ID:

dmo_2391

 Coordinate:

scaffold_6680:6742620-6742700 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-17.7 -17.4 -17.4 -17.2

Flybase annnotation

intron [Dmoj\GI13046-in]; exon [dmoj_GLEANR_13003:2]; CDS [Dmoj\GI13046-cds]; CDS [Dmoj\GI13046-cds]; exon [dmoj_GLEANR_13003:1]; intron [Dmoj\GI13046-in]

Repeatable elements

NameClassFamilyStrand
(CAG)nSimple_repeatSimple_repeat+
(CAG)nSimple_repeatSimple_repeat+
mature
  1. scaffold_6359:3960401-3960422 +
  2. scaffold_6473:421066-421087 +
  3. scaffold_6473:10474117-10474138 +
  4. scaffold_6473:12493495-12493516 +
  5. scaffold_6473:12554614-12554635 +
  6. scaffold_6496:9889540-9889561 +
  7. scaffold_6496:17290002-17290023 +
  8. scaffold_6496:17342000-17342021 +
  9. scaffold_6496:18206283-18206304 +
  10. scaffold_6496:22351259-22351280 +
  11. scaffold_6500:21414350-21414371 +
  12. scaffold_6540:1705366-1705387 +
  13. scaffold_6540:32091769-32091790 +
  14. scaffold_6654:2479510-2479531 +
  15. scaffold_6680:4673432-4673453 +
  16. dmo_2391  scaffold_6680:6742649-6742670 +
  17. scaffold_6680:7360185-7360206 +
  18. scaffold_6680:9020325-9020346 +
  19. scaffold_6680:13244946-13244967 +
  20. scaffold_6680:16075207-16075228 +
  21. scaffold_6328:3657189-3657210 +
  22. scaffold_6473:4929479-4929500 +
  23. scaffold_6473:6062378-6062399 +
  24. scaffold_6473:7668534-7668555 +
  25. scaffold_6473:9188230-9188251 +
  26. scaffold_6473:10814920-10814941 +
  27. scaffold_6473:10898552-10898573 +
  28. scaffold_6473:14628067-14628088 +
  29. scaffold_6473:15646906-15646927 +
  30. scaffold_6496:12365803-12365824 +
  31. scaffold_6496:13324603-13324624 +
  32. scaffold_6500:5157134-5157155 +
  33. scaffold_6500:12034723-12034744 +
  34. scaffold_6500:12171503-12171524 +
  35. scaffold_6540:7624269-7624290 +
  36. scaffold_6540:31055113-31055134 +
  37. scaffold_6680:4660023-4660044 +
  38. scaffold_6680:7022200-7022221 +
  39. scaffold_6680:8884580-8884601 +
  40. scaffold_6680:11173069-11173090 +
  41. scaffold_6359:4337838-4337859 -
  42. scaffold_6473:2419533-2419554 -
  43. scaffold_6473:4133931-4133952 -
  44. scaffold_6473:5284890-5284911 -
  45. scaffold_6473:5990756-5990777 -
  46. scaffold_6473:9847870-9847891 -
  47. scaffold_6473:12230379-12230400 -
  48. scaffold_6473:15485859-15485880 -
  49. scaffold_6482:1486701-1486722 -
  50. scaffold_6496:1466718-1466739 -
  51. scaffold_6496:7785331-7785352 -
  52. scaffold_6496:9498813-9498834 -
  53. scaffold_6500:1775561-1775582 -
  54. scaffold_6500:9546184-9546205 -
  55. scaffold_6500:20342482-20342503 -
  56. scaffold_6500:22300633-22300654 -
  57. scaffold_6500:26825781-26825802 -
  58. scaffold_6540:13905467-13905488 -
  59. scaffold_6680:14671858-14671879 -
  60. scaffold_6680:22185256-22185277 -
star

Sense Strand Reads

##################################################---------------------------------------------------------------------------------############################----------------------
AGCCAGCCACAGTCACAGCCATAGCAACAGCAACAGCAGCAGCAGCAGCAGTCGAGGCAATGTACCAATTTCGATTGTCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGGCGGCATCAGCCTCAAATGCACGCGACAAGCGAGGTAAGTACTTGATAGCTATTCCATCG
**************************************************..................(((((....(((.((.((.((.((.((.......)).)).)).)).)).)))..)))....))************************************************** 		Read size # Mismatch Hit Count Total Norm Total V041
embryo
 M046
female body
...............................................................................CAGCAGCAGCAGCAGCAGCAGC................................................................................ 22 0 20 0.10 2 0 2
....................ATAGCAACAGCAACAGCAGCAGC.......................................................................................................................................... 23 0 17 0.06 1 0 1
........................CAACAGCAACAGCAGCAGCA......................................................................................................................................... 20 0 20 0.05 1 1 0
.........................AACAGCAACAGCAGCAGCA......................................................................................................................................... 19 0 20 0.05 1 1 0
............................AGCAACAGCAGCAGCAGCA...................................................................................................................................... 19 0 20 0.05 1 1 0
.......................GCAACAGCAACAGCAGCAGCAGCA...................................................................................................................................... 24 0 20 0.05 1 1 0
...................................................................................................GCAGCAGCAGCAGCAGCAGG.............................................................. 20 0 20 0.05 1 1 0
..................................AGCAGCAGCAGCAGCAGTCGA.............................................................................................................................. 21 0 20 0.05 1 0 1
..............................CAACAGCAGCAGCAGCAGCA................................................................................................................................... 20 0 20 0.05 1 1 0

Anti-sense strand reads

TCGGTCGGTGTCAGTGTCGGTATCGTTGTCGTTGTCGTCGTCGTCGTCGTCAGCTCCGTTACATGGTTAAAGCTAACAGGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCCTCCGCCGTAGTCGGAGTTTACGTGCGCTGTTCGCTCCATTCATGAACTATCGATAAGGTAGC
**************************************************..................(((((....(((.((.((.((.((.((.......)).)).)).)).)).)))..)))....))************************************************** 		Read size # Mismatch Hit Count Total Norm Total V110
male body		 V049
head
...........................................................................................................................CCGTCGTCGGAGTCTACATG...................................... 20 3 14 0.07 1 1 0
.....................................................................................................................................................TCTCTCCATTCTTCAACTAT............ 20 3 20 0.05 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6680:6742570-6742750 + dmo_2391 AGCC--A-----GC----------------CAC---AG---TCACA---GCC---ATAGCAACAGCAACAG--------CA---G-----------------------------------------------------CAGCAGCAGCAGTCGAGGCAAT-GTACCAA--------------------------------------------------TTTCGATTGTC---------CAGCAGCA---GCAG-C---AGCA---GC-----AGC-----------------------------AGCAGCAGCA---------------------GCA---------------------------------------GCA------------------------------------------GGAGGCGGCATCA-----------------------GCCTCAAATGCACGCGA-------------------------------------------------------------------CAAGCGAGGT------------AAGTACTTGATAGCTATTCCATCG
droVir3 scaffold_13049:1701842-1702003 + AGCAGCA------------------------GC---AG---CAACA---GCA---ACAACAACAGCAA-----------CA---A-----------------------------------------------------CAGCAACAACAG---CA-------------------GCA---------CCAACAG------------------------------------CACCAA---CAGCAGCA---GCAG-C---A--------GCAG---------------------------CA--ACAGCAGCGGGA---------------------ACA---------------------------------------GCAGCGCGAGCAGCAGCAGCAGGCACA---------------------------------------------------------------------------------G-----------CAG---------CAG--------G---C-TCAGAGC-----------------------TA-------------TGACAAATATTCGGCGG
droGri2 scaffold_14853:6290695-6290875 - AGCAGTA------------------------TC---AG---CAGCA---GCA---GCAGCAGCAGCAG-----------CA---G-----------------------------------------------------CAGCAGCAGCAGCAGCAGCAGCAGCA----------GCA---------GCAGCAG------------------------------------CATCAA---CAGCATCAGCAGCA-GCAGCA--------GCAGCAGC-----------------------------AGCAGCAGCA---------------------GCA---------------------------------------------TCAGCAGCAGCAGCAGCAGTA-----------------------------------------------------------------------------------------------------------GCAGCTGAACAATAAGAAGAGCGA-------------------------CAACAAGTAACTGAGGG----------C
droWil2 scf2_1100000008330:174-343 - C--AACA------------------------GC---AGCAACAATT---GCA------GCAACAGCAACAG--------CA---A-----------------------------------------------------CAGCAGCAACAATTGCAACAACAGCAGCAACAACTG-------------------------------------------------------CAGCAA---CAGCAACA---GCAA-C---A-------------------------------------------------------------------------------------------------GCAGCAACAAATGCAACTGCAACAACAACAGCAGCCACAATGGCAGCA---------------------------------------------------------------------------------A-----------CAGCAACAGCAGCTGCAGCT--CG------------------------------------------------------------AATACCG
dp5 Unknown_group_66:9750-9902 + AGCAGCA------------------------GC---AG---CAGCA---GCA---CCAACATCAGCAG-----------CCGCAG-----------------------------------------------------CAGCAGCAGCAGCAGCAGCAGCAGCACCAAC---AT-------------------------------------------------------CAGCAGCACCAGCAGCA---GCAG-C---AGCA---GC-----AGC-----------------------------AGCAGCAGCA---------------------GCA---------------------------------------GCAGCAGCAGCAGCAGCAGCAGCAGCA-----------------------------------------------------------------------------------------------------------GCAGCA--AG------------------------------AG----------------------------------A
droPer2 scaffold_6:4062712-4062911 - AGCCGCA------------------------GC---AT---TCACA---ACA---GCAGCAGCAGCAACAT--------CC---A-----------------------------------------------------CAGCATCAGCAGCAGCAGCAACACCCACAACATTCG-------------------------------------------------------CAGCAC---CAGCAGCA---GCAG-C---ATCA---GC-----ATC-----------------------------AGCAGCAGCA---------------------ACA---------------------------------------TCCACAACAGCAGCAGCAACATCCACA---------------------------------------------------------------------------------G-----------CAG---------C------A--ACAATTTGCGGCGCGACAGCAAA-----CGTACCAGG------------CACAGATACATACTCCACCG
droAna3 scaffold_13117:4227594-4227769 - AGCCTGA-----ATCACTTTAGTCCACCGCAGC---AG---CATCATCAGCA---ACAGCAGCAGCAACGCCACAACAGTCGCAG-----------CTT------------------------------------GTACAGCAACAGCAA---------------CAAC---CA-------------------------------------------------------CAGCAG-----------------------------------------------------------------------CAGCAACAACATCAGCAACAGCAACAGCATCA---------------------------------GCAGCAACAACAACGGCAACCACAACAGCCTCA---------------------------------------------------------------------------------A----------------------------------------------------------------------------------------CAGCTA-----TCC
droBip1 scf7180000392993:3480-3642 + C--AGCA------------------------AC---AG---GTACA---GCA---ACAGAAACAGCAACAG--------AT---A-----------------------------------------------------CAACAGCAACAGTAGAAGATACAACAGTAACAGGTA-------------------------------------------------------CAGCAA---CAGGAACA---GCAG-CAGAT--------ACACCATC-----------------------------AACAGATACA---------------------ACA---------------------------------------GCAACAGATACAACAGCAACAGGTAAA---------------------------------------------------------------------------------G-----------CAA---------C------A--AG---T-TTTTATT---------------------------------------------------TATT
droKik1 scf7180000302274:154916-155093 - C-CAGCA------------------------ACAACAG---CAGCA---GCA---A---CAACACCAACAG--------CA---C--------------------------------------------------TTGCAGCAGCAGCAG-------------------------------------CAGCA------TGCTCACCAGCAACATGTGGCT---GCTGTTATGCAG---CAGCAACA---GCAA-C---A------CC-----AGC---AA-----------------------CAGCAGCAGCA---------------------CTC---------------------------------------ACATCACGCCCAACAGCAGCATGCACA---------------------------------------------------------------------------------G-----------CAA---------CAG--------C-------------------------------------------------ATCATGGCCA-TTCATTG
droFic1 scf7180000453882:1180123-1180291 - C--AATA------------------------AC---AG---TAACA---GCA---CCACGAATAACAACCA--------CC---A-----------------------------------------------------CAGCAGCGGCGAACCGGAAACG-GAAACCG--------------------------------------------------CCGCCGTGGAA---------CTGCTGCA---GCAG-C---AGCA---GC----------------------------------------------A---------------------ACAGCAGCAGCAACAGCAACAACT------------------GCAACATTTGCAACTGCAGCCGGCGTC---------------------------------------------------------------------------------GAA---------------------------------------------------------------------------------TTTCGTGGCCATTCCATTG
droEle1 scf7180000491011:1857618-1857800 + AGCAGCA------------------------AC---AG---TCGCA---GCA---GTCGCAACAGCAG-----------TCGCAGCA-----G---------------------------------------------CAGCAGCAACAG---CG---ACG-------------CCA---------GCAGCAACAGA-------------------------------------------------------------A--------TCCC----------------------------GCC----------------------------------------------------------------A---------------AGCAACAGCAGCAACAGCAGCAGCAGCAGCAACAGCCACTGGGGGCCACCACGTTATCGGGA------------------------CGAGC----------------------------------------------------------------GGAGA---GCTACGAGAGTGA-------------TGCCAGCTGTTCCACTG
droRho1 scf7180000779985:259953-260114 - AACAGCA------------------------GC---AA---CAGCAACAGCA---G---CAGCAGCAGCAG--------CA---A-----------------------------------------------------CAGCAGCAGCAG---CA---A---------C---TG-------------------------------------------------------CAGCAG---CAGCAACA---GCAG-C---A------GC----------------------------------------------A---------------------ACA------TCAACAGCAGCAACA------------------GCAATATGTGCAACTACAGCAGCAGCA---------------------------------------------------------------------------------ACATTTGCTGGCCAG---------C------G--AT---T-CTGTAGC--------------------------------------------TGTTCCCATCG
droBia1 scf7180000298389:163959-164115 - ACCTGCATCCCAGCCACG------------GAC---AC---TCGCC---ATC---GCAGCAGCAGCAACAA--------CA---G-----------------------------------------------------CAACAGCA---GCAGCAGCAA-------------------------------C------------------------------------------------AACAGCA---GCAA-C---AGCAGCAGC----------------------------------------------A---------------------ACA---------------------------------------ACAGCAG---------------------------CA------ACAGGCGGCTGCA-CA-----------------------GCAGCAACTGCTGGT------------GAA---------GAG---------C---GGCT--CC--------------------------------------------------------ATCACCCATGG
