ID:

dmo_2402

 Coordinate:

scaffold_6680:8002455-8002518 -

 Confidence:

confident

 Class:

Mirtron

 Genomic Locale:

intron

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-17.2 -16.9 -16.9

Flybase annnotation

intron [Dmoj\GI12223-in]; CDS [Dmoj\GI12223-cds]; CDS [Dmoj\GI12223-cds]

No Repeatable elements found

Sense Strand Reads

GTCCATGGATCTCATCAAGAGCAATGAGTTGCTCCAAAACATGAGCGAAGGTAAACAGTCAATTGAGAATTGAGTATTATAGGAAAATAATACCAATCTATTTTCTGTTTACAGGAGAGCGTGAAGAGATTATTTTATATATTCAGCGCGTTAGTGCACGCCTA

**************************************************((((((((..(((..(((.(((.(((((((......))))))))))))))))..))))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M060

embryo

 V110

male body		 M046

female body

 V056

head

 V041

embryo

 V049

head
............................................................................................CCAATCTATTTTCTGTTTACAGT................................................. 23 1 1 5431.00 5431 4532 89 355 166 177 112
..................................................GTAAACAGTCAATTGAGAATTGAGTA........................................................................................ 26 0 1 2501.00 2501 420 875 228 537 297 144
............................................................................................CCAATCTATTTTCTGTTTACAGC................................................. 23 1 1 1016.00 1016 1010 1 5 0 0 0
..................................................GTAAACAGTCAATTGAGAATTGAGT......................................................................................... 25 0 1 567.00 567 237 196 28 39 49 18
............................................................................................CCAATCTATTTTCTGTTTACAG.................................................. 22 0 1 416.00 416 200 1 193 9 8 5
.............................................................................................CAATCTATTTTCTGTTTACAGT................................................. 22 1 1 267.00 267 197 5 47 4 8 6
............................................................................................CCAATCTATTTTCTGTTTACA................................................... 21 0 1 215.00 215 55 4 133 4 13 6
............................................................................................CCATTCTATTTTCTGTTTACAGT................................................. 23 2 1 152.00 152 152 0 0 0 0 0
............................................................................................CGAATCTATTTTCTGTTTACAGT................................................. 23 2 1 148.00 148 148 0 0 0 0 0
..................................................GTAAACAGTCAATTGAGAATTGAGTAA....................................................................................... 27 1 1 144.00 144 2 97 1 16 19 9
..................................................GTAAACAGTCAATTGAGAATTGAG.......................................................................................... 24 0 1 144.00 144 21 28 17 10 62 6
..................................................GGAAACAGTCAATTGAGAATTGAGTA........................................................................................ 26 1 1 144.00 144 140 0 0 4 0 0
..................................................GTAAACAGTCAATTGAGAATTGAGTC........................................................................................ 26 1 1 143.00 143 70 42 27 2 1 1
............................................................................................CCAATCTATTTTCTGTTTACAGA................................................. 23 1 1 81.00 81 60 0 17 1 3 0
..................................................GTAAACAGTCAATTGAGAATTGAGC......................................................................................... 25 1 1 71.00 71 67 2 0 0 2 0
..................................................GGAAACAGTCAATTGAGAATTGAGT......................................................................................... 25 1 1 44.00 44 44 0 0 0 0 0
..................................................GTAAACAGTCAATTGAGAATTGAGTAAA...................................................................................... 28 2 1 41.00 41 1 34 2 3 1 0
............................................................................................CCAATCTATTTTCTGTTTAC.................................................... 20 0 1 41.00 41 9 0 27 4 0 1
.............................................................................................CAATCTATTTTCTGTTTACAGC................................................. 22 1 1 39.00 39 39 0 0 0 0 0
............................................................................................CCAATCTATTTTCTGTTTACAC.................................................. 22 1 1 35.00 35 32 0 3 0 0 0
............................................................................................CCAATCTATTTTCTGTTTACAGTT................................................ 24 2 1 32.00 32 24 1 1 1 5 0
..............................................................................................AATCTATTTTCTGTTTACAGT................................................. 21 1 1 31.00 31 25 0 6 0 0 0
............................................................................................CTAATCTATTTTCTGTTTACAGT................................................. 23 2 1 30.00 30 28 0 0 0 1 1
............................................................................................TCAATCTATTTTCTGTTTACAGT................................................. 23 2 1 30.00 30 29 0 0 1 0 0
............................................................................................CGAATCTATTTTCTGTTTACAGC................................................. 23 2 1 29.00 29 29 0 0 0 0 0
............................................................................................CCAATCTATTTTCTGTTTACAGTC................................................ 24 2 1 29.00 29 9 7 10 0 3 0
............................................................................................CCAATCTCTTTTCTGTTTACAGT................................................. 23 2 1 28.00 28 26 0 1 0 0 1
..................................................GGAAACAGTCAATTGAGAATTGAGTC........................................................................................ 26 2 1 22.00 22 22 0 0 0 0 0
............................................................................................CCATTCTATTTTCTGTTTACAGC................................................. 23 2 1 19.00 19 19 0 0 0 0 0
............................................................................................CCAATCTATTTTCTGTTTACAGG................................................. 23 0 1 17.00 17 16 0 1 0 0 0
.............................................................................................CAATCTATTTTCTGTTTACAG.................................................. 21 0 1 17.00 17 1 0 15 0 1 0
............................................................................................CCAATCTATTTTATGTTTACAGT................................................. 23 2 1 17.00 17 17 0 0 0 0 0
..................................................GTAAACAGTCAATTGAGAATTGAGTCC....................................................................................... 27 2 1 17.00 17 9 7 0 1 0 0
...........................................................................................CCCAATCTATTTTCTGTTTACAGT................................................. 24 2 1 16.00 16 16 0 0 0 0 0
............................................................................................CCAATCTATTTTCTGTTTACAGTA................................................ 24 1 1 15.00 15 13 0 0 1 1 0
..................................................GGAAACAGTCAATTGAGAATTGAGC......................................................................................... 25 2 1 15.00 15 15 0 0 0 0 0
.............................................................................................CAATCTATTTTCTGTTTACA................................................... 20 0 1 14.00 14 0 0 14 0 0 0
..................................................GTAAACAGTCAATTGAGAATTG............................................................................................ 22 0 1 14.00 14 1 3 3 1 4 2
.............................................................................................CGATCTATTTTCTGTTTACAGT................................................. 22 2 1 12.00 12 12 0 0 0 0 0
..................................................GTAAACAGTCAATTGAGAATTGAGGA........................................................................................ 26 1 1 12.00 12 10 0 0 1 0 1
............................................................................................CCAATCTATTTTCTGCTTACAGT................................................. 23 2 1 11.00 11 10 0 1 0 0 0
............................................................................................CCCATCTATTTTCTGTTTACAGT................................................. 23 2 1 11.00 11 10 0 0 1 0 0
.................................................................................................CTATTTTCTGTTTACAGT................................................. 18 1 4 10.25 41 33 0 7 0 1 0
............................................................................................CCAATCTATTTTCTGTTTACACC................................................. 23 2 1 10.00 10 10 0 0 0 0 0
..................................................GTAAACAGTCAATTGAGAATTGAGCC........................................................................................ 26 2 1 10.00 10 8 2 0 0 0 0
............................................................................................CCAATCTATTTTCTGTTTACACT................................................. 23 2 1 10.00 10 7 0 1 1 0 1
.............................................................................................CAATCTATTTTCTGTTTACAGA................................................. 22 1 1 9.00 9 4 0 5 0 0 0
............................................................................................CCAATCTATTTTCTGTTTACAGTAA............................................... 25 2 1 9.00 9 5 0 4 0 0 0
............................................................................................CCAATCTATTTTCTTTTTACAGT................................................. 23 2 1 9.00 9 7 0 0 1 0 1
............................................................................................CCAATCTATTTTCTGTTTACATT................................................. 23 2 1 9.00 9 4 0 0 2 0 3
..................................................GTAAACAGTCAATTGAGAATTGA........................................................................................... 23 0 1 9.00 9 6 0 3 0 0 0
..................................................GTAAACAGTCAATTGAGAATTGAGTT........................................................................................ 26 1 1 9.00 9 3 0 1 1 4 0
............................................................................................CCAATTTATTTTCTGTTTACAGT................................................. 23 2 1 8.00 8 8 0 0 0 0 0
............................................................................................CCAATCTACTTTCTGTTTACAGT................................................. 23 2 1 8.00 8 7 0 0 1 0 0
............................................................................................CCATTCTATTTTCTGTTTACAG.................................................. 22 1 1 8.00 8 8 0 0 0 0 0
............................................................................................CCAATCTATTTTCTGTTTACAGAA................................................ 24 1 1 8.00 8 8 0 0 0 0 0
...............................................................................................ATCTATTTTCTGTTTACAGT................................................. 20 1 1 8.00 8 7 0 1 0 0 0
............................................................................................CTAATCTATTTTCTGTTTACAGC................................................. 23 2 1 8.00 8 8 0 0 0 0 0
..................................................GTAAACAGTCAATTGAGAAT.............................................................................................. 20 0 1 8.00 8 1 3 2 0 2 0
..................................................GTAAACAGTCAATTGAGAATTGAGTAT....................................................................................... 27 0 1 8.00 8 1 4 1 1 1 0
............................................................................................CCAATCTATTTCCTGTTTACAGT................................................. 23 2 1 8.00 8 8 0 0 0 0 0
..............................................................................................AATCTATTTTCTGTTTACAGC................................................. 21 1 1 8.00 8 8 0 0 0 0 0
............................................................................................CCAATCTATTTTCTGTTTTCAGT................................................. 23 2 1 8.00 8 8 0 0 0 0 0
....................................................AAACAGTCAATTGAGAATTGAGTA........................................................................................ 24 0 1 8.00 8 5 1 2 0 0 0
............................................................................................CCAATCTATTTTCTGTTTATAGT................................................. 23 2 1 7.00 7 7 0 0 0 0 0
............................................................................................CCAATCTATTTTCTGGTTACAGT................................................. 23 2 1 7.00 7 6 0 1 0 0 0
..................................................GTAAACAGTCAATTGAGAATTGAGTAC....................................................................................... 27 1 1 7.00 7 2 3 2 0 0 0
..................................................GTAAACAGTCAATTGAGCATTGAGTA........................................................................................ 26 1 1 7.00 7 0 0 0 0 4 3
..................................................GGAAACAGTCAATTGAGAATTGAG.......................................................................................... 24 1 1 6.00 6 5 0 0 0 1 0
............................................................................................CCAATCTATTTTCTGTTTACAT.................................................. 22 1 1 6.00 6 4 0 2 0 0 0
.....................................................AACAGTCAATTGAGAATTGAGTA........................................................................................ 23 0 1 6.00 6 6 0 0 0 0 0
