ID:

dmo_235

 Coordinate:

scaffold_6414:9445-9505 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-18.9 -18.8 -18.8

Flybase annnotation

intergenic

No Repeatable elements found

mature
  1. dmo_235  scaffold_6414:9480-9504 +
  2. dmo_236  scaffold_6482:1880339-1880363 +
star
  1. dmo_235  scaffold_6414:9445-9473 +
  2. dmo_236  scaffold_6482:1880304-1880332 +

Sense Strand Reads

GGAAAAGCTTGTAGAAGTCCCCAAAAAAAAGCTGTTCGCTTTGCAACTTTTTAGTGGCTTCTGATATCGGCTCCAGCACAGACAATAGAACTTTGATGTCAGCCCATTGCTTCTTTGAAAGCTGAAGGTTTTCAGGCAAGTGTTGCCGGATGAACTCCTCG
***********************************..(((((.(((.....((((((...((((((((((......................)))))))))).)))))).....))))))))...************************************ 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V041
embryo
 V110
male body		 V049
head
 V056
head
.....................................................................................TAGAACTTTGATGTCAGCCCATTGC................................................... 25 0 2 133.50 267 175 78 14 0 0 0
.....................................................................................TAGAACTTTGATGTCAGCCCATTGCT.................................................. 26 0 2 87.00 174 156 18 0 0 0 0
...........TAGAAGTCCCCAAAAAAAAGCTGTT............................................................................................................................. 25 0 2 26.00 52 36 15 1 0 0 0
...........TAGAAGTCCCCAAAAAAAAGCTGTTCGC.......................................................................................................................... 28 0 2 25.00 50 37 13 0 0 0 0
.....................................................................................TAGAACTTTGATGTCAGCCCATTG.................................................... 24 0 2 18.50 37 36 1 0 0 0 0
...........TAGAAGTCCCCAAAAAAAAGCTGTTCG........................................................................................................................... 27 0 2 12.00 24 19 4 0 1 0 0
.....................................................................................TAGAACTTTGATGTCAGCCCATTGCTTC................................................ 28 0 2 11.50 23 19 4 0 0 0 0
...........TAGAAGTCCCCAAAAAAAAGCTGT.............................................................................................................................. 24 0 2 8.00 16 13 2 0 1 0 0
......................................................................................AGAACTTTGATGTCAGCCCATTGCT.................................................. 25 0 2 7.50 15 15 0 0 0 0 0
...........TAGAAGTCCCCAAAAAAAAGCTGTTC............................................................................................................................ 26 0 2 4.50 9 6 3 0 0 0 0
............................................................................................TTGATGTCAGCCCATTGCTTCTTTG............................................ 25 0 3 4.33 13 12 0 1 0 0 0
......................................................................................AGAACTTTGATGTCAGCCCATTGC................................................... 24 0 2 4.00 8 8 0 0 0 0 0
............................................................................................TTGATGTCAGCCCATTGCTTCTTTGAA.......................................... 27 0 2 3.50 7 7 0 0 0 0 0
.....................................................................................TAGAACTTTGATGTCAGCCCATTGCC.................................................. 26 1 2 3.50 7 1 6 0 0 0 0
...........TAGAAGTCCCCAAAAAAAAGCTGTTCGCT......................................................................................................................... 29 0 2 3.50 7 6 1 0 0 0 0
........................................TTGCAACTTTTTAGTGGCTTCTGATA............................................................................................... 26 0 2 2.50 5 5 0 0 0 0 0
.........................................TGCAACTTTTTAGTGGCTTCTGATA............................................................................................... 25 0 2 2.50 5 5 0 0 0 0 0
.........................................TGCAACTTTTTAGTGGCTTCTGATATC............................................................................................. 27 0 2 2.00 4 3 1 0 0 0 0
............................................................................................TTGATGTCAGCCCATTGCTTCTTTGA........................................... 26 0 2 2.00 4 4 0 0 0 0 0
.....................................................................................TAGTACTTTGATGTCAGCCCATTGC................................................... 25 1 2 2.00 4 0 4 0 0 0 0
............AGAAGTCCCCAAAAAAAAGCTGTT............................................................................................................................. 24 0 2 1.50 3 3 0 0 0 0 0
............AGAAGTCCCCAAAAAAAAGCTGTTCGC.......................................................................................................................... 27 0 2 1.50 3 3 0 0 0 0 0
.....................................................................................TAGAACTTTGATGTCAGCCCATTGCTC................................................. 27 1 2 1.50 3 3 0 0 0 0 0
.......................................TTTGCAACTTTTTAGTGGCTTCTGATA............................................................................................... 27 0 2 1.50 3 2 1 0 0 0 0
.....................................................................................TAGAACTTTGATGTCAGCCCATT..................................................... 23 0 2 1.50 3 1 2 0 0 0 0
.....................................................................................TAGAACTTTGAAGTCAGCCCATTGCT.................................................. 26 1 2 1.50 3 3 0 0 0 0 0
.....................................................................................TAGAACTTTGATGTCAGCCCATTGCTT................................................. 27 0 2 1.50 3 3 0 0 0 0 0
..................................................................................................................TTGAAAGCTGAAGGTTTTCAGGCAAGTG................... 28 0 2 1.50 3 3 0 0 0 0 0
.....................................................................................TAGAACTTTGATGTCAGCCCATTGG................................................... 25 1 2 1.00 2 1 1 0 0 0 0
.......................................................................TCCAGCACAGACAATAGAACT..................................................................... 21 0 2 1.00 2 1 1 0 0 0 0
............................................................................................TTGATGTCAGCCCATTGCTTCTTTGAAA......................................... 28 0 2 1.00 2 2 0 0 0 0 0
..................................................................................................................TTGAAAGCTGAAGGTTTTCAGGCAAG..................... 26 0 2 1.00 2 2 0 0 0 0 0
...............................................................ATAACGGCTTCAGCACAAA............................................................................... 19 3 20 0.75 15 12 0 0 1 0 2