droTak1 scf7180000416016:522733-522904 - ATCAAGA-----------------------TAC---AA---TGGCA---ATA---ACTGCAGCAGCAACAT--------CA---G-----------------------------------------------------CAGGGGAG----------------------------ACA---------GCAGCAAA------CGAGCTAAACAAGTATTGCT---GCTGTG---------CCGCAGCA---GCAG-C---AGCA---GC----------------------------------------------A---------------------ACA---------------------------------------TCAGCAG---------------------------A---------TAAA--------------------AGGCAGACAAAAGGCA---------C--GAGATGTGAGAGA-----------CGT--------------------------------------------------------------------CTAGGGTTGCTGTTTCGCCG
droEug1 scf7180000409095:151828-152006 + AGCAGCA------------------------AC---AC---TTGAA---GTA---CCAGCAATTGCAATAT--------CA---A--ATGCAGCAGCAATATGAATACCAGCAGCAGCAGCACTACCAACAGCAGTTC----------------------------------------------------------------------------------------------------CAGCAGCA---GCAA-C---AGCA---GC-----AGC-----------------------------AGCAGCAGCA---------------------GCA---------------------------------------AAAGCAGCAGCAGCAGCAACAGCAGCAACAGCAACA------------------------------------------------------------------------------------------------------------------------------------------------------------TCTGACACCTACGGCAACA
dm3 chr2L:20690169-20690368 - TGA--CA-----GC----------------AAC---AG---CGACA---GCA---ACAGCAACTGCGACAGCCGAGCAGCA-----------GCAGCTGCCAGCACCTCGGCCACATCCGCAACA-------------------------------------------------TCA---------GCAACGA------------------------------------CACTTG---CCGCAACA---GCAG-C---AGCA---AC-----AGCAGCAG------------------C-----AGCAGAAGCG---------------------GGA---------------------------------------------GGAGCAGCATCAGCAGCAGCA-----------------------------------------------------------------------------------------------------------GCAGCC--AAA--------------ATCA-----GCCAAGTGAGGCT-------------TACTAACCAAGCCACAA
droSim2 3r:24948319-24948474 + GCCCACC------------------------AC---CA---CAACAGCAGCA---G---TGGTAGCAG-----------CA---G-----------------------------------------------------CAGC--------------------------------GCATCAGCAGCACCA---------GGC----ACACCAGGC--------------------------GCAGCA---GCAG-C---A--------TCAG---------------------------T--CGCAGCAG------------------------------------------------------------------------------------CAGCAGCATCAGCGGC------------AGGATTATGCATCCCTTC--AGATG------------------------------------------------------------------------------------------GGCAGACAAG-----TGAGTGGACTAGTTA---------------------A
droSec2 scaffold_5:5646424-5646581 + AGCAGCA------------------------AC---AC---CAGCA---GTC---G---CAACAGCAGCAG--------CA---A-----------------------------------------------------CAGCAGCAGCAGTC----------------------GCA---------GCAGCAACTCCATGC-------CCTCGC--------------------------GCA------GCA-GCACAT--------GCTGCAAC-----------------------------TGCAGCCGCA---------------------ACA---------------------------------------TCACCAGCAGCAGCAGCA---------------------------CAA--------T-----------------------G--------------CCA-------------------------------------------------------------------CAAG-----TGAATGATACAGTCAGTAC---------------CTG
droYak3 2R:7035081-7035251 - GGCAGCA------------------------GC---AA---CAGCAACAGCA---ATAGGAACAG--------------CA---A-----------------------------------------------------CAGCAGCAGCGG---CA-------------------ACA---------GCAACC-------------------------------------------------------------------------AC-----AGC---AACAGCAGCAACATCAACATCATCGCAGCAGCAGCA---------------------ACA---------------------------------------TCACC----GCAACAGCAACAGCCTC-----------------------------GCGTTGC--GTGTG------------------------------------------------------------------------------------------TGCGTG-----CATGTGAGT------------TTGTGTTGGCAACTTCGTTG
droEre2 scaffold_4770:7389715-7389875 + AGCAACA------------------------CC---AG---CAGTC---GCAGCAGCAGCAGCAG--------------CA---A-----------------------------------------------------CAGCAGCAGCAG---CA---GTC-------------GCA---------GCAGCAACTCCATGC-------CCTCGC--------------------------GCA------GCA-GCACAT--------GCTGCAGC-----------------------------TGCAGCCGCA---------------------ACA---------------------------------------CCACCAGCAGCAGCAGCA---------------------------CAA--------T-----------------------G--------------CCA-------------------------------------------------------------------CAAG-----TGAATGATACAGTCAGTAC---------------CTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
AGCC--A-----GC----------------CAC---AG---TCACA---GCC---ATAGCAACAGCAACAG--------CA---G-----------------------------------------------------CAGCAGCAGCAGTCGAGGCAAT-GTACCAA--------------------------------------------------TTTCGATTGTC---------CAGCAGCA---GCAG-C---AGCA---GC-----AGC-----------------------------AGCAGCAGCA---------------------GCA---------------------------------------GCA------------------------------------------GGAGGCGGCATCA-----------------------GCCTCAAATGCACGCGA-------------------------------------------------------------------CAAGCGAGGT------------AAGTACTTGATAGCTATTCCATCGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..............................................................................................................................................................................................................................................CAGCAGCA---GCAG-C---AGCA---GC-----AGC-----------------------------............................................................................................................................................................................................................................................................................................22200.102200000
.......................................................ATAGCAACAGCAACAG--------CA---G-----------------------------------------------------CAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................23170.061100000
...........................................................CAACAGCAACAG--------CA---G-----------------------------------------------------CAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
............................................................AACAGCAACAG--------CA---G-----------------------------------------------------CAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051010000
...............................................................AGCAACAG--------CA---G-----------------------------------------------------CAGCAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051010000
..........................................................GCAACAGCAACAG--------CA---G-----------------------------------------------------CAGCAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051010000
.................................................................................................................................................................................................................................................................................GC-----------------------------AGCAGCAGCA---------------------GCA---------------------------------------GCA------------------------------------------GG....................................................................................................................................................................20200.051010000
.....................................................................AG--------CA---G-----------------------------------------------------CAGCAGCAGCAGTCGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051100000
.................................................................CAACAG--------CA---G-----------------------------------------------------CAGCAGCAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
droVir3
AGCAGCA------------------------GC---AG---CAACA---GCA---ACAACAACAGCAA-----------CA---A-----------------------------------------------------CAGCAACAACAG---CA-------------------GCA---------CCAACAG------------------------------------CACCAA---CAGCAGCA---GCAG-C---A--------GCAG---------------------------CA--ACAGCAGCGGGA---------------------ACA---------------------------------------GCAGCGCGAGCAGCAGCAGCAGGCACA---------------------------------------------------------------------------------G-----------CAG---------CAG--------G---C-TCAGAGC-----------------------TA-------------TGACAAATATTCGGCGGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................................................................................................ACAG------------------------------------CACCAA---CAGCAGCA---GCA................................................................................................................................................................................................................................................................................................................................................2142.7511004000000000000100100000202010000000000000000000000000000000000
............................................................................................................................................................................................AACAG------------------------------------CACCAA---CAGCAGCA---GCA................................................................................................................................................................................................................................................................................................................................................2231.334000000000000000000000000010100000011000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................CGGGA---------------------ACA---------------------------------------GCAGCGCGAGCA.......................................................................................................................................................................................................2011.001000000000000010000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................CGGGA---------------------ACA---------------------------------------GCAGCGCGAGCAGC.....................................................................................................................................................................................................2211.001000000000000010000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................GCGGGA---------------------ACA---------------------------------------GCAGCGCGAGC........................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................AG-C---A--------GCAG---------------------------CA--ACAGCAGCGGGA---------------------ACA---------------------------------------...................................................................................................................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................GA---------------------ACA---------------------------------------GCAGCGCGAGCAGCAGC..................................................................................................................................................................................................2211.001000000000000000000000000000000000000100000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................CGCGAGCAGCAGCAGCAGGC...........................................................................................................................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-TCAGAGC-----------------------TA-------------TGACAAATATTCGGC..2511.001000000000000010000000000000000000000000000000000000000000000000
..........................................................................................................................................CAGCAACAACAG---CA-------------------GCA---------CC................................................................................................................................................................................................................................................................................................................................................................................................................1930.331001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................AACAG------------------------------------CACCAA---CAGCAGCA---GC.................................................................................................................................................................................................................................................................................................................................................2130.331000000000000000000000000100000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................A--ACAGCAGCGGGA---------------------ACA---------------------------------------GC.................................................................................................................................................................................................................1830.331000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................GCAGGCACA---------------------------------------------------------------------------------G-----------CAG---------CAG--------G---C-..............................................................1840.251000100000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................ACAG------------------------------------CACCAA---CAGCAGCA---GC.................................................................................................................................................................................................................................................................................................................................................2040.251000000000000000000010000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGGCACA---------------------------------------------------------------------------------G-----------CAG---------CAG--------G---C-..............................................................2040.251001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................CAACAG------------------------------------CACCAA---CAGCAGCA---...................................................................................................................................................................................................................................................................................................................................................2060.171000000000000010000000000000000000000000000000000000000000000000
.................................................GCA---ACAACAACAGCAA-----------CA---A-----------------------------------------------------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.153003000000000000000000000000000000000000000000000000000000000000