...................................................TAAACAGTCAATTGAGAATTGAGTA........................................................................................ 25 0 1 6.00 6 0 0 6 0 0 0
............................................................................................CCAATCTATTTTCTGTTTACAGTAAA.............................................. 26 2 1 6.00 6 3 0 2 0 1 0
..................................................GTATACAGTCAATTGAGAATTGAGT......................................................................................... 25 1 1 6.00 6 6 0 0 0 0 0
............................................................................................CCAATCTATTTTCTGTTTACCGT................................................. 23 2 1 6.00 6 1 0 0 1 1 3
..................................................GTAAACAGTCAATTGCGAATTGAGTA........................................................................................ 26 1 1 6.00 6 0 0 0 2 4 0
..................................................GAAAACAGTCAATTGAGAATTGAGTA........................................................................................ 26 1 1 6.00 6 1 0 0 2 3 0
..................................................GTAAACAGTCAGTTGAGAATTGAGTA........................................................................................ 26 1 1 6.00 6 0 1 1 3 0 1
........................................................................................GATCCCAATCTATTTTCTGTTTACAGT................................................. 27 3 1 6.00 6 6 0 0 0 0 0
..................................................GTAAACAGTCCATTGAGAATTGAGTA........................................................................................ 26 1 1 5.00 5 4 0 0 0 0 1
....................................................AAACAGTCAATTGAGAATTGAGT......................................................................................... 23 0 1 5.00 5 3 2 0 0 0 0
..................................................GTAAACAGTCAATTGAGAATTTAGTA........................................................................................ 26 1 1 5.00 5 0 0 0 1 0 4
............................................................................................CGAATCTATTTTCTGTTTACAGA................................................. 23 2 1 5.00 5 5 0 0 0 0 0
..................................................GTAAACAGTCAATTGAGAATTGAGG......................................................................................... 25 1 1 5.00 5 5 0 0 0 0 0
............................................................................................CGAATCTATTTTCTGTTTACAG.................................................. 22 1 1 5.00 5 5 0 0 0 0 0
..................................................GCAAACAGTCAATTGAGAATTGAGTA........................................................................................ 26 1 1 5.00 5 2 3 0 0 0 0
..................................................GTAAACAGTCAATTGAGGATTGAGTA........................................................................................ 26 1 1 5.00 5 2 0 0 1 2 0
.............................................................................................CAATCTATTTTCTGTTTACAGTA................................................ 23 1 1 5.00 5 4 0 0 0 1 0
.................................................CGTAAACAGTCAATTGAGAATTGAGTA........................................................................................ 27 1 1 5.00 5 2 1 0 2 0 0
..................................................GTAAACAGTCAATTGAGAA............................................................................................... 19 0 1 5.00 5 2 1 1 0 1 0
..................................................GTATACAGTCAATTGAGAATTGAGTA........................................................................................ 26 1 1 5.00 5 5 0 0 0 0 0
............................................................................................CCATTCTATTTTCTGTTTACAGA................................................. 23 2 1 4.00 4 4 0 0 0 0 0
..................................................GTAAACAGTCAATTGAGAATTGAGTCCC...................................................................................... 28 3 1 4.00 4 1 2 1 0 0 0
..................................................GTAAACAGCCAATTGAGAATTGAGTA........................................................................................ 26 1 1 4.00 4 0 0 0 2 2 0
..................................................GTAAACAGTCACTTGAGAATTGAGTA........................................................................................ 26 1 1 4.00 4 0 0 0 1 2 1
............................................................................................CCAATCTATTCTCTGTTTACAGT................................................. 23 2 1 4.00 4 3 0 1 0 0 0
..................................................GGATACAGTCAATTGAGAATTGAGTA........................................................................................ 26 2 1 4.00 4 4 0 0 0 0 0
............................................................................................CCAATCTATTTTCTGTCTACAGT................................................. 23 2 1 4.00 4 4 0 0 0 0 0
............................................................................................CCAATCTCTTTTCTGTTTACAGC................................................. 23 2 2 4.00 8 8 0 0 0 0 0
............................................................................................CCAATCTATTTTCTGTTTATAGC................................................. 23 2 1 4.00 4 4 0 0 0 0 0
...........................................................................................CCCAATCTATTTTCTGTTTACAGC................................................. 24 2 1 4.00 4 4 0 0 0 0 0
............................................................................................GCAATCTATTTTCTGTTTACAGT................................................. 23 2 1 4.00 4 1 0 0 3 0 0
............................................................................................CCAATCTATTTTATGTTTACAGC................................................. 23 2 1 4.00 4 4 0 0 0 0 0
.......................................................CAGTCAATTGAGAATTGAGTA........................................................................................ 21 0 1 4.00 4 3 0 0 0 1 0
............................................................................................CCAATGTATTTTCTGTTTACAGT................................................. 23 2 1 4.00 4 4 0 0 0 0 0
..................................................GTAAACAGTCAATTGAGAATTGAGA......................................................................................... 25 1 1 4.00 4 2 0 1 0 1 0
............................................................................................CCAACCTATTTTCTGTTTACAGT................................................. 23 2 1 4.00 4 3 0 1 0 0 0
..................................................GTAAACAGTCAATTGAGAATTC............................................................................................ 22 1 1 4.00 4 1 3 0 0 0 0
.................................................................................................CTATTTTCTGTTTACAGC................................................. 18 1 3 3.67 11 11 0 0 0 0 0
......................................................ACAGTCAATTGAGAATTGAGTA........................................................................................ 22 0 1 3.00 3 3 0 0 0 0 0
.........................................................................................ATCCCAATCTATTTTCTGTTTACAGT................................................. 26 2 1 3.00 3 3 0 0 0 0 0
............................................................................................CCAATCTATTTTCTGTTTACAGAAA............................................... 25 2 1 3.00 3 2 0 1 0 0 0
...................................................TAAACAGTCAATTGAGAATTGAG.......................................................................................... 23 0 1 3.00 3 0 0 3 0 0 0
............................................................................................CCATTCTATTTTCTGTTTACAC.................................................. 22 2 1 3.00 3 3 0 0 0 0 0
...........................................................................................ACCAATCTATTTTCTGTTTACAG.................................................. 23 0 1 3.00 3 2 0 1 0 0 0
..................................................GTAAACAGTCATTTGAGAATTGAGTA........................................................................................ 26 1 1 3.00 3 0 1 0 1 0 1
..........................................................................................TCCCAATCTATTTTCTGTTTACAGT................................................. 25 2 1 3.00 3 3 0 0 0 0 0
..................................................GTAAACAGTCAATTGAGAATTGAC.......................................................................................... 24 1 1 3.00 3 3 0 0 0 0 0
..................................................GTAAACAGGCAATTGAGAATTGAGTA........................................................................................ 26 1 1 3.00 3 0 0 0 2 0 1
................................................................................................TCTATTTTCTGTTTACAGT................................................. 19 1 2 3.00 6 4 0 0 1 1 0
..................................................GTAAACAGTCAATTGAGAATTGAGTATT...................................................................................... 28 0 1 3.00 3 0 1 2 0 0 0
..................................................GTAAACAGTCAATTGAGAATTGATT......................................................................................... 25 1 1 3.00 3 1 1 0 1 0 0
..................................................GTAAACAGTCAATTGAGAATTGAGTAAAC..................................................................................... 29 3 1 3.00 3 1 1 1 0 0 0
..................................................GTAAACAGTCAATTGAGAATTGAGTAAAA..................................................................................... 29 2 1 3.00 3 0 3 0 0 0 0
..................................................GTAAACAGTCAATTGAGAATTTAGT......................................................................................... 25 1 1 3.00 3 2 0 0 0 0 1
............................................................................................CCAGTCTATTTTCTGTTTACAGT................................................. 23 2 1 3.00 3 3 0 0 0 0 0
............................................................................................CCAATCTATTTTCTGTTTACGGT................................................. 23 2 1 3.00 3 3 0 0 0 0 0
............................................................................................CCAATCGATTTTCTGTTTACAGT................................................. 23 2 1 3.00 3 3 0 0 0 0 0
............................................................................................CCGATCTATTTTCTGTTTACAGT................................................. 23 2 1 3.00 3 2 0 0 0 1 0
..................................................GTAAACAGTCAATCGAGAATTGAGTA........................................................................................ 26 1 1 3.00 3 1 1 0 0 1 0
..................................................GTAAGCAGTCAATTGAGAATTGAGTA........................................................................................ 26 1 1 3.00 3 0 2 0 1 0 0
............................................................................................CCAAGCTATTTTCTGTTTACAGT................................................. 23 2 1 3.00 3 2 0 1 0 0 0
..................................................GTAAACAGTCAATTTAGAATTGAGT......................................................................................... 25 1 1 3.00 3 0 2 1 0 0 0
.............................................................................................CAATCTATTTTCTGTTTAC.................................................... 19 0 1 3.00 3 1 0 2 0 0 0
..............................................................................................AATCTATTTTCTGTTTACAG.................................................. 20 0 1 3.00 3 2 0 1 0 0 0
............................................................................................CCAAACTATTTTCTGTTTACAGT................................................. 23 2 1 3.00 3 3 0 0 0 0 0
............................................................................................ACAATCTATTTTCTGTTTACAGT................................................. 23 2 1 3.00 3 1 0 0 1 0 1
............................................................................................CCATTCTATTTTCTGTTTACA................................................... 21 1 1 3.00 3 3 0 0 0 0 0
...............................................................................................ATCTATTTTCTGTTTACAG.................................................. 19 0 1 3.00 3 0 0 3 0 0 0
............................................................................................CCAATCTATTTTCTGTTCACAGC................................................. 23 2 1 3.00 3 2 0 1 0 0 0
............................................................................................CCAATCTATTTTCTGTTTGCAGT................................................. 23 2 1 3.00 3 2 0 1 0 0 0
............................................................................................CCAATCTATTTGCTGTTTACAGT................................................. 23 2 1 3.00 3 0 0 2 1 0 0
..................................................GGAAACAGTCAATTGAGAATTGAGCC........................................................................................ 26 3 2 2.50 5 5 0 0 0 0 0
GTCCATGGATCTCATCAAGAGC.............................................................................................................................................. 22 0 1 2.00 2 0 2 0 0 0 0
..................................................GTAAACAGTCAATTGAGAATTGAGTCA....................................................................................... 27 2 1 2.00 2 0 2 0 0 0 0
..................................................GTAAACAGTCCATTGAGAATTGAGT......................................................................................... 25 1 1 2.00 2 1 0 0 1 0 0
.............................................................................................CAATCGATTTTCTGTTTACAGT................................................. 22 2 1 2.00 2 2 0 0 0 0 0