.............................................................................................TGATGTCAGCCCATTGCTTCTTTG............................................ 24 0 3 0.67 2 2 0 0 0 0 0
...........TAGAAGTCCCCAAAAAAAAGCTGTC............................................................................................................................. 25 1 2 0.50 1 0 1 0 0 0 0
...........AAGAAGTCCCCAAAAAAAAGCTGTT............................................................................................................................. 25 1 2 0.50 1 0 1 0 0 0 0
...............................................................................................................TCTTTGAAAGCTGAAGGTTTTCA........................... 23 0 2 0.50 1 1 0 0 0 0 0
...........TAGAAGTCCCCGAAAAAAAGCTGTT............................................................................................................................. 25 1 2 0.50 1 1 0 0 0 0 0
....................................................................................ATAGAACTTTGATGTCAGCCCATTG.................................................... 25 0 2 0.50 1 1 0 0 0 0 0
.....................................................................................TACAACTTTGATGTCAGCCCATTGC................................................... 25 1 2 0.50 1 0 1 0 0 0 0
.....................................................................................TAGAACTTTGCTGTCAGCCCATTGCT.................................................. 26 1 2 0.50 1 1 0 0 0 0 0
...........TAGAAGTCCCCAAAAAAAAGCTGTTCGCC......................................................................................................................... 29 1 2 0.50 1 0 1 0 0 0 0
...........TAGAAGTCACCAAAAAAAAGCTGCT............................................................................................................................. 25 2 2 0.50 1 0 1 0 0 0 0
.....................................................................................GAGAACTTTGATGTCAGCCCATTGC................................................... 25 1 2 0.50 1 0 1 0 0 0 0
..................................................................TCGGCTCCAGCACAGACAATAGAA....................................................................... 24 0 2 0.50 1 1 0 0 0 0 0
.....................................................................................TCGAACTTTGATGTCAGCCCATTGC................................................... 25 1 2 0.50 1 0 1 0 0 0 0
.....................................................................................TAGAACTTTGATGTCAGCCCATTGCTA................................................. 27 1 2 0.50 1 1 0 0 0 0 0
..................................................TTAGTGGCTTCTGATATCGGCTCCAGCAC.................................................................................. 29 0 2 0.50 1 1 0 0 0 0 0
..............................................................................................................TTCTTTGAAAGCTGAAGGTTTTCA........................... 24 0 2 0.50 1 1 0 0 0 0 0
...........TACAAGTCCCCAAAAAAAAGCTGTTCGC.......................................................................................................................... 28 1 2 0.50 1 0 1 0 0 0 0
.....................................................................................TAGTACTTTGATGTCAGCCCATTGCT.................................................. 26 1 2 0.50 1 0 1 0 0 0 0
....................................................AGTGGCTTCTGATATCGGCTCCAGC.................................................................................... 25 0 2 0.50 1 1 0 0 0 0 0
............................................................................................TGGATGTCAGCCCATTGCTTCTTTGAA.......................................... 27 1 2 0.50 1 0 1 0 0 0 0
..................................TTCGCTTTGTAACTTTTTGGTGGC....................................................................................................... 24 2 2 0.50 1 0 1 0 0 0 0
............................................................................CACAGACAATAGAACTTTGATGTCAGC.......................................................... 27 0 2 0.50 1 0 1 0 0 0 0
.........................................................................................ACTTTGATGTCAGCCCATTGCT.................................................. 22 0 2 0.50 1 1 0 0 0 0 0
.....................................................................................TAGAACTTTGATGTCAGCCC........................................................ 20 0 2 0.50 1 0 1 0 0 0 0
...............................................................................................................TCTTTGAAAGCTGAAGGTTTTCAGGCAAG..................... 29 0 2 0.50 1 1 0 0 0 0 0
.....................................................................................TAGAACTTTGATTTCAGCCCATTGCT.................................................. 26 1 2 0.50 1 1 0 0 0 0 0
...................................................................................AATAGAACTTTGATGTCAGCCCATTGC................................................... 27 0 2 0.50 1 1 0 0 0 0 0
...........TAGAAGTCCCCAAAAAAAAGC................................................................................................................................. 21 0 2 0.50 1 1 0 0 0 0 0
...........TAGAAGTCCCCAAAAAAAAGCTGTTCAA.......................................................................................................................... 28 2 2 0.50 1 1 0 0 0 0 0
.....................................................................................TAGAACTCTGATGTCAGCCCATTGCTTC................................................ 28 1 2 0.50 1 0 1 0 0 0 0
...................................................TAGTGGCTTCTGATATCGGCTCCAGCAC.................................................................................. 28 0 2 0.50 1 1 0 0 0 0 0
.......................................TTTGCAACTTTTTAGTGGCTTCTGA................................................................................................. 25 0 2 0.50 1 1 0 0 0 0 0
.................................................TTTAGTGGCTTCTGATATCGG........................................................................................... 21 0 2 0.50 1 1 0 0 0 0 0
............AGAAGTCCCCAAAAAAAAGCTGT.............................................................................................................................. 23 0 2 0.50 1 1 0 0 0 0 0
..................................................................................................................TTGAAAGCTGAAGGTTTTCAGGC........................ 23 0 2 0.50 1 1 0 0 0 0 0
.....................................................................................TAGAACTTTGAGGTCAGCCCATTGC................................................... 25 1 2 0.50 1 1 0 0 0 0 0
...............................................................................................................TCTTTGAAAGCTGAAGGTTTTCAGGCA....................... 27 0 2 0.50 1 1 0 0 0 0 0
...............................................................................AGACAATAGAACTTTGATGTCAGCCC........................................................ 26 0 2 0.50 1 1 0 0 0 0 0
