ID:

dmo_2352

 Coordinate:

scaffold_6680:4772431-4772514 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-0.8 -0.4 0.0

Flybase annnotation

CDS [Dmoj\GI12929-cds]; CDS [Dmoj\GI12929-cds]; exon [dmoj_GLEANR_12895:10]; exon [dmoj_GLEANR_12895:9]; intron [Dmoj\GI12929-in]

Repeatable elements

NameClassFamilyStrand
(CAA)nSimple_repeatSimple_repeat+
mature
star
  1. scaffold_6473:2217455-2217477 +
  2. scaffold_6473:4081953-4081975 +
  3. scaffold_6473:7430038-7430060 +
  4. scaffold_6473:10364003-10364025 +
  5. scaffold_6473:14156236-14156258 +
  6. scaffold_6473:14849002-14849024 +
  7. scaffold_6473:15315268-15315290 +
  8. scaffold_6496:469591-469613 +
  9. scaffold_6496:896081-896103 +
  10. dmo_1123  scaffold_6496:13328572-13328594 +
  11. scaffold_6500:1403023-1403045 +
  12. scaffold_6540:2968049-2968071 +
  13. scaffold_6540:14213123-14213145 +
  14. scaffold_6540:14739794-14739816 +
  15. scaffold_6540:15224771-15224793 +
  16. scaffold_6540:17409212-17409234 +
  17. scaffold_6540:25930010-25930032 +
  18. dmo_2352  scaffold_6680:4772445-4772467 +
  19. scaffold_6680:12876588-12876610 +
  20. scaffold_6680:20654007-20654029 +

Sense Strand Reads

##################################################------------------------------------------------------------------------------------##################################################
GGCGACAGTCCGCCGCAATCGCTGCAATCTGAGCTGCCAGTGGCTCCACAGTCGCCCACGCCCTGCAACAACAACAGCAACAGCAACATCAACAACAACAACAACAGCAGCAGCAACCACATTAACAACAACAGCAACAACAACATCAACAACAATAGCAATAGCAATTGCCATCACACCCACA
****************************************************************..........................................((....))........************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V041
embryo
 V056
head
.........................................................................................................................................................AATAGCAATAGCAATTGCCATCACACC.... 27 0 1 1.00 1 1 0 0 0
..............................................................................................ACAACAACAACAGCAGCAGCAACCACAT.............................................................. 28 0 1 1.00 1 1 0 0 0
......................................................................................................................ACATTAACAACAACAGCAACAACAACA....................................... 27 0 1 1.00 1 1 0 0 0
......................TGCAATCTGAGCTGCCAGTGG............................................................................................................................................. 21 0 1 1.00 1 1 0 0 0
..............................................CACAGTCGCCCACGCCCTGCA..................................................................................................................... 21 0 1 1.00 1 1 0 0 0
........................................................................................................CAGCAGCAGCAACCACATTAACAACAACA................................................... 29 0 1 1.00 1 1 0 0 0
...................CGCTGCAATCTGAGCTGCCA................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0
......................................................................................................................ACATTAACAACAACAGCAACAACA.......................................... 24 0 1 1.00 1 1 0 0 0
...............................................ACAGTCGCCCACGCCCTGCAACA.................................................................................................................. 23 0 1 1.00 1 1 0 0 0
.......................................................................................................ACAGCAGCAGCAACCACATTAACA......................................................... 24 0 1 1.00 1 1 0 0 0
....................................................................................................ACAACAGCAGCAGCAACCACA............................................................... 21 0 2 0.50 1 1 0 0 0
..................................................................................................................................ACAGCAACAACAACATCAACAACA.............................. 24 0 6 0.17 1 1 0 0 0
...............................................................................................................................ACAACAGCAACAACAACATCAACA................................. 24 0 7 0.14 1 1 0 0 0
..CGACGATCCGCCTCAATCGC.................................................................................................................................................................. 20 3 7 0.14 1 1 0 0 0
..........................................................................CAGCAACAGCAACATCAACAACA....................................................................................... 23 0 8 0.13 1 1 0 0 0
.........................................................................................................................TTAACAACAACAGCAACAACA.......................................... 21 0 10 0.10 1 1 0 0 0
.................................................................................................................................AACAGCAACAACAACATCAACA................................. 22 0 16 0.06 1 1 0 0 0
........................................................................................TCAACAACAACAACAACAGCAGC......................................................................... 23 0 17 0.06 1 1 0 0 0
.................................................................................................................................AACAGCAACAACAACATCAAC.................................. 21 0 18 0.06 1 0 1 0 0
....................................................................................................ACAACAGCAGCAGCAACC.................................................................. 18 0 18 0.06 1 1 0 0 0
......................................................................................................................................CAACAACAACATCAACAACA.............................. 20 0 20 0.05 1 0 1 0 0
..................................................................................................................................................AAACAACAATAGCAATAGCA.................. 20 1 20 0.05 1 1 0 0 0
.................................................................................................ACAACAACAGCAGCAGCAA.................................................................... 19 0 20 0.05 1 1 0 0 0
...........................................................................................ACAACAACAACAACAGCAG.......................................................................... 19 0 20 0.05 1 0 1 0 0
.GAGACGGTCCGCCGCA....................................................................................................................................................................... 16 2 20 0.05 1 0 0 0 1
................................................................GCAACAACAACAGCAACAGCAAC................................................................................................. 23 0 20 0.05 1 0 1 0 0
..................................................................................GCAACATCAACAACAACAACAA................................................................................ 22 0 20 0.05 1 0 1 0 0
........................................................................................................CAGCAGCAGCTATCACATT............................................................. 19 2 20 0.05 1 1 0 0 0
..................................................................AACAACAACAGCAACAGCA................................................................................................... 19 0 20 0.05 1 0 0 1 0
................................................................................................AACAACAACAGCAGCAGCAAC................................................................... 21 0 20 0.05 1 0 1 0 0
..................................................................................GCAACATCAACAACAACAACAACA.............................................................................. 24 0 20 0.05 1 1 0 0 0

Anti-sense strand reads

CCGCTGTCAGGCGGCGTTAGCGACGTTAGACTCGACGGTCACCGAGGTGTCAGCGGGTGCGGGACGTTGTTGTTGTCGTTGTCGTTGTAGTTGTTGTTGTTGTTGTCGTCGTCGTTGGTGTAATTGTTGTTGTCGTTGTTGTTGTAGTTGTTGTTATCGTTATCGTTAACGGTAGTGTGGGTGT
**************************************************************..........................................((....))........**************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V041
embryo
..........................................................................................................CGTCGTCGATAGTGTAATTTTTG....................................................... 23 3 1 1.00 1 1 0
..................................................................................................................................TGTCGTTGTTGTTGTAGTTG.................................. 20 0 19 0.05 1 1 0
............................................................................................................................TGGTGTTGGCGTTGTTGTTGTAGTTG.................................. 26 2 20 0.05 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6680:4772381-4772564 + dmo_2352 GGCGACAG-----------TCCGCC------------------------------------GCAATCGCTGCAATCTGAGCT----GCCAGTG----------------------------GCTCCAC-----------------------AGTCGC------------C-CACGCC------------------CTGCAACAA---CAACAGCAACAG------------CA------------ACATCAA------------------------CAACAACAACAACAGCAGCAGC--------AA---------------CCACATTAACA---ACAACA---GCAA---CAACAACATCAA---------------CAACAAT---AGCAATAGCAATTGCCATCAC--------------------------ACCCACA
droVir3 scaffold_13049:6458047-6458209 + dvi_18664 GGCGACAG-----------CCCGCC------------------------------------GCAGTCATTGCAATCTGAGCT----GCC------------------------------------------------------------------------------------------------------------------------------GCAGCCGCAGCCACAGCT------------ACAGCTA------------------------CAGCTACAGCCACAGCCTCTGCCTGCGCCCAC---------------GCCCTACAACA---TCATCA---GCAA---CAATATCCAGAA---------------CAACAAT---AGCAACAACAATAGCCATCAC--------------------------ACCCACA
droGri2 scaffold_15110:15546621-15546795 + AGCAACAA-----------CC-GCA------------------------------------GCAACAGCAACAACCACAGCA----GCAGCAA----------------------------CA--------------------------AC------------------------C----------ACAGCAGCA--GCAACAA---CAACATCAACAG------------CA------------GCAGCA------------------------ACAACAACATCCACAGCAGCAGC--------CA---------------CAACAACATCC---ACAGCA---GCAG---CCACAACAACAT---------------CCACAGC---AGCAGCAGCAACAACCCACAC--------------------------AACCATT
droWil2 scf2_1100000004968:2076158-2076362 + AGCAACAG-----------CA-GCA------------------------------------ACAATGGCAGCAACTGCAGCA----GCAACAA----------------------------CA-----ACAACAGCAGCAACAACAACAG---------------------------------------------------------------CAGCAG------------CA------------ACAAC------------------------AGCAACAGCAACAACAACTGCAGC--------AGCAACAACAACAGCAGCAGCAACAACA---GCATCA---GCAA---CAGCAACAGCAG---------------CAACAAT---GGCAGCA---GCA---ACAACAGCAACATCAACTGC--AGCAGCAACAGCAACA
dp5 XR_group6:9122361-9122520 + AGCGGCAG-----------TC-GCC------------------------------------AGAACAACTGGAAGGCCTAAG----GCCAGAA----------------------------AA--------------------------AC------------------------C----------CCAGCAACG--CCAACAA---CAACAGCAACAG------------CA------------GCAGCA------------------------ACAACAACAACAACAGGAACAAC--------AA---------------CA---------------------ACAG---CAACAACAACAA---------------CAACAAC---AGCAAAAACAACAACAGCAAC--------------------------AACAACT
droPer2 scaffold_5:813610-813788 - GGCGGCAG-----------CT-CCC---A--GCAAT--------------------------CTGCAAGTGCGGCA-CAGCT----CCAA---------------------------------------------------------------------------------------------------------AAGCAGCAG---CAACAGCAGCAG------------CA------------GCAACAA------------------------CAGCAGCAACAGCAGCAGCAGC--------AA---------------CAACAACAGCA---GCAGCAACAGCAGCAGCAACAGCAGCAG---------------CAACAACAGCAGCAGCA---GCA---ACAGC---AG--TCGATGGCAG---------GGCCACA
droAna3 scaffold_13117:3453184-3453359 + AGCAACAG-----------CA-AC------------------------------------AGCAGCAGCAACAGCAATCGCA----GCTAGTA----------------------------GGGCA------------------------------------------------------------GCAGCAGCA--GCAGCAG---C------------------------A------------ACAACAA------------------------CAGTCACAACAACAGCAGCAAC--------AA---------------TCGCAGCAGCA---ACAGCA---ACAG---CAACAACAGCAG---------------CAGCAGC---------AGCAACAACTATCG-AGCGAT----TCTGT--TGCAGCAGCAGCAGCA
droBip1 scf7180000395553:7744-7936 - AGCAACAG-----------CA-AC------------------------------------AGCAGCAGGCACAGCAACAGCA----GCAGGCA----------------------------CAGCA--AC---------------AGCA---G------------------CAGGCA------------------CAGCAGCCG---C------AACAG------------CA------------CCACC------------------------CACAACAACAACAACAACAACAGC--------AGCAATCACAACAACATAAGCAACAACAGCAGCAACT---TCTC------CAACAAAAG---------------CAACAGC---AGCAGCA---GCA---ACAGCAA---------CATCAG--------GCCCTGCA
droKik1 scf7180000302685:806038-806209 + AGCAATAG-----------CA-AC------------------------------------AGCAACAGCTACAGCAACAGCA----ACACTG---------------------------------------------------------A------C------------------ACCAA---------------CAGCAACAC---CAACAACAGCAG------------CA---------CCAACACCAA------------------------CAGCAACAGCAACAGCAACAAC--------AA---------------CAACACCAACA---ATAATA---ACAA---CAAGAACAACAC---------------CAACAGC---AACACCAACACTAACAACAAC--------------------------ACCAACA
droFic1 scf7180000453829:1092987-1093158 + AGCAGCAG-----------CA-GC------------------------------------AACGGCAGCAACTGCAGCAGCA----GCAACT---------------------------------------------------------G------------------------------------------------CAGCAG---CAACAACAGCAG------------CAGCAACAACAGCAGCAACA------------------------ACAGCAGCAGCAACAGCAACAGC--------AG---------------CAACTACAACA---ACAACA---GCAG---CAACAGCAGCAG---------------CAACAAC---AGCAACAGCAGCAACTACAAC--------------------------AACAACA
droEle1 scf7180000491238:690900-691082 + GGCGACAG-----------CG-GC------------------------------------GGCTGCTGCGGCTGCTGTTGAGAGTCGCTTGTTGGGTTTGCAGCA------CCAG--------------------------------------------------------------------------------CAACAGCAACAACAGCAACATCAGCAGCAACAACAGCA------------ACATCA------------------------GCAGCAA------CAACAGC-----------------------------A---GCAGCA---ACAACA---GCAA---CAACAACAGCAA---------------CACCAAC---AGCAACATCAGCAGCAGCAGC--------------------------ACCTACA
droRho1 scf7180000766112:37689-37862 + ATTAACAAGTCAAACGCAATCCC-------------------------------------------CCCTGCAATCCCAGCA----CCAAACGCAGCC----GCAGCAACAACATC-----------------AGCAACAACAACAGCAG---------------------------------------------------------------CAGCAG------------CA------------ACAAC------------------------AACAACAGCAACAACAACAAC--------------------------------------A---GCAGCA---ACAA---CAACAGCAGCAA---------------CAACAAC---AGCAGCAGCAACAACAACAAC--------------------------AGCAGCA
droBia1 scf7180000302297:352847-353029 + A----CAG-----------CC-CCAGCAA------T---------CATCTC---------AACAGCAGATCCAGCA--------------------------------------------GCCTCAGC-----------------------ATCAAC------------------CCCAGCATCAA---------CCGCAACAG---CAACCGCAACAG------------CA------------ACAACAA------------------------CAACAGCAACAACAGCAACAAC--------AA---------------CAACAACAGCA---ACAGCA---ACAG---CAACAGCAGCAA---------------CAACAGC---AGCAACAGCAGCAACAACAGC--------------------------AACAGCA
droTak1 scf7180000415272:246589-246768 + GGCAACTT-----------TCTGCT------------------------------------GCAGCAGCAA-----------------------------------------CGCCAGCAGCA-----------------ACAACAGCAGCTTCTACAACAATTTACGCTGCAGG--------------------CGGCAGCCG---CA-------CA---------------------------GCAGCAA------------------------CAACAACAACAACAGCAGCAGC--------AG---------------CAACACCAGCA---GCAGCA---GCAG---CAACAACAACAG---------------CA--------------A---GCA---ACAAG---TA--GCAATGCCTT------AACCAAGACA
droEug1 scf7180000409466:3032837-3033015 - AGCAACAG-----------CA-AC------------------------------------ACTAACACTAGCAACTTTAGCA----GCCAGCAAGGCTAGCAAAA------CCACA-----------------------------AG------------------------------------------------CAGCAGCAG---CAGCAGCAGCAG------------CA------------GCAACA------------------------TCAACAGCGGCAACAGAAACAGC--------AA---------------CAACAACAACA---ACCACA---ACAA---CAGCAGCGGCAG---------------CAACACT---AGCA---AAAGCAGCAATAAC--------------------------AGAAACA
dm3 chrX:21204285-21204465 - AGCAACAG-----------CA-GCA---------ACCACCGCCCCCCTCGC---------AGCAGCAGCAACAGCT--------------------------------------------GCATCAGC-----------------------TCAAGT------------------CC------------------CCGCAACAG---CACCAGCAACAG------------CT------------GCAGCAG------------------------CACCAGCAGCAGCAGCAGCAGC--------AA---------------CACCACCAGCA---GCAACA---TCAC------CAGCAGCAA---------------CACCAGC---AGCAACAGCAGCAACACCATC--------------------------AGCAGCA
droSim2 x:3498536-3498710 - dsi_16930 TGCACTAC---------GATCCTCACCAGGA---------------GCTGC---------AGTTCGAGCAGCATCAGCCGCA----CCAG---------------------------------------------------------------------------------------------------------TCGCATCAG---CAGCATCAGCAG------------CA------------GCAACA------------------------TCAGCAGCAACAACATCAGCAGC--------AA---------------CATCAGCAGCA---GCAGCA---GCTG---CAACAGCAACAT---------------CAGCAAC---ATCAGCAGCTGCAGCATCAGC--------------------------AGCAGCA
droSec2 scaffold_4:2908064-2908256 + AGCATCAG-----------CC-GCACCAG------T------------CGCATCAGCAACATCAGCAGCAGCAGCTGCAGCA----TCA----------------------GCAGC-----------------------------AGCAG---------------------------------------------CAGCTGCAG---CATC---AGCAG------------CAGCA---------GCAACATCAGCAG------------------CAACAAAATCAGCAGCAGCAGC--------AG---------------CTACAACAGCA---ACATCA---GCAG---CAGCAACAGCTG---------------CAGCATC---AGCAGCAGCATCAGCAGCAAC--------------------------ATCAGCA
droYak3 3R:26053098-26053278 - TGCAACAG-----------CA-TC------------------------------------AACTGCAACCGCAGCAAAAGTT----ACAAGT----------------------------GCAGCAGC-----------------------AGCAGC------------------CG------------------CGGAAGACA---C------TTCAG------------CAACT---------ACCCCAAACGCAACAACAACAGCAGCAACATCAACTGCAACAACAGCAAC--------------------------------------------AGCA---ACTG---CAACAACATCAG---------------CAACTTC---AACTGCAACAGCAAGTGCAGC--------------------------AAATGCA
droEre2 scaffold_4784:3586565-3586733 + AGCAGCAT-----------CA-GC------------------------------------AGCAGCAGCAGCAGCATCAACA----GCAGCA---------------------------------------------------------G---------------------------------------------------------CAGCAGCAACAG------------CA------------GCAACAG---CAGCAACAGC---------AGCAGCAGCAACAACAGCAACAGC--------AG------------------------------CAGCA---GCAA---CAGCAGCAGCATCAACAGCAACAGCAGCAACAGC---AACAGCAGCAGCAGTTGCAGC--------------------------CACAACA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
GGCGACAG-----------TCCGCC------------------------------------GCAATCGCTGCAATCTGAGCT----GCCAGTG----------------------------GCTCCAC-----------------------AGTCGC------------C-CACGCC------------------CTGCAACAA---CAACAGCAACAG------------CA------------ACATCAA------------------------CAACAACAACAACAGCAGCAGC--------AA---------------CCACATTAACA---ACAACA---GCAA---CAACAACATCAA---------------CAACAAT---AGCAATAGCAATTGCCATCAC--------------------------ACCCACASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................................................................................................................................................................................................................................................................................................................................................................................................AAT---AGCAATAGCAATTGCCATCAC--------------------------ACC....2711.001100000