..........................................AACA---GCA---ACAACAACAGCAA-----------C............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102001000000000000000000000100000000000000000000000000000000000000
...............................................................................................................................................................................................AG------------------------------------CACCAA---CAGCAGCA---GCAG-..............................................................................................................................................................................................................................................................................................................................................20120.081000000000000000000000000000001000000000000000000000000000000000
...............................GC---AG---CAACA---GCA---ACAACAACAGCAA-----------CA---A-----------------------------------------------------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................28120.081000000000000000100000000000000000000000000000000000000000000000
.............................................................................................................................................................................................ACAG------------------------------------CACCAA---CAGCAGCA---GCAT-..............................................................................................................................................................................................................................................................................................................................................22140.071000000000000000000000000000000100000000000000000000000000000000
..............................................................................................................................................................................................CAG------------------------------------CACCAA---CAGCAGCA---GCA................................................................................................................................................................................................................................................................................................................................................20170.061001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................G------------------------------------CACCAA---CAGCAGCA---GCAG-C---..........................................................................................................................................................................................................................................................................................................................................20190.051001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................CACCAA---CAGCAGCA---GCAG-C---A--------GCA..............................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000000000000000000000000000000000001000
..................................................CA---ACAACAACAGCAA-----------CA---A-----------------------------------------------------CA................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000010000000000000000000000000000000000000000
....................................AG---CAACA---GCA---ACAACAACAGCAA-----------CA---........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000001000000000000000000000000000000000000000000000000
.............................................A---GCA---ACAACAACAGCAA-----------CA---A-----------------------------------------------------CAGCAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000100000000000000000000000000000000000000000000
AGCAGCA------------------------GC---AG---CAACA---GCA---AC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000010000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................CCAA---CAGCAGCA---GCAG-C---A--------.................................................................................................................................................................................................................................................................................................................................18200.051001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................A---CAGCAGCA---GCAG-C---A--------GCAG---------------------------CA--ACAG..........................................................................................................................................................................................................................................................................................25200.051001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................CAGCA---GCAG-C---A--------GCAG---------------------------CA--ACAGCA........................................................................................................................................................................................................................................................................................23200.051000000000000000000000000001000000000000000000000000000000000000
....................................................................................................................................................................................................................................................CA---GCAG-C---A--------GCAG---------------------------CA--ACAGC.........................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................................................CACCAA---CAGCAGCA---GCAG-C---..........................................................................................................................................................................................................................................................................................................................................19200.051000000000000010000000000000000000000000000000000000000000000000
...........................................................CAACAGCAA-----------CA---A-----------------------------------------------------CAGCAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
..........................................AACA---GCA---ACAACAACAGCAA-----------CA---........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000000010000000000000000000000000000000
.........................................................................................................................................................................................................................................AA---CAGCAGCA---GCAG-C---A--------GCA..............................................................................................................................................................................................................................................................................................................................19200.051000000000000000010000000000000000000000000000000000000000000000
.........................................................AACAACAGCAA-----------CA---A-----------------------------------------------------CAGCAACAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................CAA---CAGCAGCA---GCAG-C---A--------GCAG---------------------------CA--ACA...........................................................................................................................................................................................................................................................................................26200.051001000000000000000000000000000000000000000000000000000000000000
..............................................................CAGCAA-----------CA---A-----------------------------------------------------CAGCAACAACAG---CA-------------------GC............................................................................................................................................................................................................................................................................................................................................................................................................................25200.051001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................CAGCAGCA---GCAG-C---A--------GCAG---------------------------CA--A.............................................................................................................................................................................................................................................................................................21200.051000010000000000000000000000000000000000000000000000000000000000
..............................................................CAGCAA-----------CA---A-----------------------------------------------------CAGCAACAACAG---CA-------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000100000000000000000000000000000000000000
...............................................................AGCAA-----------CA---A-----------------------------------------------------CAGCAACAACAG---CA-------------------GC............................................................................................................................................................................................................................................................................................................................................................................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
...................................................................A-----------CA---A-----------------------------------------------------CAGCAACAACAG---CA-------------------GC............................................................................................................................................................................................................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................CAG------------------------------------CACCAA---CAGCAGCA---GCAG-C---A--------T................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000000000000000000000000000000000000001
........................................................................................................................................................................................................................................CAA---CAGCAGCA---GCAG-C---A--------GCAG---------------------------CA--ACAGC.........................................................................................................................................................................................................................................................................................28200.051001000000000000000000000000000000000000000000000000000000000000
.................................................................CAA-----------CA---A-----------------------------------------------------CAGCAACAACAG---CA-------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000000001000000000000000000000000000000
................................C---AG---CAACA---GCA---ACAACAACAGCAA-----------CA---A-----------------------------------------------------C.................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051010000000000000000000000000000000000000000000000000000000000000
AGCAGCA------------------------GC---AG---CAACA---GCA---ACAACAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051001000000000000000000000000000000000000000000000000000000000000
..CAGCA------------------------GC---AG---CAACA---GCA---ACAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................A---CAGCAGCA---GCAG-C---A--------GCAG---------------------------CA--AC............................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000000010000000000000000000000000000000
AGCAGCA------------------------GC---AG---CAACA---GCA---.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000010000000000000000000000000000000000
.........................................................................................................................................................................................................................................................GCAG-C---A--------GCAG---------------------------CA--ACAGCAGCG.....................................................................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................AGCA---GCAG-C---A--------GCAG---------------------------CA--AC............................................................................................................................................................................................................................................................................................18200.051001000000000000000000000000000000000000000000000000000000000000
droGri2
AGCAGTA------------------------TC---AG---CAGCA---GCA---GCAGCAGCAGCAG-----------CA---G-----------------------------------------------------CAGCAGCAGCAGCAGCAGCAGCAGCA----------GCA---------GCAGCAG------------------------------------CATCAA---CAGCATCAGCAGCA-GCAGCA--------GCAGCAGC-----------------------------AGCAGCAGCA---------------------GCA---------------------------------------------TCAGCAGCAGCAGCAGCAGTA-----------------------------------------------------------------------------------------------------------GCAGCTGAACAATAAGAAGAGCGA-------------------------CAACAAGTAACTGAGGG----------CSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
................................................................................................................................................CAGCAGCAGCAGCAGCAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................19200.25550
.............................................................................................................................................CAGCAGCAGCAGCAGCAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................19200.25550
