0.05 1 0 0 1 0 0

Anti-sense strand reads

CTGCAATCACCCCTAGTAGGCCGCTTGCCCGGCTTCGGTGCAAGTTTGATGGTCAATCATAATGACACCAACTGATGACAAACACAATTCCCAATTACTTTGCCCGTTTGATCGATGCTTACTTACTACCACATAAGTACAGGTATATACGAATGAAATAAGATTATCT
************************************((((((((((.......(((((((....((((.(((((((.((..........)))))))))...))))....))))))).....)))))).))))..*********************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body		 V041
embryo
...................................CGGTGCAAGTTTGATGGTCAATCAT............................................................................................................. 25 0 5 6.20 31 24 5 1 1
....................................GGTGCAAGTTTGATGGTCAATCAT............................................................................................................. 24 0 6 4.67 28 20 4 2 2
.............................................................................ACAAACACAATTCCCAATTACTTTGC.................................................................. 26 0 2 1.00 2 1 1 0 0
............................................................................GACAAACACAATTCCCAATTACTTTGC.................................................................. 27 0 2 1.00 2 1 1 0 0
...........................................................................TGACAAACACAATTCCCAATTACTTTGC.................................................................. 28 0 2 1.00 2 2 0 0 0
..................................TCGGTGCAAGTTTGATGGTCAATCAT............................................................................................................. 26 0 5 0.60 3 2 1 0 0
.............................................................................................................GATCGATGCTTACTTACTACCA...................................... 22 0 2 0.50 1 1 0 0 0
...............................................................................................................TCGATGCTTACTTACTACCACATAAG................................ 26 0 2 0.50 1 0 1 0 0
.............................................TTGATGGTCAATCATAATGACACCAACT................................................................................................ 28 0 2 0.50 1 1 0 0 0
...............................................................................................................TCGATGCTTACTTACTACCACAT................................... 23 0 2 0.50 1 1 0 0 0
..................................................GGTCAATCATAATGACACCA................................................................................................... 20 0 2 0.50 1 1 0 0 0
................................................................................................................CGATGCTTACTTACTACCACAT................................... 22 0 2 0.50 1 1 0 0 0
..............................................................................................................ATCGATGCTTACTTACTACCACAT................................... 24 0 2 0.50 1 1 0 0 0
................................................................ACACCAACTGATGACAAACACAA.................................................................................. 23 0 2 0.50 1 1 0 0 0
..........................................................................................................TTTGATCGATGCTTACTTACTACCACAT................................... 28 0 2 0.50 1 1 0 0 0
................................................................................AACACAATTCCCAATTACTTTGC.................................................................. 23 0 2 0.50 1 1 0 0 0
.....................................GTGCAAGTTTGATGGTCAATCAT............................................................................................................. 23 0 6 0.50 3 3 0 0 0
............................................................AATGACACCAACTGATGAC.......................................................................................... 19 0 2 0.50 1 1 0 0 0
....................................................................................................................................ATAAGTTCTGGTATATACG.................. 19 2 3 0.33 1 1 0 0 0
......................................................................................................................CTACTTACTACCACATAAGTACAGGT......................... 26 1 4 0.25 1 1 0 0 0
.......................................................................................................................TACTTACTACCACATAAGTACAGG.......................... 24 0 4 0.25 1 1 0 0 0
......................................................................................................................CTACTTACTACCACATAAGTACAGGCAT....................... 28 2 4 0.25 1 0 1 0 0
.......................................................................................................................TACTTACTACCACATAAGTACAGGTAT....................... 27 0 4 0.25 1 1 0 0 0
.......................................................................................................................TACTTACTACCACATAAGTACAGGTA........................ 26 0 4 0.25 1 1 0 0 0
............................CCGGCTTCGGTGCAAGTTTGATGG..................................................................................................................... 24 0 4 0.25 1 1 0 0 0
.........................................................................................................................CTTACTACCACATAAGTACAGGTAT....................... 25 0 4 0.25 1 1 0 0 0
................................CCTCGGTGCAAGTTTGATGGTCAATCAT............................................................................................................. 28 1 5 0.20 1 1 0 0 0
.....................................GTGCAAGTTTGATGGTCAATCATAAT.......................................................................................................... 26 0 5 0.20 1 1 0 0 0
.................................TTCGGTGCAAGTTTGATGGTCAATCAT............................................................................................................. 27 0 5 0.20 1 1 0 0 0
...........................................................................................CAATTACTTTGCCCGTTTGAT......................................................... 21 0 5 0.20 1 0 1 0 0
...................................CGGTGCAGGTTTGATGGTCAATCAT............................................................................................................. 25 1 6 0.17 1 0 0 1 0
...................................AGGTGCAAGTTTGATGGTCAATCAT............................................................................................................. 25 1 6 0.17 1 1 0 0 0
...........................ATCGGCTTCGGTGGAAGTTTG......................................................................................................................... 21 3 6 0.17 1 0 0 1 0
....................................GGTGCAAGTTTGATGGTCAATCA.............................................................................................................. 23 0 19 0.16 3 3 0 0 0
..................................CCGGTGCAAGTTTGATGGTCAATCAT............................................................................................................. 26 1 7 0.14 1 0 1 0 0
....................................GGTGCAGGTTTGATGGTCAATCAT............................................................................................................. 24 1 7 0.14 1 1 0 0 0
...................................CGGTGCAAGTTTGATGGTCAATCATCGA.......................................................................................................... 28 3 8 0.13 1 1 0 0 0
...................................CGGTGCAAGTTTGATGGTCAATCA.............................................................................................................. 24 0 14 0.07 1 1 0 0 0
...................................CGGTGCAAGTTTGATGGTCAAT................................................................................................................ 22 0 14 0.07 1 0 1 0 0