.................................................................................ACCATAGAACTTTGATGTCAGACC........................................................ 24 2 2 0.50 1 0 1 0 0 0 0
..........................................................................................................................TGAAGGTTTTCAGGCAAGTGTT................. 22 0 2 0.50 1 1 0 0 0 0 0
.....................................................................................TAGAACTTTGATGTCGGCCCATTGCT.................................................. 26 1 2 0.50 1 1 0 0 0 0 0
.....................................................................................TAGAACTTTGATGTCAGCCCATTGAC.................................................. 26 2 2 0.50 1 0 1 0 0 0 0
.....................................................................................TAGAAATTTGATGTCAGCCCATTGC................................................... 25 1 2 0.50 1 0 0 1 0 0 0
....................................................................................ATAGAACTTTGATGTCAGCCCATTGCTCC................................................ 29 1 2 0.50 1 1 0 0 0 0 0
.....................................................................................TAGAACTTTGATGTCAGCCCATTGCA.................................................. 26 1 2 0.50 1 1 0 0 0 0 0
............................................................................................TTGATGTCAGCCCATTGCTTCTTTGAAC......................................... 28 1 2 0.50 1 1 0 0 0 0 0
.............GAAGTCCCCCAAAAAAAGCTGTTCGC.......................................................................................................................... 26 1 2 0.50 1 0 1 0 0 0 0
.....................................................................................TACAACTTTGCTGTCAGCCCATTGCTTC................................................ 28 2 2 0.50 1 0 1 0 0 0 0
.....................................................................................TAGAACTTTGAGGTCAGCCCATTGCT.................................................. 26 1 2 0.50 1 1 0 0 0 0 0
...................................................................................CCTAGAACTTTGATGTCAGCCCATTGC................................................... 27 2 2 0.50 1 0 1 0 0 0 0
...................................................TAGTGGCTTCTGATATCGGCTCCAG..................................................................................... 25 0 2 0.50 1 1 0 0 0 0 0
.....................................................................................TGGAACTTTGATGTCAGCCCATTGCT.................................................. 26 1 2 0.50 1 0 1 0 0 0 0
............AGAAGTCCCCAAAAAAAAGCTG............................................................................................................................... 22 0 2 0.50 1 1 0 0 0 0 0
.....................................................................................TAGAACTTTGAGGTCAGCCCATTG.................................................... 24 1 2 0.50 1 1 0 0 0 0 0
............................................................................................TTGATGTCAGCCCATTGCTTCTTTGAAAG........................................ 29 0 2 0.50 1 1 0 0 0 0 0
...................................................................................................................TGAAAGCTGAAGGTTTTCAGGCAAGTG................... 27 0 2 0.50 1 1 0 0 0 0 0
.....................................................................................TAGAACTTTGATGTCAGCCCATC..................................................... 23 1 2 0.50 1 0 1 0 0 0 0
.....................................................................................TACAACTTTGATGTCAGCCCATTG.................................................... 24 1 2 0.50 1 0 1 0 0 0 0
...........TAGTAGTCCCCAAAAAAAAGCTGTTCGC.......................................................................................................................... 28 1 2 0.50 1 0 1 0 0 0 0
...........TAGAAGTCCCCAAAAAAAAGCTGTTCGT.......................................................................................................................... 28 1 2 0.50 1 1 0 0 0 0 0
.....................................................................................TAGAACTTTAATGTCAGCCCATTGC................................................... 25 1 2 0.50 1 1 0 0 0 0 0
.....................................................................................TAGAACTTTGATGTCAGCC......................................................... 19 0 2 0.50 1 0 1 0 0 0 0
............AGAAGTCCCCAAAAAAAAGCTGTTC............................................................................................................................ 25 0 2 0.50 1 1 0 0 0 0 0
...................................................TAGTGGCTTCTGATATCGGCTCCA...................................................................................... 24 0 2 0.50 1 1 0 0 0 0 0
........TTGTAGAAGTCCCCAAAAAAAAGCT................................................................................................................................ 25 0 2 0.50 1 1 0 0 0 0 0
.....................................................................................TGGAACTTTGATGTCAGCCCATTGCTTC................................................ 28 1 2 0.50 1 0 1 0 0 0 0
...........TAGAAGTCCCCAAAAAAAAGCTG............................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0 0
.....................................................................................TAGAACTTTGATGTCAGCCCATTGCTG................................................. 27 1 2 0.50 1 1 0 0 0 0 0
.............................................................................................TGATGTCAGCCCATTGCTTCTTTGA........................................... 25 0 2 0.50 1 1 0 0 0 0 0
...........TAGTAGTCCCCAAAAAGAAGCTGTTCGC.......................................................................................................................... 28 2 2 0.50 1 0 1 0 0 0 0
.................TCCCCAAAAAAAAGCTGTTCG........................................................................................................................... 21 0 2 0.50 1 1 0 0 0 0 0
..........................................GCAACTTTTTAGTGGCTTCTGATATC............................................................................................. 26 0 2 0.50 1 1 0 0 0 0 0
...................................................TAGTGGCTTCTGATATCGGCTCCAGCACA................................................................................. 29 0 2 0.50 1 1 0 0 0 0 0
....................................................................................TTAGAACTTTGATGTCAGCCCATTGC................................................... 26 1 2 0.50 1 1 0 0 0 0 0
.....................................................................................TACTACTTTGATGTCAGCCCATTGC................................................... 25 2 2 0.50 1 0 1 0 0 0 0
.....................................................................................TTGAACTTTGATGTCAGCCCATTGCT.................................................. 26 1 2 0.50 1 0 1 0 0 0 0
.......................................................................TCCAGCACAGACAATAGAACTTTGA................................................................. 25 0 2 0.50 1 1 0 0 0 0 0