..........................................................................................................................................................................................................................................A---CAGCATCAGCAGCA-GCA............................................................................................................................................................................................................................................................................................................................................18200.05110
..............................................................................................................................................................................GCA---------GCAGCAG------------------------------------CATCAA---CAGCA.........................................................................................................................................................................................................................................................................................................................................................21200.05110
droWil2
C--AACA------------------------GC---AGCAACAATT---GCA------GCAACAGCAACAG--------CA---A-----------------------------------------------------CAGCAGCAACAATTGCAACAACAGCAGCAACAACTG-------------------------------------------------------CAGCAA---CAGCAACA---GCAA-C---A-------------------------------------------------------------------------------------------------GCAGCAACAAATGCAACTGCAACAACAACAGCAGCCACAATGGCAGCA---------------------------------------------------------------------------------A-----------CAGCAACAGCAGCTGCAGCT--CG------------------------------------------------------------AATACCGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................................................................................................................................................................................................................................................AACA---GCAA-C---A-------------------------------------------------------------------------------------------------GCAGCAACA...............................................................................................................................................................................................................................19200.15300030
.........................................................................................................................................................................................................................................................................................................................................................................AACAAATGCAACTGCAACAACAAC...........................................................................................................................................................................................................24200.15303000
..................................................................AACAG--------CA---A-----------------------------------------------------CAGCAGCAACA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.15300030
.......................................................................................................................................................................................................................................................................................................................................................................................................CACAATGGCAGCA---------------------------------------------------------------------------------A-----------CAGCAACAGCAGT..............................................................................2790.11100010
................................................................................................................................................CAACAATTGCAACAACAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................19100.10100010
...............................................................................................................................................................................................................................................................................................................................................................................TGCAACTGCAACAACAACAGC........................................................................................................................................................................................................21200.10202000
.......................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAGCAGCCACAATG..............................................................................................................................................................................................23140.07101000
.....................................................................................................................................................................................................................................................A---GCAA-C---A-------------------------------------------------------------------------------------------------GCAGCAACAAATGCAACTGC....................................................................................................................................................................................................................27150.07101000
...............................................................AGCAACAG--------CA---A-----------------------------------------------------CAGCAGCAACAATT....................................................................................................................................................................................................................................................................................................................................................................................................................................................25160.06100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCTGCAGCT--CG------------------------------------------------------------AATACCG26170.06101000
.........................................................................................................................................................................................................................................................................................................................................................................AACAAATGCAACTGCAACAACAA............................................................................................................................................................................................................23200.05101000
...............................................................................................................................................................................................................................................................................................................................................................................TGCAACTGCAACAACAACAGCAGC.....................................................................................................................................................................................................24200.05101000
.........................................................................................................................................................................................................................................................................................................................................................................AACAAATGCAACTGCAACAACAACAGC........................................................................................................................................................................................................27200.05101000
.........................................................................................................................................................................................................................................................................................................................................................................AACAAATGCAACTGCAACAACAACAGCA.......................................................................................................................................................................................................28200.05101000
...........................................................CAACAGCAACAG--------CA---A-----------------------------------------------------CAGCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
.....................................................................AG--------CA---A-----------------------------------------------------CAGCAGCAACAATTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101000
............................................................AACAGCAACAG--------CA---A-----------------------------------------------------CAGCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100001
.........................................................................................................................................................................................................................................................................................................................................................................AACAAATGCAACTGCAACAACAACA..........................................................................................................................................................................................................25200.05101000
........................................................................................................................................................................................................................................CAA---CAGCAACA---GCAA-C---A-------------------------------------------------------------------------------------------------GCAG....................................................................................................................................................................................................................................21200.05101000
dp5
AGCAGCA------------------------GC---AG---CAGCA---GCA---CCAACATCAGCAG-----------CCGCAG-----------------------------------------------------CAGCAGCAGCAGCAGCAGCAGCAGCACCAAC---AT-------------------------------------------------------CAGCAGCACCAGCAGCA---GCAG-C---AGCA---GC-----AGC-----------------------------AGCAGCAGCA---------------------GCA---------------------------------------GCAGCAGCAGCAGCAGCAGCAGCAGCA-----------------------------------------------------------------------------------------------------------GCAGCA--AG------------------------------AG----------------------------------ASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................................................................................................................................T-------------------------------------------------------CAGCAGCACCAGCAGCA---GCAG-..............................................................................................................................................................................................................................................................................................................................................22101.30130600000700
....................................................................................................................................................................CCAAC---AT-------------------------------------------------------CAGCAGCACCAGCAGC.......................................................................................................................................................................................................................................................................................................................................................2320.5010100000000
...................................................................................................................................................................ACCAAC---AT-------------------------------------------------------CAGCAGCACCAGCA.........................................................................................................................................................................................................................................................................................................................................................2220.5010100000000
...................................................................................................................................................................ACCAAC---AT-------------------------------------------------------CAGCAGCACCAGCAGCA---...................................................................................................................................................................................................................................................................................................................................................2520.5010100000000
.............................................................................................................................................................................T-------------------------------------------------------CAGCAGCACCAGCAGCA---GCAG-C---..........................................................................................................................................................................................................................................................................................................................................23100.3030300000000
...................................................A---CCAACATCAGCAG-----------CCGCAG-----------------------------------------------------C.................................................................................................................................................................................................................................................................................................................................................................................................................................................................21150.2740101200000