....................................................................................................................................ATAAGTTCTGGTATATACGT................. 20 3 20 0.05 1 1 0 0 0
....................................GGTGCAGGTTTGATGGTCAATCA.............................................................................................................. 23 1 20 0.05 1 1 0 0 0
...................................................................................................................................AATAAGTTCTGGTATATACG.................. 20 3 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6541:260557-260725 - dmo_247 GACGTTAGTGGGGATCATCCGGCGAACGGGCCGAAGCCACGTTCAAACTACCAGTTAGTATTACTGTGGTTGACTACTGTTTGTGTTAAGGGTTAATGAAACGGGCAAACTAGCTACGAATGAATGATGGTGTATTCATGTCCATATATGCTTACTTTATTCTAATAGA
droRho1 scf7180000761741:81-116 - GGTGTGGGTGTCGGTCAGCCCGGGATCGGCCAGCAG-------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
GACGTTAGTGGGGATCATCCGGCGAACGGGCCGAAGCCACGTTCAAACTACCAGTTAGTATTACTGTGGTTGACTACTGTTTGTGTTAAGGGTTAATGAAACGGGCAAACTAGCTACGAATGAATGATGGTGTATTCATGTCCATATATGCTTACTTTATTCTAATAGASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................................................................TAATGAAACGGGCAAACTAGCTACG...................................................25229.505914000441
..................................................CCAGTTAGTATTACTGTGGTTGACTAC............................................................................................27220.50416000350
..................................................CCAGTTAGTATTACTGTGGTTGACT..............................................................................................25217.503522100120
.............................................................................................TAATGAAACGGGCAAACTAGCTACGAA.................................................27210.50211800003
..................................................CCAGTTAGTATTACTGTGGTTGAC...............................................................................................2428.50177000100
.............................................................................................TAATGAAACGGGCAAACTAGCTAC....................................................2424.008400031
..CGTTAGTGGGGATCATCCGGCGAAC..............................................................................................................................................2523.507400030
............................................................................................................................TGATGGTGTATTCATGTCCATATATGC..................2723.507500020
..................................................CCAGTTAGTATTACTGTGGTTGACC..............................................................................................2523.006000060
.............................................................................................TAATGAAACGGGCAAACTAGCTACGA..................................................2623.006500010
..CGTTAGTGGGGATCATCCGGCGAA...............................................................................................................................................2422.505500000
..CGTTAGTGGGGATCATCCGGCG.................................................................................................................................................2222.505500000
..................................................CCAGTTAGTATTACTGTGGTTGACTA.............................................................................................2622.505410000
.............................................................................................TAATGAAACGGGCAAACTAGCTACGAAT................................................2822.004400000
...................................................CAGTTAGTATTACTGTGGTTGACTAC............................................................................................2621.503200010
.............................................................................................TAATGAAACGGGCAAACTAGCT......................................................2221.503200010
..CGTTAGTGGGGATCATCCGGCGAACGGG...........................................................................................................................................2821.002200000
..............................................................................................AATGAAACGGGCAAACTAGCTAC....................................................2321.002200000
.............................................................................................TAATGAAACGGGCAAACTAGC.......................................................2121.002000020
................................................................................TTGTGTTAAGGGTTAATGAAACGGGC...............................................................2621.002100001
........................................................................................................................TGAATGATGGTGTATTCATGTCCAT........................2541.004220000
..CGTTAGTGGGGATCATCCGG...................................................................................................................................................2021.002110000
GACGTTAGTGGGGATCATCCGGC..................................................................................................................................................2321.002100010
..............................................................................................AATGAAACGGGCAAACTAGCTACG...................................................2421.002000020
...................................................CAGTTAGTATTACTGTGGTTGACTA.............................................................................................2521.002200000
............................................................................................................................TGATGGTGTATTCATGTCCATATATG...................2621.002200000
...GTTAGTGGGGATCATCCGGCGAACGGG...........................................................................................................................................2721.002200000
........................................................................................................................TGAATGATGGTGTATTCATGTCCATATA.....................2840.753200010
........................................................................................................................TGAATGATGGTGTATTCATGTCCATA.......................2640.753300000
..........................................TCAAACTACCAGTTAGTATTACTG.......................................................................................................2430.672200000
.....................................................GTTAGTATTACTGTGGTTGACTAC............................................................................................2430.672100010
................................................................................................TGAAACGGGCAAACTAGCTACGAATG...............................................2620.501100000
.............................................................................................TAATGAAACGGGCAAACTAGCTACGCC.................................................2720.501100000
..............................................................................................AATGAAACGGGCAAACTAGCTA.....................................................2220.501100000
..CGTTAGTGGGGATCATCCGGC..................................................................................................................................................2120.501100000
................................................................................TTGTGTTAAGGGTTAATGAAACG..................................................................2320.501100000
..................................................CCAGTTAGTATTACTGTGGTTG.................................................................................................2220.501100000