......................................................................................................................................................................................................................................................................................ACAACAACAACAGCAGCAGC--------AA---------------CCACAT...................................................................................................................2811.001100000
.....................................................................................................................................................................................................................................................................................................................................ACATTAACA---ACAACA---GCAA---CAACAACA...................................................................................2711.001100000
.....................................................................TGCAATCTGAGCT----GCCAGTG----------------------------G..................................................................................................................................................................................................................................................................................................................................2111.001100000
.............................................................................................................................CAC-----------------------AGTCGC------------C-CACGCC------------------CTGCA....................................................................................................................................................................................................................................................2111.001100000
................................................................................................................................................................................................................................................................................................CAGCAGCAGC--------AA---------------CCACATTAACA---ACAACA---..................................................................................................2911.001100000
..................................................................CGCTGCAATCTGAGCT----GCCA..................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.....................................................................................................................................................................................................................................................................................................................................ACATTAACA---ACAACA---GCAA---CAACA......................................................................................2411.001100000
..............................................................................................................................AC-----------------------AGTCGC------------C-CACGCC------------------CTGCAACA.................................................................................................................................................................................................................................................2311.001100000
...............................................................................................................................................................................................................................................................................................ACAGCAGCAGC--------AA---------------CCACATTAACA---...........................................................................................................2411.001100000
............................................................................................................................................................................................................................................................................................ACAACAGCAGCAGC--------AA---------------CCACA....................................................................................................................2120.501100000
....................................................................................................................................................................................................................................................................................................................................................ACA---GCAA---CAACAACATCAA---------------CAACA...........................................................2460.171100000
.................................................................................................................................................................................................................................................................................................................................................ACAACA---GCAA---CAACAACATCAA---------------CA..............................................................2470.141100000
..................................................................................................................................................................................................................CAGCAACAG------------CA------------ACATCAA------------------------CAACA...................................................................................................................................................................2380.131100000
........................................................................................................................................................................................................................................................................................................................................TTAACA---ACAACA---GCAA---CAACA......................................................................................21100.101100000
...................................................................................................................................................................................................................................................................................................................................................AACA---GCAA---CAACAACATCAA---------------CA..............................................................22160.061100000
........................................................................................................................................................................................................................................................TCAA------------------------CAACAACAACAACAGCAGC.....................................................................................................................................................23170.061100000
...................................................................................................................................................................................................................................................................................................................................................AACA---GCAA---CAACAACATCAA---------------C...............................................................21180.061000010
............................................................................................................................................................................................................................................................................................ACAACAGCAGCAGC--------AA---------------CC.......................................................................................................................18180.061100000
...........................................................................................................................................................................................................................................................................................................................................................CAA---CAACAACATCAA---------------CAACA...........................................................20200.051000010
.........................................................................................................................................................................................................................................................................................ACAACAACAGCAGCAGC--------AA---------------.........................................................................................................................19200.051100000
...........................................................................................................................................................................................................................................................A------------------------CAACAACAACAACAGCAG......................................................................................................................................................19200.051000010
.....................................................................................................................................................................................................GCAACAA---CAACAGCAACAG------------CA------------AC.....................................................................................................................................................................................................23200.051000010
..........................................................................................................................................................................................................................G------------CA------------ACATCAA------------------------CAACAACAACAA............................................................................................................................................................22200.051000010
.......................................................................................................................................................................................................AACAA---CAACAGCAACAG------------CA------------.......................................................................................................................................................................................................19200.051010000
........................................................................................................................................................................................................................................................................................AACAACAACAGCAGCAGC--------AA---------------C........................................................................................................................21200.051000010
..........................................................................................................................................................................................................................G------------CA------------ACATCAA------------------------CAACAACAACAACA..........................................................................................................................................................24200.051100000
droVir3
GGCGACAG-----------CCCGCC------------------------------------GCAGTCATTGCAATCTGAGCT----GCC------------------------------------------------------------------------------------------------------------------------------GCAGCCGCAGCCACAGCT------------ACAGCTA------------------------CAGCTACAGCCACAGCCTCTGCCTGCGCCCAC---------------GCCCTACAACA---TCATCA---GCAA---CAATATCCAGAA---------------CAACAAT---AGCAACAACAATAGCCATCAC--------------------------ACCCACASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................CGCC------------------------------------GCAGTCATTGCAATC................................................................................................................................................................................................................................................................................................................................................................................1914.004003000000000000000000000001000000000000000000000000000000000000
.........................................................................ATCTGAGCT----GCC------------------------------------------------------------------------------------------------------------------------------GCAGCCGC.............................................................................................................................................................................................................................2012.002000000000000000000100010000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................AT---AGCAACAACAATAGCCAT....................................2012.002001000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................TATCCAGAA---------------CAACAAT---AGCAAC................................................2211.001000000000000000000000000000000100000000000000000000000000000000
...........................................................................CTGAGCT----GCC------------------------------------------------------------------------------------------------------------------------------GCAGCCGCAGCC.........................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................GCTA------------------------CAGCTACAGCCACAGCCTC.....................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................ACAGCCTCTGCCTGCGCCCAC---------------GCCC.....................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................TCATCA---GCAA---CAATATCCA..................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................ATCTGAGCT----GCC------------------------------------------------------------------------------------------------------------------------------GCAGCCGCAGCCACA......................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................AAT---AGCAACAACAATAGCC......................................1911.001000000000000001000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................CAC---------------GCCCTACAACA---TCATC......................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................AAT---AGCAACAACAATAGCCATC...................................2211.001000000000000000010000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................ACA---TCATCA---GCAA---CAATATCCAGAA---------------CA..............................................................2711.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................AATATCCAGAA---------------CAACAAT---AGCA..................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................ATCTGAGCT----GCC------------------------------------------------------------------------------------------------------------------------------GCAGCCGCAGCC.........................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................TGCCTGCGCCCAC---------------GCCCT....................................................................................................................1811.001000000000000000010000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................CAGAA---------------CAACAAT---AGCAACAACAATAG........................................2611.001001000000000000000000000000000000000000000000000000000000000000
........................C------------------------------------GCAGTCATTGCAATCTGAGCT----GCC------------------------------------------------------------------------------------------------------------------------------GC...................................................................................................................................................................................................................................2711.001000000000000000000100000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................C---------------GCCCTACAACA---TCATCA---GCAA---C..........................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................AACAAT---AGCAACAACAATAGCCATCAC--------------------------A......2811.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................CTACAGCCACAGCCTCTGCCTG...............................................................................................................................................2211.001000000000000000100000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................ATCCAGAA---------------CAACAAT---AGCAAC................................................2111.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................CAGCCTCTGCCTGCGCCCAC---------------GCCC.....................................................................................................................2411.001000000000000000000010000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................CAATATCCAGAA---------------CAACAAT---AGCAACA...............................................2611.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................GCTA------------------------CAGCTACAGCCACAGCCTCTGCC.................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
......................GCC------------------------------------GCAGTCATTGCAATC................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................TGCAATCTGAGCT----GCC------------------------------------------------------------------------------------------------------------------------------GCA..................................................................................................................................................................................................................................1911.001000000000000000000010000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................ATATCCAGAA---------------CAACAAT---AGCAACAACAAT..........................................2911.001001000000000000000000000000000000000000000000000000000000000000
............................................................................TGAGCT----GCC------------------------------------------------------------------------------------------------------------------------------GCAGCCGCAGCCACAGCT------------.......................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................CAA---CAATATCCAGAA---------------CAACAAT---AGCAA.................................................2711.001000000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TACAACA---TCATCA---GCAA---CAATATCCA..................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................AATATCCAGAA---------------CAACAAT---AGCAACA...............................................2511.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................ATATCCAGAA---------------CAACAAT---AGCAACAACA............................................2711.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................GCAGCCACAGCT------------ACAGCTA------------------------C.......................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................CAATCTGAGCT----GCC------------------------------------------------------------------------------------------------------------------------------GCAGCCGC.............................................................................................................................................................................................................................2211.001000000000000001000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................GCCACAGCCTCTGCCTGCGCCC..........................................................................................................................................2211.001010000000000000000000000000000000000000000000000000000000000000