...................................................A---CCAACATCAGCAG-----------CCGCAG-----------------------------------------------------CAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................23150.2740400000000
.............................................................................................................................................................................T-------------------------------------------------------CAGCAGCACCAGCAGCA---GCAG-C---AG........................................................................................................................................................................................................................................................................................................................................2590.2220100000100
.............................................................................................................................................................................T-------------------------------------------------------CAGCAGCACCAGCAGCA---GCAG-C---A.........................................................................................................................................................................................................................................................................................................................................24100.2020100100000
...................................................A---CCAACATCAGCAG-----------CCGCAG-----------------------------------------------------CAGCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................26110.1820200000000
.........................................................AACATCAGCAG-----------CCGCAG-----------------------------------------------------CAGCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................23110.1820200000000
.............................................................................................................................................................................T-------------------------------------------------------CAGCAGCACCAGCAGCA---GCA................................................................................................................................................................................................................................................................................................................................................21120.1720200000000
...................................................A---CCAACATCAGCAG-----------CCGCAG-----------------------------------------------------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................20150.1320200000000
........................................................................................................................................................................C---AT-------------------------------------------------------CAGCAGCACCAGCAGCA---GC.................................................................................................................................................................................................................................................................................................................................................2280.1310100000000
............................................................................................................................................................................AT-------------------------------------------------------CAGCAGCACCAGCAGCA---GCAG-C---..........................................................................................................................................................................................................................................................................................................................................2480.1310100000000
...........................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAGCAGCAGC............................................................................................................................................................................................21200.1020200000000
..............................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAGCAGCAGC.........................................................................................................................................................................................21200.1020200000000
....................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAGCA-----------------------------------------------------------------------------------------------------------GCAGC........................................................................21200.1020200000000
..............................................................................................................................................................................................................................................................C---AGCA---GC-----AGC-----------------------------AGCAGCAG....................................................................................................................................................................................................................................................................................18200.1020200000000
.................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAGCAGCA-----------------------------------------------------------------------------------------------------------GC...........................................................................21200.1020200000000
....................................................................................................................................................................................................................................................CA---GCAG-C---AGCA---GC-----AGC-----------------------------AGCAG.......................................................................................................................................................................................................................................................................................21200.1020200000000
.........................................................................................................................................................................................................................................................................................................................A---------------------GCA---------------------------------------GCAGCAGCAGCAGCAGC..................................................................................................................................................................................................21200.1020200000000
.................................................................................................................................................................................................................................................................................................................................................A---------------------------------------GCAGCAGCAGCAGCAGCAGC...............................................................................................................................................................................................21200.1020200000000
...................................................A---CCAACATCAGCAG-----------CCGCAG-----------------------------------------------------CAGCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................27110.0910100000000
.........................................................AACATCAGCAG-----------CCGCAG-----------------------------------------------------CAGCAGCAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................27110.0910100000000
.........................................................AACATCAGCAG-----------CCGCAG-----------------------------------------------------CAGCAGCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................26110.0910100000000
...................................................A---CCAACATCAGCAG-----------CCGCAG-----------------------------------------------------CAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................25130.0810100000000
.........................................................AACATCAGCAG-----------CCGCAG-----------------------------------------------------CAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................22130.0810100000000
.......................................................CCAACATCAGCAG-----------CCGCAG-----------------------------------------------------CAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................24130.0810100000000
.............................................................................................................................................................................T-------------------------------------------------------CAGCAGCACCAGCAGCA---G..................................................................................................................................................................................................................................................................................................................................................19140.0710100000000
........................................................CAACATCAGCAG-----------CCGCAG-----------------------------------------------------CAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................21150.0710000000100
.........................................................AACATCAGCAG-----------CCGCAG-----------------------------------------------------CAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................20150.0710100000000
............................................................ATCAGCAG-----------CCGCAG-----------------------------------------------------CAGCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................20150.0710100000000
.......................................................CCAACATCAGCAG-----------CCGCAG-----------------------------------------------------CA................................................................................................................................................................................................................................................................................................................................................................................................................................................................21150.0710100000000
..................................................CA---CCAACATCAGCAG-----------CCGCAG-----------------------------------------------------CAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................24150.0710100000000
..................................................CA---CCAACATCAGCAG-----------CCGCAG-----------------------------------------------------CA................................................................................................................................................................................................................................................................................................................................................................................................................................................................23150.0710100000000
..................................................CA---CCAACATCAGCAG-----------CCGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20150.0710100000000
...................................................A---CCAACATCAGCAG-----------CCGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19150.0710100000000
.......................................................CCAACATCAGCAG-----------CCGCAG-----------------------------------------------------CAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................23150.0710010000000
...................................................A---CCAACATCAGCAG-----------CCGCAG-----------------------------------------------------CA................................................................................................................................................................................................................................................................................................................................................................................................................................................................22150.0710100000000
.......................................................CCAACATCAGCAG-----------CCGCAG-----------------------------------------------------CAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................22150.0710100000000
........................................................................................................................................................................C---AT-------------------------------------------------------CAGCAGCACCAGCAGC.......................................................................................................................................................................................................................................................................................................................................................19160.0610100000000
............................................................................................................................................................................AT-------------------------------------------------------CAGCAGCACCAGCAGCA---...................................................................................................................................................................................................................................................................................................................................................19170.0610100000000
........................................................CAACATCAGCAG-----------CCGCAG-----------------------------------------------------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................18170.0610100000000