..................................................GTAAACAGTCAATTGAGAATTCAGTA........................................................................................ 26 1 1 2.00 2 0 0 0 1 0 1
............................................................................................CCAATCTCTTTTCTGTTTACAGG................................................. 23 1 1 2.00 2 2 0 0 0 0 0
.............................................................................................CTATCTATTTTCTGTTTACAGC................................................. 22 2 1 2.00 2 2 0 0 0 0 0
.............................................................................................CAATCTATTTTCTGTTTACAC.................................................. 21 1 1 2.00 2 0 0 2 0 0 0
..................................................GGAAACAGTCAATTGAGAATTGAGTCC....................................................................................... 27 3 1 2.00 2 2 0 0 0 0 0
............................................................................................CCAATCTATTTGCTGTTTACA................................................... 21 1 1 2.00 2 0 0 2 0 0 0
...........................................................................................CGCAATCTATTTTCTGTTTACAGC................................................. 24 3 1 2.00 2 2 0 0 0 0 0
..................................................GGAAACAGTCAATTGAGAATTGAGGA........................................................................................ 26 2 1 2.00 2 2 0 0 0 0 0
..................................................GTAAACAGTCAATTGAGAATTGGGT......................................................................................... 25 1 1 2.00 2 2 0 0 0 0 0
..................................................GGAAACAGTCAATTGAGAATTGA........................................................................................... 23 1 1 2.00 2 2 0 0 0 0 0
...........................................................................................ACCAATCTATTTTCTGTTTACAGT................................................. 24 1 1 2.00 2 2 0 0 0 0 0
..................................................GTAAACAGTCAATTGGGAATTGAGTA........................................................................................ 26 1 1 2.00 2 0 0 0 1 1 0
..................................................GTAAACAGTCAATTGAGAACTGAGTA........................................................................................ 26 1 1 2.00 2 0 0 0 1 1 0
.............................................................................................CAACCTATTTTCTGTTTACAGT................................................. 22 2 2 2.00 4 4 0 0 0 0 0
............................................................................................CCAATCTATTTTCTCTTTACAGT................................................. 23 2 1 2.00 2 1 0 0 0 0 1
..................................................GTAAACAGTCAATTGAGAATTGCGTA........................................................................................ 26 1 1 2.00 2 0 1 0 0 1 0
..................................................GGAAACAGTCCATTGAGAATTGAGTC........................................................................................ 26 3 1 2.00 2 2 0 0 0 0 0
..................................................GTAAACAGTCAATTGAGAATTGACTA........................................................................................ 26 1 1 2.00 2 0 0 0 1 0 1
...............................................................................................ATCTATTTTCTGTTTACAGC................................................. 20 1 1 2.00 2 2 0 0 0 0 0
..................................................GCAAACAGTCAATTGAGAATTGAGTAA....................................................................................... 27 2 1 2.00 2 0 1 0 1 0 0
..................................................GTAAACAGCCAATTGAGAATTGAGT......................................................................................... 25 1 1 2.00 2 2 0 0 0 0 0
............................................................................................CCAATCTATTATCTGTTTACAGT................................................. 23 2 1 2.00 2 2 0 0 0 0 0
..................................................GGATACAGTCAATTGAGAATTGAG.......................................................................................... 24 2 1 2.00 2 2 0 0 0 0 0
..................................................GTAAACAGTCAATTGAAAATTGAGTA........................................................................................ 26 1 1 2.00 2 0 1 0 0 0 1
...................................................TAAACAGTCAATTGAGAATTGAGTC........................................................................................ 25 1 1 2.00 2 0 0 2 0 0 0
..................................................GTAAACAGTCAATTGAGTA............................................................................................... 19 1 1 2.00 2 1 1 0 0 0 0
............................................................................................CCAATCTATTTTCTGTTTACAA.................................................. 22 1 1 2.00 2 1 0 1 0 0 0
..................................................GTAAATAGTCAATTGAGAATTGAGTA........................................................................................ 26 1 1 2.00 2 1 1 0 0 0 0
..................................................TGAAACAGTCAATTGAGAATTGAGTC........................................................................................ 26 3 1 2.00 2 2 0 0 0 0 0
..................................................GTAAACAGTCAATTGTGAATTGAGTA........................................................................................ 26 1 1 2.00 2 0 1 0 0 1 0
..................................................GTAAACAGTCAATTGGGAATTGAGT......................................................................................... 25 1 1 2.00 2 0 0 1 0 1 0
....................................................AAACAGTCAATTGAGAATTGAGC......................................................................................... 23 1 1 2.00 2 2 0 0 0 0 0
............................................................................................CCAATCTATTTTCTGTTTA..................................................... 19 0 1 2.00 2 0 0 0 0 0 2
............................................................................................CCAATCTATTTTCTGTTTACAAT................................................. 23 2 1 2.00 2 2 0 0 0 0 0
............................................................................................CCAATCTATTTTCTGTTTACAAC................................................. 23 2 1 2.00 2 2 0 0 0 0 0
.............................................................................................CAAGCTATTTTCTGTTTACAGT................................................. 22 2 1 2.00 2 2 0 0 0 0 0
..................................................GTAAACAGTCAATTGAGAATTGAGTACC...................................................................................... 28 2 1 2.00 2 0 2 0 0 0 0
............................................................................................CCAATCTATTTTCTTTTTACAG.................................................. 22 1 1 2.00 2 1 0 0 0 0 1
............................................................................................TCAATCTATTTTCTGTTTACAGC................................................. 23 2 1 2.00 2 2 0 0 0 0 0
............................................................................................CCAATCTATTTTCCGTTTACAGT................................................. 23 2 1 2.00 2 2 0 0 0 0 0
............................................................................................CCAATCTATTTTCTGCTTACAG.................................................. 22 1 1 2.00 2 2 0 0 0 0 0
..................................................GTAAACAGTCAATTGAGAATTGAGCA........................................................................................ 26 1 1 2.00 2 0 0 0 2 0 0
............................................................................................CCAATCTATTTTCGGTTTACAGT................................................. 23 2 1 2.00 2 2 0 0 0 0 0
............................................................................................CGAATCTATTTTCTGTTTACAGTT................................................ 24 3 1 2.00 2 2 0 0 0 0 0
.............................................................................................CAATCTATTTTCTGTTTACAGTT................................................ 23 2 1 2.00 2 0 0 1 1 0 0
..................................................GTAACCAGTCAATTGAGAATTGAGTA........................................................................................ 26 1 1 2.00 2 0 0 0 1 0 1
............................................................................................CCAATCCATTTTCTGTTTACAGT................................................. 23 2 1 2.00 2 2 0 0 0 0 0
...................................................TAAACAGTCAATTGAGAATTGAGT......................................................................................... 24 0 1 2.00 2 0 0 2 0 0 0
........................................................AGTCAATTGAGAATTGAGTA........................................................................................ 20 0 1 2.00 2 2 0 0 0 0 0
..............................................................................................AATCTATTTTCTGTTTACA................................................... 19 0 1 2.00 2 0 0 2 0 0 0
..................................................GTAAACAGTCAATTGAGAATTGAGCCC....................................................................................... 27 3 1 2.00 2 2 0 0 0 0 0
..................................................GTAAACAGTCAATTGAGAATT............................................................................................. 21 0 1 2.00 2 0 0 2 0 0 0
............................................................................................CCAATCTACTTTCTGTTTACAGC................................................. 23 2 1 2.00 2 2 0 0 0 0 0
............................................................................................CCAATCTATTTTCTGTTTATAG.................................................. 22 1 1 2.00 2 1 0 0 1 0 0
..................................................GTAAACAGTCAATTTAGAATTGAGTA........................................................................................ 26 1 1 2.00 2 0 1 0 0 0 1
..................................................GTAAACAGTCAATTGAGAATTGATTA........................................................................................ 26 1 1 2.00 2 0 0 0 2 0 0
............................................................................................CCCATCTATTTTCTGTTTACA................................................... 21 1 1 2.00 2 2 0 0 0 0 0
............................................................................................CCCATCTATTTTCTGTTTACAGC................................................. 23 2 1 2.00 2 2 0 0 0 0 0
............................................................................................CCAATCTATCTTCTGTTTACAGT................................................. 23 2 1 2.00 2 2 0 0 0 0 0
..................................................GAAAACAGTCAATTGAGAATTGAGTAA....................................................................................... 27 2 1 2.00 2 0 1 0 1 0 0
.............................................................................................CAAACTATTTTCTGTTTACAGT................................................. 22 2 1 2.00 2 2 0 0 0 0 0
..................................................GTAAACAGTCAATTGAGAATCGAGTA........................................................................................ 26 1 1 2.00 2 0 1 0 0 1 0
..............................................................................................AATCTATTTTCTGTTTACAGA................................................. 21 1 1 2.00 2 1 0 1 0 0 0
............................................................................................CCATTCTATTTTCTGTTTACAGTA................................................ 24 2 1 2.00 2 2 0 0 0 0 0
............................................................................................CAAATCTATTTTCTGTTTACAGT................................................. 23 2 1 2.00 2 0 0 0 1 1 0
........................................................................................GATCCCAATCTATTTTCTGTTTACAGC................................................. 27 3 1 2.00 2 2 0 0 0 0 0
..................................................GTAAACCGTCAATTGAGAATTGAGTA........................................................................................ 26 1 1 2.00 2 0 0 0 1 0 1
..................................................GTACACAGTCAATTGAGAATTGAGTA........................................................................................ 26 1 1 2.00 2 0 0 0 1 0 1
.............................................................................................TAATCTATTTTCTGTTTACAGT................................................. 22 2 2 1.50 3 1 0 0 1 1 0
............................................................................................CGAATCTATTTTCTGTTTATAGC................................................. 23 3 1 1.00 1 1 0 0 0 0 0
..................................................GTAAACAGTCAATTGCGAATTGAGAA........................................................................................ 26 2 1 1.00 1 0 0 0 0 1 0
............................................................................................CGATTCTATTTTCTGTTTACAGT................................................. 23 3 2 1.00 2 2 0 0 0 0 0
..................................................GTAAACACTCAATTGAGAGTTGTGTA........................................................................................ 26 3 1 1.00 1 0 0 0 1 0 0
............................................................................................CCAATCTATTTTATGTTTACA................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..................................................GTAAACAGTCAATTGTGAATTGGGTA........................................................................................ 26 2 1 1.00 1 0 0 0 0 1 0
.......................................................CAGTCAATTGAGAATTGAGTC........................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................ACCAATCTATTTTCTGTTTACA................................................... 22 0 1 1.00 1 1 0 0 0 0 0