....................................................................TTGCAATCTGAGCT----GCC------------------------------------------------------------------------------------------------------------------------------GCA..................................................................................................................................................................................................................................2011.001000000000000000000010000000000000000000000000000000000000000000
..........................................................................TCTGAGCT----GCC------------------------------------------------------------------------------------------------------------------------------GCAGCCGC.............................................................................................................................................................................................................................1911.001100000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................CAGCCGCAGCCACAGCT------------ACAGCT.................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................ACA---TCATCA---GCAA---CAATATCCA..................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................CAGAA---------------CAACAAT---AGCAACA...............................................1920.501000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................T------------ACAGCTA------------------------CAGCTACAGCCA............................................................................................................................................................2040.251001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................ACAGCTA------------------------CAGCTACAGCCACA..........................................................................................................................................................2150.201001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................AA---------------CAACAAT---AGCAACAACAAT..........................................21120.081001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................A---------------CAACAAT---AGCAACAACA............................................18200.051001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................CAGCT------------ACAGCTA------------------------CAGCTACA................................................................................................................................................................20200.051000000000000000000000000000000000000000100000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................AA---------------CAACAAT---AGCAACAACA............................................19200.051001000000000000000000000000000000000000000000000000000000000000
droGri2
AGCAACAA-----------CC-GCA------------------------------------GCAACAGCAACAACCACAGCA----GCAGCAA----------------------------CA--------------------------AC------------------------C----------ACAGCAGCA--GCAACAA---CAACATCAACAG------------CA------------GCAGCA------------------------ACAACAACATCCACAGCAGCAGC--------CA---------------CAACAACATCC---ACAGCA---GCAG---CCACAACAACAT---------------CCACAGC---AGCAGCAGCAACAACCCACAC--------------------------AACCATTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
............................................................................ACAGCA----GCAGCAA----------------------------CA--------------------------AC------------------------C----------ACA...............................................................................................................................................................................................................................................................21130.08110
..............................................................................................................................................................................................................................................................................................................................................................................................ACAGC---AGCAGCAGCAACAACC......................................21130.08110
............................................................................ACAGCA----GCAGCAA----------------------------CA--------------------------AC------------------------C----------A.................................................................................................................................................................................................................................................................19170.06110
................................................................................................................................................................................................................AACATCAACAG------------CA------------GCAGCA------------------------AC.......................................................................................................................................................................21190.05101
......................................................................................................................................................................................................CAACAA---CAACATCAACAG------------CA------------.......................................................................................................................................................................................................20200.05110
droWil2
AGCAACAG-----------CA-GCA------------------------------------ACAATGGCAGCAACTGCAGCA----GCAACAA----------------------------CA-----ACAACAGCAGCAACAACAACAG---------------------------------------------------------------CAGCAG------------CA------------ACAAC------------------------AGCAACAGCAACAACAACTGCAGC--------AGCAACAACAACAGCAGCAGCAACAACA---GCATCA---GCAA---CAGCAACAGCAG---------------CAACAAT---GGCAGCA---GCA---ACAACAGCAACATCAACTGC--AGCAGCAACAGCAACASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................................................................................................................................................................................................................................................................................................AGC--------AGCAACAACAACAGCA..........................................................................................................................19200.20400040
.........................................................................................................................................................................................................................................................................................................................ACAACAGCAGCAGCAACA.................................................................................................................18200.20400040
....................................................................................................................................................................................................................................................................................................................................................TCA---GCAA---CAGCAACAGCAG---------------CAACAAT---......................................................2660.17101000
............................................................................................................................................................................................................................................................................................................................ACAGCAGCAGCAACAACA---GC.........................................................................................................20200.15300030
..........................................................................................................................................CAACAACAACAG---------------------------------------------------------------CAGCAG------------CA------------ACA....................................................................................................................................................................................................23200.10200011
..........................................................................................................................................CAACAACAACAG---------------------------------------------------------------CAGCAG------------CA------------.......................................................................................................................................................................................................20200.10200020
............................................................................................................................................................................................................................................................................................................................................................AA---CAGCAACAGCAG---------------CAACAAT---GG....................................................23200.10202000
..........................................................................................................................................CAACAACAACAG---------------------------------------------------------------CAGCAG------------CA------------AC.....................................................................................................................................................................................................22200.10200020
............................................................................................................................................................................................................................................................................................................................................................AA---CAGCAACAGCAG---------------CAACAAT---GGC...................................................24200.10202000
....................................................................................................................................................................................................................................................................................................................................................TCA---GCAA---CAGCAACAGCAG---------------CAACA...........................................................24100.10100010
.......................................................................................CAACAA----------------------------CA-----ACAACAGCAGC.................................................................................................................................................................................................................................................................................................................19200.10202000
.................................................................................................................................CAACAGCAGCAACAACAACA.......................................................................................................................................................................................................................................................................................................20200.10200020
.........................................................................................................................................................................................................................................................................................................................................CAACA---GCATCA---GCAA---CAGCAACAGCAG---------------................................................................27120.08100010
......................................................................................................................................................................................................................................................................................................................................CAACAACA---GCATCA---GCAA---CAGCAACAG..................................................................................27120.08101000
..........................................................................................................................................................................................................................................................................................................................CAACAGCAGCAGCAACAACA---GCATCA---G.................................................................................................27120.08100010
......................................................................................................................................................................................................................................................................................................................................CAACAACA---GCATCA---GCAA---CAGC.......................................................................................22140.07100010
..............................................................................................................................................................................................................................................................................................AACAACTGCAGC--------AGCAACAACAACA.............................................................................................................................25150.07101000
.........................................................................................................................................................................................................................................................................................................................................CAACA---GCATCA---GCAA---CAGC.......................................................................................19170.06100010
.............................................................................................................................................................................................................................................................................................................................................A---GCATCA---GCAA---CAGCAACAGCAG---------------................................................................23170.06101000
...................................................................................................................................................................................................................................................................................................................................................ATCA---GCAA---CAGCAACAGCAG---------------CAAC............................................................24190.05101000
......................................................................................GCAACAA----------------------------CA-----ACAACAGCAGCA................................................................................................................................................................................................................................................................................................................21200.05100010
....................................................................................................................................................AG---------------------------------------------------------------CAGCAG------------CA------------ACAAC------------------------AGC.......................................................................................................................................................................18200.05100010
.................................................................................A----GCAACAA----------------------------CA-----ACAACAGCAGC.................................................................................................................................................................................................................................................................................................................21200.05101000
..................................................................................................................................................................................................................................................................................................................................................CATCA---GCAA---CAGCAACAGCA................................................................................20200.05100010
....................................................................................................................................................AG---------------------------------------------------------------CAGCAG------------CA------------ACAAC------------------------AGCAACAGCA................................................................................................................................................................25200.05100001
.............................................................................................................................................CAACAACAG---------------------------------------------------------------CAGCAG------------CA------------ACAAC------------------------AG........................................................................................................................................................................24200.05101000
.........................................................................................................................................GCAACAACAACAG---------------------------------------------------------------CAGCAG------------CA------------ACA....................................................................................................................................................................................................24200.05100010
........................................................................................................................................................................................................................................................................................AGCAACAACAACTGCAGC--------AGCAACA...................................................................................................................................25200.05100010
.................................................................................................................................................AACAG---------------------------------------------------------------CAGCAG------------CA------------ACAAC------------------------AGCA......................................................................................................................................................................22200.05101000
.....................................................................................................................................................................................................................................................................................................GCAGC--------AGCAACAACAACAGCAGCAG......................................................................................................................25200.05100010
