ID:

dmo_2377

 Coordinate:

scaffold_6680:6321272-6321422 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-10.9 -10.9 -10.6 -10.6

Flybase annnotation

CDS [Dmoj\GI12315-cds]; exon [dmoj_GLEANR_12335:2]; intron [Dmoj\GI12315-in]

Repeatable elements

NameClassFamilyStrand
CR1-1_DWilLINECR1-
mature
  1. scaffold_768:1610-1637 +
  2. scaffold_3783:3892-3919 +
  3. scaffold_4247:699-726 +
  4. scaffold_4711:6502-6529 +
  5. scaffold_4891:179-206 +
  6. scaffold_5380:1517-1544 +
  7. scaffold_5562:1213-1240 +
  8. scaffold_5995:2287-2314 +
  9. scaffold_6262:69123-69150 +
  10. scaffold_6295:1724-1751 +
  11. scaffold_6473:2606921-2606948 +
  12. scaffold_6488:79991-80018 +
  13. scaffold_6495:49340-49367 +
  14. scaffold_6496:18868079-18868106 +
  15. scaffold_6498:1726179-1726206 +
  16. scaffold_6540:5532430-5532457 +
  17. scaffold_6540:11397389-11397416 +
  18. scaffold_6540:23452747-23452774 +
  19. scaffold_6541:2366898-2366925 +
  20. scaffold_6680:24685822-24685849 +
  21. scaffold_558:2485-2512 -
  22. scaffold_1882:4904-4931 -
  23. scaffold_3504:107-134 -
  24. scaffold_5282:321-348 -
  25. scaffold_6117:39729-39756 -
  26. scaffold_6308:1647135-1647162 -
  27. scaffold_6327:34897-34924 -
  28. scaffold_6473:8829777-8829804 -
  29. scaffold_6473:16825823-16825850 -
  30. scaffold_6482:80918-80945 -
  31. scaffold_6498:1805133-1805160 -
  32. scaffold_6498:2921120-2921147 -
  33. scaffold_6540:427697-427724 -
  34. scaffold_6540:618804-618831 -
  35. scaffold_6540:20380861-20380888 -
  36. scaffold_6541:5980-6007 -
  37. scaffold_6541:11190-11217 -
  38. scaffold_6541:816905-816932 -
  39. dmo_2377  scaffold_6680:6321327-6321354 -
  40. scaffold_6680:20827663-20827690 -
star
  1. scaffold_558:2443-2467 -
  2. scaffold_3328:3930-3954 -
  3. scaffold_3504:65-89 -
  4. scaffold_3803:1133-1157 -
  5. scaffold_4402:1364-1388 -
  6. scaffold_4423:14748-14772 -
  7. scaffold_6327:34855-34879 -
  8. scaffold_6451:87708-87732 -
  9. scaffold_6451:93206-93230 -
  10. scaffold_6482:80876-80900 -
  11. scaffold_6491:180658-180682 -
  12. scaffold_6498:1805091-1805115 -
  13. scaffold_6500:2182915-2182939 -
  14. scaffold_6540:618762-618786 -
  15. scaffold_6540:20380819-20380843 -
  16. scaffold_6541:11148-11172 -
  17. scaffold_6541:816863-816887 -
  18. dmo_2377  scaffold_6680:6321285-6321309 -
  19. scaffold_6680:20827621-20827645 -
  20. scaffold_6680:23840474-23840498 -

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
ATCTCAGAGCCAAGCTTAATATGTTAGAGAAAGAAAACGATTCCCTCAAGGTATGCTCAAGTCATTTAACATTAGTTATTTATACGGACTTCAGTAAAGCATTTGACTCAGTACATCATTACATACTAATTCTTAAGCTTGAACGCTTAGGATTTTCACCCAGTCTTGTCTCTTGGATTTCATCCTATTTAACGGGTAGAACCCAAAGAGTCTTGCTGAGAACAGCTATGTCTAAACTTATCTTTGTTTCG
**********************************************************************************************************************.............................((((........((((........)).)).......)))).*************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V041
embryo
......................................................................................................................TTACATACTAATTCTTAAGCTTGAACGC......................................................................................................... 28 0 20 1.30 26 0 26 0
..........................GAGAAAGAAAACGATTCCCT............................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0
......................................................................................................................TTACATACTAATTCTTAAGCTTGAAC........................................................................................................... 26 0 20 0.75 15 15 0 0
...................................................................................................................................................................TCTTGTCTCTTGGATTTCATCCTAT............................................................... 25 0 20 0.35 7 7 0 0
...........................................................................................CAGTAAAGCATTTGACTCAGTACATCAA.................................................................................................................................... 28 1 20 0.10 2 2 0 0
...................................................................................ACGGACTTCAGTAAAGCATTTG.................................................................................................................................................. 22 0 20 0.05 1 1 0 0
.......................................................................................................TGACTCAGTACATCATTACATACTAAT......................................................................................................................... 27 0 20 0.05 1 1 0 0
................................................................................TATACGGACTTCAGTAAAGCATT.................................................................................................................................................... 23 0 20 0.05 1 1 0 0
.......................................................................................................................................................................GGCTCTTGGATTTCATCCTATTTAAC.......................................................... 26 1 20 0.05 1 0 1 0
...................................................................................................................................................TAGGATTTTCACCCAGTCTTGTC................................................................................. 23 0 20 0.05 1 1 0 0
...........................................................................................................CCAGTACATCATTACATACTAATTCT...................................................................................................................... 26 1 20 0.05 1 1 0 0
......................................................................................................................TTACATACTAATTCTTAAGCTTGAACG.......................................................................................................... 27 0 20 0.05 1 0 1 0
.............................................................................................................................................................................................TAACGGGTAGAACCCAAAGAGTCTTGC................................... 27 0 20 0.05 1 0 1 0
...................................................................................................................................................................TCTTGTCTCTTGGATTTCATCCTATC.............................................................. 26 1 20 0.05 1 0 1 0
.......................................................................................................................TACATACTAATTCTTAAGCTTGAACAC......................................................................................................... 27 1 20 0.05 1 0 1 0
......................................................................................................................TTACATACTAATTCTTAAGC................................................................................................................. 20 0 20 0.05 1 0 1 0
...................................................................................................................................................................TCTTGTCTCTTGGATTTCATC................................................................... 21 0 20 0.05 1 0 0 1
.......................................................................................................................................................................GTCTCTTGGATATCATCCTATTTAACGG........................................................ 28 1 20 0.05 1 1 0 0
......................................................................................................................................................................................TCCTATTTAACGGGTAGAACC................................................ 21 0 20 0.05 1 0 1 0
..........................................................................................TTAGTAAAGCATTCGACT............................................................................................................................................... 18 2 20 0.05 1 0 0 1
...........................................................................................................TCAGTACATCATTACATACTAATTC....................................................................................................................... 25 0 20 0.05 1 1 0 0
.....................................................................................................................................................................................................................................GTCTAAACTTATCTTTGTT... 19 0 20 0.05 1 1 0 0
.............................................................................................................................................................................................................AACAGTCTTGCTGAGAACAGC......................... 21 1 20 0.05 1 0 1 0
............................................................................................AGTAAAGCATTAGACTCAGTACATC...................................................................................................................................... 25 1 20 0.05 1 1 0 0
........................................................................................CTTCAGTAAAGGATTTGACTCAGTACA........................................................................................................................................ 27 1 20 0.05 1 1 0 0

Anti-sense strand reads

TAGAGTCTCGGTTCGAATTATACAATCTCTTTCTTTTGCTAAGGGAGTTCCATACGAGTTCAGTAAATTGTAATCAATAAATATGCCTGAAGTCATTTCGTAAACTGAGTCATGTAGTAATGTATGATTAAGAATTCGAACTTGCGAATCCTAAAAGTGGGTCAGAACAGAGAACCTAAAGTAGGATAAATTGCCCATCTTGGGTTTCTCAGAACGACTCTTGTCGATACAGATTTGAATAGAAACAAAGC
***************************************************************.............................((((........((((........)).)).......)))).********************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V041
embryo
 V110
male body		 V049
head
......................................................................................................................................................................................................................CGACTCTTGTCGATACAGATTTGAA............ 25 0 20 13.90 278 0 278 0 0 0
.......................................................................................................................................................................................................................GACTCTTGTCGATACAGATTTGAA............ 24 0 20 4.85 97 89 8 0 0 0
.....................................................................................................................................................................................................................ACGACTCTTGTCGATACAGATTTGAA............ 26 0 20 4.05 81 79 0 2 0 0
........................................................................................................................................................AAAAGTGGGTCAGAACAGAGAACCT.......................................................................... 25 0 20 3.25 65 65 0 0 0 0
....................................................................................................................................................................................................................AACGACTCTTGTCGATACAGATTTGAA............ 27 0 20 2.45 49 49 0 0 0 0
......................................................................................................................................................................................................................CGACTCTTGTCGATACAGATTTGGA............ 25 1 20 1.25 25 0 25 0 0 0
..............................................................................................................................................................................................................TCTCAGAACGACTCTTGTCGATACAGAT................. 28 0 20 1.25 25 0 25 0 0 0
......................................................................TAAACAATAAATATGCCTGAAGTCATTT......................................................................................................................................................... 28 1 1 1.00 1 1 0 0 0 0
............................................................................ATAAATATGCCTGAAGTCATTTCGT...................................................................................................................................................... 25 0 20 0.70 14 14 0 0 0 0
........................................................................................................................................................................................................................ACTCTTGTCGATACAGATTTGAA............ 23 0 20 0.70 14 14 0 0 0 0
................................................................................................................................................................................................................TCAGAACGACTCTTGTCGATACAGAT................. 26 0 20 0.70 14 14 0 0 0 0
..................................................................................................................................................AATCCTAAAAGTGGGTCAGAACAGAGA.............................................................................. 27 0 20 0.65 13 13 0 0 0 0
.................................................................................................................................................GAATCCTAAAAGTGGGTCAGAACAGAGA.............................................................................. 28 0 20 0.65 13 13 0 0 0 0
..................................................................................................CGTAAACTGAGTCATGTAGTAATGTAT.............................................................................................................................. 27 0 20 0.60 12 8 4 0 0 0
.......................................................................................................................................................................................................................GACTCTTGTCGATACAGATTTGA............. 23 0 20 0.40 8 8 0 0 0 0
...............................................................................................................................................................................................................CTCAGAACGACTCTTGTCGATACAGATT................ 28 0 20 0.30 6 3 3 0 0 0
......................................................................................................................................................................................................................CGACTCTTGTCGATACAGATTTGAAT........... 26 0 20 0.30 6 0 6 0 0 0
..................................................................................................................................................................................................................AGAACGACTCTTGTCGATACAGATTTGAA............ 29 0 20 0.25 5 0 5 0 0 0
..........................................................................CAATAAATATGCCTGAAGTCATTTCGT...................................................................................................................................................... 27 0 20 0.25 5 5 0 0 0 0
.....................................................................................................................................................CCTAAAAGTGGGTCAGAACAGAGAACCT.......................................................................... 28 0 20 0.25 5 5 0 0 0 0
.................................................................................................................................................................................................................CAGAACGACTCTTGTCGATACAGAT................. 25 0 20 0.25 5 5 0 0 0 0
...................................................................................................................................................................................................CATCTTGGGTTTCTCAGAACGACTCTT............................. 27 0 20 0.20 4 1 2 1 0 0
................................................................................................................................................................................................................TCAGAACGACTCTTGTCGATACAGA.................. 25 0 20 0.15 3 3 0 0 0 0
......................................................................................................................................................................................................................CGACTCTTGTCGATACAGATTTGAAC........... 26 1 20 0.15 3 0 3 0 0 0
..................................................................................................................................................................................................CCATCTTGGGTTTCTCAGAACGACT................................ 25 0 20 0.15 3 2 1 0 0 0
.............................................................................................................................................................TGGGTCAGAACAGAGAACCT.......................................................................... 20 0 20 0.15 3 3 0 0 0 0
............................................................................................................................................................GTGGGTCAGAACAGAGAACCTAAA....................................................................... 24 0 20 0.15 3 3 0 0 0 0
..............................................................................................ATTTCGTAAACTGAGTCATGTAGT..................................................................................................................................... 24 0 20 0.15 3 3 0 0 0 0
............................................................................................................................................................................................................................TTGTCGATACAGATTTGAATAGAAA...... 25 0 20 0.15 3 3 0 0 0 0
.......................................................................................................................................................TAAAAGTGGGTCAGAACAGAGAACCT.......................................................................... 26 0 20 0.15 3 0 3 0 0 0
......................................................................................................................................................................................................................CGACTCTTGTCGATACAGATTTG.............. 23 0 20 0.15 3 3 0 0 0 0
.............................................................................................................................................................................................................................TGTCGATACAGATTTGAATAGAAAC..... 25 0 20 0.15 3 3 0 0 0 0
......................................................................................CTGAAGTCATTTCGTAAACTGAGTCATG......................................................................................................................................... 28 0 20 0.10 2 0 2 0 0 0
..................................................................................................................................................................................................................ATAACGACTCTTGTCGATACAGATTTGAA............ 29 1 20 0.10 2 2 0 0 0 0
..........................................................................CAATAGATATGCCTGAAGTCATTTCGT...................................................................................................................................................... 27 1 20 0.10 2 0 0 2 0 0
........................................................................................................CTGAGTCATGTAGTAATGTATGAT........................................................................................................................... 24 0 20 0.10 2 0 1 1 0 0
..............................................................................................ATTTCGTAAACTGAGTCATGTAGTAAT.................................................................................................................................. 27 0 20 0.10 2 2 0 0 0 0
.......................................................................................................................................................TAAAAGTGGGTCAGAACAGAGATCCT.......................................................................... 26 1 20 0.10 2 0 2 0 0 0
................................................................................................TTCGTAAACTGAGTCATGTAGTAA................................................................................................................................... 24 0 20 0.10 2 2 0 0 0 0
...............................................................................................................................................................................................TGCCCATCTTGGGTTTCTCAGAACG................................... 25 0 20 0.10 2 0 2 0 0 0
......................................................................................................................................................................................................................CGACTCTTGTCGATACAGATTTGAT............ 25 1 20 0.10 2 0 2 0 0 0
................................................................................................TTCGTAAACTGAGTTATGTAGTAAT.................................................................................................................................. 25 1 20 0.10 2 2 0 0 0 0
...............................................................................................TTTCGTAAACTGAGTCATGTAGTAAT.................................................................................................................................. 26 0 20 0.10 2 2 0 0 0 0
.................................................................................................................................................................TCAGAACAGAGAACCTAAAGTAGCAT................................................................ 26 1 20 0.10 2 0 2 0 0 0
......................................................................................................................................................CTAAAAGTGGGTCAGAACAGAGAAC............................................................................ 25 0 20 0.10 2 0 2 0 0 0
........................................................................................GAAGTCATTTCGTAAACTGAGTCATGT........................................................................................................................................ 27 0 20 0.10 2 2 0 0 0 0
....................................................................................................AAAACTGAGTCATGTAGTAATGTATGAT........................................................................................................................... 28 1 20 0.10 2 2 0 0 0 0
........................................................................................................CTGAGTCATGTAGTAATGTATGATT.......................................................................................................................... 25 0 20 0.10 2 0 2 0 0 0
..............................................................................................................................................................GGGTCAGAACAGAGAACCTAAAGT..................................................................... 24 0 20 0.10 2 2 0 0 0 0
...........................................................................................................................................................................................................................CTTGTCGATACAGATTTGAA............ 20 0 20 0.10 2 2 0 0 0 0
...............................................................................................................................................................................................TGCCCATCTTGGGTTTCTCAGAACGAC................................. 27 0 20 0.10 2 0 2 0 0 0
.....................................................................................CCTGAAGTCATTTCGTAAACTGAGTCA........................................................................................................................................... 27 0 20 0.10 2 2 0 0 0 0
................................................................................................................................................CGAATCCTAAAAGTGGGTCAGAGC................................................................................... 24 1 20 0.05 1 0 1 0 0 0
..............................................................................AAATATGCCTGAAGTCATTTCGT...................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0
.....................................................................................CCTGAAGTCATTTCGTAAACTGAGT............................................................................................................................................. 25 0 20 0.05 1 0 1 0 0 0
...............................................................................................................................................................GGTCAGAACAGAGAACCT.......................................................................... 18 0 20 0.05 1 1 0 0 0 0
...............................................................................................................................................GCGAATCCTAAAAGTGGGTCAGAACA.................................................................................. 26 0 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................GGTCAGAACAGAGAACCTAAAGTAGGAT................................................................ 28 0 20 0.05 1 1 0 0 0 0
...........................................................................AATAAATATGCCTGAAGTCATTTCG....................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0
..................................................................................................................................................................................................................TGAACGACTCTTGTCGATACAGATTTGAA............ 29 1 20 0.05 1 0 1 0 0 0
......................................................................................CTGAAGTCATTTCGTAAACTGAGTCA........................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0
....................................................................................................................................................................................................................AACGACTCTTGTCGATACAGATTTGGA............ 27 1 20 0.05 1 0 1 0 0 0
.................................................................................................................................................................................................................................GATACAGATTTGAATAGAAA...... 20 0 20 0.05 1 0 0 1 0 0
......................................................................................CTGAAGTCATTTCGTAAACTGAGTC............................................................................................................................................ 25 0 20 0.05 1 1 0 0 0 0
.....................................................................................................................................................................................................TCTTGGGTTTCTCAGAACGACTCTT............................. 25 0 20 0.05 1 0 1 0 0 0
......................................................................................................................................................................................................................CGACTCTTGTCGATACAGATTTGAATA.......... 27 0 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................................................................................TCGATACAGATTTGAATAGA........ 20 0 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................................................................CTCAGAACGACTCTTGTCGATACTGAT................. 27 1 20 0.05 1 0 1 0 0 0
...........................................................................................................................................................................................................................CTTGTCGATACAGATTTGAATAGAAAC..... 27 0 20 0.05 1 0 1 0 0 0
...................................................................................................GTAAACTGAGTCATGTAGTAAT.................................................................................................................................. 22 0 20 0.05 1 1 0 0 0 0
...................................................................................................................................................ATCCTAAAAGTGGGTCAGAACAGAGAACC........................................................................... 29 0 20 0.05 1 0 1 0 0 0
................................................................................ATATGCCTGAAGTCATTTCGTAAAC.................................................................................................................................................. 25 0 20 0.05 1 1 0 0 0 0
.............................................................................................................................................................................................................TTCTCAGAACGACTCTTGTCGATA...................... 24 0 20 0.05 1 0 1 0 0 0
............................................................................................................................................................................AACCTAAAGTAGGATAAATTGCCCAT..................................................... 26 0 20 0.05 1 1 0 0 0 0
..........................................................................................................................................................AAGTGGGTCAGAACAGAGGAACT.......................................................................... 23 2 20 0.05 1 0 1 0 0 0
..............................................................................................................................................................................................................TCTCAGAACGACTCTTGTCGATACAGA.................. 27 0 20 0.05 1 0 1 0 0 0
.....................................................................................................AAACTGAGTCATGTAGTAATGTAT.............................................................................................................................. 24 0 20 0.05 1 1 0 0 0 0
................................................................................................................................................CGAATCCTAAAAGTGGGTCAGAACACAG............................................................................... 28 1 20 0.05 1 0 1 0 0 0
......................................................................................................................................................................................................................CGACTCTTGTCGATACAGA.................. 19 0 20 0.05 1 0 1 0 0 0
..............................................................................................ATTTCGTAAACTGAGTCATGTAGGAAT.................................................................................................................................. 27 1 20 0.05 1 0 1 0 0 0
...........................................................................................................................................................................................AAATTGCCCATCTTGGGTTTCTCAGAACG................................... 29 0 20 0.05 1 1 0 0 0 0
.......................................................................................................................................................AAAAAGTGGGTCAGAACAGAGAACC........................................................................... 25 1 20 0.05 1 1 0 0 0 0
......................................................................................................................................................................................................................CGACTCTTGTCGATACAGATTTTA............. 24 1 20 0.05 1 0 1 0 0 0
..............................................................................................................................................................................................................TCTCAGAACGACTCTCGTCGATACAGAT................. 28 1 20 0.05 1 0 1 0 0 0
.....................................................................................................................................................................................................................ACGATTCTTGTCGATACAGATTTGAA............ 26 1 20 0.05 1 0 1 0 0 0
........................................................................................................................................................................................................................ACTCTTGTCGATACAGATTTGAAC........... 24 1 20 0.05 1 1 0 0 0 0
.........................................................................................................................................................................................................................CTCTTGTCGATACAGATTTGAATAGAAA...... 28 0 20 0.05 1 1 0 0 0 0
..........................................................................................................GAGTTATGTAGAAATGTACGAT........................................................................................................................... 22 3 20 0.05 1 0 0 1 0 0
.............................................................................................................................................................................................................................CGTCGATACAGATTTGAATAGAAACA.... 26 1 20 0.05 1 0 1 0 0 0
..................................................................................ATGCCTGAAGTCATTTCGTAAACTGAGT............................................................................................................................................. 28 0 20 0.05 1 0 1 0 0 0
.........................................................................................................TGAGTCATGTAGTAATGTAT.............................................................................................................................. 20 0 20 0.05 1 1 0 0 0 0
...................................................................................................................................................................................................................GAACGACTCTTGTCGATACAGATTTGAA............ 28 0 20 0.05 1 0 0 1 0 0
.........................................................................................................................................................................................................................CTCTTGTCGATACAGATTTGAATA.......... 24 0 20 0.05 1 0 1 0 0 0
..............................................................................................................................................................................................................CCTCAGAACGACTCTTGTCTA........................ 21 2 20 0.05 1 0 1 0 0 0
....................................................................................................................................................................................................................AACGACTCTTGTCGATACAGATTTGAAT........... 28 0 20 0.05 1 1 0 0 0 0
............................................................................ATAAATATGCCTGAAGTCATTTCG....................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0
..............................................................................................GTTTCGTAAACTGAGTCATGTAGTAAT.................................................................................................................................. 27 1 20 0.05 1 1 0 0 0 0
................................................................................ATATGCCTGAAGTCATTTCGT...................................................................................................................................................... 21 0 20 0.05 1 0 0 0 1 0
................................................................................ATATGCCTGAAGTCATTTCGTA..................................................................................................................................................... 22 0 20 0.05 1 0 0 1 0 0
