ID:

dmo_237

Coordinate:

scaffold_6308:1300891-1300952 +

Confidence:

Known Ortholog

Class:

Testes-restricted

Genomic Locale:

antisense_to_intron

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-34.0

Flybase annnotation

Antisense to intron [Dmoj\GI10984-in]

No Repeatable elements found

Sense Strand Reads

TTGTCTGTGTGTTCGAGCCTATGCACTACTCTCCCAGCTCGTGGTCAGTTGGGAGTTAGCAAGCAATACCTAACTGTATACGATTTGTTATATATTGCTCGCTATTCCAAAATTGCCATGCAGCAATATCAACGAGTAGTAATAGGCATAGGGCGAGAGTGA

***********************************.((((((((.(((((.(((((.(((.(((((((..((((............))))..))))))).))))))))..)))))))))).)))..************************************
Read size # Mismatch Hit Count Total Norm Total V110

male body
M046

female body

M060

embryo

V049

head

V056

head

V041

embryo

..........................................................................................TATATTGCTCGCTATTCCAAA................................................... 21 0 1 158.00 158 141 12 3 1 1 0
..........................................................................................TATATTGCTCGCTATTCCAAAA.................................................. 22 0 1 132.00 132 112 8 10 1 0 1
..........................................................................................TATATTGCTCGCTATTCCAA.................................................... 20 0 1 110.00 110 90 12 2 2 3 1
.........................................................................................ATATATTGCTCGCTATTCCAAA................................................... 22 0 1 33.00 33 33 0 0 0 0 0
..........................................................................................TATATTGCTCGCTATTCCAAAAA................................................. 23 1 1 26.00 26 20 4 0 1 1 0
.........................................................................................ATATATTGCTCGCTATTCCAA.................................................... 21 0 1 21.00 21 20 0 0 1 0 0
..........................................................................................TATATTGCTCGCTATTCCA..................................................... 19 0 1 14.00 14 5 5 0 1 2 1
.........................................................................................ATATATTGCTCGCTATTCCA..................................................... 20 0 1 13.00 13 10 2 0 1 0 0
..........................................................................................TATATTGCTCGCTATTCCAAT................................................... 21 1 1 13.00 13 13 0 0 0 0 0
........................................................................................TATATATTGCTCGCTATTCCAA.................................................... 22 0 1 11.00 11 9 1 0 0 0 1
........................................................................................TATATATTGCTCGCTATTCCA..................................................... 21 0 1 10.00 10 8 1 1 0 0 0
.........................................................................................ATATATTGCTCGCTATTCCATC................................................... 22 2 1 9.00 9 8 1 0 0 0 0
.........................................................................................ATATATTGCTCGCTATTCCAAT................................................... 22 1 1 8.00 8 8 0 0 0 0 0
..........................................................................................TATATTGCTCGCTATTCCAAC................................................... 21 1 1 7.00 7 6 0 0 1 0 0
..............................CTCCCAGCTCGTGGTCAGTT................................................................................................................ 20 0 1 6.00 6 4 0 1 1 0 0
.........................................................................................ATATATTGCTCGCTATTCCAAC................................................... 22 1 1 6.00 6 6 0 0 0 0 0
..........................................................................................TATATTGCTCGCTATTCCATC................................................... 21 2 1 6.00 6 6 0 0 0 0 0
........................................................................................TATATATTGCTCGCTATTCC...................................................... 20 0 1 4.00 4 4 0 0 0 0 0
..........................................................................................TATATTGCTCGCTATTCCAATA.................................................. 22 1 1 4.00 4 4 0 0 0 0 0
.........................................................................................ATATATTGCTCGCTATTCCACC................................................... 22 2 1 4.00 4 3 0 0 0 1 0
..........................................................................................TATATTGCTCGCTATTCCAC.................................................... 20 1 1 3.00 3 2 1 0 0 0 0
.........................................................................................ATATATTGCTCGCTATTCCAC.................................................... 21 1 1 3.00 3 3 0 0 0 0 0
..................................................GGGAGTTAGCAAGCAATACCTA.......................................................................................... 22 0 1 3.00 3 0 2 1 0 0 0
..........................................................................................TATATTGCTCGCTATTCCAAAAT................................................. 23 0 1 3.00 3 3 0 0 0 0 0
........................................................................................TATATATTGCTCGCTATTCCAAA................................................... 23 0 1 3.00 3 3 0 0 0 0 0
..........................................................................................TATATTGCTCGCTATTCCAT.................................................... 20 1 1 2.00 2 2 0 0 0 0 0
..........................................................................................TATATTGCTCGCTATTCCAAAAAAA............................................... 25 3 1 2.00 2 2 0 0 0 0 0
..........................................................................................TATATTGCTCGCTATTCCAAAC.................................................. 22 1 1 2.00 2 1 0 1 0 0 0
........................................................................................TATATATTGCTCGCTATTCCAT.................................................... 22 1 1 2.00 2 2 0 0 0 0 0
..........................................................................................TATATTGCTCGCTATTCCACC................................................... 21 2 1 2.00 2 2 0 0 0 0 0