......................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAGCA-----------------------------------------------------------------------------------------------------------GCAGCA--AG------------------------------AG----------------------------------A25180.0610100000000
.........................................................................................................................................................CAGCAGCAGCACCAAC---AT-------------------------------------------------------CAGCAG.................................................................................................................................................................................................................................................................................................................................................................24200.0510100000000
.....................................................................................................................................................GCAGCAGCAGCAGCACCAAC---AT-------------------------------------------------------C......................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
.....................................................................................................................................................................................................................................................................................................................CAGCA---------------------GCA---------------------------------------GCAGCAGCAGCAGCAGCAG................................................................................................................................................................................................27200.0510100000000
...........................................................................................................................................................................................................................................................AG-C---AGCA---GC-----AGC-----------------------------AGCAGCAGC...................................................................................................................................................................................................................................................................................21200.0510010000000
..........................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAGCAGCAGCAGCAGCA-----------------------------------------------------------------------------------------------------------G............................................................................27200.0510100000000
....GCA------------------------GC---AG---CAGCA---GCA---CCAACATC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
.....................................................................................................................................................................................................................................CAGCAGCACCAGCAGCA---GCAG-C---A.........................................................................................................................................................................................................................................................................................................................................23200.0510100000000
...........................................................................................................................................AGCAGCAGCAGCAGCAGCAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCA-----------------------------------------------------------------------------------------------------------GCAGCA--AG------------------------------A....................................19200.0510100000000
...................................................................................................................................................................................................................................................GCA---GCAG-C---AGCA---GC-----AGC-----------------------------AGCAGCA.....................................................................................................................................................................................................................................................................................24200.0510100000000
....................................................................................................................................................................................................................................................CA---GCAG-C---AGCA---GC-----AGC-----------------------------AGCAGCAGCA---------------------.............................................................................................................................................................................................................................................................26200.0510000100000
..................................................................................................................................................................................................................................................................................................................CAGCAGCA---------------------GCA---------------------------------------GCAGCAGCAGCAGCAG...................................................................................................................................................................................................27200.0510100000000
..................................................................................................................................................................................................................................................................................C-----------------------------AGCAGCAGCA---------------------GCA---------------------------------------GCAGCAGCAGCAG......................................................................................................................................................................................................27200.0510100000000
.............................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAGCAGCAGCAGCA-----------------------------------------------------------------------------------------------------------GCAG.........................................................................27200.0510100000000
................................C---AG---CAGCA---GCA---CCAACATCAGCAG-----------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510100000000
..................................................................................................................................................GCAGCAGCAGCAGCAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510100000000
..............................................................CAGCAG-----------CCGCAG-----------------------------------------------------CAGCAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
........................................................................................................................................................................................................................................................................................................................CA---------------------GCA---------------------------------------GCAGCAGCAGCAGCAGCAGCAG.............................................................................................................................................................................................27200.0510100000000
................................................................................................................................................................................................................................................................................................................................................CA---------------------------------------GCAGCAGCAGCAGCAGCAGCAGCAG..........................................................................................................................................................................................27200.0510100000000
droPer2
AGCCGCA------------------------GC---AT---TCACA---ACA---GCAGCAGCAGCAACAT--------CC---A-----------------------------------------------------CAGCATCAGCAGCAGCAGCAACACCCACAACATTCG-------------------------------------------------------CAGCAC---CAGCAGCA---GCAG-C---ATCA---GC-----ATC-----------------------------AGCAGCAGCA---------------------ACA---------------------------------------TCCACAACAGCAGCAGCAACATCCACA---------------------------------------------------------------------------------G-----------CAG---------C------A--ACAATTTGCGGCGCGACAGCAAA-----CGTACCAGG------------CACAGATACATACTCCACCGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
AGCCTGA-----ATCACTTTAGTCCACCGCAGC---AG---CATCATCAGCA---ACAGCAGCAGCAACGCCACAACAGTCGCAG-----------CTT------------------------------------GTACAGCAACAGCAA---------------CAAC---CA-------------------------------------------------------CAGCAG-----------------------------------------------------------------------CAGCAACAACATCAGCAACAGCAACAGCATCA---------------------------------GCAGCAACAACAACGGCAACCACAACAGCCTCA---------------------------------------------------------------------------------A----------------------------------------------------------------------------------------CAGCTA-----TCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................ATCATCAGCA---ACAGCAGCAGCAACGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.002000002
............................................CATCAGCA---ACAGCAGCAGCAACGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
................................................................................................................................................................................................................................................................................................................................................CA---------------------------------GCAGCAACAACAACGGCAAC.....................................................................................................................................................................................................2211.001010000
.......................................................................................................................................................................................................................................................................................................................................CAACAGCATCA---------------------------------GCAGCAACA................................................................................................................................................................................................................2070.292000020
.....................................................................................................................................................................................................................................................................................................................................AGCAACAGCATCA---------------------------------GCAGCAACA................................................................................................................................................................................................................2260.171010000
.......................................................................................................................................................................................................................................GCAG-----------------------------------------------------------------------CAGCAACAACATCAGC..........................................................................................................................................................................................................................................................................2060.171010000
.......................................................................................................................................................................................................................................................................................................................ACAACATCAGCAACAGCAAC.................................................................................................................................................................................................................................................................2060.171010000
............................................CATCAGCA---ACAGCAGCAGCAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2170.141001000
droBip1
C--AGCA------------------------AC---AG---GTACA---GCA---ACAGAAACAGCAACAG--------AT---A-----------------------------------------------------CAACAGCAACAGTAGAAGATACAACAGTAACAGGTA-------------------------------------------------------CAGCAA---CAGGAACA---GCAG-CAGAT--------ACACCATC-----------------------------AACAGATACA---------------------ACA---------------------------------------GCAACAGATACAACAGCAACAGGTAAA---------------------------------------------------------------------------------G-----------CAA---------C------A--AG---T-TTTTATT---------------------------------------------------TATTSizeHit CountTotal NormTotal
No Reads
droKik1
C-CAGCA------------------------ACAACAG---CAGCA---GCA---A---CAACACCAACAG--------CA---C--------------------------------------------------TTGCAGCAGCAGCAG-------------------------------------CAGCA------TGCTCACCAGCAACATGTGGCT---GCTGTTATGCAG---CAGCAACA---GCAA-C---A------CC-----AGC---AA-----------------------CAGCAGCAGCA---------------------CTC---------------------------------------ACATCACGCCCAACAGCAGCATGCACA---------------------------------------------------------------------------------G-----------CAA---------CAG--------C-------------------------------------------------ATCATGGCCA-TTCATTGSizeHit CountTotal NormTotal
No Reads
droFic1