..........................................................................CAATAAATATGCCTGAAGTCATT.......................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0
......................................................................................................................................................................................................................CGACTCTTGTCGATACAGAT................. 20 0 20 0.05 1 1 0 0 0 0
.................................................................................................................................................................................................................CAGAACGACTCTTGTCGATACAGATTT............... 27 0 20 0.05 1 1 0 0 0 0
......................................................................................................................................................................ACAGAGAACCTAAAGTAGGATAAATTGC......................................................... 28 0 20 0.05 1 0 1 0 0 0
...................................................................................................GTAAACTGAGTCATGTAGTAATGTAT.............................................................................................................................. 26 0 20 0.05 1 0 1 0 0 0
...............................................................................................................................................................................................TGCCCATCTTGGGTTTCTCAGAACGACTC............................... 29 0 20 0.05 1 0 1 0 0 0
..........................................................................................AGTCATTTCGTAAACTGAGTCATGTATT..................................................................................................................................... 28 1 20 0.05 1 0 1 0 0 0
......................................................................................................................................................................................AGGATAAATTGCCCATCTTGGGTTTCT.......................................... 27 0 20 0.05 1 1 0 0 0 0
...................................................................................................................................................ATCCTAAAAGTGGGTCAGAACAGCGA.............................................................................. 26 1 20 0.05 1 0 1 0 0 0
...................................................................................................................................................ATCCTAAAAGTGGGTCAGAACAGAGT.............................................................................. 26 1 20 0.05 1 0 1 0 0 0
...................................................................................................................................................CTCCTAAAAGTGGGTCAGAACAGAGA.............................................................................. 26 1 20 0.05 1 0 1 0 0 0
..............................................................................................................................................................................................................CCTCAGAACGACTCTTGTCGATAC..................... 24 1 20 0.05 1 0 1 0 0 0
.....................................................................................................................................ATTCGAACTTGCGAATCCTAAAAGT............................................................................................. 25 0 20 0.05 1 1 0 0 0 0
..................................................................................................CGTAAACTGAGTCATGTAGTAATGTATG............................................................................................................................. 28 0 20 0.05 1 0 1 0 0 0
..................................................................................................................................................................................................................AGAACGACTCTTGTCGATACAGATTT............... 26 0 20 0.05 1 1 0 0 0 0
...................................................................................................................................................................................................CATCTTGTGTTTCTCAGAACGACCCT.............................. 26 2 20 0.05 1 0 1 0 0 0
..............................................................................................................................................TGCGAATCCTAAAAGTGGGTCAGAAC................................................................................... 26 0 20 0.05 1 0 0 0 1 0
..............................................................................................GGTTCGTAAACTGAGTCATGTAG...................................................................................................................................... 23 2 20 0.05 1 1 0 0 0 0
..................................................................................................CGTAAACTGAGTCATGTAGTAATGTGT.............................................................................................................................. 27 1 20 0.05 1 0 1 0 0 0
.........................................................................................................................................................................................................................CTCTTGTCGATACAGATTTGAATAGA........ 26 0 20 0.05 1 1 0 0 0 0
......................................................................................................................................................................................AGGATAAATTGCCCATCTTGGGTT............................................. 24 0 20 0.05 1 1 0 0 0 0
.........................................................................................................................................................................................................................CTCTTGTCGATACAGATTTGAATAGAGA...... 28 1 20 0.05 1 0 1 0 0 0
......................................................................................................................................................................................................CTTGGGTTTCTCAGAACGACTCTT............................. 24 0 20 0.05 1 0 1 0 0 0
......................................................................................................................................................................................................................CGACTCTTGTCGATACAGATT................ 21 0 20 0.05 1 1 0 0 0 0
................................................................................................................................................CGAATCCTAAAAGTGGGTCAGAACAGAG............................................................................... 28 0 20 0.05 1 0 1 0 0 0
...........................................................................................................................................................................................................................CTTGTCGATACAGATTTGAATAGAAACA.... 28 0 20 0.05 1 0 1 0 0 0
.................................................................................................................................................................................................CCCATCTTGGGTTTCTCAGAACGACTCTT............................. 29 0 20 0.05 1 1 0 0 0 0
......................................................................................................................................................................................................................CGACTCTTGTCGCTACAGATTTGAA............ 25 1 20 0.05 1 0 1 0 0 0
.................................................................................................................................................................................................CCCATCTTGGGTTTCTCAGAACGACTC............................... 27 0 20 0.05 1 0 1 0 0 0
.............................................................................................................................................................................................................................TGTCGATACAGATTTGAATAGAAACAA... 27 0 20 0.05 1 0 0 0 1 0
..........................................................................................................................................................................................................................TCTTGTCGATACAGATTTGAATAG......... 24 0 20 0.05 1 0 1 0 0 0
...................................................................................................................................................................................................................CAACGACTCTTGTCGATACAGATTTGAA............ 28 1 20 0.05 1 0 1 0 0 0
.....................................................................................................................................................................................................................ACGACTCTTGTCGATACAGATTTGAAT........... 27 0 20 0.05 1 1 0 0 0 0
....................................................................................................................GTAATGTATGATTAAGAATTCGAACT............................................................................................................. 26 0 20 0.05 1 0 0 0 1 0
............................................................................................................................................................GTGGGTCAGAACAGAGAACCT.......................................................................... 21 0 20 0.05 1 0 0 1 0 0
..........................................................................................................GAGTTATGTAGAAATGTAAGAT........................................................................................................................... 22 3 20 0.05 1 0 0 0 0 1
...............................................................................................................................................................................................................CTCAGAACGACTCTTGTCGATACAGA.................. 26 0 20 0.05 1 1 0 0 0 0
.............................................................................................................................................................................................................................TGTCGATACAGATTTGAATAGATA...... 24 1 20 0.05 1 0 1 0 0 0
.......................................................................................................................................................TAAAAGTGGGTCAGAACAGAGAA............................................................................. 23 0 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6680:6321222-6321472 - dmo_2377 ATCTCA----------GAGCCAAG-C--------TTAATA------------------------TGTTAGAGAAAGAAAACGATTCCCTCAAGGT--------------ATGCTCA-------AGTCATTTAACATTAGTT-ATTTATACGGACTTCAGTAAAGCATTTGACTCAGTACATCATTACATA------------CTAATTCTTAAGCTTGAACGCTTAGGATTTTCACCCAGTCTTGTCTCTTGGATTTCATCCTATTTAACGGGTAGAACCCAAAGAGTCTTGCTGAGAACAGCTATGTCTAAACTTATCTTTGTTTCG
droVir3 scaffold_12958:2548111-2548358 + TTCTCAAAAAGTTTTGAAAATAAT-T--------TTG-------------------------------AAACTAAGAAGACGGTAAC--CAAACT--------------A----CT-------TTCATACAAACTGATGTC-ATTTACACTGACTTCAGTAAGGCGTTTGATTCTGTGCACCATGACATT------------TTACTTTTTAAACTTGACCGAATAGGTTTCCCTCTGTCCCTTTTACTTTGGATTAATTCTTATTTAAAAGGTAGGACCCAAAGAGTAATACTGAGGTTGACTACCTCTAAAAGGGTTCACGTTACT
droGri2 scaffold_6937:1556-1729 + ------------------------------------------------------------------------------------------------------------------------------------------GTC-GTTTATACAGACTTCAGTAAGGCCTTTGATTTTGTTAACCATTGTCTC------------CTTCTCAATAAACTAAACCTTATAAGATTTCC---TAACCTTCTTGCATGGATTTCTGAGTATCTGAGTAACAGATCTCAAAAAGTTGTTTTGAAAACATTAATTTCTAAACCTATCCTAGTTATC
droWil2 scf2_1100000000118:1176-1393 - AAAAAAA----------AA----AATA-----------------------------------------------AGAAC-----------------------------ACGATATA-------ATCCAACATTTAATTTAT-ATTTATACTGACTTTAGTAAGGCTTTCGATACGGTTGATCATTCTATG------------CTTCTCGCGAAACTTAACATAATGGGTTTTTCCCCAAAACTGTTGGCTTGGTTAAAGTCGTATCTTATTGGCAGAACCCAAAAGGTGTCTTTTCGTTCCTCGATATCTAAAACTGTTCGAGTTACG
dp5 Unknown_group_71:1083-1342 + AGAGACA----------AA----CCTT----------TAC------------------------AAACATAAAAGCAACACCACACCCTGGAGGCACAGCCCAAAGGGCTCAAATT-------GGTTTGCAGACGACAGTA-GTTTTTACGGACTTCAGCAAGGCATTCGATTCTGTGAACCATGCTCTG------------CGTATTCACAAGCTCTCTTTATTAGGGTTCCCAACGCATCTTCTAGATCTGATTTTGTCCTATCTCTCTAACCGTACTCAACGTGTTTTGTTTTCTAACGTGTTGTCAAATACTGTTAATGTTACT
droPer2 scaffold_201:131833-132077 - GCTTAAT----------AA----A-A--------AAAAAAAAAAAAACCTCTTTCATTA----------------------------------------TTAAAGGCTTTCAAGGT-------AACTTACAGACGGATGTT-ATTTACAGCGACTTTAGTAAAGCATTCGACTCTGTAAACCATTCCCTT------------TTAGCACATAAACTTGACCTTTTAGGGTTTGCGCACAACCTCCTGAGATGGACTTCTAGCTATCTCTGTTCTAGGTTTCAAAGATTCCTCTTCGAAAACTCTCTCTCTTTACCATTAAAGGTTTCT
droAna3 scaffold_418:797-1000 - GCTCAAA------------------------GTG------------------TCAGTGACAAACACTTATTT----------------------------TGAGACCGCTCGAATC-------GGTTTAC-------AGTT-ATTTGCAAGCTATGCAGTAAAGCATTTAACTCTGTTAACCGTTCGCTT------------CTTATAATTAAACTCAGTCTTTTGGGATTCCCAACCGATCTTCTTATTTGGATTTCGAGCTACTTATCTGGGAGAACCCAACGTGTTTCTC---------------------------GCTTTTAG
droBip1 scf7180000395906:29961-30210 + ATAGAGG-----CTTGGAACTTTT-T--------TTAAGA------------------------TTTGTAAGGGAGAACTCTATCC--------------------CTTTTGTAAG-------GGATATCAAACCGATGTA-ATTTACACAGACTTCAGCAAAGCATTTGATTCAGTTAATCACTCACTT------------TTGTTGAGTAAACTGAATATGCTGGGTTTTCCTAAAGACCTCTTAACGTGGATCTCCAGCTACCTAGATGGAAGGACACAAAGAGTCTTATTTAAAAACATACAGTCCCGTCTGGTCCGTGCTACA
droKik1 scf7180000301881:24965-25214 - ATCTCC----------GTGTCAAC-A--------GTAATA------------------------TTTTAAACGAAGGACATCAG---------------CAAAGGGCTTCAGTTAT-------AACTTCCAGACAGATGTA-ATCTATACTGATTTTAGTAAAGAATTTGACTCACCTAACCATTCTATC------------CTTGTTAGAAAACTCGATATAATGGGATTTCTGGTTGATCTTCCTAGATGGATCTGAAGTTATTTGAAAGACAGGACGCAAAAGGTCCTCTTTAAAAATAGCTTATCTAATGTTCTCAAGGTTACT
droFic1 scf7180000454091:8845-9064 + AACGAAT-----CTTTTAA----AGCTCACGTTC------------------TTTGTGA----------------------------------------TAAATGGCTT----------------------------TATC-ATTTACACAGACTTCAGTAAAGCATTTGACTCTGTAAATCACTTCCTA------------CTGATTCGCAAACTTGACATGATAGGGTTTCCAGCTGATCTTTTAAGTTGGATCTTTAGTTATCTCAGTGGCCGAACGCAAAGAGTCCTTTTCAAAAATTCCTTAAGTAGTCTCCTCAGAGTTACC
droEle1 scf7180000490924:21527-21740 + TATAG----------------------------------------------------------------------------------------------TTAAGGGATTTAATAAT-------AAAATGCAGACTGATGTTATTATATACAGATTTTAATAAAGCTTTTGATTCTGTAAACCATTCTCTT------------CTTTTCGTTAAATTAGATCAGCTCGA-TTTTCAAATAATCTTTTAACTTGGATTTCAAGTTATTTGAACGGAAGAACTCAGAGGGTTATTTTTAAAAATGCAGATTCCAATATGATTAACATAACA
droRho1 scf7180000777609:1866-2101 + ACCTTC----------TAG----AGCTCACTACA------------------TTAGTGA----------------------------------------TAAAAGGCTTCAATAGT-------AGTTTTCAAACAGACGTC-ATTTACACTGACTTTAGTAAAGCATTTGACTCTGTAAATCACTTACGT------------CTTATTCAAAAACTTGACCTGTTAGGTTTTTCAATTGATCTGCTTAAATGGATATCAAGTTATCTGAATGGCAGGTCACAAAGGGTCCTTTTTAAAAATTCAATTTCTGAAATTCTCCGCGTTATC
droBia1 scf7180000301529:842-1097 + GAGCTAA----------------G-C--------TAGAAA------------------------CATTAAAACAAGCAGACGT-----TAAAGGT--------------ATTT--GAATTCTTAATCCTCCACCTCTTATT-ATTAATCCCAATTGCCTTGTAGTAGATAAAGCAATAATTTTTTTTAGATCAAATTCAAAATTAGCTCCTAATCCAG-CTATAAATGGTTTCCTGGTAATCTATTATCTTGGATTTCATGTTACTTAAATGGTAGGACTCAGAGAGTTATATTCAAGAATGCTGTTTCAAAATTGATCTACGTGACA
droTak1 scf7180000414750:3920-4137 - TTCCCTT----------AA----CATTGA---------TA------------------------T-------------------------------------------TCCTGACA-------CATCATCAAACTGATGTG-ATTTATACTGATTTTTCTAAAGCTTTTGATTCTGTGAACCATAAACTT------------CTTATTTTTAAATTGTCCCGTTTAGGGTTTCCTCCAAACCTACTTGACTGGATACTTTCCTACCTCTCTTTTAGAACTCAAATGGTCTGTTTTAACAATAGAATTTCCAAAATAATTAATGTTACT
droEug1 scf7180000405427:4784-4975 + AA--------------------------------------------------------------------------------------------------------------------------GTCTTCAGACAGATGTC-ATCTACACTGACTTTAGTAAAGCATTTGACTCTGTAAATCACTCACTT-------------TAGTTCATAAACTTGACTTAATCGGATTCCCATGCGATCTTCTTAAGTGGGTTGAAAGTTATCTGACTGGTAGAACGCAACGTGTTTTATTTAAAGATGTCTTGTCTGGTCCGATTTATGCTTCA
dm3 chr3LHet:2285653-2285867 + ATGATTT-----------------------------------------------------------TCTTACGTA----------------------------------GTATTAT-------AATCTTCAAACAGATGTT-GTCTACACTAACTTTAGTAAAGCATTTGACTCTGTTAATCATTCATTT------------CTAGTAAGGAAACTTGATCTTTTAGGTTTCCCTGTTGATCTTCTAAATTGGATTTCAAGCTATTTGAATGGCAGGACACAACAAGTCCTCTTTAAAAATTCTTTATCTTGTATTCTCCGAGTCACA
droSim2 2l:21728288-21728474 - AA---------------------------------------------------------------------------------------------------------------------------TCTTCAAACAGATGTC-ATCTACACTGACTTTAGTAAAGCATTTGACTCTGTTAATCATTACCTT------------CCAGTAAGGAAACTTGATCTATTAGGATTCCCTGTTGATCTTCTAGATTGGATTTCAAGCTATCTGAATGGCAGGACGCAAAAAGTCCTCTTTAAAAATTCTCTGTCTTGTTT-----TTTTGTTT
droSec2 scaffold_1398:4756-4960 + GGT-------------------------------------------------------------------------------------------------------TTTCAAAAAT-------AATTTTCAAACAGATGTC-ATCTACACTGATTTTAGTAAAGCATTTGACTCTGTTAATCATTACCTT------------CTAATAAGAAAACTTGATCTTATAGGTTTCCCTGTTGATCTTCTAAATTGGATTTCAAGCTATCTGAATGGCAGGAGACAACAAGTCCTCTTTAAAAATTCGTTATCTTCTATTCTCCGAGTCACA
droYak3 v2_chrUn_002:339630-339821 + AA---------------------------------------------------------------------------------------------------------------------------TCTTCAAACATATGTC-ATTTATACGGATTTTAGTAAAGCATTCGACTCTGTTAATCATTCACTT------------TTAATAAAAAAACTTGATTTATTATGTTTCCCTGTTGATCTCCTAAATTGGATTTTAAGTTATCTGAATGGCAGGACCCAACGGGTCCTCTTTAAAAATGTTCTTTCTTGTATTCTCCGAGTCACA
droEre2 scaffold_4929:24125728-24125923 + AA----------------------------------------------------------------------------------------------------------------AT-------AATTTCCAAACAGATGTT-ATCTACACTGTCTTCAGTAAAGCTTTTGACTCTGTTAATCATTCACTT------------TTGGTTAGGAAACTTGATTTATAAGGTTTCCCTGTTGATCTTCTAAATTGGATTTTAAGTTATCTTAATGGCAGGACGCATCGTGTCCTGTTTAAAAATTCTCTTTCTTGTATTCTCCGAGTCACA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
ATCTCA----------GAGCCAAG-C--------TTAATA------------------------TGTTAGAGAAAGAAAACGATTCCCTCAAGGT--------------ATGCTCA-------AGTCATTTAACATTAGTT-ATTTATACGGACTTCAGTAAAGCATTTGACTCAGTACATCATTACATA------------CTAATTCTTAAGCTTGAACGCTTAGGATTTTCACCCAGTCTTGTCTCTTGGATTTCATCCTATTTAACGGGTAGAACCCAAAGAGTCTTGCTGAGAACAGCTATGTCTAAACTTATCTTTGTTTCGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................................................................................................................................................................................TTACATA------------CTAATTCTTAAGCTTGAACGC.........................................................................................................28201.30260000260
.....................................................................GAGAAAGAAAACGATTCCCT...............................................................................................................................................................................................................................................2011.001100000
.......................................................................................................................................................................................TTACATA------------CTAATTCTTAAGCTTGAAC...........................................................................................................26200.75151500000
................................................................................................................................................................................................................................................TCTTGTCTCTTGGATTTCATCCTAT...............................................................25200.357700000
............................................................................................................................................................CAGTAAAGCATTTGACTCAGTACATCAA................................................................................................................................................28200.102200000
....................................................................................................................................................ACGGACTTCAGTAAAGCATTTG..............................................................................................................................................................22200.051100000
........................................................................................................................................................................TGACTCAGTACATCATTACATA------------CTAAT.........................................................................................................................27200.051100000
.................................................................................................................................................TATACGGACTTCAGTAAAGCATT................................................................................................................................................................23200.051100000
................................................................................................................................................................................................................................TAGGATTTTCACCCAGTCTTGTC.................................................................................23200.051100000
.......................................................................................................................................................................................TTACATA------------CTAATTCTTAAGCTTGAACG..........................................................................................................27200.051000010
..........................................................................................................................................................................................................................................................................TAACGGGTAGAACCCAAAGAGTCTTGC...................................27200.051000010
................................................................................................................................................................................................................................................TCTTGTCTCTTGGATTTCATCCTATC..............................................................26200.051000010
.......................................................................................................................................................................................TTACATA------------CTAATTCTTAAGC.................................................................................................................20200.051000010
................................................................................................................................................................................................................................................TCTTGTCTCTTGGATTTCATC...................................................................21200.051010000
...................................................................................................................................................................................................................................................................TCCTATTTAACGGGTAGAACC................................................21200.051000010
............................................................................................................................................................................TCAGTACATCATTACATA------------CTAATTC.......................................................................................................................25200.051100000
..................................................................................................................................................................................................................................................................................................................GTCTAAACTTATCTTTGTT...19200.051100000
droVir3
TTCTCAAAAAGTTTTGAAAATAAT-T--------TTG-------------------------------AAACTAAGAAGACGGTAAC--CAAACT--------------A----CT-------TTCATACAAACTGATGTC-ATTTACACTGACTTCAGTAAGGCGTTTGATTCTGTGCACCATGACATT------------TTACTTTTTAAACTTGACCGAATAGGTTTCCCTCTGTCCCTTTTACTTTGGATTAATTCTTATTTAAAAGGTAGGACCCAAAGAGTAATACTGAGGTTGACTACCTCTAAAAGGGTTCACGTTACTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................................................................................................................................................................................................................................................................................CAAAGAGTAATACTGAGGTTGACTACC.....................27205.351070000000000001900000000000004800020100000027000000100000000000000000
.................................................................................................................................................................................................................TTAAACTTGACCGAATAGGTTTCCC..............................................................................................25201.703400010000000000000000000000000000000180006000000000000000000000000
........................................................................................................................................................................................................................................................................................CAAAGAGTAATACTGAGGTTGACTA.......................25201.65330060000000000000000000000000000819000000000000000000000000000000
........................................................................................................................................................................................................................................................................................CAAAGAGTAATACTGAGGTTGACTAC......................26201.4529000000000000900000004007000090000000000000000000000000000000000
.................................................................................................................................................................................................................TTAAACTTGACCGAATAGGTTTC................................................................................................23200.9519000000800000000000000000000020000000009000000000000000000000000
............................................................................................................................................................................................................................................................................AAAGGTAGGACCCAAAGAGTAATAC...................................25200.75150000000015000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................TTAAACTTGACCGAATAGGTTTCCCT.............................................................................................26200.75150000000000000000000000000150000000000000000000000000000000000000
.................................................................................................................................................................................................................TTAAACTTGACCGAATAGGTTTCCCTC............................................................................................27200.7014000800000000000000000000000000000000600000000000000000000000000
........................................................................................................................................................................................................................................................................................CAAAGAGTAATACTGAGGTTGA..........................22200.7014000001000000000000001000006006000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................CAAAGAGTAATACTGAGGTTG...........................21200.6012003000000010000000000000000000004100020000000000000000000001000
.................................................................................................................................................................................................................................................................................TAGGACCCAAAGAGTAATACTGAGGT.............................26200.55110000000011000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................CAAAGAGTAATACTGAGGTTGACTACCC....................28200.55110001000000000000000000000010000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................CAAAGAGTAATACTGAGGTTGACT........................24200.5511000300000000000000002000500000100000000000000000000000000000000
.................................................................................................................................................................................................................TTAAACTTGACCGAATAGGT...................................................................................................20200.408000000000000000000000007000000000000000000000000000000000000010
..............................................................................................................................................................................................................................................................TTAATTCTTATTTAAAAGGTAGGACC................................................26200.357005000000000000000000000200000000000000000000000000000000000000
...............................................................................................................................................TTTACACTGACTTCAGTAAGG....................................................................................................................................................................21200.357007000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................TTTGATTCTGTGCACCATGACA............................................................................................................................................2230.331000000001000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................GATTCTGTGCACCATGACATT------------TTACT.........................................................................................................................2630.331000000000000000000000000001000000000000000000000000000000000000
...............................................................................................................................................TTTACACTGACTTCAGTAAGGCGTTTG..............................................................................................................................................................27200.306000000000000000000000000000000000001005000000000000000000000000
........................................................................................................................................................................................................................................................TTTGGATTAATTCTTATTTAAAAGG.......................................................25200.306000000000000000000000000000000000005001000000000000000000000000
.....................................................................................................................................................CTGACTTCAGTAAGGCGTTTGATTCT.........................................................................................................................................................2640.251000000000000000000000000000000000000100000000000000000000000000
........................................................................................................................................................................................................................................................................................CAAAGAGTAATACTGAGGTTGACTAT......................26200.255000000000000000000000000000000000005000000000000000000000000000
...............................................................................................................................................TTTACACTGACTTCAGTAAGGCG..................................................................................................................................................................23200.255000000000000000000000000000000300100010000000000000000000000000
........................................................................................................................................................................................................................................................................................CAAAGAGTAATACTGAGGTTGAC.........................23200.255000101001000000000000000000000000000000100000000000000000000010
...............................................................................................................................................TTTACACTGACTTCAGTAAGGCGTTTGA.............................................................................................................................................................28200.255000000000000000000000000000000000000005000000000000000000000000
......................................................................................................................................................TGACTTCAGTAAGGCGTTTGATTCT.........................................................................................................................................................2540.251000000000000000000000000100000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................AAAAGGTAGGACCCAAAGAGTAATAC...................................26200.255000000005000000000000000000000000000000000000000000000000000000
.................................................................................................................................................TACACTGACTTCAGTAAGGCGTTT...............................................................................................................................................................24200.255000000000000000000000000000200000001020000000000000000000000000
........................................................................................................................................................................................................................................................................................CAAAGAGTAATACTGAGGT.............................19200.204000000100000000000000000000300000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................CAAAGAGTAATACTGAGG..............................18200.204000000000000000000000000100001000020000000000000000000000000000
........................................................................................................................................................................................................................................................................................CAAAGAGTAATACTGAGGTT............................20200.204000000300000000000000000000010000000000000000000000000000000000
......................................................................................................................................................................................................................CTTGACCGAATAGGTTTCCCTCTGTCCC......................................................................................28200.153000000000000000000000000030000000000000000000000000000000000000
......................................................................................................................................................................................................................CTTGACCGAATAGGTTTCCCTCT...........................................................................................23200.153000000000000000100000000000000000002000000000000000000000000000
.................................................................................................................................................TACACTGACTTCAGTAAGGCG..................................................................................................................................................................21200.153000000000000000000000000000000000000003000000000000000000000000