..........................................................................................................................A-----ACAACAGCAGCAACAACA..........................................................................................................................................................................................................................................................................................................19200.05100010
..................................................................................................................................................................................................................................................................................................................AGCAACAACAACAGCAGCAGCAACA.................................................................................................................25200.05100010
......................................................................................................................................................................................................................................................................................ACAGCAACAACAACTGCAGC--------A.........................................................................................................................................21200.05101000
........................................................................................................................................AGCAACAACAACAG---------------------------------------------------------------CAGCAG------------CA------------ACA....................................................................................................................................................................................................25200.05100010
.................................................................................................................................CAACAGCAGCAACAACAACAG---------------------------------------------------------------C......................................................................................................................................................................................................................................22200.05101000
................................................................................CA----GCAACAA----------------------------CA-----ACAACAGCAGCAAC..............................................................................................................................................................................................................................................................................................................25200.05100010
.....................................................................................................................................................................................................................................................................................AACAGCAACAACAACTGCAGC--------AGC.......................................................................................................................................24200.05101000
.....................................................................................................................................................................................................................................................................................AACAGCAACAACAACTGCAGC--------AGCAAC....................................................................................................................................27200.05101000
..................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAG---------------CAACAAT---GG....................................................20200.05101000
........................................................................................................................................................................................................................................................................................AGCAACAACAACTGCAGC--------AGCAA.....................................................................................................................................23200.05101000
....................................................................................................................................................AG---------------------------------------------------------------CAGCAG------------CA------------ACAAC------------------------AGCAACA...................................................................................................................................................................22200.05100010
..............................................................................AGCA----GCAACAA----------------------------CA-----ACAACAGCAG..................................................................................................................................................................................................................................................................................................................23200.05100010
.........................................................................................................................CA-----ACAACAGCAGCAACAACAACA.......................................................................................................................................................................................................................................................................................................23200.05100001
................................................................................CA----GCAACAA----------------------------CA-----ACAACAGCA...................................................................................................................................................................................................................................................................................................................20200.05100010
......................................................................................GCAACAA----------------------------CA-----ACAACAGCA...................................................................................................................................................................................................................................................................................................................18200.05101000
...............................................................................................................................................ACAACAG---------------------------------------------------------------CAGCAG------------CA------------ACAAC------------------------A.........................................................................................................................................................................21200.05101000
.....................................................................................................................................................G---------------------------------------------------------------CAGCAG------------CA------------ACAAC------------------------AGCAACAGCA................................................................................................................................................................24200.05100010
..................................................................................................................................AACAGCAGCAACAACAACAG---------------------------------------------------------------CA.....................................................................................................................................................................................................................................22200.05100001
...........................................................................................AA----------------------------CA-----ACAACAGCAGCAACAACAACAG---------------------------------------------------------------.......................................................................................................................................................................................................................................26200.05100010
...........................................................................................................................................................................................................................................................................................................................AACAGCAGCAGCAACAACA---GCA........................................................................................................22200.05101000
....................................................................................................................................................................................................................................................................................CAACAGCAACAACAACTGCAG...................................................................................................................................................21200.05101000
AGCAACAG-----------CA-GCA------------------------------------ACAATGG........................................................................................................................................................................................................................................................................................................................................................................................20200.05101000
..............................................................................AGCA----GCAACAA----------------------------CA-----ACAACAGCA...................................................................................................................................................................................................................................................................................................................22200.05100010
...........................................................................................................................................................................................................................................................................................................................................................CAA---CAGCAACAGCAG---------------CAACAAT---GGC...................................................25200.05101000
.........................................................................................................................................................................................................................................................................................................................ACAACAGCAGCAGCAACAA................................................................................................................19200.05100010
...................................................................................................................................................................................................................................................................................................................................................ATCA---GCAA---CAGCAACAGCAG---------------C...............................................................21200.05101000
...........................................................................................................................................................................................................................................................................................AACAACAACTGCAGC--------AGCAACA...................................................................................................................................22200.05101000
......................................................................................................................................GCAGCAACAACAACAG---------------------------------------------------------------CAGCAG------------CA------------.......................................................................................................................................................................................................24200.05100010
...........................................................................................................................................AACAACAACAG---------------------------------------------------------------CAGCAG------------CA------------A......................................................................................................................................................................................................20200.05100100
.................................................................................A----GCAACAA----------------------------CA-----ACAACAGCAGCAAC..............................................................................................................................................................................................................................................................................................................24200.05100010
..............................................................................................................................................AACAACAG---------------------------------------------------------------CAGCAG------------CA------------ACAAC------------------------AGCA......................................................................................................................................................................25200.05100010
...............................................................................GCA----GCAACAA----------------------------CA-----ACAACAGCAGCA................................................................................................................................................................................................................................................................................................................24200.05100010
........................................................................................................................................................................................................................................................................................................................AACAACAGCAGCAGCAACAACA---GCA........................................................................................................25200.05100010
dp5
AGCGGCAG-----------TC-GCC------------------------------------AGAACAACTGGAAGGCCTAAG----GCCAGAA----------------------------AA--------------------------AC------------------------C----------CCAGCAACG--CCAACAA---CAACAGCAACAG------------CA------------GCAGCA------------------------ACAACAACAACAACAGGAACAAC--------AA---------------CA---------------------ACAG---CAACAACAACAA---------------CAACAAC---AGCAAAAACAACAACAGCAAC--------------------------AACAACTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................................................................................................................................................................................................................................................................................................CAAC---AGCAAAAACAACAACAGC....................................2211.0010010000000
..................................................................................................................................................................................................................................................................................................................AA---------------CA---------------------ACAG---CAACAACAACAA---------------C...............................................................21200.851701070000000
..................................................................................................................................................................................................................................................................................................GGAACAAC--------AA---------------CA---------------------ACAG---CAAC.......................................................................................2040.2510100000000
..................................................................................................................................................................................................................................................................................................................AA---------------CA---------------------ACAG---CAACAACAACAA---------------CAAC............................................................24200.1530300000000
..................................................................................................................................................................................................................................................................................................................AA---------------CA---------------------ACAG---CAACAACAACAA---------------................................................................20200.1020002000000
..................................................................................................................................................................................................................................................................................................................AA---------------CA---------------------ACAG---CAACAACAACAA---------------CA..............................................................22200.1020000200000
.........................................................................................................................................................................................................CAA---CAACAGCAACAG------------CA------------GCAG...................................................................................................................................................................................................21200.1020000000020
..................................................................................................................................................................................................................................................................................................................AA---------------CA---------------------ACAG---CAACAACAACAA---------------CAA.............................................................23200.1020200000000
......................................................................................................................................................................................................CAACAA---CAACAGCAACAG------------CA------------GCAGCA------------------------.........................................................................................................................................................................26110.0910000100000
....................................................................................................................................................................................................................GCAACAG------------CA------------GCAGCA------------------------ACAACAACAA...............................................................................................................................................................25110.0910001000000