..................................................GTAAACAGTCAATTTAGAATTGAGTAA....................................................................................... 27 2 1 1.00 1 0 1 0 0 0 0
.................................................GATCAACAGTCAATTGAGAATTGAGTA........................................................................................ 27 2 1 1.00 1 1 0 0 0 0 0
..................................................GTAAACAGTCAATTGAGAATTTAGCA........................................................................................ 26 2 1 1.00 1 0 0 0 0 1 0
..................................................GTAAACAGTCAATTGAGAGTTGA........................................................................................... 23 1 1 1.00 1 0 0 1 0 0 0
............................................................................................CCAATCTATTTTCTGTTTTCAGC................................................. 23 2 1 1.00 1 1 0 0 0 0 0
............................................................................................CCAATCTATTTTCTGTTTACATA................................................. 23 2 1 1.00 1 1 0 0 0 0 0
........................................................................................GATCCCAATCTATTTTCTGTTTACAG.................................................. 26 2 1 1.00 1 1 0 0 0 0 0
............................................................................................CGAATCTATTTTCTGTTTACAGTAA............................................... 25 3 1 1.00 1 1 0 0 0 0 0
..................................................GTAAACAGTCAATTGAGCATTTAGTA........................................................................................ 26 2 1 1.00 1 0 0 0 0 1 0
..................................................GTAAACAGTCGATTGAGAATTGAGTA........................................................................................ 26 1 1 1.00 1 0 0 0 0 0 1
..................................................GAAAACAGTCAATTGAGAATTTACTA........................................................................................ 26 3 1 1.00 1 0 0 0 1 0 0
..................................................GTAAACGGTCAATTGAGTATTGAGT......................................................................................... 25 2 1 1.00 1 0 0 0 0 1 0
............................................................................................TCAATCTATTTTCTGTTTACAGTAAA.............................................. 26 3 1 1.00 1 1 0 0 0 0 0
............................................................................................CGAATCTATTTTCTGTCTACAGT................................................. 23 3 1 1.00 1 1 0 0 0 0 0
..................................................GTAAACAGTCAGTTGAGGATTGAGTA........................................................................................ 26 2 1 1.00 1 0 1 0 0 0 0
..................................................GTAAACAGTCAATTGAAAATTGAGGA........................................................................................ 26 2 1 1.00 1 1 0 0 0 0 0
............................................................................................CCAATCTATTTCCTGTTTACA................................................... 21 1 1 1.00 1 0 0 1 0 0 0
............................................................................................CCAATCTCTTTTCTGTTTACACT................................................. 23 3 1 1.00 1 1 0 0 0 0 0
............................................................................................CCAATCTATTCTCTGTTTACAGC................................................. 23 2 1 1.00 1 1 0 0 0 0 0
............................................................................................CCAATCTATCTTCTGTGTACAGT................................................. 23 3 1 1.00 1 0 0 0 0 1 0
..................................................GTAAACAGTCAATTGAGATTTGAGTA........................................................................................ 26 1 1 1.00 1 0 0 0 1 0 0
..................................................GTAAACAGTCAATTGAGAATTGCC.......................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0
..................................................GTAAACAGTCAATTGAGAATCC............................................................................................ 22 2 1 1.00 1 1 0 0 0 0 0
..................................................GTAAACAGTCAGTTGAGAATTGAGT......................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0
..................................................GAAAACAGTCAATTGAGAATTGAGT......................................................................................... 25 1 1 1.00 1 0 0 0 1 0 0
..................................................GGAAACAGTCAATTGTGAATTGAGTA........................................................................................ 26 2 1 1.00 1 0 0 0 1 0 0
..................................................GTAAACAGTCAATTGAGTATTGAGTA........................................................................................ 26 1 1 1.00 1 0 0 0 1 0 0
..............................................................................................AATCTATTTTCTGTTTACAGTA................................................ 22 1 1 1.00 1 0 0 1 0 0 0
............................................................................................CTAATCTATTTTCTGTTTACAGA................................................. 23 2 1 1.00 1 1 0 0 0 0 0
............................................................................................CCAATCTATTTTCTGATTACAGC................................................. 23 2 1 1.00 1 1 0 0 0 0 0
..................................................GGAAACAGTCAATTGAGAAGTGAGTA........................................................................................ 26 2 1 1.00 1 0 0 0 1 0 0
..................................................GTAAACAGTCAATTGAGACTTGAGTA........................................................................................ 26 1 1 1.00 1 0 1 0 0 0 0
............................................................................................CCAATCTATTTTCTGTTTACC................................................... 21 1 1 1.00 1 0 0 1 0 0 0
............................................................................................CCAATCTATTGTCTGCTTACAGT................................................. 23 3 1 1.00 1 0 0 0 1 0 0
..................................................GTAAACAGTCACTTGTGAATTGAGTA........................................................................................ 26 2 1 1.00 1 0 0 0 1 0 0
.............................................................................................CAATCTATTTTCTGTTTACAGTC................................................ 23 2 1 1.00 1 0 0 1 0 0 0
..................................................GTAAACAGACAATTGAGAATTGAGTA........................................................................................ 26 1 1 1.00 1 1 0 0 0 0 0
..................................................GCAAACAGTCAATTGAGAATTGAGT......................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0
..................................................TTAAACAGTCAATTGAGAATTGAGT......................................................................................... 25 1 1 1.00 1 1 0 0 0 0 0
..................................................GTAAACAGTCAATTGAGAACTGAGTCTC...................................................................................... 28 3 1 1.00 1 0 1 0 0 0 0
..................................................GAAAACAGTCAATTGAGAATTGAGTC........................................................................................ 26 2 1 1.00 1 0 0 0 0 1 0
..................................................GTAAACAGTCAATTGAGAATTGGGTA........................................................................................ 26 1 1 1.00 1 0 0 0 1 0 0
..................................................GGAAACAGTCAATTGAGAATTGATT......................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0
..................................................GAAAACAGTCAATTGAGAGTTGAGGA........................................................................................ 26 3 1 1.00 1 0 0 0 0 1 0
..................................................GTAAACAGTCAATTGAGAATTGAGTG........................................................................................ 26 1 1 1.00 1 0 1 0 0 0 0
..................................................GGAAACAGTCAATTGAGAATTGAGTAC....................................................................................... 27 2 1 1.00 1 0 0 0 1 0 0
............................................................................................CCAATCTAGTTTCTGTTTACAGC................................................. 23 2 1 1.00 1 1 0 0 0 0 0
...........................................................................................CGCAATCTATTTTCTGTTTACAGT................................................. 24 3 1 1.00 1 1 0 0 0 0 0
............................................................................................CCACTCTATTTTCTGTTTACAGT................................................. 23 2 1 1.00 1 0 0 0 1 0 0
..................................................GTAAACAGTCAATTAAGAATTTAGTA........................................................................................ 26 2 1 1.00 1 0 0 0 0 0 1
..................................................GTAAACAGTCAACTGAGAATTGAG.......................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0
..................................................GTAAACAGTCAATTGAGAATTGCGT......................................................................................... 25 1 1 1.00 1 0 0 0 0 0 1
...................................................TAAACAGTCAACTGAGAATTGAGTA........................................................................................ 25 1 1 1.00 1 0 0 1 0 0 0
............................................................................................CCAATCTATTTTCTGATTACAGT................................................. 23 2 1 1.00 1 0 0 1 0 0 0
..................................................GTAAACAGTCAATTGAGAAGTGCGTA........................................................................................ 26 2 1 1.00 1 0 0 0 0 0 1
................................................................................................TCTATTTTCTGTTTACAC.................................................. 18 1 1 1.00 1 1 0 0 0 0 0
..................................................GGAAACAGTCAATTGAGAATTGAGTCT....................................................................................... 27 2 1 1.00 1 1 0 0 0 0 0
..................................................GTAAACAGTCAATTGAGAATTTCG.......................................................................................... 24 2 1 1.00 1 0 0 0 1 0 0
............................................................................................CCAATCTATTTTCAGTTTACAGT................................................. 23 2 1 1.00 1 1 0 0 0 0 0
............................................................................................CCAATCTATTTTATCTTTACAGT................................................. 23 3 1 1.00 1 1 0 0 0 0 0
..................................................GTAAACAGTCAATTGAGAATTAAGTC........................................................................................ 26 2 1 1.00 1 1 0 0 0 0 0
............................................................................................CCAATCTCTTTTCTGTTTACAC.................................................. 22 2 1 1.00 1 1 0 0 0 0 0
..................................................GGAAACATTCAATTGAGAATTGAGTC........................................................................................ 26 3 1 1.00 1 1 0 0 0 0 0
.................................................CTTAAACAGTCAATTGAGAATTGAGTC........................................................................................ 27 3 1 1.00 1 1 0 0 0 0 0
............................................................................................CCAATCTATTTTCTGCTGACAGT................................................. 23 3 1 1.00 1 0 0 0 0 0 1
..................................................GTAAACTGTCAGTTGAGAATTTAGTA........................................................................................ 26 3 1 1.00 1 0 0 0 0 1 0
..................................................GGAAACAGTCAATTGAGTATTGAGGA........................................................................................ 26 3 1 1.00 1 0 0 0 0 0 1
..................................................GTAAGCAGTCAATTGAGAATTGAGC......................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0
..................................................GAAAACAGTCAATTGATACTTGAGTA........................................................................................ 26 3 1 1.00 1 0 0 0 0 0 1
..................................................GAAAACAGTCAATTGAGACTCGAGTA........................................................................................ 26 3 1 1.00 1 0 0 0 1 0 0
..................................................GAAAACAGTCAATTGAGAATTGAGTCC....................................................................................... 27 3 1 1.00 1 1 0 0 0 0 0
..................................................GTAAACAGTCAATTGAGAATTTAG.......................................................................................... 24 1 1 1.00 1 0 0 0 0 1 0
..................................................GTAAACAGTCAATTGAGAATTGAT.......................................................................................... 24 1 1 1.00 1 0 0 0 0 0 1
..................................................TAAAACAGTCAGTTGAGAATTGAGTA........................................................................................ 26 3 1 1.00 1 0 0 0 1 0 0
.............................................................................................CTATCTATTTTCTGTTTACAGT................................................. 22 2 1 1.00 1 1 0 0 0 0 0
.................................................CTCAAACAGTCAATTGAGAATTGAGTA........................................................................................ 27 3 1 1.00 1 1 0 0 0 0 0
............................................................................................CCAATCTATTTTATGTTTACAG.................................................. 22 1 1 1.00 1 1 0 0 0 0 0