.......................................................................................................................................................................................................................TTGACCGAATAGGTTTCCCTC............................................................................................21200.153003000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................CTTGACCGAATAGGTTTCCCTCTGTCCCT.....................................................................................29200.153000000000000000000000000000000000000000000000000000000000000003
..................................................................................................................................................................................................................TAAACTTGACCGAATAGGTTTCC...............................................................................................23200.153003000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................TACACTGACTTCAGTAAGGCGT.................................................................................................................................................................22200.153000010000100000000000000000000000000001000000000000000000000000
.........................................................................................................................................................................................................................................................................................AAAGAGTAATACTGAGGTTGACTACC.....................26200.102000000000000000000000000001000000001000000000000000000000000000
..................................................................................................................................................ACACTGACTTCAGTAAGGCGTTTG..............................................................................................................................................................24200.102002000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................TCCCTCTGTCCCTTTTACTTTGGATT........................................................................26200.102002000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................TTACACTGACTTCAGTAAGGCGTT................................................................................................................................................................24200.102000000000000000000000000000000000000002000000000000000000000000
.................................................................................................................................................................................................................TTAAACTTGACCGAATAGGTTTCC...............................................................................................24200.102000000000000000000000000000010000001000000000000000000000000000
......................................................................................................................................................................................................................CTTGACCGAATAGGTTTCCCTCTGTC........................................................................................26200.102000001000000000000000000000010000000000000000000000000000000000
...............................................................................................................................................TTTACACTGACTTCAGTAAGGCGTTT...............................................................................................................................................................26200.102000000000000010000000000000000000000000000000000000000000000010
..................................................................................................................................................................................................................................................................................................TACTGAGGTTGACTACCTCTAAAAGGGT..........28200.102000000000000000000000000000100000001000000000000000000000000000
..............................................................................................................................................ATTTACACTGACTTCAGTAAGGCGT.................................................................................................................................................................25200.102000000000000000000000000002000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................TTAATTCTTATTTAAAAGGTAGG...................................................23200.102002000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................CACTGACTTCAGTAAGGCGTTT...............................................................................................................................................................22200.102000000000000000000000000000100000000000100000000000000000000000
............................................................................................................................................................................................................................................................................AAAGGTAGGACCCAAAGAGTAATACT..................................26200.102000000000000200000000000000000000000000000000000000000000000000
...............................................................................................................................................TTTACACTGACTTCAGTAAGGCGTTA...............................................................................................................................................................26200.102000000000000000000000000000000000000002000000000000000000000000
.....................................................................................................................................................CTGACTTCAGTAAGGCGTTT...............................................................................................................................................................20200.102001000000000000000000000001000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................CTAAAAGGGTTCACGTTACT20200.102000000002000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................CAAAGAGTAATACTGAGGTTGACTACCTC...................29200.102000000000000000000000000000000000020000000000000000000000000000
....................................................................................................................................................................................................................................................................................................CTGAGGTTGACTACCTCTAAAAGGGTT.........27200.102000000200000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................TGACCGAATAGGTTTCCCTCTGTCCCTTT...................................................................................29200.102000000000000000000000000000000000000000000000000000000000000002
........................................................................................................................................................................................................................................................................................CAAAGAGTAATACTGAGGTTGACTG.......................25200.102000000000000000000000000000200000000000000000000000000000000000
......................................................................................................................................................................................................................CTTGACCGAATAGGTTTCCCTCTGTCC.......................................................................................27200.102000000000000000000000000100001000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................ATTTAAAAGGTAGGACC................................................17200.051000000000000000000000000000000000000000000000001000000000000000
....................................................................................................................................................................................................................................................................................GACCCAAAGAGTAATACTG.................................19200.051000000000000000000000000000000000100000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................TTGACTACCTCTAAAAGGGTTCACGT....26200.051000000000000000000000000000000000000010000000000000000000000000
....................................................................................................................................................................................................................AACTTGACCGAATAGGTTTCCCTCTGT.........................................................................................27200.051000000000000000000000000001000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................CAAAGAGTAATACTGAGGTTC...........................21200.051000000000000000000001000000000000000000000000000000000000000000
............................................................................................................................................................................TCTGTGCACCATGACATT------------TTACTTTT......................................................................................................................26200.051000000000000000000000000000010000000000000000000000000000000000
........................................................................................................................................................................................................................................................................TTTAAAAGGTAGGACCCAAAGAG.........................................23200.051000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................CTTGACCGAATAGGTTTCCCTCTGT.........................................................................................25200.051000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................................................................GACCGAATAGGTTTCCCTCTGTCCC......................................................................................25200.051001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................TAAAAGGTAGGACCCAAAGAGT........................................22200.051000000000000000000000000001000000000000000000000000000000000000
....................................................................................................................................................................................................................AACTTGACCGAATAGGTTTCC...............................................................................................21200.051000000000000000000000000000000000000000000000000000000000000001
........................................................................................................................................................................................................................................................TTTGGATTAATTCTTATTTAAAAGGTAGGACCC...............................................33200.051000000000000000000000000000000000000000000010000000000000000000
.......................................................................................................................................................GACTTCAGTAAGGCGTTTGA.............................................................................................................................................................20200.051000000000000000000000000000010000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................TAAAAGGGTTCACGTTACT19200.051000000001000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................CTTGACCGAATAGGTTTCCCTCTG..........................................................................................24200.051000000000000000000000000000000000000000000000000000000000000001
...............................................................................................................................................TTTACACTGACTTCAGTAA......................................................................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................TCTTATTTAAAAGGTAGGACC................................................21200.051000000000000000000000000001000000000000000000000000000000000000
...........................................................................................................................................................................................................................................CTGTCCCTTTTACTTTGGATT........................................................................21200.051000000000000000000000000010000000000000000000000000000000000000
...............................................................................................................................................................................................................................ATAGGTTTCCCTCTGTCCCTTT...................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................TTTTAAACTTGACCGAATAGGTT..................................................................................................23200.051000000000000000000000000000000001000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................GTTGACTACCTCTAAAAGGGT..........21200.051000000001000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................TTTAAACTTGACCGAATAGGTTTCCCT.............................................................................................27200.051001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................AATACTGAGGTTGACTAC......................18200.051000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................TCTGTGCACCATGACATT------------TTACT.........................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................ACACTGACTTCAGTAAGGCG..................................................................................................................................................................20200.051000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................................ACTTGACCGAATAGGTTTCCCTCTGTCC.......................................................................................28200.051000000000000000000000000000000001000000000000000000000000000000
..............................................................................................................................................................................................................................................................TTAATTCTTATTTAAAAGGTAGGACCCA..............................................28200.051000000000000000000000000000000000000010000000000000000000000000
..........................................................................................................................................................................................................................................................................................AAGAGTAATACTGAGGTTGACTA.......................23200.051000000000000000000000000001000000000000000000000000000000000000
....................................................................................................................................................ACTGACTTCAGTAAGGCGTT................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................TAAAAGGGTTCACGTTAC.18200.051000000000000000000000000100000000000000000000000000000000000000
.........................................................................................................................................................................................................................................CTCTGTCCCTTTTACTTTGGATTAAT.....................................................................26200.051000000000000000000000000100000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................CAAAGAGTAATACTGAGGTTGACTC.......................25200.051000010000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................TTTTTAAACTTGACCGAATAGGTTTCCCT.............................................................................................29200.051001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................TTACTTTTTAAACTTGACCGAATAGG....................................................................................................26200.051000000000000000000000000000000010000000000000000000000000000000
...........................................................................................................................................................................................................................CCGAATAGGTTTCCCTCTGTCC.......................................................................................22200.051000000000000000000000000000000000000010000000000000000000000000
.....................................................................................................................................................................................................................ACTTGACCGAATAGGTTTCCCTC............................................................................................23200.051000000000000000000000000001000000000000000000000000000000000000
.....................................................................................................................................................................................................................ACTTGACCGAATAGGTTTCCCTCTGTC........................................................................................27200.051000000000000000000000000100000000000000000000000000000000000000
.................................................................................................................................................................................GCACCATGACATT------------TTACTTTTTAA...................................................................................................................24200.051000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................TACACTGACTTCAGTAAGG....................................................................................................................................................................19200.051000000000000000000000000100000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................TAGGACCCAAAGAGTAATACTGAGGTT............................27200.051000000010000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................AAAGAGTAATACTGAGGTTGACT........................23200.051001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................TGACTACCTCTAAAAGGGTTCACGTT...26200.051000000000000000000000000100000000000000000000000000000000000000
.......................................................................................................................................................................................................................TTGACCGAATAGGTTTCCCTCTGT.........................................................................................24200.051000000000000000000000000001000000000000000000000000000000000000
........................................................................................................................................................................................................................................................TTTGGATTAATTCTTATTTAAAAG........................................................24200.051000000000000000000000000100000000000000000000000000000000000000
............................................................................................................................................................................................................ACTTTTTAAACTTGACCGAATAGGTT..................................................................................................26200.051000000000000000000000000000000001000000000000000000000000000000
..................................................................................................................................................................................................................TAAACTTGACCGAATAGGTTTCCCT.............................................................................................25200.051000000000000000000000000010000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................TAATTCTTATTTAAAAGGTAGGACCC...............................................26200.051000000000000000000000000000000000000100000000000000000000000000
..............................................................................................................................................................................................................................................................................................GTAATACTGAGGTTGACTA.......................19200.051000001000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................GTC-ATTTACACTGACTTCAGTAAGGCG..................................................................................................................................................................27200.051000000000000000000000000010000000000000000000000000000000000000
...............................................................................................................................................TTTACACTGACTTCAGTAAGGCGTT................................................................................................................................................................25200.051000000000000010000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................CCCAAAGAGTAATACTGAGGTTGAC.........................25200.051000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................................................................................................................................................TAAAAGGTAGGACCCAAAGA..........................................20200.051001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................AACTTGACCGAATAGGTTTCCCTCTG..........................................................................................26200.051000000000000000000000000000000001000000000000000000000000000000
...............................................................................................................................................................................................................................................................TAATTCTTATTTAAAAGGTAG....................................................21200.051001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................TAGGTTTCCCTCTGTCCCTTTTACT...............................................................................25200.051001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................ACTTGACCGAATAGGTTTCCCTCTTA.........................................................................................26200.051000000000000000000000000100000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................AGAGTAATACTGAGGTTGACTACCTCTAA................29200.051000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................................................TGTGCACCATGACATT------------TTACT.........................................................................................................................21200.051000000000000000000000000010000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................GACCCAAAGAGTAATACTGAGGTT............................24200.051000000001000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................GACCCAAAGAGTAATACTGAGGTTGA..........................26200.051000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................................................................................................................................................................TGGATTAATTCTTATTTAAAAGGT......................................................24200.051001000000000000000000000000000000000000000000000000000000000000
droGri2
------------------------------------------------------------------------------------------------------------------------------------------GTC-GTTTATACAGACTTCAGTAAGGCCTTTGATTTTGTTAACCATTGTCTC------------CTTCTCAATAAACTAAACCTTATAAGATTTCC---TAACCTTCTTGCATGGATTTCTGAGTATCTGAGTAACAGATCTCAAAAAGTTGTTTTGAAAACATTAATTTCTAAACCTATCCTAGTTATCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
AAAAAAA----------AA----AATA-----------------------------------------------AGAAC-----------------------------ACGATATA-------ATCCAACATTTAATTTAT-ATTTATACTGACTTTAGTAAGGCTTTCGATACGGTTGATCATTCTATG------------CTTCTCGCGAAACTTAACATAATGGGTTTTTCCCCAAAACTGTTGGCTTGGTTAAAGTCGTATCTTATTGGCAGAACCCAAAAGGTGTCTTTTCGTTCCTCGATATCTAAAACTGTTCGAGTTACGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................................................................................................................................................................................................................................................................................................TCGTTCCTCGATATCTAAAACTGT..........24200.15303000
............................................................................................................................................T-ATTTATACTGACTTTAGTAAGGCTT.................................................................................................................................................................26200.10202000
...........................................................................................................................................................................................................................................................................................AAGGTGTCTTTTCGTTCCTCG........................21200.10202000
.......................................................................................................................................................GACTTTAGTAAGGCTTTCGATACGGT.......................................................................................................................................................26200.05100001
....................................................................................................................................................................CTTTCGATACGGTTGATCATT...............................................................................................................................................21200.05110000
............................................................................................................................................................................ACGGTTGATCATTCTATG------------CTTC..........................................................................................................................22200.05100010
...........................................................................................................................................................TTAGTAAGGCTTTCGATACGGTTGATC..................................................................................................................................................27200.05100010
................................................................................................................................................................AAGGCTTTCGATACGGTTGATC..................................................................................................................................................22200.05100010
...........................................................................................................................................................................................................................................................................TATTGGCAGAACCCAAAAGGT........................................21200.05100100
...................................................................................................................................................................................ATCATTCTATG------------CTTCTCGCG.....................................................................................................................20200.05101000
.....................................................................................................................................................................................................................................................................................................TTCGTTCCTCGATATCTAAAACTGTTC........27200.05101000
....................................................................................................................................................................................................................................TTTTTCCCCAAAACTGTTGGCT..............................................................................22200.05110000
............................................................................................................................................................................................................................................CAAAACTGTTGGCTTGGTTAA.......................................................................21200.05101000
......................................................................................................................................................................................ATTCTATG------------CTTCTCGCGAAACTTAACA...........................................................................................................27200.05101000
..............................................................................................................................................................GTAAGGCTTTCGATACGGT.......................................................................................................................................................19200.05100010
.........................................................................................................................................................................................................................................................TTGGTTAAAGTCGTATCTTATTGGCAG....................................................27200.05100010
......................................................................................................................................................TGACTTTAGTAAGGCTTTCGA.............................................................................................................................................................21200.05100010
.........................................................................................................................................................................................................................................................................CTTATTGGCAGAACCCAAAAGGTGTCTT...................................28200.05100010
.....................................................................................................................................................................................................................................................................GTATCTTATTGGCAGAACC................................................19200.05110000
.........................................................................................................................................................................................................................................................................CTTATTGGCAGAACCCAAAAGGTGTCT....................................27200.05100010
......................................................................................................................................................................................................................................TTTCCCCAAAACTGTTGGCTTGGTT.........................................................................25200.05101000
dp5
AGAGACA----------AA----CCTT----------TAC------------------------AAACATAAAAGCAACACCACACCCTGGAGGCACAGCCCAAAGGGCTCAAATT-------GGTTTGCAGACGACAGTA-GTTTTTACGGACTTCAGCAAGGCATTCGATTCTGTGAACCATGCTCTG------------CGTATTCACAAGCTCTCTTTATTAGGGTTCCCAACGCATCTTCTAGATCTGATTTTGTCCTATCTCTCTAACCGTACTCAACGTGTTTTGTTTTCTAACGTGTTGTCAAATACTGTTAATGTTACTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................................................................................TACGGACTTCAGCAAGGCATTCGA.............................................................................................................................................................24207.50150000000096531
...................................................................................................................................................TACGGACTTCAGCAAGGCATTCG..............................................................................................................................................................23203.7575050000059110
...........................................................................................................................................TA-GTTTTTACGGACTTCAGCAAGGCAT.................................................................................................................................................................27141.932700000007200
...........................................................................................................................................TA-GTTTTTACGGACTTCAGCAAGGC...................................................................................................................................................................25151.271900000003160
..................................................................................................................................................TTACGGACTTCAGCAAGGCATTCG..............................................................................................................................................................24201.252502000001760
..................................................................................................................................................TTACGGACTTCAGCAAGGCATTCGA.............................................................................................................................................................25201.102202000009110
.............................................................................................................................................................................CTGTGAACCATGCTCTG------------CGTATTC.......................................................................................................................2421.0020200000000
.............................................................................................................................................................................CTGTGAACCATGCTCTG------------CGTA..........................................................................................................................2121.0020000000200
......................................................................................................................................................................TTCGATTCTGTGAACCATGCTCTG------------CG............................................................................................................................2611.0010000000010
.............................................................................................................................................................................CTGTGAACCATGCTCTG------------CGTATTCA......................................................................................................................2521.0020200000000
.......................................................................................................................................................................TCGATTCTGTGAACCATGCTCTG------------CGT...........................................................................................................................2611.0010000001000
...................................................................................................................................................TACGGACTTCAGCAAGGCATTCGATTC..........................................................................................................................................................27200.90180100000980
....................................................................................................................................................ACGGACTTCAGCAAGGCATTCGA.............................................................................................................................................................23200.751501000001310