...........TGGAAGTCCCCAAAAAAAAGCTGTTCGC.......................................................................................................................... 28 1 2 0.50 1 0 1 0 0 0 0
.....................................................................................TATAACTTTGATGTCAGCCCATTGC................................................... 25 1 2 0.50 1 1 0 0 0 0 0
.....................................................................................TAGAACTTTGATGCCAGCCCATTGCT.................................................. 26 1 2 0.50 1 1 0 0 0 0 0
...........TAGAAGTCCCCAAAAAAAATCTGTTCGC.......................................................................................................................... 28 1 2 0.50 1 0 1 0 0 0 0
...........................................CAACTTTTTAGTGGCTTCTGATATC............................................................................................. 25 0 2 0.50 1 1 0 0 0 0 0
...........TAGTAGTCCCCAAAAAAAAGCTGTTC............................................................................................................................ 26 1 2 0.50 1 0 1 0 0 0 0
.....................................................................................AAGAACTTTGATGTCAGCCCATTGC................................................... 25 1 2 0.50 1 0 1 0 0 0 0
...............................................TTTTTAGTGGCTTCTGATATCGGC.......................................................................................... 24 0 2 0.50 1 1 0 0 0 0 0
...........TAGAGGTCCCCAAAAAAAAGTTG............................................................................................................................... 23 2 3 0.33 1 0 1 0 0 0 0
..........................................................TTCTGATATCGGCTCCAGCACAGACATCT.......................................................................... 29 3 3 0.33 1 1 0 0 0 0 0
............................................................................................TTGATGTCAGCCCATTGCTTCTTTGG........................................... 26 1 3 0.33 1 1 0 0 0 0 0
..................................................................TCGGCTCCAGCACAGACAA............................................................................ 19 0 3 0.33 1 1 0 0 0 0 0
.....................................................................................TAGAACTTTGATGTCAACCCATTGCT.................................................. 26 1 3 0.33 1 0 1 0 0 0 0
....................................................TGGGGCTTCTGACATCGGCT......................................................................................... 20 3 8 0.13 1 0 0 0 0 1 0

Anti-sense strand reads

CCTTTTCGAACATCTTCAGGGGTTTTTTTTCGACAAGCGAAACGTTGAAAAATCACCGAAGACTATAGCCGAGGTCGTGTCTGTTATCTTGAAACTACAGTCGGGTAACGAAGAAACTTTCGACTTCCAAAAGTCCGTTCACAACGGCCTACTTGAGGAGC
************************************..(((((.(((.....((((((...((((((((((......................)))))))))).)))))).....))))))))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body
........................................................................GGTCGTGTCTGTTATCTTGAAAC.................................................................. 23 0 2 7.00 14 14 0 0
.......................................................................AGGTCGTGTCTGTTATCTTGAAAC.................................................................. 24 0 2 2.00 4 3 1 0
.....................................................................CGAGGTCGTGTCTGTTATCTTGAAAC.................................................................. 26 0 2 1.00 2 2 0 0
CCTTTTCGAACATCTTCAGGG............................................................................................................................................ 21 0 2 1.00 2 1 1 0
.........................................................................GTCGTGTCTGTTATCTTGAAAC.................................................................. 22 0 2 1.00 2 1 1 0
......................................................................GAGGTCGTGTCTGTTATCTTGAAAC.................................................................. 25 0 2 1.00 2 1 1 0
........................................................................GGTCGTGTCTGTTATCTTGAAA................................................................... 22 0 2 1.00 2 2 0 0
..........................................................................TCGTGTCTGTTATCTTGAAAC.................................................................. 21 0 2 1.00 2 2 0 0
....................................................................CCGAGGTCGTGTCTGTTATCTTGAAAC.................................................................. 27 0 2 0.50 1 1 0 0
...........................................................................CGTGTCTGTTATCTTGAAAC.................................................................. 20 0 2 0.50 1 0 1 0
CTTTTTCGAACATCTTCAGGG............................................................................................................................................ 21 1 2 0.50 1 0 1 0
.........................................................................GTCGTGTCTGTTATCTTGAAGC.................................................................. 22 1 2 0.50 1 0 1 0
......................................................................GAGGTCGTGTCTGTTATCTTGAAACT................................................................. 26 0 2 0.50 1 1 0 0
..................................................................AGCCGAGGTCGTGTCTGTTATCTTGAAAC.................................................................. 29 0 2 0.50 1 1 0 0
........................................................................GGTCGTGTCTGTTATCTTGAA.................................................................... 21 0 2 0.50 1 1 0 0
...................................................................GCCGAGGTCGTGTCTGTTATCTTGAAAC.................................................................. 28 0 2 0.50 1 1 0 0
...........................................................................CATGTCTGTTATCTTGAAAC.................................................................. 20 1 2 0.50 1 0 1 0
CCTTTTCGAACATCTTCAGTG............................................................................................................................................ 21 1 2 0.50 1 0 1 0
.........................................................................GTCGTGTCTGTTATCTTG...................................................................... 18 0 2 0.50 1 0 1 0
................................................................................................................GAAACTTTCGACTTCCAAAAGTCCGT....................... 26 0 2 0.50 1 1 0 0
................................................................................CTGTTATCTTGAAACTACAGTC........................................................... 22 0 2 0.50 1 1 0 0
.......................................................................................................AGTAACGAAGAAGCTTTCAA...................................... 20 3 14 0.07 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6414:9395-9555 + dmo_235 GGAAAAGCTTGTAGAAGTCCCCAAAAAAAAGCTGTTCGCTTTGCAACTTTTTAGTGGCTTCTGATATCGGCTCCAGCACAGACAATAGAACTTTGATGTCAGCCCATTGCTTCTTTGAAAGCTGAAGGTTTTCAGGCAAGTGTTGCCGGATGAACTCCTC-------G