.......................................................................................AAGGGTTAATGAAACGGGCAA.............................................................2120.501100000
.............................................................................................TAATGAAACGGGCAAACTAGCTA.....................................................2320.501000010
..........................................................................................GGTTAATGAAACGGGCAAACTAGCT......................................................2520.501000010
..................................................CCAGTTAGTATTACTGTGGTTGACTAAA...........................................................................................2820.501000010
..............................................................................GTTTGTGTTAAGGGTTAATGAA.....................................................................2220.501100000
.............................................................................................TAATGAAACGGGCAAACTAGCTACGT..................................................2620.501000010
...............................................................................................ATGAAACGGGCAAACTAGCTACG...................................................2320.501100000
..................................................CCAGTTAGTATTACTGTGGT...................................................................................................2020.501000010
.............................................................................................TAATGAAACGGGCAAACTAGCTACC...................................................2520.501000010
.ACGTTAGTGGGGATCATCCGGCG.................................................................................................................................................2320.501100000
..CGTTAGTGGGGATCATCCGGCC.................................................................................................................................................2220.501100000
..................................................CCAGTTAGTATTACTGTGGTTGACTG.............................................................................................2620.501100000
...................................................................................................................................GTATTCATGTCCATATATG...................1920.501100000
.......................................................TAGTATTACTGTGGTTGACTACTGT.........................................................................................2520.501100000
................................................................................................TGAAACGGGCAAACTAGCTACGAAT................................................2520.501100000
..............................................................................................AATGAAACGGGCAAACTAGCTACGAA.................................................2620.501100000
..................................................................TGGTTGACTACTGTTTGTGTTAAGGGT............................................................................2720.501100000
.............................................................................TGTTTGTGTTAAGGGTTAATGAAA....................................................................2420.501000001
..........................................TCAAACTACCAGTTAGTATTACTGTGG....................................................................................................2720.501100000
..CGTTAGTGGGGATCATCCGGCGAACG.............................................................................................................................................2620.501100000
.....................................................................TTGACTACTGTTTGTGTTAAGGGTA...........................................................................2520.501100000
........................................................................................................................................CATGTCCATATATGCTTACTTTATTC.......2620.501100000
..................................................CCAGTTAGTATTACTGTGGTTGA................................................................................................2320.501010000
..CGTTAGTGGGGATCATCCGGCGAACGGGC..........................................................................................................................................2920.501000010
..CGTTAGTGGGGATCATCCGGCGA................................................................................................................................................2320.501100000
.ACGTTAGTGGGGATCATCCGGCGA................................................................................................................................................2420.501100000
GACGTTAGTGGGGATCATCCGGCGAAC..............................................................................................................................................2720.501100000
................................................TACCAGTTAGTATTACTGTGGTTGACTAC............................................................................................2920.501000010
GACGTTAGTGGGGATCATCCGG...................................................................................................................................................2220.501000010
........................................................AGTATTACTGTGGTTGAC...............................................................................................1830.331000010
.........................................TTCAAACTACCAGTTAGTATTACTG.......................................................................................................2530.331100000
........................................................................................................................TGAATGATGGTGTATTCATGTCCATAT......................2740.251100000
.............................................................................................................................GATGGTGTATTCATGTCCATATAT....................2440.251100000
........................................................................................................................TGAATGATGGTGTATTCATGTCCA.........................2440.251100000
.................................................................................................................CTACGAATGAATGATGGTGTATTCATC.............................2740.251100000
.................................................................................................................CTACGAATGAATGATGGTGTATTCAT..............................2640.251000001
.................................................................................................................CTACGAATGAATGATGGTGTATTCA...............................2540.251100000
............................................................................................................................TGATGGTGTATTCATGTCCATATATC...................2640.251100000
.................TCCGGCGAACGGGCCGAAGCCACGTT..............................................................................................................................2640.251100000
............................................................................................TTAATGAAACGGGCAAACTATTA......................................................2350.201100000
..................................AGCCACGTTCAAACTACCAGTTAGTA.............................................................................................................2650.201100000
.............................................................................................TAATGAAACGGGCAAACT..........................................................1850.201100000
..................................AGCCACGTTCAAACTACCAGTTAGT..............................................................................................................25120.081100000
droRho1
GGTGTGGGTGTCGGTCAGCCCGGGATCGGCCAGCAG-------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads

Generated: 05/15/2015 at 03:00 PM