..............................................................................................................................................................................................................................................................................TAACCGTACTCAACGTGTTTTGT...................................23200.601201020000000
...................................................................................................................................................TACGGACTTCAGCAAGGCATTCGAT............................................................................................................................................................25200.551100000001100
.............................................................................................................................................................................................................................TATTAGGGTTCCCAACGCATCTTC...................................................................................2420.5010000001000
.............................................................................................................................................................................................................................TATTAGGGTTCCCAACGCATCTT....................................................................................2320.5010100000000
...........................................................................................................................................................TCAGCAAGGCATTCGATTCTGTGAACC..................................................................................................................................................27200.4590500000040
...........................................................................................................................................................TCAGCAAGGCATTCGATTCTGTGAAC...................................................................................................................................................26200.4080300000410
...........................................................................................................................................TA-GTTTTTACGGACTTCAGCAAGGCA..................................................................................................................................................................26150.4060100000140
...............................................................................................................................................TTTTTACGGACTTCAGCAAGGC...................................................................................................................................................................22200.4080000000800
......................................................................................................................................................................TTCGATTCTGTGAACCATGCTCT...........................................................................................................................................23200.3570500001100
...................................................................................................................................................TACGGACTTCAGCAAGGCATTCGATT...........................................................................................................................................................26200.3060100000410
......................................................................................................................................................................TTCGATTCTGTGAACCATGC..............................................................................................................................................20200.3060400000200
............................................................................................................................................................................................................TATTCACAAGCTCTCTTTATTAGGG...................................................................................................25200.3060600000000
...............................................................................................................................................TTTTTACGGACTTCAGCAAGGCAT.................................................................................................................................................................24200.3060100000410
............................................................................................................................................................................................................TATTCACAAGCTCTCTTTATTAGG....................................................................................................24200.3060400200000
...............................................................................................................................................TTTTTACGGACTTCAGCAAGGCATTC...............................................................................................................................................................26190.2650000000410
................................................................................................................................................TTTTACGGACTTCAGCAAGGC...................................................................................................................................................................21200.2550200000021
................................................................................................................................................TTTTACGGACTTCAGCAAGGCATTCGA.............................................................................................................................................................27200.2550100000040
.........................................................................................................................................................................GATTCTGTGAACCATGCTCTG------------C.............................................................................................................................22200.2550200000030
..............................................................................................................................................................................................................................................................................TAACCGTACTCAACGTGTTTTG....................................22200.2550500000000
..............................................................................................................................................................................................................................................................................................................TGTTGTCAAATACTGTTAATGTTACT26200.2550000000140
.......................................................................................................................................................................TCGATTCTGTGAACCATGCTCTG------------..............................................................................................................................23200.2550300000200
..............................................................................................................................................................................................................................................................TTTTGTCCTATCTCTCTAACCG....................................................22200.2550010000400
......................................................................................................................................................................TTCGATTCTGTGAACCATGCTCTG------------..............................................................................................................................24200.2550300100010
...........................................................................................................................................................TCAGCAAGGCATTCGATTCTGTGAACCA.................................................................................................................................................28200.2550500000000
...........................................................................................................................................TA-GTTTTTACGGACTTCAGCAAG.....................................................................................................................................................................23180.2240100000300
..............................................................................................................................................................................................................................................................................................................TGTTGTCAAATACTGTTAATGT....22200.2040000000400
........................................................................................................................................................................CGATTCTGTGAACCATGCTCT...........................................................................................................................................21200.2041300000000
..............................................................................................................................................................................................................................................................................TAACCGTACTCAACGTGTTTTGTTT.................................25200.2040310000000
.................................................................................................................................................................AGGCATTCGATTCTGTGAACCATGC..............................................................................................................................................25200.2040000000400
...................................................................................................................................................................................................................................................................TCCTATCTCTCTAACCGTACTCAACG...........................................26200.2040300000010
......................................................................................................................................................................TTCGATTCTGTGAACCATGCTC............................................................................................................................................22200.2040200000110
........................................................................................................................................................................................................................................................................................................CTAACGTGTTGTCAAATACTGTTAA.......25200.1530000000030
....................................................................................................................................................................................................................................................................................TACTCAACGTGTTTTGTTTTCTAACG..........................26200.1530300000000
......................................................................................................................................................................TTCGATTCTGTGAACCATGCT.............................................................................................................................................21200.1530201000000
............................................................................................................................................................................................................TATTCACAAGCTCTCTTTATTAGGGT..................................................................................................26200.1530300000000
.................................................................................................................................................................................................................................................................TGTCCTATCTCTCTAACCGTACTC...............................................24200.1530300000000
...................................................................................................................................................TACGGACTTCAGCAAGGCAT.................................................................................................................................................................20200.1530000000120
.......................................................................................................................................................................................................................................................................................................TCTAACGTGTTGTCAAATACTGTTGT.......26200.1530000000300
.....................................................................................................................................................................ATTCGATTCTGTGAACCATGC..............................................................................................................................................21200.1530200000001
.................................................................................................................................................TTTACGGACTTCAGCAAGGCATTCGA.............................................................................................................................................................26200.1530000000120
..................................................................................................................................................TTACGGACTTCAGCAAGGCATTC...............................................................................................................................................................23200.1530000000120
..............................................................................................................................................................................................................................................................................TAACCGTACTCAACGTGTTTTGTTTTC...............................27200.1530010000200
...................................................................................................................................................TACGGACTTCAGCAAGGCATTGA..............................................................................................................................................................23200.1530000000300
....................................................................................................................................................................................................................................................................................................TTTTCTAACGTGTTGTCAAATACTG...........25200.1530000000030
..............................................................................................................................................GTTTTTACGGACTTCAGCAAGGC...................................................................................................................................................................23170.1220000000011
...........................................................................................................................................TA-GTTTTTACGGACTTCAGC........................................................................................................................................................................20180.1120000000200
......................................................................................................................................................................................................................................................................................................TTCTAACGTGTTGTCAAATACTGTTG........26180.1120000000020
...............................................................................................................................................TTTTTACGGACTTCAGCAAGGCATTCGA.............................................................................................................................................................28190.1120000000020
....................................................................................................................................................ACGGACTTCAGCAAGGCATTCGATT...........................................................................................................................................................25200.1020000000200
..........................................................................................................................................................TTCAGCAAGGCATTCGATTCTG........................................................................................................................................................22200.1020000000110
..........................................................................................................................................................................................................................................................................TCTCTAACCGTACTCAACGTGT........................................22200.1020200000000
...................................................................................................................................................................................................................................................................TCCTATCTCTCTAACCGTACTCAACGTG.........................................28200.1020200000000
............................................................................................................................................................CAGCAAGGCATTCGATTCTG........................................................................................................................................................20200.1020100000001
..............................................................................................................................................................................................................................................................................................................TGTTGTCAAATACTGTTAATGTTAC.25200.1020000000020
.............................................................................................................................................................................................................................................................................................TGTTTTGTTTTCTAACGTGTTGTCAAA................27200.1020000000110
................................................................................................................................................TTTTACGGACTTCAGCAAGG....................................................................................................................................................................20200.1020200000000
....................................................................................................................................................................CATTCGATTCTGTGAACCATGCT.............................................................................................................................................23200.1020000000200
...............................................................................................................................................................................................................................................................................................TTTTGTTTTCTAACGTGTTG.....................20200.1020000000020
..................................................................................................................................................TTACGGACTTCAGCAAGGCATT................................................................................................................................................................22200.1020200000000
.................................................................................................................................................................................................................................................................TGTCCTATCTCTCTAACCGTACTCAA.............................................26200.1020200000000
.................................................................................................................................................TTTACGGACTTCAGCAAGG....................................................................................................................................................................19200.1020000000020
....................................................................................................................................................................................................................AGCTCTCTTTATTAGGGTTCCCA.............................................................................................23200.1020000000200
.............................................................................................................................................................................................................................................................................................................GTGTTGTCAAATACTGTTAA.......20200.1020000000020
..........................................................................................................................................................................................................................................................................TCTCTAACCGTACTCAACGTGTT.......................................23200.1020200000000
.....................................................................................................................................................CGGACTTCAGCAAGGCATTCGA.............................................................................................................................................................22200.1020000000110
...............................................................................................................................................................CAAGGCATTCGATTCTGTGAACC..................................................................................................................................................23200.1020000000200
...........................................................................................................................................................................TTCTGTGAACCATGCTCTG------------C.............................................................................................................................20200.1020000100001
.............................................................................................................................................................AGCAAGGCATTCGATTCTGTG......................................................................................................................................................21200.1020000000020
..................................................................................................................................................................................................................................................................................................TGTTTTCTAACGTGTTGTCAAATAC.............25200.1020000000020
...................................................................................................................................................................................................................................................................TCCTATCTCTCTAACCGTACTCAACGTGT........................................29200.1020200000000
.......................................................................................................................................................................TCGATTCTGTGAACCATGCTC............................................................................................................................................21200.1020110000000
.................................................................................................................................................................................................................................................................................................TTGTTTTCTAACGTGTTG.....................18200.1020000000200
..........................................................................................................................................................................ATTCTGTGAACCATGCTCTG------------C.............................................................................................................................21200.1020000000002
.......................................................................................................................................................................TCGATTCTGTGAACCATGCT.............................................................................................................................................20200.1020100000100
..................................................................................................................................................TTACGGACTTCAGCAAGGC...................................................................................................................................................................19200.1020000000020
..............................................................................................................................................................................................................TTCACAAGCTCTCTTTATTAGGG...................................................................................................23200.1020200000000
.......................................................................................................................................................................................................................................................................................................TCTAACGTGTTGTCAAATACTG...........22200.1020200000000
.....................................................................................................................................................CGGACTTCAGCAAGGCATTC...............................................................................................................................................................20200.1020000000020
............................................................................................................................................................CAGCAAGGCATTCGATTCTGT.......................................................................................................................................................21200.1020100000100
.............................................................................................................................................................AGCAAGGCATTCGATTCTGTGAACCA.................................................................................................................................................26200.1020200000000
...........................................................................................................................................TA-GTTTTTACGGACTTCAGCAAGGCATT................................................................................................................................................................28140.0710100000000
............................................................................................................................................A-GTTTTTACGGACTTCAGCAAGGC...................................................................................................................................................................24160.0610000000001
.........................................................................................................................................................................................................................................................................................................TAACGTGTTGTCAAATACTGTTAATGT....27180.0610000000010
...........................................................................................................................................TA-GTTTTTACGGACTTCAGCA.......................................................................................................................................................................21180.0610100000000
...........................................................................................................................................TA-GTTTTTACGGACTTCAGCAAGG....................................................................................................................................................................24180.0610100000000
.............................................................................................................................................................................................................ATTCACAAGCTCTCTTTATTAGG....................................................................................................23200.0510010000000
....................................................................................................................................................................CATTCGATTCTGTGAACCATG...............................................................................................................................................21200.0510100000000
...................................................................................................................................................TACGGACTTCAGCAAGGCATT................................................................................................................................................................21200.0510100000000
................................................................................................................................................................................................................................................................TTGTCCTATCTCTCTAACCGTACT................................................24200.0510100000000
...........................................................................................................................................................TCAGCAAGGCATTCGATTCTGT.......................................................................................................................................................22200.0510100000000
...............................................................................................................................................................CAAGGCATTCGATTCTGTGAACCA.................................................................................................................................................24200.0510100000000
......................................................................................................................................................................................................................................................................TATCTCTCTAACCGTACTCAACGTGT........................................26200.0510100000000
...........................................................................................................................................................TCAGCAAGGCATTCGATTCTGTG......................................................................................................................................................23200.0510100000000
..........................................................................................................................................................TTCAGCAAGGCATTCGATTCTGTG......................................................................................................................................................24200.0510100000000
................................................................................................................................................................................................................................................................................................TTTGTTTTCTAACGTGTTGTCAAATA..............26200.0510000000010
......................................................................................................................................................................TTCGATTCTGTGAACCA.................................................................................................................................................17200.0510000000010
...............................................................................................................................................................................................................................................................TTTGTCCTATCTCTCTAACCGTACTC...............................................26200.0510100000000
.................................................................................................................................................................................................................................................................TGTCCTATCTCTCTAACCGTACTCAACG...........................................28200.0510100000000
...........................................................................................................................................................................................................................................................................................................ACGTGTTGTCAAATACTGTTA........21200.0510000000010
................................................................................................................................................TTTTACGGACTTCAGCAAGGCATTC...............................................................................................................................................................25200.0510000000010
........................................................................................................................................................................................................................................................................TCTCTCTAACCGTACTCAACGTT.........................................23200.0510100000000
............................................................................................................................................................................................................TATTCACAAGCTCTCTTTATTA......................................................................................................22200.0510100000000
.....................................................................................................................................................................................................................................................................CTATCTCTCTAACCGTACTC...............................................20200.0510100000000
........................................................................................................................................................................................................................................................................................................CTAACGTGTTGTCAAATACT............20200.0510000010000
..............................................................................................................................................................................................................................................................................................................TGTTGTCAAATACTGTTAATGTC...23200.0510000000010
.................................................................................................................................................................................................................................................................................................TTGTTTTCTAACGTGTTGTCAAA................23200.0510100000000