..........................................................................................TATATTACTCGCTATTCCAAA................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................CATATTGCTCGCTATTCCAAA................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TATATTGCTCGCTATTCCATT................................................... 21 2 1 1.00 1 0 0 0 1 0 0
.........................................................................................ATATATTGCTCGCTATTCCATT................................................... 22 2 1 1.00 1 1 0 0 0 0 0
........................................................................................TATATATTGCTCGCTATTTCAAA................................................... 23 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TATATTGCTCGCTATTCCAAGA.................................................. 22 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TATATTGCTCTCTATTCCAAA................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TATATTGCTCGCTATTCCACAA.................................................. 22 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................AATATTGCTCGCTATTCCAAAAG................................................. 23 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................TATATTGCTCCCTATTCCAAA................................................... 21 1 1 1.00 1 1 0 0 0 0 0
.........................................................................................AGATATTGCTCGCTATTCCA..................................................... 20 1 1 1.00 1 0 0 1 0 0 0
..........................................................................................TATATTGCTCGCTATTCCAAG................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..................................................GGGAGTTAGCAAGCAATACC............................................................................................ 20 0 1 1.00 1 0 0 1 0 0 0
...........................ACTCTCCCAGCTCGTGGTCAGTT................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................TATATTGCTCGCTACTCCAA.................................................... 20 1 1 1.00 1 1 0 0 0 0 0
.........................................................................................ATATATTGCTCGCTATTCCAAAT.................................................. 23 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TATATTGCTCGCTATGCCAA.................................................... 20 1 1 1.00 1 0 0 0 0 1 0
........................................................................................TATATATTGCTCGCTATTCCAAC................................................... 23 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TATATTGCTCGCTATTCCATA................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TATATTGCTCGCTATTGCAA.................................................... 20 1 1 1.00 1 1 0 0 0 0 0
.........................................................................................ATATATTGCTCGCTATTCCAAAAA................................................. 24 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TATATTGCTCGCTATTCAAAAAA................................................. 23 2 1 1.00 1 1 0 0 0 0 0
.........................................................................................ATATATTGCTCGCTATTCCATA................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.................................................TTGGAGTTAGCAAGCAATACTTC.......................................................................................... 23 3 1 1.00 1 0 0 1 0 0 0
............................................................................................TATTGCTCGCTATTCCAAAA.................................................. 20 0 1 1.00 1 0 1 0 0 0 0
.........................................................................................ATATATTGCTCGCTATTCCC..................................................... 20 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TACATTGCTCGCTATTCCAAA................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TATATTGCTCGCTATTCCAAAT.................................................. 22 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TATATTGCTCGCTATTCCAAATC................................................. 23 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................TATATTGCTCGCTATTCCAAATTC................................................ 24 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................TATAATGCTCGCTATTCCAA.................................................... 20 1 1 1.00 1 1 0 0 0 0 0
.........................................................................................ATGTATTGCTCGCTATTCCAA.................................................... 21 1 1 1.00 1 0 0 1 0 0 0
.........................................................................................ATATATTGCTCGCTATTCCT..................................................... 20 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TATATTGCTCGCTATTCCAAATA................................................. 23 2 1 1.00 1 1 0 0 0 0 0
........................................................................................TATATATTGCTCGCTATTCCC..................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TATATCGCTCGCTATTCCAAA................................................... 21 1 1 1.00 1 1 0 0 0 0 0
........................................................................................TATATATTGCTCGCTATTCCATC................................................... 23 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................TATATTGCTCGCTATTCCAAAAAA................................................ 24 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................TACATTGCTCGCTATTCCAAAAA................................................. 23 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................TATATTGCTCGCTATTCCATCA.................................................. 22 2 1 1.00 1 1 0 0 0 0 0
..................................................GTGAGTTAGCAAGCAATACCTA.......................................................................................... 22 1 1 1.00 1 0 0 1 0 0 0
........................................................................................TATATATTGCTCGCTATTCCATCT.................................................. 24 3 2 0.50 1 1 0 0 0 0 0
..........................................................................................TATATTGCTCGCTATTCCATTC.................................................. 22 3 3 0.33 1 1 0 0 0 0 0
.........................................................................................ATATATTGCTCGCTATCCCTC.................................................... 21 3 11 0.09 1 1 0 0 0 0 0