...............................................................................................................................................................................................................CAACAGCAACAG------------CA------------GCAGCA------------------------ACAAC....................................................................................................................................................................25110.0910000100000
......................................................................................................................................................................................................CAACAA---CAACAGCAACAG------------CA------------GCAG...................................................................................................................................................................................................24150.0710100000000
....................................................................................................................................................................................................................................................................................................AACAAC--------AA---------------CA---------------------ACAG---CAACAACAACAA---------------................................................................26200.0510010000000
...........................................................................................................................................................................................................A---CAACAGCAACAG------------CA------------GCAGCA------------------------.........................................................................................................................................................................21200.0510000010000
..................................................................................................................................................................................................................................................................................................................AA---------------CA---------------------ACAG---CAACAACAACA................................................................................19200.0510100000000
........................................................................................................................................................................................................................CAG------------CA------------GCAGCA------------------------ACAACAACA................................................................................................................................................................20200.0510010000000
......................................................................................................................................................................................................................AACAG------------CA------------GCAGCA------------------------ACAACAAC.................................................................................................................................................................21200.0510010000000
.......................................................................................................................................................................................................................ACAG------------CA------------GCAGCA------------------------ACAACAACA................................................................................................................................................................21200.0510000001000
.........................................................................................................................................................................................................................AG------------CA------------GCAGCA------------------------ACAACAACAACA.............................................................................................................................................................22200.0510100000000
.........................................................................................................................................................................................................CAA---CAACAGCAACAG------------CA------------GCAGC..................................................................................................................................................................................................22200.0510100000000
.................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAA---------------CAACAAC---......................................................19200.0510001000000
...............................................................................................................................................................................................................CAACAGCAACAG------------CA------------GCAGC..................................................................................................................................................................................................19200.0510100000000
.................................................................................................................................................................................................................ACAGCAACAG------------CA------------GCAGCA------------------------.........................................................................................................................................................................18200.0510000010000
...................................................................................................................................................................................................................................................................................................................A---------------CA---------------------ACAG---CAACAACAACAA---------------CA..............................................................21200.0510001000000
.........................................................................................................................................................................................................................................................................................................C--------AA---------------CA---------------------ACAG---CAACAACAACA................................................................................20200.0510000001000
........................................................................................................................................................................................................ACAA---CAACAGCAACAG------------CA------------G......................................................................................................................................................................................................19200.0510100000000
.........................................................................................................................................................................................................................................................................................................C--------AA---------------CA---------------------ACAG---CAACAACAACAA---------------C...............................................................22200.0510010000000
.......................................................................................................................................................................................................................ACAG------------CA------------GCAGCA------------------------ACAACAAC.................................................................................................................................................................20200.0510001000000
..............................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGCAAC--------------------------AACAAC.19200.0510000100000
...........................................................................................................................................................................................................................................................................................................................................................CAG---CAACAACAACAA---------------CAACA...........................................................20200.0510100000000
........................................................................................................................................................................................................................................................................................................AC--------AA---------------CA---------------------ACAG---CAACAACAACAA---------------................................................................22200.0510100000000
.......................................................................................................................................................................................................................................................................................................AAC--------AA---------------CA---------------------ACAG---CAACAACA...................................................................................19200.0510001000000
........................................................................................................................................................................................................ACAA---CAACAGCAACAG------------CA------------GCA....................................................................................................................................................................................................21200.0510100000000
...................................................................................................................................................................................................................................................................................................................................CA---------------------ACAG---CAACAACAACAA---------------CA..............................................................20200.0510000100000
...................................................................................................................................................................................................................................................................................................................................CA---------------------ACAG---CAACAACAACAA---------------CAA.............................................................21200.0510010000000
..................................................................................................................................................................................................................CAGCAACAG------------CA------------GCAGCA------------------------ACA......................................................................................................................................................................20200.0510100000000
...........................................................................................................................................................................................................A---CAACAGCAACAG------------CA------------GCAGC..................................................................................................................................................................................................20200.0510010000000
droPer2
GGCGGCAG-----------CT-CCC---A--GCAAT--------------------------CTGCAAGTGCGGCA-CAGCT----CCAA---------------------------------------------------------------------------------------------------------AAGCAGCAG---CAACAGCAGCAG------------CA------------GCAACAA------------------------CAGCAGCAACAGCAGCAGCAGC--------AA---------------CAACAACAGCA---GCAGCAACAGCAGCAGCAACAGCAGCAG---------------CAACAACAGCAGCAGCA---GCA---ACAGC---AG--TCGATGGCAG---------GGCCACASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................................................................................................................................................................................................................................................................................................................AGC---AG--TCGATGGCAG---------GGC....1813.003210000
..........................................................................................................................................................................................................................................................................................................................................................................................................GCA---GCA---ACAGC---AG--TCGATGGCAG---------GGG....2612.002200000
............................................................................................................................................................................................................................................................................................................................................................................................................A---GCA---ACAGC---AG--TCGATGGC..................1912.002200000
..............................................................CTGCAAGTGCGGCA-CAGCT----......................................................................................................................................................................................................................................................................................................................................................................1911.001000010
..........................................................................................................................................................................................................................................................................................................................................................................................................GCA---GCA---ACAGC---AG--TCGATGGCAG---------GGC....2611.001100000
........................................................................................................................................................................................................GCAG---CAACAGCAGCAG------------CA------------GCA....................................................................................................................................................................................................21200.102002000
..........................................................................................................................................................................................................AG---CAACAGCAGCAG------------CA------------GCAACA.................................................................................................................................................................................................22200.102002000
........................................................................................................................................................................................................................................................................................AGCAACAGCAGCAGCAGC--------AA---------------CA.......................................................................................................................22200.102002000
.......................................................................................................................................................................................................................................................................................................................................AACAGCA---GCAGCAACAGCAGC.............................................................................................21200.051001000
................................................................................................................................................................................................................................................................................................CAGCAGCAGC--------AA---------------CAACAACAGCA---GCA........................................................................................................26200.051001000
............................................................................................................................................................................................................................................................................................................................................................................G---------------CAACAACAGCAGCAGCA---GCA---ACA...................................24200.051001000
...................................................................................................................................................................................................................................................................................................CAGCAGC--------AA---------------CAACAACAGCA---GC.........................................................................................................22200.051100000
..........................................................................................................................................................................................................................................................................................................................................................................CAG---------------CAACAACAGCAGCAGCA---GCA---......................................23200.051001000
...........................................................................................................................................................................................................................................................................................................................................................................AG---------------CAACAACAGCAGCAGCA---GC..........................................21200.051010000
.......................................................................................................................................................................................................AGCAG---CAACAGCAGCAG------------CA------------GCA....................................................................................................................................................................................................22200.051000010
....................................................................................................................................................................................................................................................................................................AGCAGC--------AA---------------CAACAACAGCA---G..........................................................................................................20200.051010000
droAna3