Anti-sense strand reads

CAGGTACCTAGAGTAGTTCTCGTTACTCAACGAGGTTTTGTACTCGCTTCCATTTGTCAGTTAACTCTTAACTCATAATATCCTTTTATTATGGTTAGATAAAAGACAAATGTCCTCTCGCACTTCTCTAATAAAATATATAAGTCGCGCAATCACGTGCGGAT

**************************************************((((((((..(((..(((.(((.(((((((......))))))))))))))))..))))))))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total V049

head

 V056

head
............................................AGCTTCAATTTGCCAGTT...................................................................................................... 18 3 20 0.05 1 1 0
............................................................................................GGTCAGATAAAAGACAT....................................................... 17 2 20 0.05 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droMoj3 scaffold_6680:8002405-8002568 - dmo_2402 confident GTCCATGGATCTCATCAAGAGCAATGAGTTGCTCCAAAACATGAGCGAAGGTAAACAGT--------------------------------------------CA-------------------------------------------------------------------------A---TTGA------GAATTGAGTATTA---------------------------------------------TAG-------------------------------------GA----------AAATAATAC-CA--------A---TC--TATTTT-CTGTTTACAGGAGAGCGTGAAGAGATTATTTTATATATTCAGCGCGTTAGTGCACGCCTA
droVir3 scaffold_13049:20291595-20291759 - dvi_20739 GTCCATGGATCTCATCAAGAGCAACGAATTGCTGCAAAACATGAGTGAGGGTAAACAGA--------------------------------------------TTTTGAGTACAATGTAAAT------------------------------------------------------------TTG---------------------------------------------------------------------------------------------------------AAAAAC-TAA--ATTGGATAATCTA--TTTAAT------------------ACATAGGGGAGCGCGAGGAGATCATGTTGTACATTCAGCGCGTTAGTTCGCGCCTT
droGri2 scaffold_15110:16611261-16611432 + GTCCATGGATCTCATCAAGAGCAACGAAATGCTGCAAAATATGAGCGATGGTAATAATA---------------------------------------------------------------------------------AGACCCTTA-----------------------------------------------------AT--------------------------------------------------------------------------------ACA--GAA-CAT-TTA--AACGTTTAT-AAATCATCATT---TAC-TTTAATTTGTGACGCAGCCGAGCGCGAAGAGATTATGTTGTACATTCAGCGGGTTAGTGCTCGCCTT
droWil2 scf2_1100000004949:1844158-1844267 - GTCCATGGATCTCATCAAAAGCAATGAAATGCTACAGAACATGAGTGAAGGTAATAAAA---------------------------------------------------------------------------------------------------------------------------GTGA------AAAATATCTATTA---------------------------------------------GAC-------------------------------------TA-CAT-ATG--TACAT---------------A---CA--TA----------------------------------------------------TATACCGTATACA
dp5 XR_group6:236972-237146 + GTCTATGGATCTGATCAAGAGCAATGATAAGCTTCAGAAGATGAGAGAGTGTAAGTAGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTCACATAATACCTCACG--GAA-ACG-GGA--AACGGATAA-CAA--TGTAAT---CCC-TCTCT--TCCCCTGTAGCCGAGCGCGAGGAGATCATGTTGTACATACAGCGCGTCAGCTCACGCCTG
droPer2 scaffold_12:922864-923038 + GTCTATGGATCTGATCAAGAGCAATGATAAGCTTCAGAAGATGAGAGAGTGTAAGTAGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTCACATAATACCTCACG--GAA-AGG-GGA--AACGGATAA-CAA--TGTAAT---CCC-TCTCT--TCCCCTGTAGCCGAGCGCGAGGAGATCATGTTGTACATACAGCGCGTCAGCTCACGCCTG
droAna3 scaffold_13337:17347358-17347530 + GTCCATGGATCTAATCAAGACCAACGAAATGATGCAGAACATGAGCGAGGGTAAGGCTT---------------------------------------------------------------------------------AA------------------------------------A-----------------------------------------------------------------------------------------------ATTTCATACC--AGGTTG-ATT-TTA--AACAAATAG-TAACTTGCATT---TAT-TATATT-CTGATACTAGCTGAACAAGAAGAGATCATGTTGTATATTCAGCGAGTCAGCTCCCGGCTT
droBip1 scf7180000396741:648783-648938 + GTCCATTGATCTAATCAAGAGCAACGAAATGATGCAGAACATGAGCGAGGGTAAGCATT---------------------------------------------------------------------------------GC------------------------------------ATTT---------------------------------------------------------TCTATCAAAAGGGT--------------T----------------------------------------------A--TATATT---CAA-TCTCTT-CTTATACCAGCTGAACGGGAAGAGATTATGTTGTATATTCAGCGAGTCAGCTCCCGACTC
droKik1 scf7180000302686:1242198-1242424 + GTCCATGGATCTGATTAAGAGCAATGAAATGCTGCAGAATATGACCGAAGGTGAGAGAAAGGGACTAAAGATCTCGAAATAATAAGATGAGTAACGAATACGCATTATCGAA--------GTTACATCTATAACTTCTTTAC------------------------------------ATTT---------------------------------------------------------TC--------------------------------------TTTCC--ATATT---------AATT-------------TT---TATTTATATA--C--CTCATTTCAGCTGAACGCGAGGAGATCATGTTGTACATTCAGCGCGTCAGCTCACGCCTG
droFic1 scf7180000454065:1794625-1794784 + GTCCATGGATCTGATCAAGAGCAACGAAATGATGCAGAACATGAGCGAAGGTATGGATT---------------------------------------------------------------------------------GGT----TA-----------------------------A---CCAA------G--------------------------------------------------------AAA--------------TTATGTACATAATTCATTATC----------------------------------------A--CAACT--ATTTTTATAGCTGAACGTGAGGAGATCATGTTGTACATCCAGCGAGTAAGCTCACGTTTG
droEle1 scf7180000491000:903568-903631 - CTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--TTTCTTTCAGCTGAACGTGAGGAGATCATGTTGTATATACAGCGGGTTAGCTCACGTTTG
droRho1 scf7180000770847:5989-6060 - ACTAATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTAT--TTTATTTTAGCCGAACGCGAGGAGATCATGTTGTACATTCAGCGAGTTAGCTCACGTTTG
droBia1 scf7180000302334:881527-881584 + GTCCATGGATCTAATCAAGAGCAACGAAATGATGCAGAACATGAGCGAGGGTGAGAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415795:938032-938090 - GTCCATGGATCTGATCAAGAGCAACGAAATGATGCAGAACATGAGCGAGGGTGAGAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000408844:246318-246504 - GTCCATGGATCTAATCAAGAGCAACGAAATGATGCAGAACATGACCGAGGGTAAGAAGT--------------------------------------------GTTTTTGAACATTTTAGATCACTA------------------------------------CCCCATTTTGTTTAAGTTTTTG---------------------------------------------------------------------------------------------------------TTTTACT---AACT-------------TG---T---TCT-ACTCT--TTCCTTGCAGCTGAACGTGAGGAGATTATGTTGTACATTCAACGTGTTAGCTCACGCTTG
dm3 chr3L:15515246-15515509 - GTCCATGGATCTGATCAAGAGCAACGAAATGATGCAGAACATGAGCGAAGGTAAGTGACAGT-----------------------------------------G--------------------------------------ATTCTTAAAACTAATTTGAACCCTCA--TTGTTCA-----TAGCTTTACTAAAATGTGTATTATTTCGAAGTCGGAAGTAATGGTTTCTGATGACAAACTAAGTAAAGGGTTATTCATAGTTGACTG---------------------TG----------AGCTAATGT------TG---T---AC--CACCT--TCTTTTGCAGCTGAACGAGAGGAGATCATTTTGTACCTACAACGGGTGAGCTCTCGCTTG
droSim2 3l:15148805-15148877 - TAATAGTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCT--TCTTTTGCAGCTGAACGAGAGGAGATCATTTTGTACATACAGCGGGTGAGCTCTCGCTTG
droSec2 scaffold_0:7624627-7624699 - TAATAGTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCT--TCTTTTGCAGCTGAACGAGAGGAGATCATTTTGTACATACAGCGGGTGAGCTCTCGCTTG
droYak3 3L:18030836-18030908 - ACTAATTTATCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--CTTATTCCAGCCGAACGAGAGGAGATCATTTTGTACATACAGCGGGTTAGCACCCGCTTG
droEre2 scaffold_4784:17772850-17772921 - ACTAATTGATCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTTCCAGCTGAACGAGAGGAGATCATTTTGTACATACAGCGGGTTAGCTCCCGTTTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
GTCCATGGATCTCATCAAGAGCAATGAGTTGCTCCAAAACATGAGCGAAGGTAAACAGT--------------------------------------------CA-------------------------------------------------------------------------A---TTGA------GAATTGAGTATTA---------------------------------------------TAG-------------------------------------GA----------AAATAATAC-CA--------A---TC--TATTTT-CTGTTTACAGGAGAGCGTGAAGAGATTATTTTATATATTCAGCGCGTTAGTGCACGCCTASizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
......................................................................................................................................................................................................................................................................................................................C-CA--------A---TC--TATTTT-CTGTTTACAGT.................................................2315431.005431355177112166453289
..................................................GTAAACAGT--------------------------------------------CA-------------------------------------------------------------------------A---TTGA------GAATTGAGTA...................................................................................................................................................................................................2612501.002501228297144537420875
......................................................................................................................................................................................................................................................................................................................C-CA--------A---TC--TATTTT-CTGTTTACAGC.................................................2311016.001016500010101
..................................................GTAAACAGT--------------------------------------------CA-------------------------------------------------------------------------A---TTGA------GAATTGAGT....................................................................................................................................................................................................251567.0056728491839237196
......................................................................................................................................................................................................................................................................................................................C-CA--------A---TC--TATTTT-CTGTTTACAG..................................................221416.004161938592001
........................................................................................................................................................................................................................................................................................................................CA--------A---TC--TATTTT-CTGTTTACAGT.................................................221267.00267478641975
......................................................................................................................................................................................................................................................................................................................C-CA--------A---TC--TATTTT-CTGTTTACA...................................................211215.002151331364554
..................................................GTAAACAGT--------------------------------------------CA-------------------------------------------------------------------------A---TTGA------GAATTGAGTAA..................................................................................................................................................................................................271144.00144119916297
..................................................GTAAACAGT--------------------------------------------CA-------------------------------------------------------------------------A---TTGA------GAATTGAG.....................................................................................................................................................................................................241144.0014417626102128
..................................................GTAAACAGT--------------------------------------------CA-------------------------------------------------------------------------A---TTGA------GAATTGAGTC...................................................................................................................................................................................................261143.00143271127042
......................................................................................................................................................................................................................................................................................................................C-CA--------A---TC--TATTTT-CTGTTTACAGA.................................................23181.008117301600
..................................................GTAAACAGT--------------------------------------------CA-------------------------------------------------------------------------A---TTGA------GAATTGAGC....................................................................................................................................................................................................25171.00710200672
..................................................GTAAACAGT--------------------------------------------CA-------------------------------------------------------------------------A---TTGA------GAATTGAGTAAA.................................................................................................................................................................................................28141.00412103134
......................................................................................................................................................................................................................................................................................................................C-CA--------A---TC--TATTTT-CTGTTTAC....................................................20141.00412701490
........................................................................................................................................................................................................................................................................................................................CA--------A---TC--TATTTT-CTGTTTACAGC.................................................22139.00390000390
......................................................................................................................................................................................................................................................................................................................C-CA--------A---TC--TATTTT-CTGTTTACAC..................................................22135.00353000320
......................................................................................................................................................................................................................................................................................................................C-CA--------A---TC--TATTTT-CTGTTTACAGTT................................................24132.00321501241
.........................................................................................................................................................................................................................................................................................................................A--------A---TC--TATTTT-CTGTTTACAGT.................................................21131.00316000250
......................................................................................................................................................................................................................................................................................................................C-CA--------A---TC--TATTTT-CTGTTTACAGTC................................................24129.00291030097
......................................................................................................................................................................................................................................................................................................................C-CA--------A---TC--TATTTT-CTGTTTACAGG.................................................23117.00171000160
........................................................................................................................................................................................................................................................................................................................CA--------A---TC--TATTTT-CTGTTTACAG..................................................21117.00171510010
..................................................GTAAACAGT--------------------------------------------CA-------------------------------------------------------------------------A---TTGA------GAATTGAGTCC..................................................................................................................................................................................................27117.0017000197
........................................................................................................................................................................................................................................................................................................................CA--------A---TC--TATTTT-CTGTTTACA...................................................20114.00141400000
..................................................GTAAACAGT--------------------------------------------CA-------------------------------------------------------------------------A---TTGA------GAATTG.......................................................................................................................................................................................................22114.0014342113
.......................................................................................................................................................................................................................................................................................................................................C--TATTTT-CTGTTTACAGT.................................................18410.25417100330
......................................................................................................................................................................................................................................................................................................................C-CA--------A---TC--TATTTT-CTGTTTACACC.................................................23110.00100000100