Anti-sense strand reads

AACAGACACACAAGCTCGGATACGTGATGAGAGGGTCGAGCACCAGTCAACCCTCAATCGTTCGTTATGGATTGACATATGCTAAACAATATATAACGAGCGATAAGGTTTTAACGGTACGTCGTTATAGTTGCTCATCATTATCCGTATCCCGCTCTCACT

************************************.((((((((.(((((.(((((.(((.(((((((..((((............))))..))))))).))))))))..)))))))))).)))..***********************************
Read size # Mismatch Hit Count Total Norm Total M046

female body

V110

male body
V049

head

V056

head

...............................................................GTTATGGATTGACATATGCTAAACAA......................................................................... 26 0 1 1.00 1 1 0 0 0
.............................................................TCGTTATGGATTGACATATGCTAAACAA......................................................................... 28 0 1 1.00 1 1 0 0 0
......................................AGCACCAGTCAACCCTCAATC....................................................................................................... 21 0 1 1.00 1 1 0 0 0
.................................................................................................................ACGGTTTGTCGTTGTAGTTGCTC.......................... 23 3 8 0.38 3 0 3 0 0
................CGGCTACGTGATGCGAGGGT.............................................................................................................................. 20 2 3 0.33 1 0 0 1 0
......................CTTGATGAGTGGGTCGAGCCC....................................................................................................................... 21 3 3 0.33 1 0 0 0 1
..................GATAGGTGTGGAGAGGGTCG............................................................................................................................ 20 3 10 0.10 1 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droMoj3 scaffold_6308:1300841-1301002 + dmo_237 confident TTGTCTGTGTGTTCGAGCCTATGCACTACTCT---CCCAGC-TCGTGGTCAGTTGGGAGTTAGCAAGCAATACCTAACTGTATACGATTTGTTATATATTGCTCGCTATTCCAAAATTGCCATGCAGCAATATCAACGAGTAGTAATAGGCATAGGGCGAGAGTGA
droVir3 scaffold_12970:9427888-9427993 - dvi-mir-9543a Known_mirbase CTCTCGGGACGTCC-AGTTTTTGGTCTACCTTTGACCCAATGCCACGTGCAACCTGAGGTGAACATGTAATATATAACTGTTTACGATATGTTAAATATTGCTTGTT-----------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
TTGTCTGTGTGTTCGAGCCTATGCACTACTCT---CCCAGC-TCGTGGTCAGTTGGGAGTTAGCAAGCAATACCTAACTGTATACGATTTGTTATATATTGCTCGCTATTCCAAAATTGCCATGCAGCAATATCAACGAGTAGTAATAGGCATAGGGCGAGAGTGASizeHit CountTotal NormTotalM046