C--AATA------------------------AC---AG---TAACA---GCA---CCACGAATAACAACCA--------CC---A-----------------------------------------------------CAGCAGCGGCGAACCGGAAACG-GAAACCG--------------------------------------------------CCGCCGTGGAA---------CTGCTGCA---GCAG-C---AGCA---GC----------------------------------------------A---------------------ACAGCAGCAGCAACAGCAACAACT------------------GCAACATTTGCAACTGCAGCCGGCGTC---------------------------------------------------------------------------------GAA---------------------------------------------------------------------------------TTTCGTGGCCATTCCATTGSizeHit CountTotal NormTotal
No Reads
droEle1
AGCAGCA------------------------AC---AG---TCGCA---GCA---GTCGCAACAGCAG-----------TCGCAGCA-----G---------------------------------------------CAGCAGCAACAG---CG---ACG-------------CCA---------GCAGCAACAGA-------------------------------------------------------------A--------TCCC----------------------------GCC----------------------------------------------------------------A---------------AGCAACAGCAGCAACAGCAGCAGCAGCAGCAACAGCCACTGGGGGCCACCACGTTATCGGGA------------------------CGAGC----------------------------------------------------------------GGAGA---GCTACGAGAGTGA-------------TGCCAGCTGTTCCACTGSizeHit CountTotal NormTotal
No Reads
droRho1
AACAGCA------------------------GC---AA---CAGCAACAGCA---G---CAGCAGCAGCAG--------CA---A-----------------------------------------------------CAGCAGCAGCAG---CA---A---------C---TG-------------------------------------------------------CAGCAG---CAGCAACA---GCAG-C---A------GC----------------------------------------------A---------------------ACA------TCAACAGCAGCAACA------------------GCAATATGTGCAACTACAGCAGCAGCA---------------------------------------------------------------------------------ACATTTGCTGGCCAG---------C------G--AT---T-CTGTAGC--------------------------------------------TGTTCCCATCGSizeHit CountTotal NormTotal
No Reads
droBia1
ACCTGCATCCCAGCCACG------------GAC---AC---TCGCC---ATC---GCAGCAGCAGCAACAA--------CA---G-----------------------------------------------------CAACAGCA---GCAGCAGCAA-------------------------------C------------------------------------------------AACAGCA---GCAA-C---AGCAGCAGC----------------------------------------------A---------------------ACA---------------------------------------ACAGCAG---------------------------CA------ACAGGCGGCTGCA-CA-----------------------GCAGCAACTGCTGGT------------GAA---------GAG---------C---GGCT--CC--------------------------------------------------------ATCACCCATGGSizeHit CountTotal NormTotal
No Reads
droTak1
ATCAAGA-----------------------TAC---AA---TGGCA---ATA---ACTGCAGCAGCAACAT--------CA---G-----------------------------------------------------CAGGGGAG----------------------------ACA---------GCAGCAAA------CGAGCTAAACAAGTATTGCT---GCTGTG---------CCGCAGCA---GCAG-C---AGCA---GC----------------------------------------------A---------------------ACA---------------------------------------TCAGCAG---------------------------A---------TAAA--------------------AGGCAGACAAAAGGCA---------C--GAGATGTGAGAGA-----------CGT--------------------------------------------------------------------CTAGGGTTGCTGTTTCGCCGSizeHit CountTotal NormTotal
No Reads
droEug1
AGCAGCA------------------------AC---AC---TTGAA---GTA---CCAGCAATTGCAATAT--------CA---A--ATGCAGCAGCAATATGAATACCAGCAGCAGCAGCACTACCAACAGCAGTTC----------------------------------------------------------------------------------------------------CAGCAGCA---GCAA-C---AGCA---GC-----AGC-----------------------------AGCAGCAGCA---------------------GCA---------------------------------------AAAGCAGCAGCAGCAGCAACAGCAGCAACAGCAACA------------------------------------------------------------------------------------------------------------------------------------------------------------TCTGACACCTACGGCAACASizeHit CountTotal NormTotal
No Reads
dm3
TGA--CA-----GC----------------AAC---AG---CGACA---GCA---ACAGCAACTGCGACAGCCGAGCAGCA-----------GCAGCTGCCAGCACCTCGGCCACATCCGCAACA-------------------------------------------------TCA---------GCAACGA------------------------------------CACTTG---CCGCAACA---GCAG-C---AGCA---AC-----AGCAGCAG------------------C-----AGCAGAAGCG---------------------GGA---------------------------------------------GGAGCAGCATCAGCAGCAGCA-----------------------------------------------------------------------------------------------------------GCAGCC--AAA--------------ATCA-----GCCAAGTGAGGCT-------------TACTAACCAAGCCACAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............................................................................................................................................................................................................................................................C---AGCA---AC-----AGCAGCAG------------------C-----AGCAGA......................................................................................................................................................................................................................................................................................221949.00931000000000000000000000000000190000000021001000001001012000000000000000000000000227000001000000000000000000600000000010000010012000120000000000001022310211040000000003000100100040002110004100002100000000000000000000051043002010100000101000000003781022400491840641223235321212321042121442732410248382400503172544343381365724395549181192120108614812154500
..................................................................................................................................................................................................................................................................AGCA---AC-----AGCAGCAG------------------C-----AGCAGA......................................................................................................................................................................................................................................................................................21201.55310000000000000000000000000001000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000001000000000000010100000000000002001001000000010100000003000000010220000030100000000020220
..............................................................................................................................................................................................................................................................C---AGCA---AC-----AGCAGCAG------------------C-----AGCAGAA.....................................................................................................................................................................................................................................................................................23111.27140000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000010003000000000000000000000000000000300000000000100000000200
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAGTGAGGCT-------------TACTAAC..........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................CATCCGCAACA-------------------------------------------------TCA---------GCAACGA------------------------------------.......................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................CAGAAGCG---------------------GGA---------------------------------------------GGAGCAG......................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................A---------------------------------------------GGAGCAGCATCAGCAGCAGC.........................................................................................................................................................................................2130.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................AGCA---AC-----AGCAGCAG------------------C-----AGCAGAA.....................................................................................................................................................................................................................................................................................22130.5470000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000110000000000000000000000000000000000000000000000010020
................................................................................................................................................................................................................................................................................................................................................GA---------------------------------------------GGAGCAGCATCAGCAGCA...........................................................................................................................................................................................2040.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................C-----AGCAGCAG------------------C-----AGCAGAAGCG---------------------G............................................................................................................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................A---------------------------------------------GGAGCAGCATCAGCAGC............................................................................................................................................................................................1860.3320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................AGCA---AC-----AGCAGCAG------------------C-----AGCAGAAGC...................................................................................................................................................................................................................................................................................2460.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................CAGCATCAGCAGCAGCA-----------------------------------------------------------------------------------------------------------GCAG.........................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000001010
.........................................................................................................................................................................................................................................................GCAG-C---AGCA---AC-----AGCAGCAG------------------C-----AGCAGA......................................................................................................................................................................................................................................................................................2670.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................CA---AC-----AGCAGCAG------------------C-----AGCAGAAGC...................................................................................................................................................................................................................................................................................2270.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
....................................AG---CGACA---GCA---ACAGCAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1870.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................CA---AC-----AGCAGCAG------------------C-----AGCAGAA.....................................................................................................................................................................................................................................................................................20150.1320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000010000
....................................................................................................................................................................................................................................................................CA---AC-----AGCAGCAG------------------C-----AGCAGAAG....................................................................................................................................................................................................................................................................................2190.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................................................................................................CAG-C---AGCA---AC-----AGCAGCAG------------------C-----AGCAGA......................................................................................................................................................................................................................................................................................2590.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................GCAGCATCAGCAGCAGCA-----------------------------------------------------------------------------------------------------------GC...........................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................................GCA---AC-----AGCAGCAG------------------C-----AGCAGAA.....................................................................................................................................................................................................................................................................................21140.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................G-C---AGCA---AC-----AGCAGCAG------------------C-----AGCAGA......................................................................................................................................................................................................................................................................................23160.0610000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................A---AC-----AGCAGCAG------------------C-----AGCAGA......................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................CA---GCAG-C---AGCA---AC-----AGCAG.......................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................GCA---AC-----AGCAGCAG------------------C-----AGCA........................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................AACA---GCAG-C---AGCA---AC-----AGCA........................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................GCAGCATCAGCAGCAGCA-----------------------------------------------------------------------------------------------------------GCA..........................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................................AGCA---AC-----AGCAGCAG------------------C-----AGCA........................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................C---AGCA---AC-----AGCAGCAG------------------C-----AGCAG.......................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................CGCAACA---GCAG-C---AGCA---AC-----............................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................G-C---AGCA---AC-----AGCAGCAG------------------C-----A...........................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................CAACA---GCAG-C---AGCA---AC-----AGC.........................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................GCA---AC-----AGCAGCAG------------------C-----AGCAGA......................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................CAGCATCAGCAGCAGCA-----------------------------------------------------------------------------------------------------------GCAGA........................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