AGCAACAG-----------CA-AC------------------------------------AGCAGCAGCAACAGCAATCGCA----GCTAGTA----------------------------GGGCA------------------------------------------------------------GCAGCAGCA--GCAGCAG---C------------------------A------------ACAACAA------------------------CAGTCACAACAACAGCAGCAAC--------AA---------------TCGCAGCAGCA---ACAGCA---ACAG---CAACAACAGCAG---------------CAGCAGC---------AGCAACAACTATCG-AGCGAT----TCTGT--TGCAGCAGCAGCAGCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................................GCTAGTA----------------------------GGGCA------------------------------------------------------------GCAGCAGCA--GC.....................................................................................................................................................................................................................................................2311.001000010
..........................................................................................GTA----------------------------GGGCA------------------------------------------------------------GCAGCAGCA--GCAGCAG---C------------------------....................................................................................................................................................................................................................2511.001010000
...................CA-AC------------------------------------AGCAGCAGCAACAGCAAT..............................................................................................................................................................................................................................................................................................................................................................................2250.201000001
....................................................................................................................................................................................................................................................................................................................................................................CAACAGCAG---------------CAGCAGC---------AGC.............................................19200.153030000
..................................................................................................................................................................................................................................................................................................................................................................AACAACAGCAG---------------CAGCAGC---------................................................18200.153030000
.............................................................................................................................................................................................................................................................................................................................................................G---CAACAACAGCAG---------------CAGCAGC---------................................................20200.153021000
.............................................................................................................................A------------------------------------------------------------GCAGCAGCA--GCAGCAG---C------------------------A------------.......................................................................................................................................................................................................19200.102200000
.............................................................................................................................................................................................................................................................................................................................................................G---CAACAACAGCAG---------------CAGCAGC---------AGC.............................................23200.102020000
.............................................................................................................................A------------------------------------------------------------GCAGCAGCA--GCAGCAG---C------------------------A------------AC.....................................................................................................................................................................................................21200.102020000
.........................................................................................................................GGGCA------------------------------------------------------------GCAGCAGCA--GCAGCAG---C------------------------A------------.......................................................................................................................................................................................................23110.091100000
.GCAACAG-----------CA-AC------------------------------------AGCAGCAGCAACAGC.................................................................................................................................................................................................................................................................................................................................................................................26140.071010000
.........................................................................................................................GGGCA------------------------------------------------------------GCAGCAGCA--GCAGCAG---.............................................................................................................................................................................................................................................21150.071100000
.............................................................................................................................................................................................................................................................................................................................................A---ACAGCA---ACAG---CAACAACAGC.................................................................................21170.061010000
............................................................................................................................................................................................................................................................................................................................................................AG---CAACAACAGCAG---------------CAGCAGC---------AGCA............................................25200.051001000
..........................................................................................................................................................................................................................................................................................................................................................ACAG---CAACAACAGCAG---------------CAGC............................................................20200.051010000
............................................................................................................................................................................................................................................................................................................................................................AG---CAACAACAGCAG---------------CAGCAGC---------AGC.............................................24200.051001000
...................................................................................................................................................................................................................................................................................................................................................AGCA---ACAG---CAACAACAGCAG---------------CAGC............................................................24200.051010000
..........................................................................................................................................................................................................................................................................................................................................................ACAG---CAACAACAGCAG---------------CAGCAGC---------A...............................................24200.051000001
...........................................................................................................................................................................................................................................................................................................................................................CAG---CAACAACAGCAG---------------CAGCAGC---------AGCA............................................26200.051010000
AGCAACAG-----------CA-AC------------------------------------AGCAGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................21200.051000001
............................................................................................................................................................................................AGCAGCA--GCAGCAG---C------------------------A------------ACAA...................................................................................................................................................................................................20200.051000001
..........................................................................................................................................................................................GCAGCAGCA--GCAGCAG---C------------------------A------------ACA....................................................................................................................................................................................................21200.051100000
............................................................................................................................................................................................................................................................................................................................................................AG---CAACAACAGCAG---------------CAGCA...........................................................19200.051010000
...................................................................................................................................................................................................................................................................................................................................................................ACAACAGCAG---------------CAGCAGC---------AG..............................................19200.051001000
......AG-----------CA-AC------------------------------------AGCAGCAGCAACAG..................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
............................................................................................................................CA------------------------------------------------------------GCAGCAGCA--GCAGCAG---C------------------------A------------ACA....................................................................................................................................................................................................23200.051000001
................................................................................................................................................................................................GCA--GCAGCAG---C------------------------A------------ACAACAA------------------------CA......................................................................................................................................................................21200.051100000
....ACAG-----------CA-AC------------------------------------AGCAGCAGCAAC....................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
....................................................................................................................................................................................................................................................................................................................................................................CAACAGCAG---------------CAGCAGC---------AGCAACA.........................................23200.051010000
............................................................................................................................................................................................................................................................................................................................................CA---ACAGCA---ACAG---CAACAA.....................................................................................18200.051001000
...AACAG-----------CA-AC------------------------------------AGCAGCAGCAACAGC.................................................................................................................................................................................................................................................................................................................................................................................24200.051010000
......AG-----------CA-AC------------------------------------AGCAGCAGCAACAGC.................................................................................................................................................................................................................................................................................................................................................................................21200.051010000
...................................................................................................................................................................................................................................................................................................................................................................ACAACAGCAG---------------CAGCAGC---------AGCAACA.........................................24200.051000001
...........................................................................................................................GCA------------------------------------------------------------GCAGCAGCA--GCAGCAG---C------------------------....................................................................................................................................................................................................................20200.051100000
...........................................................................................................................................................................................................................................................................................................................................GCA---ACAGCA---ACAG---CAACAACA...................................................................................21200.051010000
.........................................................................................................................................................................................................................................................................................................................................CAGCA---ACAGCA---ACAG---CAACAAC....................................................................................22200.051010000
.......G-----------CA-AC------------------------------------AGCAGCAGCAACAGC.................................................................................................................................................................................................................................................................................................................................................................................20200.051000001
...................CA-AC------------------------------------AGCAGCAGCAACAGCA................................................................................................................................................................................................................................................................................................................................................................................20200.051001000
...............................................................................................................................................................................................AGCA--GCAGCAG---C------------------------A------------ACAACAA------------------------CAG.....................................................................................................................................................................23200.051100000
droBip1
AGCAACAG-----------CA-AC------------------------------------AGCAGCAGGCACAGCAACAGCA----GCAGGCA----------------------------CAGCA--AC---------------AGCA---G------------------CAGGCA------------------CAGCAGCCG---C------AACAG------------CA------------CCACC------------------------CACAACAACAACAACAACAACAGC--------AGCAATCACAACAACATAAGCAACAACAGCAGCAACT---TCTC------CAACAAAAG---------------CAACAGC---AGCAGCA---GCA---ACAGCAA---------CATCAG--------GCCCTGCASizeHit CountTotal NormTotal
No Reads
droKik1
AGCAATAG-----------CA-AC------------------------------------AGCAACAGCTACAGCAACAGCA----ACACTG---------------------------------------------------------A------C------------------ACCAA---------------CAGCAACAC---CAACAACAGCAG------------CA---------CCAACACCAA------------------------CAGCAACAGCAACAGCAACAAC--------AA---------------CAACACCAACA---ATAATA---ACAA---CAAGAACAACAC---------------CAACAGC---AACACCAACACTAACAACAAC--------------------------ACCAACASizeHit CountTotal NormTotal
No Reads
droFic1
AGCAGCAG-----------CA-GC------------------------------------AACGGCAGCAACTGCAGCAGCA----GCAACT---------------------------------------------------------G------------------------------------------------CAGCAG---CAACAACAGCAG------------CAGCAACAACAGCAGCAACA------------------------ACAGCAGCAGCAACAGCAACAGC--------AG---------------CAACTACAACA---ACAACA---GCAG---CAACAGCAGCAG---------------CAACAAC---AGCAACAGCAGCAACTACAAC--------------------------AACAACASizeHit CountTotal NormTotal
No Reads
droEle1
GGCGACAG-----------CG-GC------------------------------------GGCTGCTGCGGCTGCTGTTGAGAGTCGCTTGTTGGGTTTGCAGCA------CCAG--------------------------------------------------------------------------------CAACAGCAACAACAGCAACATCAGCAGCAACAACAGCA------------ACATCA------------------------GCAGCAA------CAACAGC-----------------------------A---GCAGCA---ACAACA---GCAA---CAACAACAGCAA---------------CACCAAC---AGCAACATCAGCAGCAGCAGC--------------------------ACCTACASizeHit CountTotal NormTotal
No Reads
droRho1
ATTAACAAGTCAAACGCAATCCC-------------------------------------------CCCTGCAATCCCAGCA----CCAAACGCAGCC----GCAGCAACAACATC-----------------AGCAACAACAACAGCAG---------------------------------------------------------------CAGCAG------------CA------------ACAAC------------------------AACAACAGCAACAACAACAAC--------------------------------------A---GCAGCA---ACAA---CAACAGCAGCAA---------------CAACAAC---AGCAGCAGCAACAACAACAAC--------------------------AGCAGCASizeHit CountTotal NormTotal
No Reads
droBia1
A----CAG-----------CC-CCAGCAA------T---------CATCTC---------AACAGCAGATCCAGCA--------------------------------------------GCCTCAGC-----------------------ATCAAC------------------CCCAGCATCAA---------CCGCAACAG---CAACCGCAACAG------------CA------------ACAACAA------------------------CAACAGCAACAACAGCAACAAC--------AA---------------CAACAACAGCA---ACAGCA---ACAG---CAACAGCAGCAA---------------CAACAGC---AGCAACAGCAGCAACAACAGC--------------------------AACAGCASizeHit CountTotal NormTotal
No Reads
droTak1