............................................................................................................................................................................................................................................................................................................CGTGTTGTCAAATACTGTTAATG.....23200.0510000000010
..............................................................................................................................................................................................................................................................TTTTGTCCTATCTCTCTAACCGTAC.................................................25200.0510000000010
...............................................................................................................................................................................................................................................................TTTGTCCTATCTCTCTAACCGT...................................................22200.0510100000000
...................................................................................................................................................................GCATTCGATTCTGTGAACCATG...............................................................................................................................................22200.0510100000000
......................................................................................................................................................................................................................................................................TATCTCTCTAACCGTACTCAACGTG.........................................25200.0510100000000
..................................................................................................................................................TTACGGACTTCAGCAAGGCATTCGATTC..........................................................................................................................................................28200.0510000000010
.............................................................................................................................................................................................................................................................................................TGTTTTGTTTTCTAACGTGTTGTC...................24200.0510100000000
...................................................................................................................................................TACGGACTTCAGCAAGGCA..................................................................................................................................................................19200.0510100000000
.............................................................................................................................................................................................................................................................ATTTTGTCCTATCTCTCTAACCG....................................................23200.0510100000000
...........................................................................................................................................................................................................................................................................CTCTAACCGTACTCAACGTGT........................................21200.0510100000000
..................................................................................................................................................................................................................................................................GTCCTATCTCTCTAACCGTAC.................................................21200.0510100000000
.................................................................................................................................................................AGGCATTCGATTCTGTGAACCATG...............................................................................................................................................24200.0510100000000
..........................................................................................................................................................TTCAGCAAGGCATTCGATTCTGTGA.....................................................................................................................................................25200.0510100000000
..................................................................................................................................................TTACGGACTTCAGCAAGG....................................................................................................................................................................18200.0510000000010
..................................................................................................................................................................GGCATTCGATTCTGTGAACCATGCTCT...........................................................................................................................................27200.0510100000000
...............................................................................................................................................................................................................................................................TTTGTCCTATCTCTCTAACCG....................................................21200.0510100000000
.............................................................................................................................................................................................................................................................................................TGTTTTGTTTTCTAACGTGTTG.....................22200.0510100000000
...............................................................................................................................................................CAAGGCATTCGATTCTGTGAAC...................................................................................................................................................22200.0510000000010
..........................................................................................................................................................................................................................................................................................................AACGTGTTGTCAAATACTGTTA........22200.0510100000000
.....................................................................................................................................................................ATTCGATTCTGTGAACCATGCTCT...........................................................................................................................................24200.0510100000000
...........................................................................................................................................................................TTCTGTGAACCATGCTCTG------------T.............................................................................................................................20200.0510100000000
......................................................................................................................................................GGACTTCAGCAAGGCATTCGATTCTG........................................................................................................................................................26200.0510100000000
..............................................................................................................................................................................................................TTCACAAGCTCTCTTTATTAGGGT..................................................................................................24200.0510000100000
................................................................................................................................................................................................................................................................................................TTTGTTTTCTAACGTGTTGTC...................21200.0510100000000
.................................................................................................................................................................................................................ACAAGCTCTCTTTATTAGGGT..................................................................................................21200.0510100000000
............................................................................................................................................................................TCTGTGAACCATGCTCTG------------C.............................................................................................................................19200.0510100000000
....................................................................................................................................................................CATTCGATTCTGTGAACCA.................................................................................................................................................19200.0510000000010
................................................................................................................................................................AAGGCATTCGATTCTGTGAAC...................................................................................................................................................21200.0510000000100
..............................................................................................................................................................................................................................................................................................................TGTTGTCAAATACTGTTAATGTTA..24200.0510000000100
..............................................................................................................................................................................................................................................................TTTTGTCCTATCTCTCTAACC.....................................................21200.0510100000000
.................................................................................................................................................................................................................................................................................................................TGTCAAATACTGTTAATGTTACT23200.0510100000000
........................................................................................................................................................................................................................CTCTTTATTAGGGTTCCCAACG..........................................................................................22200.0510100000000
......................................................................................................................................................................................................................................................................................................TTCTAACGTGTTGTCAAATACTGT..........24200.0510100000000
..............................................................................................................................................................................................................................................................................TAACCGTACTCAACGTGTTTTGTTTT................................26200.0510100000000
...........................................................................................................................................................TCAGCAAGGCATTCGATTCTGTGAAA...................................................................................................................................................26200.0510100000000
.................................................................................................................................................................................................................................................................TGTCCTATCTCTCTAACCGTACT................................................23200.0510100000000
...............................................................................................................................................................................................................TCACAAGCTCTCTTTATT.......................................................................................................18200.0510100000000
............................................................................................................................................................................................................TATTCACAAGCTCTCTTTATTAG.....................................................................................................23200.0510100000000
.....................................................................................................................................................................................................................GCTCTCTTTATTAGGGTTCCC..............................................................................................21200.0510100000000
.......................................................................................................................................................................................................................................................................................TCAACGTGTTTTGTTTTCTAACGTGT.......................26200.0510010000000
........................................................................................................................................................................................................................................................................................CAACGTGTTTTGTTTTCTAACG..........................22200.0510100000000
.......................................................................................................................................................GACTTCAGCAAGGCATTCGATTCTG........................................................................................................................................................25200.0510100000000
...................................................................................................................................................................................................................................................................TCCTATCTCTCTAACCGTACTCA..............................................23200.0510100000000
........................................................................................................................................................................CGATTCTGTGAACCATGCTCTG------------C.............................................................................................................................23200.0510000000100
............................................................................................................................................................................................................................................................GATTTTGTCCTATCTCTCTAACCG....................................................24200.0510100000000
.................................................................................................................................................................................................................................................................................................................TGTCAAATACTGTTAATG.....18200.0510000000100
...........................................................................................................................................................TCAGCAAGGCATTCGATTCTGTGA.....................................................................................................................................................24200.0510100000000
........................................................................................................................................................................................................................................................................................................CTAACGTGTTGTCAAATACTG...........21200.0510100000000
..............................................................................................................................................................................................................................................................TTTTGTCCTATCTCTCTAACCGTACTCA..............................................28200.0510100000000
...........................................................................................................................................................TCAGCAAGGCATTCGATTCTG........................................................................................................................................................21200.0510100000000
.........................................................................................................................................................CTTCAGCAAGGCATTCGATTCTGTGA.....................................................................................................................................................26200.0510100000000
...................................................................................................................................................TACGGACTTCAGCAAGGC...................................................................................................................................................................18200.0510000000010
...............................................................................................................................................................................................................TCACAAGCTCTCTTTATTAGGGTTCC...............................................................................................26200.0510100000000
.......................................................................................................................................................................................................................................................................................................TCTAACGTGTTGTCAAATACT............21200.0510100000000
..............................................................................................................................................................................................................................................................................................................TGTTGTCAAATACTGTTAATGTT...23200.0510000000100
.........................................................................................................................................................................GATTCTGTGAACCATGCTC............................................................................................................................................19200.0510100000000
.....................................................................................................................................................................ATTCGATTCTGTGAACCATGCT.............................................................................................................................................22200.0510100000000
.............................................................................................................................................................................................................................................................................................TGTTTTGTTTTCTAACGTGTTGTCA..................25200.0510000000010
.....................................................................................................................................................................................................................................................................CTATCTCTCTAACCGTACTCAACGT..........................................25200.0510010000000
...............................................................................................................................................TTTTTACGGACTTCAGCAAGG....................................................................................................................................................................21200.0510000000001
.....................................................................................................................................................................ATTCGATTCTGTGAACCATG...............................................................................................................................................20200.0510000000010
......................................................................................................................................................................TTCGATTCTGTGAACCATGCTCTG------------C.............................................................................................................................25200.0510100000000
...................................................................................................................................................TACGGACTTCAGCAAGGCATTC...............................................................................................................................................................22200.0510100000000
...................................................................................................................................................................................................................................................................TCCTATCTCTCTAACCGTACT................................................21200.0510100000000
................................................................................................................................................................................................................................................................................................................TTGTCAAATACTGTTAATGTTAC.23200.0510000000100
.................................................................................................................................................................................................................................................................TGTCCTATCTCTCTAACCGTAC.................................................22200.0510100000000
...................................................................................................................................................................................................................................................................TCCTATCTCTCTAACCGTAC.................................................20200.0510100000000
....................................................................................................................................................ACGGACTTCAGCAAGGCATTCGATTC..........................................................................................................................................................26200.0510100000000
.....................................................................................................................................................................ATTCGATTCTGTGAACCATGCTCTG------------C.............................................................................................................................26200.0510100000000
....................................................................................................................................................................................................................AGCTCTCTTTATTAGGGTTCCC..............................................................................................22200.0510100000000
................................................................................................................................................................AAGGCATTCGATTCTGTGAACCATGCTC............................................................................................................................................28200.0510000000010
.....................................................................................................................................................CGGACTTCAGCAAGGCATTCG..............................................................................................................................................................21200.0510000000010
.......................................................................................................................................................................TCGATTCTGTGAACCATGCTCT...........................................................................................................................................22200.0510100000000
....................................................................................................................................................................................................................................................................................................TTTTCTAACGTGTTGTCAAATA..............22200.0510000000010
...............................................................................................................................................................CAAGGCATTCGATTCTGTGAACCATGC..............................................................................................................................................27200.0510000000010
............................................................................................................................................................................................................................................................GATTTTGTCCTATCTCTCTAAAA.....................................................23200.0510100000000
.........................................................................................................................................................................................................................................................................................................TAACGTGTTGTCAAATACTGTTG........23200.0510000000010
.................................................................................................................................................................................................................................................................................................................TGTCAAATACTGTTAATGTTA..21200.0510100000000
droPer2
GCTTAAT----------AA----A-A--------AAAAAAAAAAAAACCTCTTTCATTA----------------------------------------TTAAAGGCTTTCAAGGT-------AACTTACAGACGGATGTT-ATTTACAGCGACTTTAGTAAAGCATTCGACTCTGTAAACCATTCCCTT------------TTAGCACATAAACTTGACCTTTTAGGGTTTGCGCACAACCTCCTGAGATGGACTTCTAGCTATCTCTGTTCTAGGTTTCAAAGATTCCTCTTCGAAAACTCTCTCTCTTTACCATTAAAGGTTTCTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................................................ACTTTAGTAAAGCATTCGACTCTGTAA.....................................................................................................................................................27200.051010000
...................................................................................................................T-------AACTTACAGACGGATGTT-ATTTA.....................................................................................................................................................................................24200.051010000
droAna3
GCTCAAA------------------------GTG------------------TCAGTGACAAACACTTATTT----------------------------TGAGACCGCTCGAATC-------GGTTTAC-------AGTT-ATTTGCAAGCTATGCAGTAAAGCATTTAACTCTGTTAACCGTTCGCTT------------CTTATAATTAAACTCAGTCTTTTGGGATTCCCAACCGATCTTCTTATTTGGATTTCGAGCTACTTATCTGGGAGAACCCAACGTGTTTCTC---------------------------GCTTTTAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................................................................................................................................................................................................................TAAACTCAGTCTTTTGGGATTCCCAAC...........................................................................................27202.70540540000
.....................................................................................................................................................................................................................ACTCAGTCTTTTGGGATTCCCAAC...........................................................................................24200.255050000
........................................................TGACAAACACTTATTT----------------------------TGAGACCGC...........................................................................................................................................................................................................................25200.153300000
........................................................TGACAAACACTTATTT----------------------------TGAGACCGCTC.........................................................................................................................................................................................................................27200.153030000
....................................................................................................................................................................................................................................................................GCTACTTATCTGGGAGAACCCAACGTG.........................................27200.102200000
...........................................................CAAACACTTATTT----------------------------TGAGACCGCTC.........................................................................................................................................................................................................................24200.102020000
..............................................................................................................................TTAC-------AGTT-ATTTGCAAGCTATGCAGT........................................................................................................................................................................26140.071000010
..............................................................................................................................TTAC-------AGTT-ATTTGCAAGCTATGC...........................................................................................................................................................................23150.071010000
...........................................................CAAACACTTATTT----------------------------TGAGACCGCTCGA.......................................................................................................................................................................................................................26200.051010000
...................................................................TATTT----------------------------TGAGACCGCTCGAATC-------GGT..........................................................................................................................................................................................................24200.051001000
...........................................................CAAACACTTATTT----------------------------TGAGACCGCTCGAA......................................................................................................................................................................................................................27200.051100000
..............................................................................................................................................................................................................................................................TTTCGAGCTACTTATCTGGGAG....................................................22200.051000100
.............................................................................................................................................................................................T------------CTTATAATTAAACTCAGTCTTTTGG.....................................................................................................26200.051100000
droBip1
ATAGAGG-----CTTGGAACTTTT-T--------TTAAGA------------------------TTTGTAAGGGAGAACTCTATCC--------------------CTTTTGTAAG-------GGATATCAAACCGATGTA-ATTTACACAGACTTCAGCAAAGCATTTGATTCAGTTAATCACTCACTT------------TTGTTGAGTAAACTGAATATGCTGGGTTTTCCTAAAGACCTCTTAACGTGGATCTCCAGCTACCTAGATGGAAGGACACAAAGAGTCTTATTTAAAAACATACAGTCCCGTCTGGTCCGTGCTACASizeHit CountTotal NormTotal
No Reads
droKik1
ATCTCC----------GTGTCAAC-A--------GTAATA------------------------TTTTAAACGAAGGACATCAG---------------CAAAGGGCTTCAGTTAT-------AACTTCCAGACAGATGTA-ATCTATACTGATTTTAGTAAAGAATTTGACTCACCTAACCATTCTATC------------CTTGTTAGAAAACTCGATATAATGGGATTTCTGGTTGATCTTCCTAGATGGATCTGAAGTTATTTGAAAGACAGGACGCAAAAGGTCCTCTTTAAAAATAGCTTATCTAATGTTCTCAAGGTTACTSizeHit CountTotal NormTotal
No Reads
droFic1
AACGAAT-----CTTTTAA----AGCTCACGTTC------------------TTTGTGA----------------------------------------TAAATGGCTT----------------------------TATC-ATTTACACAGACTTCAGTAAAGCATTTGACTCTGTAAATCACTTCCTA------------CTGATTCGCAAACTTGACATGATAGGGTTTCCAGCTGATCTTTTAAGTTGGATCTTTAGTTATCTCAGTGGCCGAACGCAAAGAGTCCTTTTCAAAAATTCCTTAAGTAGTCTCCTCAGAGTTACCSizeHit CountTotal NormTotal
No Reads
droEle1
TATAG----------------------------------------------------------------------------------------------TTAAGGGATTTAATAAT-------AAAATGCAGACTGATGTTATTATATACAGATTTTAATAAAGCTTTTGATTCTGTAAACCATTCTCTT------------CTTTTCGTTAAATTAGATCAGCTCGA-TTTTCAAATAATCTTTTAACTTGGATTTCAAGTTATTTGAACGGAAGAACTCAGAGGGTTATTTTTAAAAATGCAGATTCCAATATGATTAACATAACASizeHit CountTotal NormTotal
No Reads
droRho1
ACCTTC----------TAG----AGCTCACTACA------------------TTAGTGA----------------------------------------TAAAAGGCTTCAATAGT-------AGTTTTCAAACAGACGTC-ATTTACACTGACTTTAGTAAAGCATTTGACTCTGTAAATCACTTACGT------------CTTATTCAAAAACTTGACCTGTTAGGTTTTTCAATTGATCTGCTTAAATGGATATCAAGTTATCTGAATGGCAGGTCACAAAGGGTCCTTTTTAAAAATTCAATTTCTGAAATTCTCCGCGTTATCSizeHit CountTotal NormTotal
No Reads
droBia1
GAGCTAA----------------G-C--------TAGAAA------------------------CATTAAAACAAGCAGACGT-----TAAAGGT--------------ATTT--GAATTCTTAATCCTCCACCTCTTATT-ATTAATCCCAATTGCCTTGTAGTAGATAAAGCAATAATTTTTTTTAGATCAAATTCAAAATTAGCTCCTAATCCAG-CTATAAATGGTTTCCTGGTAATCTATTATCTTGGATTTCATGTTACTTAAATGGTAGGACTCAGAGAGTTATATTCAAGAATGCTGTTTCAAAATTGATCTACGTGACASizeHit CountTotal NormTotal
No Reads
droTak1
TTCCCTT----------AA----CATTGA---------TA------------------------T-------------------------------------------TCCTGACA-------CATCATCAAACTGATGTG-ATTTATACTGATTTTTCTAAAGCTTTTGATTCTGTGAACCATAAACTT------------CTTATTTTTAAATTGTCCCGTTTAGGGTTTCCTCCAAACCTACTTGACTGGATACTTTCCTACCTCTCTTTTAGAACTCAAATGGTCTGTTTTAACAATAGAATTTCCAAAATAATTAATGTTACTSizeHit CountTotal NormTotal
No Reads
droEug1
AA--------------------------------------------------------------------------------------------------------------------------GTCTTCAGACAGATGTC-ATCTACACTGACTTTAGTAAAGCATTTGACTCTGTAAATCACTCACTT-------------TAGTTCATAAACTTGACTTAATCGGATTCCCATGCGATCTTCTTAAGTGGGTTGAAAGTTATCTGACTGGTAGAACGCAACGTGTTTTATTTAAAGATGTCTTGTCTGGTCCGATTTATGCTTCASizeHit CountTotal NormTotal
No Reads
dm3
ATGATTT-----------------------------------------------------------TCTTACGTA----------------------------------GTATTAT-------AATCTTCAAACAGATGTT-GTCTACACTAACTTTAGTAAAGCATTTGACTCTGTTAATCATTCATTT------------CTAGTAAGGAAACTTGATCTTTTAGGTTTCCCTGTTGATCTTCTAAATTGGATTTCAAGCTATTTGAATGGCAGGACACAACAAGTCCTCTTTAAAAATTCTTTATCTTGTATTCTCCGAGTCACASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................................................................................................................................................................................................................................................................TTATCTTGTATTCTCCGAGTCACA242024.85497000000100000000000000001000000000000001000001000057020000220000000000000000000000000000000000000000000000000000000000000000000000000000000051240001500000700000000000000000000000000000000001800000060000000200001000000000000082115185100000000000000000000000000000000000000000000000000000000000010000030010000001601000000000000000360000000