..................................................GTAAACAGT--------------------------------------------CA-------------------------------------------------------------------------A---TTGA------GAATTGAGCC...................................................................................................................................................................................................26110.0010000082
......................................................................................................................................................................................................................................................................................................................C-CA--------A---TC--TATTTT-CTGTTTACACT.................................................23110.0010101170
........................................................................................................................................................................................................................................................................................................................CA--------A---TC--TATTTT-CTGTTTACAGA.................................................2219.009500040
......................................................................................................................................................................................................................................................................................................................C-CA--------A---TC--TATTTT-CTGTTTACATT.................................................2319.009003240
..................................................GTAAACAGT--------------------------------------------CA-------------------------------------------------------------------------A---TTGA------GAATTGA......................................................................................................................................................................................................2319.009300060
..................................................GTAAACAGT--------------------------------------------CA-------------------------------------------------------------------------A---TTGA------GAATTGAGTT...................................................................................................................................................................................................2619.009140130
..................................................................................................................................................................................................................................................................................................................................A---TC--TATTTT-CTGTTTACAGT.................................................2018.008100070
..................................................GTAAACAGT--------------------------------------------CA-------------------------------------------------------------------------A---TTGA------GAAT.........................................................................................................................................................................................................2018.008220013
..................................................GTAAACAGT--------------------------------------------CA-------------------------------------------------------------------------A---TTGA------GAATTGAGTAT..................................................................................................................................................................................................2718.008110114
.........................................................................................................................................................................................................................................................................................................................A--------A---TC--TATTTT-CTGTTTACAGC.................................................2118.008000080
....................................................AAACAGT--------------------------------------------CA-------------------------------------------------------------------------A---TTGA------GAATTGAGTA...................................................................................................................................................................................................2418.008200051
..................................................GTAAACAGT--------------------------------------------CA-------------------------------------------------------------------------A---TTGA------GAATTGAGTAC..................................................................................................................................................................................................2717.007200023
......................................................................................................................................................................................................................................................................................................................C-CA--------A---TC--TATTTT-CTGTTTACAT..................................................2216.006200040
.....................................................AACAGT--------------------------------------------CA-------------------------------------------------------------------------A---TTGA------GAATTGAGTA...................................................................................................................................................................................................2316.006000060
...................................................TAAACAGT--------------------------------------------CA-------------------------------------------------------------------------A---TTGA------GAATTGAGTA...................................................................................................................................................................................................2516.006600000
....................................................AAACAGT--------------------------------------------CA-------------------------------------------------------------------------A---TTGA------GAATTGAGT....................................................................................................................................................................................................2315.005000032
..................................................GTAAACAGT--------------------------------------------CA-------------------------------------------------------------------------A---TTGA------GAATTGAGG....................................................................................................................................................................................................2515.005000050
..................................................GTAAACAGT--------------------------------------------CA-------------------------------------------------------------------------A---TTGA------GAA..........................................................................................................................................................................................................1915.005110021
..................................................GTAAACAGT--------------------------------------------CA-------------------------------------------------------------------------A---TTGA------GAATTGAGTCCC.................................................................................................................................................................................................2814.004100012
.......................................................CAGT--------------------------------------------CA-------------------------------------------------------------------------A---TTGA------GAATTGAGTA...................................................................................................................................................................................................2114.004010030
..................................................GTAAACAGT--------------------------------------------CA-------------------------------------------------------------------------A---TTGA------GAATTGAGA....................................................................................................................................................................................................2514.004110020
..................................................GTAAACAGT--------------------------------------------CA-------------------------------------------------------------------------A---TTGA------GAATTC.......................................................................................................................................................................................................2214.004000013
.......................................................................................................................................................................................................................................................................................................................................C--TATTTT-CTGTTTACAGC.................................................1833.67110000110
......................................................ACAGT--------------------------------------------CA-------------------------------------------------------------------------A---TTGA------GAATTGAGTA...................................................................................................................................................................................................2213.003000030
...................................................TAAACAGT--------------------------------------------CA-------------------------------------------------------------------------A---TTGA------GAATTGAG.....................................................................................................................................................................................................2313.003300000
.....................................................................................................................................................................................................................................................................................................................AC-CA--------A---TC--TATTTT-CTGTTTACAG..................................................2313.003100020
..................................................GTAAACAGT--------------------------------------------CA-------------------------------------------------------------------------A---TTGA------GAATTGAC.....................................................................................................................................................................................................2413.003000030
......................................................................................................................................................................................................................................................................................................................................TC--TATTTT-CTGTTTACAGT.................................................1923.006010140
..................................................GTAAACAGT--------------------------------------------CA-------------------------------------------------------------------------A---TTGA------GAATTGAGTATT.................................................................................................................................................................................................2813.003200001
..................................................GTAAACAGT--------------------------------------------CA-------------------------------------------------------------------------A---TTGA------GAATTGAGTAAAC---------------------------------------------...................................................................................................................................................2913.003100011
........................................................................................................................................................................................................................................................................................................................CA--------A---TC--TATTTT-CTGTTTAC....................................................1913.003200010
.........................................................................................................................................................................................................................................................................................................................A--------A---TC--TATTTT-CTGTTTACAG..................................................2013.003100020
..................................................................................................................................................................................................................................................................................................................................A---TC--TATTTT-CTGTTTACAG..................................................1913.003300000
GTCCATGGATCTCATCAAGAGC.......................................................................................................................................................................................................................................................................................................................................................................................2212.002000002
..................................................GTAAACAGT--------------------------------------------CA-------------------------------------------------------------------------A---TTGA------GAATTGAGTCA..................................................................................................................................................................................................2712.002000002
........................................................................................................................................................................................................................................................................................................................CA--------A---TC--TATTTT-CTGTTTACAC..................................................2112.002200000
.....................................................................................................................................................................................................................................................................................................................AC-CA--------A---TC--TATTTT-CTGTTTACAGT.................................................2412.002000020
..................................................................................................................................................................................................................................................................................................................................A---TC--TATTTT-CTGTTTACAGC.................................................2012.002000020
...................................................TAAACAGT--------------------------------------------CA-------------------------------------------------------------------------A---TTGA------GAATTGAGTC...................................................................................................................................................................................................2512.002200000
......................................................................................................................................................................................................................................................................................................................C-CA--------A---TC--TATTTT-CTGTTTACAA..................................................2212.002100010
....................................................AAACAGT--------------------------------------------CA-------------------------------------------------------------------------A---TTGA------GAATTGAGC....................................................................................................................................................................................................2312.002000020
......................................................................................................................................................................................................................................................................................................................C-CA--------A---TC--TATTTT-CTGTTTA.....................................................1912.002002000
......................................................................................................................................................................................................................................................................................................................C-CA--------A---TC--TATTTT-CTGTTTACAAT.................................................2312.002000020
......................................................................................................................................................................................................................................................................................................................C-CA--------A---TC--TATTTT-CTGTTTACAAC.................................................2312.002000020
..................................................GTAAACAGT--------------------------------------------CA-------------------------------------------------------------------------A---TTGA------GAATTGAGTACC.................................................................................................................................................................................................2812.002000002