GGCAACTT-----------TCTGCT------------------------------------GCAGCAGCAA-----------------------------------------CGCCAGCAGCA-----------------ACAACAGCAGCTTCTACAACAATTTACGCTGCAGG--------------------CGGCAGCCG---CA-------CA---------------------------GCAGCAA------------------------CAACAACAACAACAGCAGCAGC--------AG---------------CAACACCAGCA---GCAGCA---GCAG---CAACAACAACAG---------------CA--------------A---GCA---ACAAG---TA--GCAATGCCTT------AACCAAGACASizeHit CountTotal NormTotal
No Reads
droEug1
AGCAACAG-----------CA-AC------------------------------------ACTAACACTAGCAACTTTAGCA----GCCAGCAAGGCTAGCAAAA------CCACA-----------------------------AG------------------------------------------------CAGCAGCAG---CAGCAGCAGCAG------------CA------------GCAACA------------------------TCAACAGCGGCAACAGAAACAGC--------AA---------------CAACAACAACA---ACCACA---ACAA---CAGCAGCGGCAG---------------CAACACT---AGCA---AAAGCAGCAATAAC--------------------------AGAAACASizeHit CountTotal NormTotal
No Reads
dm3
AGCAACAG-----------CA-GCA---------ACCACCGCCCCCCTCGC---------AGCAGCAGCAACAGCT--------------------------------------------GCATCAGC-----------------------TCAAGT------------------CC------------------CCGCAACAG---CACCAGCAACAG------------CT------------GCAGCAG------------------------CACCAGCAGCAGCAGCAGCAGC--------AA---------------CACCACCAGCA---GCAACA---TCAC------CAGCAGCAA---------------CACCAGC---AGCAACAGCAGCAACACCATC--------------------------AGCAGCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
......................GCA---------ACCACCGCCCCCCTCGC---------AGCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................CC------------------CCGCAACAG---CACCAGCAC....................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................G---CACCAGCAACAG------------CT------------GCA....................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................CCGCCCCCCTCGC---------AGCAGCAG........................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................CCAGCAACAG------------CT------------GCAGCAG------------------------C.......................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................AGCAGCAGC--------AA---------------CACCACCAGC...............................................................................................................2190.6760000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAACACCATC--------------------------AGCAGCA2340.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................GCAGCAGCAGC--------AA---------------CACCACCAGCA---GCA........................................................................................................2740.5020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................AGCA---GCAACA---TCAC------CAGCAGC.................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................GCAGCAGC--------AA---------------CACCACCAGC...............................................................................................................20110.4550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................GCAGCAGC--------AA---------------CACCACCAGCA---GC.........................................................................................................2350.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................GCAGC--------AA---------------CACCACCAGCA---GCA........................................................................................................2160.3320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................CAA---------------CACCAGC---AGCAACAGCAG...........................................2170.2920000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................CAGCA---GCAACA---TCAC------CAGCAGA.................................................................................2250.2010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................GCAGCAGCAGC--------AA---------------CACCACCAGC...............................................................................................................2350.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................AACAG---CACCAGCAACAG------------C....................................................................................................................................................................................................................1860.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................GCAGC--------AA---------------CACCACCAGCA---GC.........................................................................................................2060.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................CAGC--------AA---------------CACCACCAGCA---GCA........................................................................................................2060.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................AGC--------AA---------------CACCACCAGCA---GC.........................................................................................................1860.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................GC---AGCAACAGCAGCAACA......................................18200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................AGCAGCAGCAGC--------AA---------------CACCA....................................................................................................................19200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................GCAGC--------AA---------------CACCACCAGCA---G..........................................................................................................1970.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................AG------------------------CACCAGCAGCAGCAGCAGCAGC--------A.........................................................................................................................................2570.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.........................................................................................................................................................................................................................................................................................GCAGCAGCAGCAGCAGC--------AA---------------CACCA....................................................................................................................24140.1420000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................CAGCAGCAGCAGCAGC--------AA---------------CACCA....................................................................................................................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................ACCAGC---AGCAACAGCAGCA.........................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
...........................................................................................................................................................................................................................................................G------------------------CACCAGCAGCAGCAGCAGCAGC--------..........................................................................................................................................23110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................AGCAGC--------AA---------------CACCACCAGCA---...........................................................................................................19120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................GCAGCAGC--------AA---------------CACCACCAG................................................................................................................19130.0810000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................CCTCGC---------AGCAGCAGCAACATG.................................................................................................................................................................................................................................................................................................................................................................................21140.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................CAA---------------CACCAGC---AGCAACAG..............................................18150.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................CAGCAGCAGC--------AA---------------CACCACCA.................................................................................................................20170.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................................G------------------------CACCAGCAGCAGCAGCAGCA....................................................................................................................................................21190.0510000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAGC--------AA---------------CACC.....................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAGCAGC--------AA---------------CA.......................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................CCAGCAGCAGCAGCAGCAGC--------A.........................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.........................................................................................................................................................................................................................................................................................GCAGCAGCAGCAGCAGC--------AA---------------CA.......................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAGC--------AA---------------CA.......................................................................................................................19200.0510000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................AGCAG------------------------CACCAGCAGCAGCAGC........................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................CCAGCAGCAGCAGCAGCAGC--------AA---------------CA.......................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................GCAGCAG------------------------CACCAGCAGCAGCA..........................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
droSim2
TGCACTAC---------GATCCTCACCAGGA---------------GCTGC---------AGTTCGAGCAGCATCAGCCGCA----CCAG---------------------------------------------------------------------------------------------------------TCGCATCAG---CAGCATCAGCAG------------CA------------GCAACA------------------------TCAGCAGCAACAACATCAGCAGC--------AA---------------CATCAGCAGCA---GCAGCA---GCTG---CAACAGCAACAT---------------CAGCAAC---ATCAGCAGCTGCAGCATCAGC--------------------------AGCAGCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................GCTGC---------AGTTCGAGCA......................................................................................................................................................................................................................................................................................................................................................................................1530.33100000000001000000
..............................................GCTGC---------AGTTCGAGCAGT....................................................................................................................................................................................................................................................................................................................................................................................1750.20100000000001000000
...........................................................................................................................................................................................................................................................................................AACAACATCAGCAGC--------AA---------------CA.......................................................................................................................1960.17100000010000000000
.......................................................................................................................................................................................................................................................................................CAGCAACAACATCAGCA....................................................................................................................................................17200.05100000010000000000
........................................................................................................................................................................................................................................................................................................GC--------AA---------------CATCAGCAGCA---GCA........................................................................................................18200.05100000000001000000
..........................................................................................................................................................................................................AG---CAGCATCAGCAG------------CA------------GC.....................................................................................................................................................................................................18200.05100000000001000000
droSec2
AGCATCAG-----------CC-GCACCAG------T------------CGCATCAGCAACATCAGCAGCAGCAGCTGCAGCA----TCA----------------------GCAGC-----------------------------AGCAG---------------------------------------------CAGCTGCAG---CATC---AGCAG------------CAGCA---------GCAACATCAGCAG------------------CAACAAAATCAGCAGCAGCAGC--------AG---------------CTACAACAGCA---ACATCA---GCAG---CAGCAACAGCTG---------------CAGCATC---AGCAGCAGCATCAGCAGCAAC--------------------------ATCAGCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................................................................................................................................................................................................................................................................................................................CAGCATC---AGCAGCAGCATCAGCA......................................2340.2510010
............................................................................GCAGCA----TCA----------------------GCAGC-----------------------------AGCAG---------------------------------------------CAGC.....................................................................................................................................................................................................................................................23100.1010010
............................................................................................................................................................................................................................................................................................................................................CA---ACATCA---GCAG---CAGCAACAG..................................................................................21110.0910001
.........................................................................................................................................................................................................................................GCA---------GCAACATCAGCAG------------------CAAC....................................................................................................................................................................20130.0810010
...........................................................................................................................................................................................................................................................................................................................................GCA---ACATCA---GCAG---CAGCAACA...................................................................................21160.0610010
.................................................................................................................................................................................................................................................................................................................................................ACATCA---GCAG---CAGCAACA...................................................................................18200.0511000
..................................................................................................................................................................................................................................................................................................................................................CATCA---GCAG---CAGCAACAGC.................................................................................19200.0510010
..........................................................................................................................................................................................................................................................................................................................................AGCA---ACATCA---GCAG---CAGCAA.....................................................................................20200.0510001
droYak3
TGCAACAG-----------CA-TC------------------------------------AACTGCAACCGCAGCAAAAGTT----ACAAGT----------------------------GCAGCAGC-----------------------AGCAGC------------------CG------------------CGGAAGACA---C------TTCAG------------CAACT---------ACCCCAAACGCAACAACAACAGCAGCAACATCAACTGCAACAACAGCAAC--------------------------------------------AGCA---ACTG---CAACAACATCAG---------------CAACTTC---AACTGCAACAGCAAGTGCAGC--------------------------AAATGCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............................................................................................................................................................................................................................................................CAACAACAACAGCAGCAACATCA......................................................................................................................................................................2330.33100000010000
.......................................................................................................................................................................................................................................................................ACAGCAGCAACATCAACTGC.................................................................................................................................................................2030.33101000000000
droEre2
AGCAGCAT-----------CA-GC------------------------------------AGCAGCAGCAGCAGCATCAACA----GCAGCA---------------------------------------------------------G---------------------------------------------------------CAGCAGCAACAG------------CA------------GCAACAG---CAGCAACAGC---------AGCAGCAGCAACAACAGCAACAGC--------AG------------------------------CAGCA---GCAA---CAGCAGCAGCATCAACAGCAACAGCAGCAACAGC---AACAGCAGCAGCAGTTGCAGC--------------------------CACAACASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................AACAGC---AACAGCAGCAGCAGTT......................................2220.5010001000
..............................................................................................................................................................................................................................................................................................................................................................................................ACAGC---AACAGCAGCAGCAGTT......................................2120.5010000010