droWil2 scf2_1100000004423:56476-56643 + ACCACAGTTTGTAAAAGTCACCCATAAATAATTCGGCGCTTTGTAGCTTGATAGTAGCTGTGTATGCCGGTTCCAGGGTAGTAACGAGTCTTTTTAGGTCATCCCACTCAGTCGTTGTTAGCTTCATTGAACACTTGAGGCGCCTCTCACAAAAGTCTTCAAAGTTCT
dp5 Unknown_singleton_3993:1469-1628 + AGAAAAGCTTGTAGAAGTC-CCAAAAAAAAGTTGTTCGCTTTGCAACTTTTTGGTGGCTCCAGAAATCGGCTCCAGCACATACAGCAGCACTTTGATGTTGGCCCATTGCTTTTCTGTTAGCAGCAAGTTTTGAGGCAAGTGTTGCCGGATGAACTCCTC-------G
droPer2 scaffold_30:944269-944428 - AGAAAAGCTTGTAGAAGTCCCCAAAA-AAAGTTGTTCGCTTTGTAACTTTTTGGTGGCTCCAGAAATCGGCTCCAGCACAGACAGCAGCACTTTGATATCAGTCCATTGCTTTTCTGGTAGCTGCAAGTTTTGAGGCAAGTGTTGCTGGATGAACTCCTC-------G
droBip1 scf7180000393425:3819-3972 - ACAAAAGCTTGAAAAAGTCTCCAAAA-------GTTCGCTCTGCAATTTTTTGGTAGCCACGGATATCGGCTCCAGCACAGAGAGCATTGCTTTGATGTCAGTCTATTGCTGCTCCGTTAGATGCCGAATTGGTGGCAAATGTTGGTGTATGAATTCCTC-------G
droKik1 scf7180000301632:3211-3371 - ACAAAAGCTTGAAAAAGTCGCCAAAATAAAGCTGTTCGCTATGCAATTTTTTGGTAGCCACGGATATCGGCTCCAGCACAGACAGCAGTGCTTTGATGTCAGTCCATTGCTGGTCCGTTAGTTGGCAAATTGGTGGCAAGAGTTGGTGTATGAATTCCTC-------A
droFic1 scf7180000453782:840317-840477 + ACAAAAGCTTGAAAAAGTCGCCAAAATAAAGCTGTTCGCTCTGAAATTTTTTGGTAGCCACGGATACCGGCTCCAGCACAGACAGCAGTGCTTTGATTTCAGTCCATTGCTGCTCCGTTAGTTGGCGAATTGGTGGCAAGTGTTGGTGTATAAATTCCTC-------G
droEle1 scf7180000490203:5787-5930 - GCAAAATTTTGTAAAAATCTCCGAGACACATTTGCTCGTTTTGGAGCTTCTGAGTAGCATCAAAAATGGGATGAAGTGTCCCTACCAAGAATTTGGTGTCTGCCCACTGCAAATTGGACTACTGCGTGGTTTTAGGCAGGTGCT------------------------
droTak1 scf7180000415436:1155-1315 - GCCAAAGCTTGTAAAAGTCACCAAAATGTAGTTGTTCGCTTTGTAATTTTTGGGTTGCTTTGAAAATTGGCTCTAGTACAGTTAGAAGCAGTTCTATGTCCGTCCATTGGGAGATCGATAACTTCATATTCTCTTTGAGGTGGTCCTCGGTAAACTTTTT-------A
droEug1 scf7180000409560:739-897 - ACAAAAGCTT--AAAAGTCGCCAAAATAAAGCTGTTCGCTCTGCAATTTTTTGGTAGCCACGGATATCGGCTCCAGCACAGACAGCAGTGCTTTGATGTCAGTCCATTGCTGCTCCGTTAGTTGGCGAATTGGTGGCAAGTGTTGGTGTATGAATTCCTC-------G

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
GGAAAAGCTTGTAGAAGTCCCCAAAAAAAAGCTGTTCGCTTTGCAACTTTTTAGTGGCTTCTGATATCGGCTCCAGCACAGACAATAGAACTTTGATGTCAGCCCATTGCTTCTTTGAAAGCTGAAGGTTTTCAGGCAAGTGTTGCCGGATGAACTCCTC-------GSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.....................................................................................TAGAACTTTGATGTCAGCCCATTGC..........................................................252133.502671751400780
.....................................................................................TAGAACTTTGATGTCAGCCCATTGCT.........................................................26287.00174156000180
...........TAGAAGTCCCCAAAAAAAAGCTGTT....................................................................................................................................25226.005236100150
...........TAGAAGTCCCCAAAAAAAAGCTGTTCGC.................................................................................................................................28225.005037000130
.....................................................................................TAGAACTTTGATGTCAGCCCATTG...........................................................24218.50373600010
...........TAGAAGTCCCCAAAAAAAAGCTGTTCG..................................................................................................................................27212.00241900041
.....................................................................................TAGAACTTTGATGTCAGCCCATTGCTTC.......................................................28211.50231900040
...........TAGAAGTCCCCAAAAAAAAGCTGT.....................................................................................................................................2428.00161300021
......................................................................................AGAACTTTGATGTCAGCCCATTGCT.........................................................2527.50151500000
...........TAGAAGTCCCCAAAAAAAAGCTGTTC...................................................................................................................................2624.509600030
............................................................................................TTGATGTCAGCCCATTGCTTCTTTG...................................................2534.33131210000
......................................................................................AGAACTTTGATGTCAGCCCATTGC..........................................................2424.008800000
............................................................................................TTGATGTCAGCCCATTGCTTCTTTGAA.................................................2723.507700000
.....................................................................................TAGAACTTTGATGTCAGCCCATTGCC.........................................................2623.507100060
...........TAGAAGTCCCCAAAAAAAAGCTGTTCGCT................................................................................................................................2923.507600010
........................................TTGCAACTTTTTAGTGGCTTCTGATA......................................................................................................2622.505500000
.........................................TGCAACTTTTTAGTGGCTTCTGATA......................................................................................................2522.505500000
.........................................TGCAACTTTTTAGTGGCTTCTGATATC....................................................................................................2722.004300010
............................................................................................TTGATGTCAGCCCATTGCTTCTTTGA..................................................2622.004400000
............AGAAGTCCCCAAAAAAAAGCTGTT....................................................................................................................................2421.503300000
............AGAAGTCCCCAAAAAAAAGCTGTTCGC.................................................................................................................................2721.503300000
.....................................................................................TAGAACTTTGATGTCAGCCCATTGCTC........................................................2721.503300000
.......................................TTTGCAACTTTTTAGTGGCTTCTGATA......................................................................................................2721.503200010
.....................................................................................TAGAACTTTGATGTCAGCCCATT............................................................2321.503100020
.....................................................................................TAGAACTTTGATGTCAGCCCATTGCTT........................................................2721.503300000
..................................................................................................................TTGAAAGCTGAAGGTTTTCAGGCAAGTG..........................2821.503300000
.....................................................................................TAGAACTTTGATGTCAGCCCATTGG..........................................................2521.002100010