........................................................................................................................................................................................................................................................................................................................CA--------A---TC--TATTTT-CTGTTTACAGTT................................................2312.002100100
...................................................TAAACAGT--------------------------------------------CA-------------------------------------------------------------------------A---TTGA------GAATTGAGT....................................................................................................................................................................................................2412.002200000
........................................................AGT--------------------------------------------CA-------------------------------------------------------------------------A---TTGA------GAATTGAGTA...................................................................................................................................................................................................2012.002000020
.........................................................................................................................................................................................................................................................................................................................A--------A---TC--TATTTT-CTGTTTACA...................................................1912.002200000
..................................................GTAAACAGT--------------------------------------------CA-------------------------------------------------------------------------A---TTGA------GAATTGAGCCC..................................................................................................................................................................................................2712.002000020
..................................................GTAAACAGT--------------------------------------------CA-------------------------------------------------------------------------A---TTGA------GAATT........................................................................................................................................................................................................2112.002200000
.........................................................................................................................................................................................................................................................................................................................A--------A---TC--TATTTT-CTGTTTACAGA.................................................2112.002100010
.......................................................CAGT--------------------------------------------CA-------------------------------------------------------------------------A---TTGA------GAATTGAGTC...................................................................................................................................................................................................2111.001000010
.....................................................................................................................................................................................................................................................................................................................AC-CA--------A---TC--TATTTT-CTGTTTACA...................................................2211.001000010
......................................................................................................................................................................................................................................................................................................................C-CA--------A---TC--TATTTT-CTGTTTACATA.................................................2311.001000010
..................................................GTAAACAGT--------------------------------------------CA-------------------------------------------------------------------------A---TTGA------GAATTGCC.....................................................................................................................................................................................................2411.001000010
..................................................GTAAACAGT--------------------------------------------CA-------------------------------------------------------------------------A---TTGA------GAATCC.......................................................................................................................................................................................................2211.001000010
......................................................................................................................................................................................................................................................................................................................C-CA--------A---TC--TATTTT-CTGTTTACC...................................................2111.001100000
........................................................................................................................................................................................................................................................................................................................CA--------A---TC--TATTTT-CTGTTTACAGTC................................................2311.001100000
..................................................GTAAACAGT--------------------------------------------CA-------------------------------------------------------------------------A---TTGA------GAATTGAGTG...................................................................................................................................................................................................2611.001000001
......................................................................................................................................................................................................................................................................................................................................TC--TATTTT-CTGTTTACAC..................................................1811.001000010
..................................................GTAAACAGT--------------------------------------------CA-------------------------------------------------------------------------A---TTGA------GAATTGAT.....................................................................................................................................................................................................2411.001001000
droVir3
GTCCATGGATCTCATCAAGAGCAACGAATTGCTGCAAAACATGAGTGAGGGTAAACAGA--------------------------------------------TTTTGAGTACAATGTAAAT------------------------------------------------------------TTG---------------------------------------------------------------------------------------------------------AAAAAC-TAA--ATTGGATAATCTA--TTTAAT------------------ACATAGGGGAGCGCGAGGAGATCATGTTGTACATTCAGCGCGTTAGTTCGCGCCTTSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
..................................................................................................................................................................................................................................................................................................................................................................................TACATTCAGCGCGTTAGTTCGA.....2213.0030000000000000000000000000000000000000000000000000000000000000000300000000000000
...............................................................................................................................................................................................................................................................................................................................................................................TTGTACATTCAGCGCGTTAGTTCGC.....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000100000
.............................TGCTGCAAAACATGAGTGA.............................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
............................................GTGAGGGTAAACAGA--------------------------------------------TTTTGAGTACA...........................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
..CCATGGATCTCATCAAGAGCA......................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000010000000000000000000000000000000000000000000
..........CTCATCAAGAGCAACGAATTGCTGC..........................................................................................................................................................................................................................................................................................................................................................................2511.0010001000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GTAAACAGA--------------------------------------------TTTTGAGTACAATGT.......................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000001000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................TACATTCAGCGCGTTAGTTCG......2111.0010000000000001000000000000000000000000000000000000000000000000000000000000000000
.............ATCAAGAGCAACGAATTGCTG...........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000010000000000000000000000000000000000000000000000000000000
..............TCAAGAGCAACGAATTGCTGC..........................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000010000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................CATGTTGTACATTCAGCGCGT.............2111.0010000000000000000000000000000000010000000000000000000000000000000000000000000000
...CATGGATCTCATCAAGAGCAACGAA.................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000100000000000000000000000000000000000000000000000000000000
.TCCATGGATCTCATCAAGAGCAACGAAT................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000100000000000
droGri2
GTCCATGGATCTCATCAAGAGCAACGAAATGCTGCAAAATATGAGCGATGGTAATAATA---------------------------------------------------------------------------------AGACCCTTA-----------------------------------------------------AT--------------------------------------------------------------------------------ACA--GAA-CAT-TTA--AACGTTTAT-AAATCATCATT---TAC-TTTAATTTGTGACGCAGCCGAGCGCGAAGAGATTATGTTGTACATTCAGCGGGTTAGTGCTCGCCTTSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
No Reads
droWil2
GTCCATGGATCTCATCAAAAGCAATGAAATGCTACAGAACATGAGTGAAGGTAATAAAA---------------------------------------------------------------------------------------------------------------------------GTGA------AAAATATCTATTA---------------------------------------------GAC-------------------------------------TA-CAT-ATG--TACAT---------------A---CA--TA----------------------------------------------------TATACCGTATACASizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
...........TCATCAAAAGCAATGAAATGCTACAG........................................................................................................................................................................................................................................................................................................................................................................2611.00101000
..........................AAATGCTACAGAACATGAGTGAAGC..........................................................................................................................................................................................................................................................................................................................................................2511.00100010
dp5
GTCTATGGATCTGATCAAGAGCAATGATAAGCTTCAGAAGATGAGAGAGTGTAAGTAGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTCACATAATACCTCACG--GAA-ACG-GGA--AACGGATAA-CAA--TGTAAT---CCC-TCTCT--TCCCCTGTAGCCGAGCGCGAGGAGATCATGTTGTACATACAGCGCGTCAGCTCACGCCTGSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
...........................................................................................................................................................................................................................................................................................................................................................................CATGTTGTACATACAGCGCGTCAGCT........2611.0010100000000
droPer2
GTCTATGGATCTGATCAAGAGCAATGATAAGCTTCAGAAGATGAGAGAGTGTAAGTAGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTCACATAATACCTCACG--GAA-AGG-GGA--AACGGATAA-CAA--TGTAAT---CCC-TCTCT--TCCCCTGTAGCCGAGCGCGAGGAGATCATGTTGTACATACAGCGCGTCAGCTCACGCCTGSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
GTCTATGGATCTGATCAAGAGC.......................................................................................................................................................................................................................................................................................................................................................................................2213.003300000
.............................................................................................................................................................................................................................................................................................................................................................................TGTTGTACATACAGCGCGTCAGCT........2412.002110000
..........................ATAAGCTTCAGAAGATGAG................................................................................................................................................................................................................................................................................................................................................................1911.001000001
........................TGATAAGCTTCAGAAGATGAGAG..............................................................................................................................................................................................................................................................................................................................................................2311.001000001
.............................................................................................................................................................................................................................................................................................................................................................GAGCGCGAGGAGATCATGTTGTA.........................2311.001010000
droAna3
GTCCATGGATCTAATCAAGACCAACGAAATGATGCAGAACATGAGCGAGGGTAAGGCTT---------------------------------------------------------------------------------AA------------------------------------A-----------------------------------------------------------------------------------------------ATTTCATACC--AGGTTG-ATT-TTA--AACAAATAG-TAACTTGCATT---TAT-TATATT-CTGATACTAGCTGAACAAGAAGAGATCATGTTGTATATTCAGCGAGTCAGCTCCCGGCTTSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
..............................GATGCAGAACATGAGCGAGG...........................................................................................................................................................................................................................................................................................................................................................2011.001000001
..................................................................................................................................................................................................................................................................................................................................................................AGAAGAGATCATGTTGTATATTCA...................2411.001000010
..............................................................................................................................................................................................................................................................................................................................................................................GTTGTATATTCAGCGAGTCAGC.........2211.001000100
droBip1
GTCCATTGATCTAATCAAGAGCAACGAAATGATGCAGAACATGAGCGAGGGTAAGCATT---------------------------------------------------------------------------------GC------------------------------------ATTT---------------------------------------------------------TCTATCAAAAGGGT--------------T----------------------------------------------A--TATATT---CAA-TCTCTT-CTTATACCAGCTGAACGGGAAGAGATTATGTTGTATATTCAGCGAGTCAGCTCCCGACTCSizeHit CountTotal NormTotal
No Reads
droKik1
GTCCATGGATCTGATTAAGAGCAATGAAATGCTGCAGAATATGACCGAAGGTGAGAGAAAGGGACTAAAGATCTCGAAATAATAAGATGAGTAACGAATACGCATTATCGAA--------GTTACATCTATAACTTCTTTAC------------------------------------ATTT---------------------------------------------------------TC--------------------------------------TTTCC--ATATT---------AATT-------------TT---TATTTATATA--C--CTCATTTCAGCTGAACGCGAGGAGATCATGTTGTACATTCAGCGCGTCAGCTCACGCCTGSizeHit CountTotal NormTotal
No Reads
droFic1
GTCCATGGATCTGATCAAGAGCAACGAAATGATGCAGAACATGAGCGAAGGTATGGATT---------------------------------------------------------------------------------GGT----TA-----------------------------A---CCAA------G--------------------------------------------------------AAA--------------TTATGTACATAATTCATTATC----------------------------------------A--CAACT--ATTTTTATAGCTGAACGTGAGGAGATCATGTTGTACATCCAGCGAGTAAGCTCACGTTTGSizeHit CountTotal NormTotal
No Reads
droEle1
CTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--TTTCTTTCAGCTGAACGTGAGGAGATCATGTTGTATATACAGCGGGTTAGCTCACGTTTGSizeHit CountTotal NormTotal