.....................................................................................................................................................................................................................................................................................................................................................................AGCAGCATCAACAGCAACA....................................................................1930.3310000100
......................................................................GCAGCATCAACA----GCAGCA---------------------------------------------------------G---------------------------------------------------------CAGCAGC......................................................................................................................................................................................................................................2640.2510100000
...........................................................................................................................................................................................................................................................G---CAGCAACAGC---------AGCAGCAGC.................................................................................................................................................................20200.1531000020
.......................................................................................................................................................................................................................................................AACAG---CAGCAACAGC---------AGCA......................................................................................................................................................................19200.1020002000
.......................................................................................................................................................................................................................................CA------------GCAACAG---CAGCAACAGC---------AGCA......................................................................................................................................................................23200.1021000100
.............................................................................................................................................................................................................................................................................................................................................................................................AACAGC---AACAGCAGCAGC..........................................18200.1020000020
......................................................................................................................................................................................................................................................................................GCAGCAACAACAGCAACAGC--------AG------------------------------CA........................................................................................................24120.0810000010
............................................................AGCAGCAGCAGCAGCATCAACA----......................................................................................................................................................................................................................................................................................................................................................................22120.0811000000
..........................................................................CATCAACA----GCAGCA---------------------------------------------------------G---------------------------------------------------------CAGCAGC......................................................................................................................................................................................................................................22160.0610001000
........................................................................................................................................................................................................................................................................................AGCAACAACAGCAACAGC--------AG------------------------------CA........................................................................................................22160.0610000010
................................................................................................................................................................................................................................................................................................................................................................................................AGC---AACAGCAGCAGCAGT.......................................18190.0511000000
.........................................................................................................................................................................................................................................................................................GCAACAACAGCAACAGC--------AG------------------------------C.........................................................................................................20200.0510100000
.................................................................................................................................................................................................................GCAGCAACAG------------CA------------GCAACAG---CAGCA........................................................................................................................................................................................24200.0510000100
........................................................................................................................................................................................................................................A------------GCAACAG---CAGCAACAGC---------AGCAGCAGC.................................................................................................................................................................27200.0511000000
........................................................................................................................................................................................................................................A------------GCAACAG---CAGCAACAGC---------A.........................................................................................................................................................................19200.0510000100
.................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAGCAACAGC---A.....................................................19200.0510000100
............................................................................................................................................................................................................................................................................................ACAACAGCAACAGC--------AG------------------------------CAGC......................................................................................................20200.0511000000
.....................................................................................................................................................................................................................................................................................................ACAGC--------AG------------------------------CAGCA---GCAA---CAGC.......................................................................................20200.0511000000
...................................................................................................................................................................................................................................................................................................CAACAGC--------AG------------------------------CAGCA---GCAA---CAGCA......................................................................................23200.0510000010
....................................................................................................................................................................................................................................................................................................AACAGC--------AG------------------------------CAGCA---GCAA---CAGCAGCA...................................................................................25200.0510001000
...........................................................................ATCAACA----GCAGCA---------------------------------------------------------G---------------------------------------------------------CAGCA........................................................................................................................................................................................................................................19200.0510000010
.........................................................................................GCA---------------------------------------------------------G---------------------------------------------------------CAGCAGCAACAG------------CA------------.......................................................................................................................................................................................................18200.0511000000
.........................................................................................................................................................................................................................AG------------CA------------GCAACAG---CAGCAACAGC---------AGCAG.....................................................................................................................................................................26200.0511000000
...................................................................................................................................................................................................................................................................................................................G------------------------------CAGCA---GCAA---CAGCAGCAGCA................................................................................21200.0510001000
..........................................................................................................................................................................................................................................................................................CAACAACAGCAACAGC--------AG------------------------------CAG.......................................................................................................21200.0510001000
................................................................................................................................................................................................................................................................AGCAACAGC---------AGCAGCAGCA................................................................................................................................................................19200.0510001000
..........................................................................CATCAACA----GCAGCA---------------------------------------------------------G---------------------------------------------------------CAGCA........................................................................................................................................................................................................................................20200.0510000010
.....................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAACAGC---AACAGC................................................20200.0510100000
...........................................................................................A---------------------------------------------------------G---------------------------------------------------------CAGCAGCAACAG------------CA------------GCA....................................................................................................................................................................................................19200.0510001000
...................................................................................................................................................................................................................................................................................................................G------------------------------CAGCA---GCAA---CAGCAGCAGC.................................................................................20200.0511000000
....................................................................................................................................................................................................................................................................................................AACAGC--------AG------------------------------CAGCA---GCAA---CAGCAGC....................................................................................24200.0510000010
..........................................................................................................................................................................................................................................................................................CAACAACAGCAACAGC--------AG------------------------------CA........................................................................................................20200.0510100000
.................................................................................A----GCAGCA---------------------------------------------------------G---------------------------------------------------------CAGCAGCAACAG------------CA------------GC.....................................................................................................................................................................................................24200.0510100000
.GCAGCAT-----------CA-GC------------------------------------AGCAGCAGCA......................................................................................................................................................................................................................................................................................................................................................................................21200.0510000100
...........................................................................................................................................................................................................................................................G---CAGCAACAGC---------AGCAGCAGCAA...............................................................................................................................................................22200.0511000000
.....CAT-----------CA-GC------------------------------------AGCAGCAGCAGCAGCA................................................................................................................................................................................................................................................................................................................................................................................23200.0510001000
....GCAT-----------CA-GC------------------------------------AGCAGCAGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................21200.0510000010
.................................................................................................................................................................................................................................................................GCAACAGC---------AGCAGCAGCAACA.............................................................................................................................................................21200.0510000010
................................................................................................................................................................................................................................................................................................CAGCAACAGC--------AG------------------------------CAGCA---GC................................................................................................19200.0510100000
..........................................................................................................................................................................................................................................................................................CAACAACAGCAACAGC--------AG------------------------------C.........................................................................................................19200.0511000000
........................................................................................................................................................................................................................................................ACAG---CAGCAACAGC---------AGCA......................................................................................................................................................................18200.0510000100
..................................................................................................................................................................................................................CAGCAACAG------------CA------------GCAACAG---CAGCA........................................................................................................................................................................................23200.0511000000
......................................................................................................................................................................................................................................................................................................CAGC--------AG------------------------------CAGCA---GCAA---CAGC.......................................................................................19200.0510000010
...............................................................................................................................................................................................................................................................CAGCAACAGC---------AGCAGCAGCAAC..............................................................................................................................................................22200.0510100000
.............................................................................................................................................................................................................................................................................................CAACAGCAACAGC--------AG------------------------------CAGCA---GCA...............................................................................................23200.0510001000

Generated: 05/18/2015 at 02:29 AM