.......................................................................TCCAGCACAGACAATAGAACT............................................................................2121.002100010
............................................................................................TTGATGTCAGCCCATTGCTTCTTTGAAA................................................2821.002200000
..................................................................................................................TTGAAAGCTGAAGGTTTTCAGGCAAG............................2621.002200000
.............................................................................................TGATGTCAGCCCATTGCTTCTTTG...................................................2430.672200000
...........TAGAAGTCCCCAAAAAAAAGCTGTC....................................................................................................................................2520.501000010
...............................................................................................................TCTTTGAAAGCTGAAGGTTTTCA..................................2320.501100000
....................................................................................ATAGAACTTTGATGTCAGCCCATTG...........................................................2520.501100000
...........TAGAAGTCCCCAAAAAAAAGCTGTTCGCC................................................................................................................................2920.501000010
..................................................................TCGGCTCCAGCACAGACAATAGAA..............................................................................2420.501100000
.....................................................................................TAGAACTTTGATGTCAGCCCATTGCTA........................................................2720.501100000
..................................................TTAGTGGCTTCTGATATCGGCTCCAGCAC.........................................................................................2920.501100000
..............................................................................................................TTCTTTGAAAGCTGAAGGTTTTCA..................................2420.501100000
....................................................AGTGGCTTCTGATATCGGCTCCAGC...........................................................................................2520.501100000
............................................................................CACAGACAATAGAACTTTGATGTCAGC.................................................................2720.501000010
.........................................................................................ACTTTGATGTCAGCCCATTGCT.........................................................2220.501100000
.....................................................................................TAGAACTTTGATGTCAGCCC...............................................................2020.501000010
...............................................................................................................TCTTTGAAAGCTGAAGGTTTTCAGGCAAG............................2920.501100000
...................................................................................AATAGAACTTTGATGTCAGCCCATTGC..........................................................2720.501100000
...........TAGAAGTCCCCAAAAAAAAGC........................................................................................................................................2120.501100000
...........TAGAAGTCCCCAAAAAAAAGCTGTTCAA.................................................................................................................................2820.501100000
...................................................TAGTGGCTTCTGATATCGGCTCCAGCAC.........................................................................................2820.501100000
.......................................TTTGCAACTTTTTAGTGGCTTCTGA........................................................................................................2520.501100000
.................................................TTTAGTGGCTTCTGATATCGG..................................................................................................2120.501100000
............AGAAGTCCCCAAAAAAAAGCTGT.....................................................................................................................................2320.501100000
..................................................................................................................TTGAAAGCTGAAGGTTTTCAGGC...............................2320.501100000
...............................................................................................................TCTTTGAAAGCTGAAGGTTTTCAGGCA..............................2720.501100000
...............................................................................AGACAATAGAACTTTGATGTCAGCCC...............................................................2620.501100000
..........................................................................................................................TGAAGGTTTTCAGGCAAGTGTT........................2220.501100000
.....................................................................................TAGAACTTTGATGTCAGCCCATTGAC.........................................................2620.501000010
.....................................................................................TAGAACTTTGATGTCAGCCCATTGCA.........................................................2620.501100000
............................................................................................TTGATGTCAGCCCATTGCTTCTTTGAAC................................................2820.501100000
...................................................TAGTGGCTTCTGATATCGGCTCCAG............................................................................................2520.501100000
............AGAAGTCCCCAAAAAAAAGCTG......................................................................................................................................2220.501100000
............................................................................................TTGATGTCAGCCCATTGCTTCTTTGAAAG...............................................2920.501100000
...................................................................................................................TGAAAGCTGAAGGTTTTCAGGCAAGTG..........................2720.501100000
.....................................................................................TAGAACTTTGATGTCAGCCCATC............................................................2320.501000010
...........TAGAAGTCCCCAAAAAAAAGCTGTTCGT.................................................................................................................................2820.501100000
.....................................................................................TAGAACTTTGATGTCAGCC................................................................1920.501000010
............AGAAGTCCCCAAAAAAAAGCTGTTC...................................................................................................................................2520.501100000