.........................................................................................................................................................................................................................................................TTGGATTTCAAGCTATTTGAATGGCA.....................................................26517.20860000000000000000000000000000000000000000000000000110000003430000000000000000000000000000000000000000000000000000000000000000000000100030000200100000100000000000000000000000000000000000000000000000000000000000000000000062231423410000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000
.........................................................................................................................................................................................................................................................TTGGATTTCAAGCTATTTGAATGG.......................................................24511.4057000000000000000000000000000000000000000000100000002000000000000000000000000000000010000000000000000000000000000000000000000000000040201101051200000000000000100000000000000000000000000000000000000001000000000000000000000001341012000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000010000000
......................................................................................................................................................................................................................................................................................CACAACAAGTCCTCTTTAAAAATTCTT.......................27209.90198000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006200102317842000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................CACAACAAGTCCTCTTTAAAAATTCT........................26205.85117000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008200332000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................TTTGAATGGCAGGACACAACAAGTCC......................................2655.20260000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000020000000000000614540000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................TTGATCTTTTAGGTTTCCCTGTTGA........................................................................................25203.857700000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000200180190180000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................TAAGGAAACTTGATCTTTTAGGTTT.................................................................................................25203.25650000000000000000000000000000000000000041101010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010100021220134200000000000000000000000000000000000002100061000001000040000700330421110000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................TGGATTTCAAGCTATTTGAATGGC......................................................2453.201600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000120000000000000000000000000000000000000000000000000000000000000000000000000000000000000002010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................AAACTTGATCTTTTAGGTTT.................................................................................................20203.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000181003900000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................TGGATTTCAAGCTATTTGAATGG.......................................................2353.001500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................TTGGATTTCAAGCTATTTGAATGGCAG....................................................2752.80140000000000000000000000000000000000000000000000100001000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000100100100000000000000000000000000000000000000000000000000000000000000000000000410001000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.........................................................................................................................................................................................................................................................TTGGATTTCAAGCTATTTGAATGGC......................................................2552.80140000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000010250120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................CACAACAAGTCCTCTTTAAAAATTC.........................25202.8056000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000010000000000000003900401000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................TTATCTTGTATTCTCCGAGTCAC.23202.45490000000000000000000000000000000000000010000000000001200000000000000000000000000000000000000000000000000000000000000000000000000000100000000110000010000000200000000000000000000000002000000000100000000000000000000000000040507661000000000000000000000000000000000000000000000000000000000001000000201000000000000000000000000030000000
...............................................................................................................................................TCTACACTAACTTTAGTAAAGCATTTGAC............................................................................................................................................................2912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................AGGAAACTTGATCTTTTAGGT...................................................................................................21202.004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000010100000000000000000002000002000001010000000001000102001000000000010000000100000000100000010000001214040
.................................................................................................................TAT-------AATCTTCAAACAGATGTT-GTC.......................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................TCTTTTAGGTTTCCCTGTTGATCTTC...................................................................................26201.903800000000000000000000000000000000000000000000000010000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000000000000000000000000000000000000000000000000000000200000000009200162000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................TAAGGAAACTTGATCTTTTAGGTT..................................................................................................24201.80360000000000000000000000000000000000000000101000000000000000000000000000000000000000200000000000000000000000000000100000000000000000000000000000000100010100000000000000000000000000000000000000000000000210000000100000120010824220000000000000000000000000000000000000000000000000000000000000000010000000000100000000000000000000000000
.........................................................................................................................................................................................................................................................................TTGAATGGCAGGACACAACAAGTCC......................................2551.8090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000204100000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000
........................................................................................................................................................................................................................................................................TTTGAATGGCAGGACACAACAAGTC.......................................2551.8090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010302110000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................ATCTTCTAAATTGGATTTCAAGCTA................................................................25201.653300000000000000000000000000000000000000001010000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002400000000000000000000000000000000000004000016000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.........................................................................................................................................................................................................................................................TTGGATTTCAAGCTATTTGAATGGCAT....................................................2751.6080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000010121002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................TTTGAATGGCAGGACACAACAAGT........................................2451.6080000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000210010000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000
........................................................................................................................................................................................................................................................................TTTGAATGGCAGGACACAACAAG.........................................2351.6080000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000401000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................ATCTTCTAAATTGGATTTCAAGC..................................................................23201.402800000000000000000000000000000000000000200200000000000000000000000000000000000000001000000000000000000000000000000000000000000000000001000000000003000001002000000000000000000000000000000000002000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000001300000000000000000000000000000000000
.........................................................................................................................................................................................................................................................TTGGATTTCAAGCTATTTGAATGGCAGGA..................................................2951.4070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001040001000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................TTTGAATGGCAGGACACAACAAGTCCTC....................................2851.4070000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000300000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................TTGGATTTCAAGCTATTTGAATGGCAGG...................................................2851.4070000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................TGGATTTCAAGCTATTTGAATGGCA.....................................................2551.4070000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002013000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................CACAACAAGTCCTCTTTAAAAATT..........................24201.30260000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000200000000000000000070513060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................TTATCTTGTATTCTCCGAGTCA..22201.25250000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003100000000000000000000400000000000000000000000000000000000000000000000000000000000400020010020000000000000000000000000000000000000000000000002000000000000000000000000000110000000000000004000000000
......................................................................................................................................................................................................................CTTGATCTTTTAGGTTTCCCTGTTGA........................................................................................26201.202400000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000100700400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................TAAAGCATTTGACTCTGTTAATC..................................................................................................................................................23201.102200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000190000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................GAAACTTGATCTTTTAGGTTT.................................................................................................21201.05210000000000000000000000000000000000000000000000000000000000000000000000000000000100000000800000010000000000030100000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000010000000000000000020000000000000000000000000010
...............................................................................................................................................TCTACACTAACTTTAGTAAAGCATT................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................TGTT-GTCTACACTAACTTTAGT........................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................TTAATCATTCATTT------------CTAGTAAGGAAACT................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......T-----------------------------------------------------------TCTTACGTA----------------------------------GTATTAT-------AATCTTCAA....................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................TTAT-------AATCTTCAAACAGATGTT-GTC.......................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................CATTCATTT------------CTAGTAAGGAAACTTGA.............................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................TTGGATTTCAAGCTATTTGAAT.........................................................2251.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................TATTAT-------AATCTTCAAACAGATGTT-GTC.......................................................................................................................................................................................2711.0010000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......T-----------------------------------------------------------TCTTACGTA----------------------------------GTATTAT-------AATCTTCAAA...................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................TATTTGAATGGCAGGACACAACAAG.........................................2541.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......T-----------------------------------------------------------TCTTACGTA----------------------------------GTATTAT-------AATCTTCAAACA.................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................AACAAGTCCTCTTTAAAAATTCTT.......................24201.002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120350000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................TTATCTTGTATTCTCCGAGTC...21200.90180000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000001000000000100000000000000000000000000000000000000000000000020000000000000032000100000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................................ACTTGATCTTTTAGGTTTCCCTGTTGA........................................................................................27200.90180000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200591000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................................................................CAAGTCCTCTTTAAAAATTCTTTATCT..................27200.90180000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000070013250000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................AAGGAAACTTGATCTTTTAGG....................................................................................................21200.85170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000010000000074000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000111000
....................................................................................................................................................................................................................AACTTGATCTTTTAGGTTTCCCTGT...........................................................................................25200.85170000000000000000000000010000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000200000000000000000000000000000000000000000001000200000000000000000140220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................TTGGATTTCAAGCTATTTGAATGGCATC...................................................2850.8040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................TTTATCTTGTATTCTCCGAGTCACA25200.80160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000200000000000000000000000000000000000000000000000001000000000000030151010000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................TAGTAAGGAAACTTGATCTTTTAGGT...................................................................................................26200.80160000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000100000000000000050100110000000000000000000000000000000000000000000000000000000000001000000010000000002000000000000000000000010
.........................................................................................................................................................................................................................................................................TTGAATGGCAGGACACAACAAGTCCTC....................................2750.8040000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................ACTTGATCTTTTAGGTTT.................................................................................................18200.75150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000420800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................ACTTGATCTTTTAGGTTTCCCTGT...........................................................................................24200.70140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000010000000000000000020410110000000000000000000000000000000000000000000000000000000000001000000100000000010000000000000000000000000
.............................................................................................................................................................................................................................TTTTAGGTTTCCCTGTTGATC......................................................................................21200.65130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030100000000000000110000110000000000000000000000000000000000000000000000000130000000000000000010000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................GACACAACAAGTCCTCTTTAAAAAT...........................25200.60120000000000000000000000000000000000000000000000000000000000000000000000000000000000500040000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................AACAAGTCCTCTTTAAAAATTCTTTA.....................26200.60120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000060005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................TGGATTTCAAGCTATTTGAATGGCAGG...................................................2750.6030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................TTGAATGGCAGGACACAACAAGTC.......................................2450.6030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................TTCTTTATCTTGTATTCTCCGAGTCACA28200.60120000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000030032200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................TGGATTTCAAGCTATTTGAATGGCAG....................................................2650.6030000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................AAATTCTTTATCTTGTATTCTCCGAGT....27200.551100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................AACTTGATCTTTTAGGTT..................................................................................................18200.55110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................CTTGATCTTTTAGGTTTCCCTGTT..........................................................................................24200.50100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050220100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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droSim2
AA---------------------------------------------------------------------------------------------------------------------------TCTTCAAACAGATGTC-ATCTACACTGACTTTAGTAAAGCATTTGACTCTGTTAATCATTACCTT------------CCAGTAAGGAAACTTGATCTATTAGGATTCCCTGTTGATCTTCTAGATTGGATTTCAAGCTATCTGAATGGCAGGACGCAAAAAGTCCTCTTTAAAAATTCTCTGTCTTGTTT-----TTTTGTTTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................................................TCTGAATGGCAGGACGCAAAAAGTC.......................................251925.324810041001232177331100193000
........................................................................................................................................................................................................................................................................TCTGAATGGCAGGACGCAAAAAGTCC......................................261316.1521000110004211027181010000
...........................................................................................................................................................TTAGTAAAGCATTTGACTCTGTTAA....................................................................................................................................................25205.301060000001030002010000
................................................................................................................................TCAAACAGATGTC-ATCTAC....................................................................................................................................................................................19205.101020000102000000000000
.........................................................................................................................................................................GACTCTGTTAATCATTACCTT------------C.............................................................................................................................22204.7094000094000000000000
........................................................................................................................................................................................................................................................ATTGGATTTCAAGCTATCTGA...........................................................21204.5591000009100000000000
..........................................................................................................................................................TTTAGTAAAGCATTTGACT...........................................................................................................................................................19204.2084000008400000000000
.............................................................................................................................................................................CTGTTAATCATTACCTT------------CCA...........................................................................................................................2024.00800008000000000000
.....................................................................................................................................................................ATTTGACTCTGTTAATCATTACCTT------------CC............................................................................................................................2724.00800008000000000000
..........................................................................................................................................................................ACTCTGTTAATCATTACCTT------------CC............................................................................................................................2224.00800008000000000000
......................................................................................................................................................................................................................................................AGATTGGATTTCAAGCTATCTGAATGGC......................................................2814.00400000020101000000
......................................................................................................................................................TGACTTTAGTAAAGCATTTGACTCTGT.......................................................................................................................................................27203.857700000039241400000000
........................................................................................................................................................................................................................................................................TCTGAATGGCAGGACGCAAAAAG.........................................23193.6870000100132310610160000
........................................................................................................................................................................................................................................................................TCTGAATGGCAGGACGCAAAAAGTCCTC....................................28133.46450000001096151040000
......................................................................................................................................................................................................................................................................TATCTGAATGGCAGGACGCAAAAAG.........................................25193.05580000006109550221000
.............................................................................................................................................................................................................................................TGATCTTCTAGATTGGATTTCAAG...................................................................2413.00300000000003000000
........................................................................................................................................................................................................................................................................TCTGAATGGCAGGACGCAAAAAGT........................................24192.8454000000461210328000
.......................................................................................................................................................................TTGACTCTGTTAATCATTACCTT------------C.............................................................................................................................24202.1543000000043000000000
.............................................................................................................................................................................................................................................TGATCTTCTAGATTGGATTTCAAGC..................................................................2512.00200010000001000000
................................................................................................................................................................................................................................TAGGATTCCCTGTTGATCTT....................................................................................2012.00200000000200000000
.....................................................................................................................................................................................................................................TTCCCTGTTGATCTTCTAGATTGGAT.........................................................................2612.00200000001000010000
.............................................................................................................................................................................CTGTTAATCATTACCTT------------CCAGTAA.......................................................................................................................2422.00400004000000000000
......................................................................................................................................................................................................................................................................TATCTGAATGGCAGGACGCAAAAAGTC.......................................27191.472800210073114072000
.........................................................................................................................................TGTC-ATCTACACTGACTTTAGTAAAGCA..................................................................................................................................................................28121.251500010053303000000
...............................................................................................................................................TCTACACTGACTTTAGTAAAGCATTT...............................................................................................................................................................26171.2421000001800120000000
...........................................................................................................................................TC-ATCTACACTGACTTTAG.........................................................................................................................................................................19181.1721000021000000000000
......................................................................................................................................................................................................................................................................TATCTGAATGGCAGGACGCAAAAAGT........................................26191.112100010073102052000
........................................................................................................................................................................................................................................................................TCTGAATGGCAGGACGCAAAAA..........................................22201.1022000000341021020000
.................................................................................................................................................TACACTGACTTTAGTAAAGCAT.................................................................................................................................................................22201.1022000002200000000000
...........................................................................................................................................................................................................................................................................................................ATTCTCTGTCTTGTT..............1511.00100000000001000000
................................................................................................................................................................................................................................TAGGATTCCCTGTTGATCT.....................................................................................1911.00100000010000000000
.......................................................................................................................................................................................................................................................................................................AAAAATTCTCTGTCTTGTT..............1911.00100000000001000000
.......................................................................................................................................................................................................................................................................................................AAAAATTCTCTGTCTTGTTT-----........2011.00100000000001000000
.......................................................................................................................................................................................................................................................GATTGGATTTCAAGCTATC..............................................................1911.00100000000001000000
......................................................................................................................................................................................................................................................AGATTGGATTTCAAGCT.................................................................1711.00100000000001000000
..................................................................................................................................................................................................................................................................AAGCTATCTGAATGGCAGGAC.................................................21201.0020000000000000020000
.............................................................................................................................................................................................................................................TGATCTTCTAGATTGGATTTCAAGCT.................................................................2611.00100100000000000000
......................................................................................................................................................................................................................................................AGATTGGATTTCAAGCTATCTGAAT.........................................................2511.00100000000001000000
......................................................................................................................................................................................................................................................AGATTGGATTTCAAGCTATCTGAATGG.......................................................2711.00100010000000000000
..............................................................................................................................................................................................................................................GATCTTCTAGATTGGAT.........................................................................1711.00100000000001000000
.............................................................................................................................................................................................T------------CCAGTAAGGAAACTTGATCTATT.......................................................................................................2411.00100010000000000000
...............................................................................................................................................................................................................AAGGAAACTTGATCTATTAGGAT..................................................................................................2311.00100000000100000000
...............................................................................................................................................................................................................................................................................................TCCTCTTTAAAAATTCTCTGTCTTGTT..............2711.00100000010000000000
.............................................................................................................................................................................................T------------CCAGTAAGGAAACTTGATCTATTAGGAT..................................................................................................2911.00100000010000000000
......................................................................................................................................................................................................................................................AGATTGGATTTCAAGCTATC..............................................................2011.00100000000001000000
..........................................................................................................................................................................................................................................................................TGAATGGCAGGACGCAAAAAGTCCTC....................................26131.001300000013027000000
.......................................................................................................................................................................................................................TTGATCTATTAGGATTCCCTGTTGA........................................................................................2511.00100000000001000000