No Reads
droRho1
ACTAATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTAT--TTTATTTTAGCCGAACGCGAGGAGATCATGTTGTACATTCAGCGAGTTAGCTCACGTTTGSizeHit CountTotal NormTotal
No Reads
droBia1
GTCCATGGATCTAATCAAGAGCAACGAAATGATGCAGAACATGAGCGAGGGTGAGAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
GTCCATGGATCTGATCAAGAGCAACGAAATGATGCAGAACATGAGCGAGGGTGAGAAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
GTCCATGGATCTAATCAAGAGCAACGAAATGATGCAGAACATGACCGAGGGTAAGAAGT--------------------------------------------GTTTTTGAACATTTTAGATCACTA------------------------------------CCCCATTTTGTTTAAGTTTTTG---------------------------------------------------------------------------------------------------------TTTTACT---AACT-------------TG---T---TCT-ACTCT--TTCCTTGCAGCTGAACGTGAGGAGATTATGTTGTACATTCAACGTGTTAGCTCACGCTTGSizeHit CountTotal NormTotal
No Reads
dm3
GTCCATGGATCTGATCAAGAGCAACGAAATGATGCAGAACATGAGCGAAGGTAAGTGACAGT-----------------------------------------G--------------------------------------ATTCTTAAAACTAATTTGAACCCTCA--TTGTTCA-----TAGCTTTACTAAAATGTGTATTATTTCGAAGTCGGAAGTAATGGTTTCTGATGACAAACTAAGTAAAGGGTTATTCATAGTTGACTG---------------------TG----------AGCTAATGT------TG---T---AC--CACCT--TCTTTTGCAGCTGAACGAGAGGAGATCATTTTGTACCTACAACGGGTGAGCTCTCGCTTGSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
...........................AATGATGCAGAACATGAGCGA.............................................................................................................................................................................................................................................................................................................................................................2118.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....ATGGATCTGATCAAGAGCAAC....................................................................................................................................................................................................................................................................................................................................................................................2118.008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000034000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TCTGATCAAGAGCAACGAAATGATGCA.........................................................................................................................................................................................................................................................................................................................................................................2715.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................AAGAGCAACGAAATGATGC..........................................................................................................................................................................................................................................................................................................................................................................1915.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................TACCTACAACGGGTGAGCTC.......2015.005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................TTGTACCTACAACGGGTGAGC.........2114.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000100000000000000000000000000000000000
.................................................................................................................................................................ACCCTCA--TTGTTCA-----TAGCTTT................................................................................................................................................................................................................2113.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TTTTGTACCTACAACGGGTGAGC.........2313.003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................AACGAGAGGAGATCATTTTGTA.........................2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................GAACGAGAGGAGATCATTTTGT..........................2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................TTGTACCTACAACGGGTGAGCTCTCGC...2712.002000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.........................................................................................................................................................................................................................................................................................................................................................AGCTGAACGAGAGGAGATC.................................1912.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................CTGAACGAGAGGAGATCATTT.............................2112.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................AGCTGAACGAGAGGAGATCA................................2012.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
...............CAAGAGCAACGAAATGATGCAGAACA....................................................................................................................................................................................................................................................................................................................................................................2612.002000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................CAACGGGTGAGCTCTCGCTTG2112.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................TGTACCTACAACGGGTGAGCT........2112.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................AGCTGAACGAGAGGAGATCAT...............................2112.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................AACGAAATGATGCAGAAC.....................................................................................................................................................................................................................................................................................................................................................................1812.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................AAGAGCAACGAAATGATGCAGAAC.....................................................................................................................................................................................................................................................................................................................................................................2412.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................TTTGTACCTACAACGGGTGAGC.........2212.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................GTACCTACAACGGGTGAGCTCTCGC...2512.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..CCATGGATCTGATCAAGAGCAACG...................................................................................................................................................................................................................................................................................................................................................................................2412.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GAAATGATGCAGAACATGAGC...............................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..............TCAAGAGCAACGAAATGATGCAGAA......................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................GGAGATCATTTTGTACCCT.....................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................TGTACCTACAACGGGTGAGCTCTCG....2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....ATGGATCTGATCAAGAGCA......................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................ACCTACAACGGGTGAGCTCTCGC...2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................AGCAACGAAATGATGCAGA.......................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................AAGAGCAACGAAATGATGCA.........................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................CCTACAACGGGTGAGCTCTC.....2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......GATCTGATCAAGAGCAAC....................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GAAATGATGCAGAACATGAGCGAA............................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................GAACGAGAGGAGATCATTTTG...........................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..........................AAATGATGCAGAACATGAGCGC.............................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................TGAACGAGAGGAGATCATTTTGTACC.......................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................TGT------TG---T---AC--CACCT--TCTTTTGC....................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................ACGAAATGATGCAGAACATGAGCGA.............................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AGAGCAACGAAATGATGCA.........................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TCTGATCAAGAGCAACGAAATGAT............................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................CCTACAACGGGTGAGCTCTCGT...2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.............................TGATGCAGAACATGAGCGAAG...........................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................CTACAACGGGTGAGCTCTCG....2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
........ATCTGATCAAGAGCAACGAAATGATG...........................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GCAACGAAATGATGCAGAACATGAGC...............................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GAGCAACGAAATGATGCAA........................................................................................................................................................................................................................................................................................................................................................................1921.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TTTTGTACCTACAACGGGTGAGCTTGT.....2711.001000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................GATGCAGAACATGAGCGAAGC..........................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................CAACGGGTGAGCTCTCGC...1811.001000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TGGATCTGATCAAGAGCAAC....................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................TTGTACCTACAACGGGTGAGCTCT......2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................CTGAACGAGAGGAGATCATT..............................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................GTACCTACAACGGGTGAGCTCC......2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.....TGGATCTGATCAAGAGCAACG...................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................ACAACGGGTGAGCTCTCGC...1911.001000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................ACGAAATGATGCAGAACATGA.................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............CAAGAGCAACGAAATGAT............................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................TCATTTTGTACCTACAACGGGTGAGC.........2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................TACAACGGGTGAGCTCTCGCT..2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................ATCATTTTGTACCTACAACGGA..............2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..................GAGCAACGAAATGATGCAGAACATGA.................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................GCAACGAAATGATGCAGAACATGAGCGA.............................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................AGCTGAACGAGAGGAGATCATTTTGTAC........................2811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................AACGGGTGAGCTCTCGCT..1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................GTACCTACAACGGGTGAGC.........1911.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................CGAGAGGAGATCATTTTGTAC........................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
............................ATGATGCAGAACATGAGCGA.............................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................AGCTGAACGAGAGGAGATCATT..............................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
..............................GATGCAGAACATGAGCGAAGG..........................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000
...........................AATGATGCAGAACATGAGCGC.............................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TTTTGTACCTACAACGGGTGAG..........2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.....TGGATCTGATCAAGAGCAACGAAATGA.............................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....TGGATCTGATCAAGAGCAACGAAA................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
....................GCAACGAAATGATGCAGAACATG..................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TCTGATCAAGAGCAACGAAATGATGCAGA.......................................................................................................................................................................................................................................................................................................................................................................2911.001000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................TTTGTACCTACAACGGGTGAGCTCTCG....2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..........CTGATCAAGAGCAACGAAATGATGCA.........................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................TACAACGGGTGAGCTCTCGCTTG2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................CCTACAACGGGTGAGCTCTCG....2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................TGTACCTACAACGGGTGAGCTCT......2311.001000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................TACCTACAACGGGTGAGCTCT......2111.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
......................AACGAAATGATGCAGAACATGAGCGAA............................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TTTTGTACCTACAACGGGTGAGCTCTCG....2811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................TGAACGAGAGGAGATCATTTTG...........................2211.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................CTACAACGGGTGAGCTCTCGCTT.2311.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
................................TGCAGAACATGAGCGAAG...........................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
droSim2
TAATAGTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCT--TCTTTTGCAGCTGAACGAGAGGAGATCATTTTGTACATACAGCGGGTGAGCTCTCGCTTGSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
...................................................................................................................................................................................................................................................................................................................................................................................ACATACAGCGGGTGAGCTCTC.....2111.00100000001000000000
.............................................................................................................................................................................................................................................................................................................................................................................TTTTGTACATACAGCGGG..............1811.00100000001000000000
.............................................................................................................................................................................................................................................................................................................................................................................TTTTGTACATACAGCGGGTGAGCTCT......2611.00100000000001000000
.............................................................................................................................................................................................................................................................................................................................................................................................GGTGAGCTCTCGCTG.1550.60300000000210000000
droSec2
TAATAGTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCT--TCTTTTGCAGCTGAACGAGAGGAGATCATTTTGTACATACAGCGGGTGAGCTCTCGCTTGSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
No Reads
droYak3
ACTAATTTATCC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--CTTATTCCAGCCGAACGAGAGGAGATCATTTTGTACATACAGCGGGTTAGCACCCGCTTGSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.............................................................................................................................................................................................................................................................................................................................................................GAACGAGAGGAGATCATTTTGTA.........................2320.50100100000000
droEre2
ACTAATTGATCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTTTTCCAGCTGAACGAGAGGAGATCATTTTGTACATACAGCGGGTTAGCTCCCGTTTGSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................TCATTTTGTACATACAGCGGGTTAGC.........2611.0011000000
............................................................................................................................................................................................................................................................................................................................................................................ATTTTGTACATACAGCGGGTT............2111.0010000010

Generated: 10/20/2015 at 07:10 PM