...................................................TAGTGGCTTCTGATATCGGCTCCA.............................................................................................2420.501100000
........TTGTAGAAGTCCCCAAAAAAAAGCT.......................................................................................................................................2520.501100000
...........TAGAAGTCCCCAAAAAAAAGCTG......................................................................................................................................2320.501100000
.....................................................................................TAGAACTTTGATGTCAGCCCATTGCTG........................................................2720.501100000
.............................................................................................TGATGTCAGCCCATTGCTTCTTTGA..................................................2520.501100000
.................TCCCCAAAAAAAAGCTGTTCG..................................................................................................................................2120.501100000
..........................................GCAACTTTTTAGTGGCTTCTGATATC....................................................................................................2620.501100000
...................................................TAGTGGCTTCTGATATCGGCTCCAGCACA........................................................................................2920.501100000
.......................................................................TCCAGCACAGACAATAGAACTTTGA........................................................................2520.501100000
...........................................CAACTTTTTAGTGGCTTCTGATATC....................................................................................................2520.501100000
...............................................TTTTTAGTGGCTTCTGATATCGGC.................................................................................................2420.501100000
..........................................................TTCTGATATCGGCTCCAGCACAGACATCT.................................................................................2930.331100000
............................................................................................TTGATGTCAGCCCATTGCTTCTTTGG..................................................2630.331100000
..................................................................TCGGCTCCAGCACAGACAA...................................................................................1930.331100000
droWil2
ACCACAGTTTGTAAAAGTCACCCATAAATAATTCGGCGCTTTGTAGCTTGATAGTAGCTGTGTATGCCGGTTCCAGGGTAGTAACGAGTCTTTTTAGGTCATCCCACTCAGTCGTTGTTAGCTTCATTGAACACTTGAGGCGCCTCTCACAAAAGTCTTCAAAGTTCTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................................................TGTTAGCTTCATTGAACACTTGAGG............................25438.0015204201100
.........TGTAAAAGTCACCCATAAATAATTCGG....................................................................................................................................27422.00880770110
.......................................................................TCCAGGGTAGTAACGAGTCTTTTTAGG......................................................................27420.25810280530
...........................................................................................................TCAGTCGTTGTTAGCTTCATTGAACACT.................................28416.00642280340
...........................................TAGCTTGATAGTAGCTGTGTATGCCGG..................................................................................................2757.80390250140
.........................................TGTAGCTTGATAGTAGCTGTGTATGC.....................................................................................................2666.0036030330
.........................................TGTAGCTTGATAGTAGCTGTGTATG......................................................................................................2565.83350151190
.................................................................................TAACGAGTCTTTTTAGGTCATCCCAC.............................................................2655.40273130110
..................................................................................................................TTGTTAGCTTCATTGAACACTTGAGG............................2645.0020040160
............................................AGCTTGATAGTAGCTGTGTATGCCGG..................................................................................................2654.60230100130
...........................................................................................................TCAGTCGTTGTTAGCTTCATTGAACA...................................2644.2517010070
............................................................................................................................................CGCCTCTCACAAAAGTCTTCAAAGTTCT2824.00803050
.........................................................................CAGGGTAGTAACGAGTCTTTTTAGG......................................................................2543.5014000122
...................................................TAGTAGCTGTGTATGCCGGTTCCAG............................................................................................2563.5021060150
.........TGTAAAAGTCACCCATAAATAATTCGGC...................................................................................................................................2843.001209030
.....................................................................................................TCCCACTCAGTCGTTGTTAGCTTCAT.........................................2662.8317012050
............................................................................................................CAGTCGTTGTTAGCTTCATTGAACACT.................................2742.501004060
...........................................TAGCTTGATAGTAGCTGTGTATGCCG...................................................................................................2652.4012010020
.................................................................................TAACGAGTCTTTTTAGGTCATCCCACT............................................................2752.401203090
..............................................................................TAGTAACGAGTCTTTTTAGGTCATCC................................................................2642.25907020
........................TAAATAATTCGGCGCTTTGTAGCT........................................................................................................................2442.00805030
..............................................................................TAGTAACGAGTCTTTTTAGGTCATCCCAC.............................................................2942.00808000
........................................................................CCAGGGTAGTAACGAGTCTTTTTAGG......................................................................2641.75704030
..............................................................................TAGTAACGAGTCTTTTTAGGTCATCCCA..............................................................2841.75704030