.................................................................................................................................................................................................................................................................................................CTCTTTAAAAATTCTCTGTCTTGTT..............2511.00100000000010000000
..........................................................................................................................................................................................................................................................TGGATTTCAAGCTATCTGAATGGCAGGA..................................................28200.9519000200020000150000
.................................................................................................................................................TACACTGACTTTAGTAAAGCATTTGAC............................................................................................................................................................27180.9417000200010000131000
.........................................................................................................................................................................................................................................................TTGGATTTCAAGCTATCTGAATGGCA.....................................................26200.901810000005380001000
......................................................................................................................................................TGACTTTAGTAAAGCATTTGACTCTG........................................................................................................................................................26200.901800000080150031000
.....................................................................................................................................................................ATTTGACTCTGTTAATCATTACC............................................................................................................................................23200.8517001600000100000000
.........................................................................................................................................................................................................................................................TTGGATTTCAAGCTATCTGAATGG.......................................................24200.851700000043361000000
.............................................................................................................................TCTTCAAACAGATGTC-ATCTACACTGA...............................................................................................................................................................................27200.751500100054500000000
.....................................................................................................................................................................ATTTGACTCTGTTAATCATTACCTT------------C.............................................................................................................................26200.751500070070100000000
.................................................................................................................................................TACACTGACTTTAGTAAAGCATTTGACT...........................................................................................................................................................28180.721300000020010091000
.........................................................................................................................................................................................................................................................TTGGATTTCAAGCTATCTGAATGGC......................................................25200.7014000000000000140000
......................................................................................................................................................................................................................................................................................CGCAAAAAGTCCTCTTTAAAAATT..........................24150.671000000060220000000
............................................................................................................................................................TAGTAAAGCATTTGACTCTGTTAA....................................................................................................................................................24200.6513000000130000000000
......................................................................................................................................................................................................................................................................TATCTGAATGGCAGGACGCAAAAA..........................................24200.601200000036111000000
........................................................................................................................................................................................................................................................ATTGGATTTCAAGCTATCTGAATGGC......................................................26200.601200600050100000000
...............................................................................................................................................................................................................................................................TTCAAGCTATCTGAATGGCAGGACGC...............................................26170.53900010031101011000
.................................................................................................................................................TACACTGACTTTAGTAAAGCA..................................................................................................................................................................21200.501000000071101000000
.........................................................................................................................................................................................................................................................TTGGATTTCAAGCTATCTGAATGGCAG....................................................27200.501000000052011010000
.............................................................................................................................................................................CTGTTAATCATTACCTT------------CCAGTAAGG.....................................................................................................................2620.50100010000000000000
..............................................................................................................................................................................................................................ATTAGGATTCCCTGTTGAT.......................................................................................1920.50100000000001000000
.................................................................................................................................................................................................................................................................CAAGCTATCTGAATGGCAGGA..................................................21200.501000000000000046000
........................................................................................................................................................................TGACTCTGTTAATCATTACCTT------------CCAGT.........................................................................................................................2720.50100000000010000000
......................................................................................................................................................................TTTGACTCTGTTAATCATTACCTT------------CCAG..........................................................................................................................2820.50100000010000000000
..........................................................................................................................................................................................................................................................TGGATTTCAAGCTATCTGAATGGC......................................................24200.5010000000100000000000
.........................................................................................................................................................................................................................................................TTGGATTTCAAGCTATCTGAATGGCAGGA..................................................29200.45900000044000001000
........................................................................................................................................................................................................................................................ATTGGATTTCAAGCTATCTGAATGG.......................................................25200.45900000050310000000
.......................................................................................................................................................................TTGACTCTGTTAATCATTACCTT------------..............................................................................................................................23200.45900000000090000000
..........................................................................................................................................................................................................................................................TGGATTTCAAGCTATCTGAATGGCA.....................................................25200.40800010050000002000
..............................................................................................................................................................................................................................................................TTTCAAGCTATCTGAATGGCAGGACGC...............................................27150.40600000010000050000
...............................................................................................................................................................................................................................................................................................TCCTCTTTAAAAATTCTCTGTCTTG................2580.38300000000210000000
..........................................................................................................................................................................................................................................................TGGATTTCAAGCTATCTGAATGGCAGG...................................................27200.35700000030000040000
...............................................................................................................................................TCTACACTGACTTTAGTAAAGCAT.................................................................................................................................................................24180.33600000000210030000
...............................................................................................................................................................................................................................................................TTCAAGCTATCTGAATGGCAGGACGCAA.............................................28150.33500000001000040000
..........................................................................................................................................................................................................................................................................TGAATGGCAGGACGCAAAAAGTC.......................................23190.32600000000001050000
........................................................................................................................................................................................................................................................................TCTGAATGGCAGGACGCAAAAAGTCCT.....................................27130.31400000031000000000
.....................................................................................................................................................CTGACTTTAGTAAAGCATTTGACTCTGT.......................................................................................................................................................28200.30600000033000000000
....................................................................................................................................................ACTGACTTTAGTAAAGCATTTGACT...........................................................................................................................................................25200.30600000000200040000
................................................................................................................................................................AAAGCATTTGACTCTGTTAATCAT................................................................................................................................................24200.30600000010010040000
.........................................................................................................................................TGTC-ATCTACACTGACTTTAGTAAAGC...................................................................................................................................................................27140.29400020000200000000
..............................................................................................................................................................................................................................................................TTTCAAGCTATCTGAATGGCAGGACGCA..............................................28150.27400000010000030000
.................................................................................................................................................TACACTGACTTTAGTAAAGCATTTGA.............................................................................................................................................................26190.26500000000000050000
...........................................................................................................................................................................................................................................................GGATTTCAAGCTATCTGAATGGCAGGA..................................................27200.25500010030001000000
.........................................................................................................................................................................................................................................................TTGGATTTCAAGCTATCTGAATGGCAGG...................................................28200.25500000013010000000
............................................................................................................................................................TAGTAAAGCATTTGACTCTGTTAATCAT................................................................................................................................................28200.25500000032000000000
........................................................................................................................................................................TGACTCTGTTAATCATTACCTT------------C.............................................................................................................................23200.25500000040010000000
............................................................................................................................................C-ATCTACACTGACTTTAGTA.......................................................................................................................................................................20180.22400000030001000000
........................................................................................................................................................................................................................................................................TCTGAATGGCAGGACGCAAAAAGTA.......................................25190.21400000000000040000
.......................................................................................................................................................................TTGACTCTGTTAATCA.................................................................................................................................................16200.20400000004000000000
......................................................................................................................................................TGACTTTAGTAAAGCATTTGACT...........................................................................................................................................................23200.20400000020000020000
.............................................................................................................................................................................................................................................................ATTTCAAGCTATCTGAATGGC......................................................21200.20410000000201000000
...........................................................................................................................................................TTAGTAAAGCATTTGACTCTGTTAAA...................................................................................................................................................26200.20400000040000000000
...........................................................................................................................................................................................................................................................................................AAAGTCCTCTTTAAAAATTCTCTGTCTTG................2950.20100000010000000000
......................................................................................................................................................................................................................................................................TATCTGAATGGCAGG...................................................15200.20400000000004000000
.................................................................................................................................................TACACTGACTTTAGTAAAGCATTTG..............................................................................................................................................................25200.20400000000000031000
..........................................................................................................................................................................................................................................................................................AAAAGTCCTCTTTAAAAATTCTCTGTCT..................2850.20100000000010000000
........................................................................................................................................................................................................................................................................TCTGAATGGCAGGACGCAAAA...........................................21200.20400000010100020000
...............................................................................................................................................TCTACACTGACTTTAGTAAAGCATT................................................................................................................................................................25170.18300000000003000000
..........................................................................................................................................................................................................................................................................TGAATGGCAGGACGCAAAAAG.........................................21190.16300000000001002000
.......................................................................................................................................................................................................................................................................ATCTGAATGGCAGGACGCAAAAAG.........................................24190.16300010000100010000
........................................................................................................................................................................................................................................................................TCTGAATGGCAGGACGCAAAAAGTCCA.....................................27130.15200000000000020000
....................................................................................................................................ACAGATGTC-ATCTACACTGACTTTAGT........................................................................................................................................................................27130.15200000000001100000
..............................................................................................................................................................................................................................................................TTTCAAGCTATCTGAATGGCAGGACGCAA.............................................29130.15200000000000020000
..........................................................................................................................................................TTTAGTAAAGCATTTGACTCTGTTA.....................................................................................................................................................25200.15300000020100000000
...............................................................................................................................TTCAAACAGATGTC-ATCTACACTGACT.............................................................................................................................................................................27200.15300010010000010000
.........................................................................................................................................................CTTTAGTAAAGCATTTGACTCTGTTAAT...................................................................................................................................................28200.15300000000000030000
....................................................................................................................................................ACTGACTTTAGTAAAGCATTTGACTCTGT.......................................................................................................................................................29200.15300000011100000000
........................................................................................................................................................................................................................................................................TCTGAATGGCAGGACGCAAAAAA.........................................23200.15300000010000020000
...................................................................................................................................................CACTGACTTTAGTAAAGCATT................................................................................................................................................................21200.15300000010100010000
...............................................................................................................................................................................................................................................................TTCAAGCTATCTGAATGGC......................................................19200.15300010000002000000
...........................................................................................................................................................................................................................................................GGATTTCAAGCTATCTGAATGGC......................................................23200.15300000000003000000
................................................................................................................................................................................................................................................................TCAAGCTATCTGAATGGCAG....................................................20200.15300000000000003000
......................................................................................................................................................................TTTGACTCTGTTAATCATTACCTT------------C.............................................................................................................................25200.15300000000030000000
...............................................................................................................................................TCTACACTGACTTTAGTAAAGC...................................................................................................................................................................22200.15300300000000000000
........................................................................................................................................................................................................................................................................TCTGAATGGCAGGACGCAAAAAAA........................................24200.15300000000100020000
.................................................................................................................................................TACACTGACTTTAGTAAAGCATT................................................................................................................................................................23200.15300000020000001000
..............................................................................................................................................................................................................................................................TTTCAAGCTATCTGAATGGCAG....................................................22200.15300000000021000000
...............................................................................................................................TTCAAACAGATGTC-ATCTACACTGA...............................................................................................................................................................................25200.15300000002100000000
................................................................................................................................................................................................................................................................TCAAGCTATCTGAATGG.......................................................17200.15300000000003000000
.........................................................................................................................................TGTC-ATCTACACTGACTTTAGTAAAG....................................................................................................................................................................26150.13200000002000000000
...............................................................................................................................................................................................................................................................TTCAAGCTATCTGAATGGCAGGACGCAAA............................................29150.13200000000110000000
.....................................................................................................................................................................................................................................................................CTATCTGAATGGCAGGACGCAAAAAG.........................................26160.13200000010010000000
...........................................................................................................................................TC-ATCTACACTGACTTTAGTA.......................................................................................................................................................................21170.12200000010001000000
.........................................................................................................................................TGTC-ATCTACACTGACTTTAGTAAA.....................................................................................................................................................................25170.12200000000020000000
............................................................................................................................................C-ATCTACACTGACTTTAGTAA......................................................................................................................................................................21180.11200000020000000000
..............................................................................................................................................................................................................................................................TTTCAAGCTATCTGAATGGCAGGACG................................................26180.11200000000000020000
.......................................................................................................................................................................................................................................................................ATCTGAATGGCAGGACGCAAAAAGT........................................25190.11200000010000010000
......................................................................................................................................................................................................................................................................TATCTGAATGGCAGGACGCAAAAAGAA.......................................27190.11200000000000020000
..........................................................................................................................................................................................................................................................................TGAATGGCAGGACGCAAAAAGT........................................22190.11200000000001010000
..........................................................................................................................................................................................................................................................................TGAATGGCAGGACGCAAAAAGTA.......................................23190.11200000000000020000
.........................................................................................................................................................................................................................................................TTGGATTTCAAGCTATCTGAATGGCG.....................................................26200.10200001100000000000
.................................................................................................................................................TACACTGACTTTAGTAAAGCATTT...............................................................................................................................................................24200.10200010000000010000
.............................................................................................................................TCTTCAAACAGATGTC-ATCTACAC..................................................................................................................................................................................24200.10200000000110000000
....................................................................................................................................................................................................................................................................................................TTTAAAAATTCTCTGTCTT.................19100.10100000000001000000
...............................................................................................................................................................................................................................................................TTCAAGCTATCTGAATGGCAGGACG................................................25200.10200000000000011000
.....................................................................................................................................................................................................................................................................CTATCTGAATGGCAGGACGCA..............................................21200.10200000010000010000
......................................................................................................................................................TGACTTTAGTAAAGCATTTGACTTGC........................................................................................................................................................26200.10200000000000020000
.A---------------------------------------------------------------------------------------------------------------------------TCTTCAAACAGATGTC-ATCTACACTGA...............................................................................................................................................................................28200.10200000000020000000
...............................................................................................................................TTCAAACAGATGTC-ATCTACACTGACTT............................................................................................................................................................................28200.10200000010001000000
..........................................................................................................................................................................................................................................................TGGATTTCAAGCTATCTGAATGGCAGGAC.................................................29200.10200000020000000000
.....................................................................................................................................................................ATTTGACTCTGTTAATCATTACCG...........................................................................................................................................24200.10200200000000000000
......................................................................................................................................................................................................................................................................TATCTGAATGGCAGGACGCAAAA...........................................23200.10200000000200000000
................................................................................................................................................CTACACTGACTTTAGTAAAGC...................................................................................................................................................................21200.10200000002000000000
......................................................................................................................................................TGACTTTAGTAAAGCATTTGACTCT.........................................................................................................................................................25200.10200000000000020000
............................................................................................................................................................................................................................................................................................AAGTCCTCTTTAAAAA............................16200.10200000000002000000