...................................................................................................................................................................................................................................................ACA---GCAG-C---AGCA---AC-----AGCAGCAG------------------C-----AGCA........................................................................................................................................................................................................................................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................CATCAGCAGCAGCA-----------------------------------------------------------------------------------------------------------GCAGCC--T....................................................................21200.0510000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................CAG-C---AGCA---AC-----AGCAGCAG------------------C-----AGCA........................................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................C---AGCA---AC-----AGCAGCAG------------------C-----AGCAGAAT....................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................AACA---GCAG-C---AGCA---AC-----AGCAGCAG------------------C-----AGC.........................................................................................................................................................................................................................................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................CAGCATCAGCAGCAGCA-----------------------------------------------------------------------------------------------------------GCAGC........................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCA-----------------------------------------------------------------------------------------------------------GCAGCC--A....................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................G-C---AGCA---AC-----AGCAGCAG------------------C-----AGC.........................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GCCCACC------------------------AC---CA---CAACAGCAGCA---G---TGGTAGCAG-----------CA---G-----------------------------------------------------CAGC--------------------------------GCATCAGCAGCACCA---------GGC----ACACCAGGC--------------------------GCAGCA---GCAG-C---A--------TCAG---------------------------T--CGCAGCAG------------------------------------------------------------------------------------CAGCAGCATCAGCGGC------------AGGATTATGCATCCCTTC--AGATG------------------------------------------------------------------------------------------GGCAGACAAG-----TGAGTGGACTAGTTA---------------------ASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................................C--------------------------GCAGCA---GCAG-C---A--------TCA..............................................................................................................................................................................................................................................................................................................................16200.05100000000001000000
droSec2
AGCAGCA------------------------AC---AC---CAGCA---GTC---G---CAACAGCAGCAG--------CA---A-----------------------------------------------------CAGCAGCAGCAGTC----------------------GCA---------GCAGCAACTCCATGC-------CCTCGC--------------------------GCA------GCA-GCACAT--------GCTGCAAC-----------------------------TGCAGCCGCA---------------------ACA---------------------------------------TCACCAGCAGCAGCAGCA---------------------------CAA--------T-----------------------G--------------CCA-------------------------------------------------------------------CAAG-----TGAATGATACAGTCAGTAC---------------CTGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........................................................................................................................................................................................CAGCAACTCCATGC-------CCTCGC--------------------------GCA------GCA-...............................................................................................................................................................................................................................................................................................................................................2611.0010010
..............................................................................................................................................................................................CAACTCCATGC-------CCTCGC--------------------------GC..........................................................................................................................................................................................................................................................................................................................................................1911.0010010
........................................................................................................................................................................................................................................................................................................................CA---------------------ACA---------------------------------------TCACCAGCAGCAGCAGC..................................................................................................................................................................................................2220.5010010
....................................................................................A-----------------------------------------------------CAGCAGCAGCAGTC----------------------GCA---------GC................................................................................................................................................................................................................................................................................................................................................................................................................2030.3310010
................................................................................A---A-----------------------------------------------------CAGCAGCAGCAGTC----------------------GCA---------..................................................................................................................................................................................................................................................................................................................................................................................................................1930.3310010
...........................................................................................................................................AGCAGCAGCAGTC----------------------GCA---------GC................................................................................................................................................................................................................................................................................................................................................................................................................18180.0610010
droYak3
GGCAGCA------------------------GC---AA---CAGCAACAGCA---ATAGGAACAG--------------CA---A-----------------------------------------------------CAGCAGCAGCGG---CA-------------------ACA---------GCAACC-------------------------------------------------------------------------AC-----AGC---AACAGCAGCAACATCAACATCATCGCAGCAGCAGCA---------------------ACA---------------------------------------TCACC----GCAACAGCAACAGCCTC-----------------------------GCGTTGC--GTGTG------------------------------------------------------------------------------------------TGCGTG-----CATGTGAGT------------TTGTGTTGGCAACTTCGTTGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............................................................................CA---A-----------------------------------------------------CAGCAGCAGCGG---CA-------------------AC............................................................................................................................................................................................................................................................................................................................................................................................................................1990.11100100000000
droEre2
AGCAACA------------------------CC---AG---CAGTC---GCAGCAGCAGCAGCAG--------------CA---A-----------------------------------------------------CAGCAGCAGCAG---CA---GTC-------------GCA---------GCAGCAACTCCATGC-------CCTCGC--------------------------GCA------GCA-GCACAT--------GCTGCAGC-----------------------------TGCAGCCGCA---------------------ACA---------------------------------------CCACCAGCAGCAGCAGCA---------------------------CAA--------T-----------------------G--------------CCA-------------------------------------------------------------------CAAG-----TGAATGATACAGTCAGTAC---------------CTGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------------------------------------------------------------------CAAG-----TGAATGATACAGTCA......................2011.0010000010
...............................CC---AG---CAGTC---GCAGCAGCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2030.6720000110
......................................................................................................................................................................................................................................................................................................................CGCA---------------------ACA---------------------------------------CCACCAGCAGCAGC.....................................................................................................................................................................................................2120.5011000000
......A------------------------CC---AG---CAGTC---GCAGCAGCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.3310000100
......A------------------------CC---AG---CAGTC---GCAGCAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1830.3310000010
............................................................................................................................................GCAGCAGCAG---CA---GTC-------------GCA---------GCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................2370.1410000010
...........................................................................................................................................AGCAGCAGCAG---CA---GTC-------------GCA---------GC................................................................................................................................................................................................................................................................................................................................................................................................................2190.1110000010
...............................................................................................................................................GCAGCAG---CA---GTC-------------GCA---------GCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................20150.0710000010
..........................................AGTC---GCAGCAGCAGCAGCAG--------------C............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21160.0610000100
..............................................................................................................................................AGCAGCAG---CA---GTC-------------GCA---------GCA...............................................................................................................................................................................................................................................................................................................................................................................................................19170.0610000010
................................................................................................................................................................................................................................................................................................................................................CA---------------------------------------CCACCAGCAGCAGCAGC..................................................................................................................................................................................................19200.0511000000
...........................................................CAGCAG--------------CA---A-----------------------------------------------------CAGCAGCAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000
..................................................CAGCAGCAGCAGCAG--------------CA---A-----------------------------------------------------CAGCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510000010
............................................................AGCAG--------------CA---A-----------------------------------------------------CAGCAGCAGCAG---...................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510001000

Generated: 05/18/2015 at 02:33 AM