Female-body
V041

Embryo
V049

Head
V056

Head
M060

Embryo
V110

Male-body
..............................................................................................TATATTGCTCGCTATTCCAAA...................................................211158.00158120113141
..............................................................................................TATATTGCTCGCTATTCCAAAA..................................................221132.00132811010112
..............................................................................................TATATTGCTCGCTATTCCAA....................................................201110.0011012123290
.............................................................................................ATATATTGCTCGCTATTCCAAA...................................................22133.00330000033
..............................................................................................TATATTGCTCGCTATTCCAAAAA.................................................23126.00264011020
.............................................................................................ATATATTGCTCGCTATTCCAA....................................................21121.00210010020
..............................................................................................TATATTGCTCGCTATTCCA.....................................................19114.0014511205
.............................................................................................ATATATTGCTCGCTATTCCA.....................................................20113.00132010010
..............................................................................................TATATTGCTCGCTATTCCAAT...................................................21113.00130000013
............................................................................................TATATATTGCTCGCTATTCCAA....................................................22111.0011110009
............................................................................................TATATATTGCTCGCTATTCCA.....................................................21110.0010100018
.............................................................................................ATATATTGCTCGCTATTCCATC...................................................2219.009100008
.............................................................................................ATATATTGCTCGCTATTCCAAT...................................................2218.008000008
..............................................................................................TATATTGCTCGCTATTCCAAC...................................................2117.007001006
..............................CT---CCCAGC-TCGTGGTCAGTT................................................................................................................2016.006001014
.............................................................................................ATATATTGCTCGCTATTCCAAC...................................................2216.006000006
..............................................................................................TATATTGCTCGCTATTCCATC...................................................2116.006000006
............................................................................................TATATATTGCTCGCTATTCC......................................................2014.004000004
.............................................................................................ATATATTGCTCGCTATTCCACC...................................................2214.004000103
..............................................................................................TATATTGCTCGCTATTCCAC....................................................2013.003100002
.............................................................................................ATATATTGCTCGCTATTCCAC....................................................2113.003000003
......................................................GGGAGTTAGCAAGCAATACCTA..........................................................................................2213.003200010
..............................................................................................TATATTGCTCGCTATTCCAAAAT.................................................2313.003000003
............................................................................................TATATATTGCTCGCTATTCCAAA...................................................2313.003000003
..............................................................................................TATATTGCTCGCTATTCCAT....................................................2012.002000002
..............................................................................................TATATTGCTCGCTATTCCAAAAAAA...............................................2512.002000002
..............................................................................................TATATTGCTCGCTATTCCAAAC..................................................2212.002000011
............................................................................................TATATATTGCTCGCTATTCCAT....................................................2212.002000002
..............................................................................................TATATTGCTCGCTATTCCACC...................................................2112.002000002
..............................................................................................TATATTGCTCGCTATTCCATT...................................................2111.001001000
.............................................................................................ATATATTGCTCGCTATTCCATT...................................................2211.001000001
..............................................................................................TATATTGCTCGCTATTCCAAG...................................................2111.001000001
......................................................GGGAGTTAGCAAGCAATACC............................................................................................2011.001000010
...........................ACTCT---CCCAGC-TCGTGGTCAGTT................................................................................................................2311.001000001
.............................................................................................ATATATTGCTCGCTATTCCAAAT..................................................2311.001000001
............................................................................................TATATATTGCTCGCTATTCCAAC...................................................2311.001000001
.............................................................................................ATATATTGCTCGCTATTCCAAAAA.................................................2411.001000001
................................................................................................TATTGCTCGCTATTCCAAAA..................................................2011.001100000
.............................................................................................ATATATTGCTCGCTATTCCC.....................................................2011.001000001
..............................................................................................TATATTGCTCGCTATTCCAAAT..................................................2211.001000001
..............................................................................................TATATTGCTCGCTATTCCAAATC.................................................2311.001000001
.............................................................................................ATATATTGCTCGCTATTCCT.....................................................2011.001000001
..............................................................................................TATATTGCTCGCTATTCCAAATA.................................................2311.001000001
............................................................................................TATATATTGCTCGCTATTCCC.....................................................2111.001000001
............................................................................................TATATATTGCTCGCTATTCCATC...................................................2311.001000001
..............................................................................................TATATTGCTCGCTATTCCAAAAAA................................................2411.001000001
............................................................................................TATATATTGCTCGCTATTCCATCT..................................................2420.501000001
..............................................................................................TATATTGCTCGCTATTCCATTC..................................................2230.331000001
droVir3
CTCTCGGGACGTCC-AGTTTTTGGTCTACCTTTGACCCAATGCCACGTGCAACCTGAGGTGAACATGTAATATATAACTGTTTACGATATGTTAAATATTGCTTGTT-----------------------------------------------------------SizeHit CountTotal NormTotalM027