........................................................................................................................................................................................................................................................ATTGGATTTCAAGCTATC..............................................................18200.10200000000002000000
.................................................................................................................................................TACACTGACTTTAGTAAAGC...................................................................................................................................................................20200.10200100010000000000
..................................................................................................................................................................................................................................................................AAGCTATCTGAATGGCAGGACGCA..............................................24200.10200000001001000000
..............................................................................................................................CTTCAAACAGATGTC-ATCTAC....................................................................................................................................................................................21200.10200010000001000000
..................................................................................................................................................ACACTGACTTTAGTAAAGCAT.................................................................................................................................................................21200.10200000000002000000
................................................................................................................................................................................................................................................................TCAAGCTATCTGAATGGCAGGACG................................................24200.10200000000000011000
..........................................................................................................................................................................................................................................................TGGATTTCAAGCTATCTGAATGG.......................................................23200.10200000010100000000
.......................................................................................................................................................................................................................................................................................................AAAAATTCTCTGTCTTGT...............18110.09100000000001000000
.....................................................................................................................................................................................................................................................................................................TTAAAAATTCTCTGTCTTG................19110.09100000000100000000
.........................................................................................................................................TGTC-ATCTACACTGACTTTAGTAAAGCATT................................................................................................................................................................30110.09100000010000000000
........................................................................................................................................................................................................................................................................TCTGAATGGCAGGACGCAAAAAGTCCTCT...................................29120.08100000001000000000
......................................................................................................................................................................................................................................................................................................TAAAAATTCTCTGTCT..................16120.08100000000001000000
............................................................................................................................................C-ATCTACACTGACTTTAGTAAAGCATT................................................................................................................................................................27120.08100000000000010000
..........................................................................................................................................................................................................................................................................TGAATGGCAGGACGCAAAAAGTCC......................................24130.08100100000000000000
......................................................................................................................................................................................................................................................................TATCTGAATGGCAGGACGCAAAAAGTCCTC....................................30130.08100000010000000000
.......................................................................................................................................................................................................................................................................ATCTGAATGGCAGGACGCAAAAAGTCCTC....................................29130.08100000010000000000
......................................................................................................................................................................................................................................................................................................TAAAAATTCTCTGTC...................15130.08100000000100000000
......................................................................................................................................................................................................................................................................................CGCAAAAAGTCCTCTTTAAAAATTCT........................26130.08100000000100000000
.....................................................................................................................................................................................................................................................................................ACGCAAAAAGTCCTCTTTAAAAATTC.........................26130.08100000000000010000
..............................................................................................................................................................................................................................................................................TGGCAGGACGCAAAAAGTCCTCTTTAAAA.............................29140.07100000000100000000
...............................................................................................................................................................................................................................................................................GGCAGGACGCAAAAAGTCCTCTTTA................................25140.07100010000000000000
..........................................................................................................................................GTC-ATCTACACTGACTTTAGTAAAGC...................................................................................................................................................................26140.07100010000000000000
..............................................................................................................................................................................................................................................................................TGGCAGGACGCAAAAAGTCCTCTTT.................................25140.07100010000000000000
.........................................................................................................................................TGTC-ATCTACACTGACTTTAGTAAAGT...................................................................................................................................................................27150.07100000000001000000
...............................................................................................................................................................................................................................................................TTCAAGCTATCTGAATGGCAGGACGCAAAA...........................................30150.07100000010000000000
..............................................................................................................................................................................................................................................................TTTCAAGCTATCTGAATGGCAGGACGCT..............................................28150.07100000000000010000
...................................................................................................................................................................................................................................................................AGCTATCTGAATGGCAGGACGCAAAAAG.........................................28150.07100000001000000000
..............................................................................................................................................ATCTACACTGACTTTAGTAAAGCAT.................................................................................................................................................................25160.06100000000000010000
.....................................................................................................................................................................................................................................................................CTATCTGAATGGCAGGACGCAAAAAGTC.......................................28160.06100000000000010000
..................................................................................................................................................................................................................................................................AAGCTATCTGAATGGCAGGACGCAAA............................................26170.06100000001000000000
......................................................................................................................................................................................................................................................................................CGCAAAAAGTCCTCTTTAAAAAT...........................23170.06100000000000010000
.........................................................................................................................................TGTC-ATCTACACTGACTTTAGTAA......................................................................................................................................................................24170.06100000000010000000
.....................................................................................................................................................................................................................................................................CTATCTGAATGGCAGGACGCAAAAA..........................................25170.06100000001000000000
................................................................................................................................................................................................................................................................TCAAGCTATCTGAATGGCAGGACGC...............................................25170.06100000000000010000
...................................................................................................................................................................................................................................................................AGCTATCTGAATGGCAGGACGCAAAA...........................................26170.06100000000000010000
...............................................................................................................................................TCTACACTGACTTTAGTAAAGCATTTG..............................................................................................................................................................27170.06100000010000000000
...................................................................................................................................................................................................................................................................AGCTATCTGAATGGCAGGACGCAAA............................................25170.06100000010000000000
..........................................................................................................................................GTC-ATCTACACTGACTTTAGT........................................................................................................................................................................21180.06100000000010000000
.................................................................................................................................................TACACTGACTTTAGTAAAGCATTTGACTC..........................................................................................................................................................29180.06100000000000010000
.................................................................................................................................................TACACTGACTTTAGTAAAGCATTTGACA...........................................................................................................................................................28180.06100000000000010000
.......................................................................................................................................................................................................................................................................ATCTGAATGGCAGGACGCAAAAAGTC.......................................26190.05100000000000010000
.................................................................................................................................................TACACTGACTTTAGTAAAGCATTTGACTT..........................................................................................................................................................29190.05100000000000001000
.........................................................................................................................................................................................................................................................................CTGAATGGCAGGACGCAAAAAGT........................................23190.05100000000000010000
......................................................................................................................................................................................................................................................................TATCTGAATGGCAGGACGCAAAAAGAG.......................................27190.05100000000000010000
.............................................................................................................................TCTTCAAACAGATGTC-ATCTACACTGAC..............................................................................................................................................................................28190.05100000000000001000
droSec2
GGT-------------------------------------------------------------------------------------------------------TTTCAAAAAT-------AATTTTCAAACAGATGTC-ATCTACACTGATTTTAGTAAAGCATTTGACTCTGTTAATCATTACCTT------------CTAATAAGAAAACTTGATCTTATAGGTTTCCCTGTTGATCTTCTAAATTGGATTTCAAGCTATCTGAATGGCAGGAGACAACAAGTCCTCTTTAAAAATTCGTTATCTTCTATTCTCCGAGTCACASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................................................................................................................................................................................................GTTATCTTCTATTCTCCGAGTCAC.24200.751514010
.............................................................................................................................................................................CTGTTAATCATTACCTT------------CTAATAAGA.....................................................................................................................26200.4599000
..........................................................................................................................................GTC-ATCTACACTGATTTTAGTAAAGCA..................................................................................................................................................................27200.2555000
.............................................................................................................................................................................CTGTTAATCATTACCTT------------CTAATAAGAA....................................................................................................................27200.2555000
...........................................................................................................................................................TTAGTAAAGCATTTGACTCTGTTAA....................................................................................................................................................25200.2044000
..............................................................................................................................................................................................................................................................................................................CGTTATCTTCTATTCTCCGAGTCACA26200.1533000
......................................................................................................................................................................................................................................................AAATTGGATTTCAAGCTATCTGAATG........................................................26200.1022000
...............................................................................................................................TTCAAACAGATGTC-ATCTACACTGATT.............................................................................................................................................................................27200.1022000
..............................................................................................................................................................................TGTTAATCATTACCTT------------CTAATAAGAA....................................................................................................................26200.1022000
................................................................................................................................................CTACACTGATTTTAGTAAAGCATT................................................................................................................................................................24200.1022000
................................................................................................................................TCAAACAGATGTC-ATCTACACTGATTT............................................................................................................................................................................27200.0511000
................................................................................................................................................CTACACTGATTTTAGTAAAGCATTTGACT...........................................................................................................................................................29200.0511000
.....................................................................................................................................................................................................................................................TAAATTGGATTTCAAGCTATCTGAA..........................................................25200.0511000
........................................................................................................................................................................................TACCTT------------CTAATAAGAAAACTTGATCT..........................................................................................................26200.0511000
....................................................................................................................................................................................................................AACTTGATCTTATAGGTTTCCCTG............................................................................................24200.0511000
............................................................................................................................................C-ATCTACACTGATTTTAGTAAAGCATT................................................................................................................................................................27200.0511000
..........................................................................................................................................GTC-ATCTACACTGATTTTAGTAAAGCATT................................................................................................................................................................29200.0511000
.............................................................................................................................................................................................................................................................................................................TCGTTATCTTCTATTCTCCGAGTC...24200.0511000
...................................................................................................................................................................................................................................................TCTAAATTGGATTTCAAGCTA................................................................21200.0511000
.............................................................................................................................................................................CTGTTAATCATTACCTT------------CTAATAAGT.....................................................................................................................26200.0511000
.........................................................................................................................................................................................................................................................TTGGATTTCAAGCTATCTGAATGGCAG....................................................27200.0511000
.............................................................................................................................................................................CTGTTAATCATTACCTT------------CTAATAAGAAA...................................................................................................................28200.0511000
......................................................................................................................................................TGATTTTAGTAAAGCATTTG..............................................................................................................................................................20200.0511000
..........................................................................................................................................GTC-ATCTACACTGATTTTAGTAAAG....................................................................................................................................................................25200.0511000
..............................................................................................................................................................................TGTTAATCATTACCTT------------CTAATAAGAAAAC.................................................................................................................29200.0511000
..........................................................................................................................................................................................................................................TGTTGATCTTCTAAATTGGAT.........................................................................21200.0510001
..........................................................................................................................................................TTTAGTAAAGCATTTGACT...........................................................................................................................................................19200.0511000
.................................................................................................................................................TACACTGATTTTAGTAAAGCATTT...............................................................................................................................................................24200.0511000
......................................................................................................................................................TGATTTTAGTAAAGCATTTGA.............................................................................................................................................................21200.0511000
..........................................................................................................................................................................................................................................................TGGATTTCAAGCTATCTGAATGGC......................................................24200.0510010
...............................................................................................................................TTCAAACAGATGTC-ATCTACACTGATTT............................................................................................................................................................................28200.0511000
droYak3
AA---------------------------------------------------------------------------------------------------------------------------TCTTCAAACATATGTC-ATTTATACGGATTTTAGTAAAGCATTCGACTCTGTTAATCATTCACTT------------TTAATAAAAAAACTTGATTTATTATGTTTCCCTGTTGATCTCCTAAATTGGATTTTAAGTTATCTGAATGGCAGGACCCAACGGGTCCTCTTTAAAAATGTTCTTTCTTGTATTCTCCGAGTCACASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................................................................................................................................................................................................................................................TAAGTTATCTGAATGGCAGGACCC...............................................2430.33101000000000
.....................................................................................................................................................................................................................................TTCCCTGTTGATCTCCTAAATTGGAT.........................................................................26200.30600000000006
......................................................................................................................................................................................................................................TCCCTGTTGATCTCCTAAATTGGAT.........................................................................25200.20404000000000
......................................................................................................................................................................................................................................TCCCTGTTGATCTCCTAAATTGGATT........................................................................26200.20403000000001
............................................................................................................................................................TAGTAAAGCATTCGACTCTGTTAATC..................................................................................................................................................26200.15302010000000
....................................................................................................................................................ACGGATTTTAGTAAAGCATTCGAC............................................................................................................................................................24200.10202000000000
....................................................................................................................................................ACGGATTTTAGTAAAGCATTCGACTCT.........................................................................................................................................................27200.10200200000000
.................................................................................................................................................................................................................................................................TAAGTTATCTGAATGGCAGGAC.................................................22200.10202000000000
.................................................................................................................................................................................................................................................................TAAGTTATCTGAATGGCAGGA..................................................21200.05101000000000
........................................................................................................................................................................CGACTCTGTTAATCATTCACTT------------TTAA..........................................................................................................................26200.05101000000000
.........................................................................................................................................................................GACTCTGTTAATCATTCACTT------------TTAA..........................................................................................................................25200.05101000000000
.........................................................................................................................................................................GACTCTGTTAATCATTCACTT------------TTAATA........................................................................................................................27200.05101000000000
.................................................................................................................................................................................................................................................................TAAGTTATCTGAATGGCAG....................................................19200.05101000000000
....................................................................................................................................................ACGGATTTTAGTAAAGCATTCGACTC..........................................................................................................................................................26200.05101000000000
......................................................................................................................................................................................................................................TCCCTGTTGATCTCCTAAATTGGATA........................................................................26200.05101000000000
.................................................................................................................................................................................TAATCATTCACTT------------TTAATAAAAAAACT................................................................................................................27200.05101000000000
................................................................................................................................................................................................................................................................................................................CTTTCTTGTATTCTCCGAGTCAC.23200.05100100000000
.................................................................................................................................................TATACGGATTTTAGTAAAGCATTC...............................................................................................................................................................24200.05101000000000
......................................................................................................................................................................................................................................TCCCTGTTGATCTCCTAAATTG............................................................................22200.05101000000000
............................................................................................................................................................TAGTAAAGCATTCGACTCTGTTA.....................................................................................................................................................23200.05101000000000
.................................................................................................................................................................................................................................................................................................................TTTCTTGTATTCTCCGAGA....19200.05101000000000
...............................................................................................................................................TTTATACGGATTTTAGTAAAGCATT................................................................................................................................................................25200.05101000000000
.............................................................................................................................................................................CTGTTAATCATTCACTT------------TTAATAAAA.....................................................................................................................26200.05101000000000
....................................................................................................................................................ACGGATTTTAGTAAAGCATTC...............................................................................................................................................................21200.05100100000000
droEre2
AA----------------------------------------------------------------------------------------------------------------AT-------AATTTCCAAACAGATGTT-ATCTACACTGTCTTCAGTAAAGCTTTTGACTCTGTTAATCATTCACTT------------TTGGTTAGGAAACTTGATTTATAAGGTTTCCCTGTTGATCTTCTAAATTGGATTTTAAGTTATCTTAATGGCAGGACGCATCGTGTCCTGTTTAAAAATTCTCTTTCTTGTATTCTCCGAGTCACASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............................................................................................................................................................................GTTAATCATTCACTT------------TTGGTTAGGAAA..................................................................................................................2790.1110000010
.................................................................................................................................................................................TAATCATTCACTT------------TTGGTTAGGAAACT................................................................................................................2790.1110000001

Generated: 05/18/2015 at 02:33 AM