Male-body
M028

Head
M047

Female-body
M061

Embryo
SRR060654

Ovary
SRR060655

Testis
SRR060656

Ovary
SRR060657

Testis
SRR060658

Ovary
SRR060659

Testis
SRR060660

Ovary
SRR060661

Embryo
SRR060662

Embryo
SRR060663

Embryo
SRR060664

Male-body
SRR060665

Female-body
SRR060666

Male-body
SRR060667

Female-body
SRR060668

Male-body
SRR060669

Female-body
SRR060670

Testis
SRR060671

Male-body
SRR060672

Female-body
SRR060673

Ovary
SRR060674

Ovary
SRR060675

Ovary
SRR060676

Ovary
SRR060677

Ovary
SRR060678

Testis
SRR060679

Testis
SRR060680

Testis
SRR060681

Testis
SRR060682

Embryo
SRR060683

Testis
SRR060684

Embryo
SRR060685

Embryo
SRR060686

Embryo
SRR060687

Embryo
SRR060688

Ovary
SRR060689

Testis
SRR1106712

embryo_0-2h
SRR1106713

embryo_0-2h
SRR1106714

embryo_2-4h
SRR1106715

embryo_4-6h
SRR1106716

embryo_4-6h
SRR1106717

embryo_6-8h
SRR1106718

embryo_6-8h
SRR1106719

embryo_8-10h
SRR1106720

embryo_8-10h
SRR1106721

embryo_10-12h
SRR1106722

embryo_10-12h
SRR1106723

embryo_12-14h
SRR1106724

embryo_12-14h
SRR1106725

embryo_14-16h
SRR1106726

embryo_14-16h
SRR1106727

larvae
SRR1106728

larvae
SRR1106729

mixed whole adult body
SRR1106730

embryo_16-30h
V047

Embryo
V053

Head
V116

Male-body
GSM1528803

follicle cells
SRR2096013

Ovary_Strain_9_oxidized
SRR2096014

Ovary_Strain_160_oxidized
SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers
SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers
SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers
SRR2096055

Ovary_Min_43
SRR2096056

Ovary_Min_46
SRR2096057

Ovary_Min_50
SRR2096058

Ovary_Min_98
SRR2096059

Ovary_Min_164
SRR2096060

Ovary_Min_193
SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers
SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers
SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers
SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers
SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
......................................................TGAGGTGAACATGTAATATATAA.........................................................................................2311629.00162920300101301800000101008100101349427516660808100005000000000000000000000500020020240200002
......................................................TGAGGTGAACATGTAATATAT...........................................................................................2111181.00118130101021101200000001008100115136222811537713100004000000000000000002000300011316615232024
......................................................TGAGGTGAACATGTAATATATA..........................................................................................221428.004280020000519000000100040000010149933011801000001000000000000000001000200000000110130022
......................................................TGAGGTGAACATGTAATATATAAA........................................................................................241254.0025400000003060000000000000000008738248200000002000000000000000000000200001310201010001
......................................................TGAGGTGAACATGTAATATA............................................................................................20142.00420000000001000000000000000000141051100000000000000000000000000000000010000000000000
......................................................TGAGGTGAACATGTAATATATC..........................................................................................22128.00280010000000000000000000000000861300000000000000000000000001000000000030220100000
......................................................TGAGGTGAACATGTAATATATAAAA.......................................................................................25121.00210010000000000000000000000000821510000000000000000000000000000000000200000010000
......................................................TGAGGTGAACATGTAATAT.............................................................................................19120.00200000000000000000000000000000734600000000000000000000000000000000000000000000000
......................................................TGAGGTGAACATGTAATATAA...........................................................................................21117.00170000000000000000000000000000373400000000000000000000000000000000000000000000000
......................................................TGAGGTGAACATGTAATATATAG.........................................................................................23112.00120000000200000000000000000000421300000000000000000000000000000000000000000000000
.....................................................CTGAGGTGAACATGTAATATATAA.........................................................................................24110.00100000000000000000000000000000412300000000000000000000000000000000000000000000000
......................................................TGAGGTGAACATGTAATATATCC.........................................................................................23110.00100010000000000000000000000000221300000001000000000000000000000000000000000000000
......................................................TGAGGTGAACATGTAATATATAAG........................................................................................2419.0090000000001000000000000000000011500000001000000000000000000000000000000000000000
......................................................TGAGGTGAACATGTAATATATAT.........................................................................................2319.0090000000000000000000000000000420102000000000000000000000000000000000000000000000
......................................................TGAGGTGAACATGTAATATATAC.........................................................................................2318.0080000000000000000000000000000122300000000000000000000000000000000000000000000000
.....................................................CTGAGGTGAACATGTAATATAT...........................................................................................2218.0080000000000000000000000000010221200000000000000000000000000000000000000000000000
......................................................TGAGGTGAACATGTAATATATAACC.......................................................................................2517.0070000000000000000000000000000420100000000000000000000000000000000000000000000000
......................................................TGAGGTGAACATGTAATATATAAC........................................................................................2416.0060000000000000000000000000000230000000000000000000000000000000000001000000000000
.......................................................GAGGTGAACATGTAATATAT...........................................................................................2015.0050020000000000000000000000000100100000000000000000000000001000000000000000000000
......................................................TGAGGTGAACATGTAATATAC...........................................................................................2115.0050000000000000000000000000000030200000000000000000000000000000000000000000000000
......................................................TGAGGTGAACATGTAATATATAAT........................................................................................2414.0040000000000000000000000000000120100000000000000000000000000000000000000000000000
.......................................................GAGGTGAACATGTAATATATAA.........................................................................................2214.0040000000000000000000000000000101200000000000000000000000000000000000000000000000
......................................................TGAGGTGAACATGTAATA..............................................................................................1814.0041000000000000000000000000000200100000000000000000000000000000000000000000000000
.................................GACCCAATGCCACGTGCAACC................................................................................................................2114.0040000000000000000000000000000120100000000000000000000000000000000000000000000000
...............................TTGACCCAATGCCACGTGCAACC................................................................................................................2314.0040000000000000000000000000000200200000000000000000000000000000000000000000000000
........................................................AGGTGAACATGTAATATATAA.........................................................................................2113.0030000000000000000000000000000030000000000000000000000000000000000000000000000000
.......................................................GAGGTGAACATGTAATATATAAC........................................................................................2312.0020000000000000000000000000000010100000000000000000000000000000000000000000000000
..................................ACCCAATGCCACGTGCAACC................................................................................................................2012.0020000000000000000000000000000100100000000000000000000000000000000000000000000000
......................................................TGAGGTGAACATGTAATATATAACTGT.....................................................................................2712.0020000000000000000000000000000000200000000000000000000000000000000000000000000000
......................................................TGAGGTGAACATGTAATATATT..........................................................................................2211.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
......................................................TGAGGTGAACATGTAATATC............................................................................................2011.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
......................................................TGAGGTGAACATGTAATATATAAAC.......................................................................................2511.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
...........................................................TGAACATGTAATATATAA.........................................................................................1811.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
.....................................................CTGAGGTGAACATGTAATATATA..........................................................................................2311.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
......................................................TGAGGTGAACATGTAATATATAAAAA......................................................................................2611.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
......................................................TGAGGTGAACATGTAATATATAACTC......................................................................................2611.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
..........................................................GTGAACATGTAATATATAA.........................................................................................1911.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................TGAGGTGAACATGTAATATATATAA.......................................................................................2511.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
......................................................TGAGGTGAACATGTAATAA.............................................................................................1911.0010000000000000000000000000000010000000000000000000000000000000000000000000000000
...........................................................TGAACATGTAATATATAAA........................................................................................1920.5010000000000000000000000000000000000000001000000000000000000000000000000000000000

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