.......................................................................TCCAGGGTAGTAACGAGTCTTTTTAGGT.....................................................................2841.75706010
.........................................TGTAGCTTGATAGTAGCTGTGTATGCCG...................................................................................................2851.60807100
...........................................................................................TTTTAGGTCATCCCACTCAGTCGT.....................................................2461.50906030
...............................................................................................................................TGAACACTTGAGGCGCCTCTCACAAAAG.............2821.50303000
....................................................................................................................GTTAGCTTCATTGAACACTTGAGG............................2441.50606000
.............................................................................................................AGTCGTTGTTAGCTTCATTGAACACT.................................2641.50601050
......................................................TAGCTGTGTATGCCGGTTCCAGGG..........................................................................................2461.50908010
...........................................................................................................................TCATTGAACACTTGAGGCGCCTCT.....................2431.33413000
...........................................TAGCTTGATAGTAGCTGTGTATGC.....................................................................................................2461.33801070
...........................................................................................................................TCATTGAACACTTGAGGCGCCTCTCA...................2631.33422000
.........................................................................CAGGGTAGTAACGAGTCTTTTTAGGT.....................................................................2641.25501040
.........TGTAAAAGTCACCCATAAATAATTCGGCG..................................................................................................................................2941.25505000
...........................................................................................................TCAGTCGTTGTTAGCTTCATTGAACAC..................................2741.25505000
.....................................................................................................TCCCACTCAGTCGTTGTTAGCTTCATTG.......................................2851.20603030
..................................................................................................TCATCCCACTCAGTCGTTGTTAGCT.............................................2561.17704030
..........................................................................................TTTTTAGGTCATCCCACTCAGTCGT.....................................................2561.17701060
........................................................................................................CACTCAGTCGTTGTTAGCTTCATTGAA.....................................2741.00402020
...................................................TAGTAGCTGTGTATGCCGGTTCCAGG...........................................................................................2661.00604020
........................................................................................................CACTCAGTCGTTGTTAGCTTCATTG.......................................2551.00503020
................................................TGATAGTAGCTGTGTATGCCGGTTCC..............................................................................................2651.00505000
..............................................................................TAGTAACGAGTCTTTTTAGGTCATCCC...............................................................2741.00402020
.........................................TGTAGCTTGATAGTAGCTGTGTATGCC....................................................................................................2751.00502030
..............................................................................................................GTCGTTGTTAGCTTCATTGAACACT.................................2541.00403010
............................................................................................................CAGTCGTTGTTAGCTTCATTGAACA...................................2551.00502030
...................................................................................................................................CACTTGAGGCGCCTCTCACAAAAGTCT..........2721.00202000
.......................................................................TCCAGGGTAGTAACGAGTCTTTTTAG.......................................................................2641.00402020
..........GTAAAAGTCACCCATAAATAATTCGG....................................................................................................................................2641.00404000
......................................................................TTCCAGGGTAGTAACGAGTCTTTT..........................................................................2451.00505000
.........TGTAAAAGTCACCCATAAATAATTCG.....................................................................................................................................2651.00502030
........................................TTGTAGCTTGATAGTAGCTGTGTATGC.....................................................................................................2760.83502030
.................................................................................TAACGAGTCTTTTTAGGTCATCCCA..............................................................2550.80402020
............................................AGCTTGATAGTAGCTGTGTATGCCG...................................................................................................2550.80401030
...................................................................................................................TGTTAGCTTCATTGAACACTTGAG.............................2440.75301020
...............................................................................................................TCGTTGTTAGCTTCATTGAACACTTG...............................2640.75303000
......................................................................TTCCAGGGTAGTAACGAGTCTTTTTAGG......................................................................2840.75303000
...................................................................................................................TGTTAGCTTCATTGAACACTTGAGGC...........................2640.75303000
.................................CGGCGCTTTGTAGCTTGATAGTAGC..............................................................................................................2540.75301020
..............................................................................................TAGGTCATCCCACTCAGTCGTTGTTAG...............................................2760.67401030
...............................................................................................................................................CTCTCACAAAAGTCTTCAAAGTTCT2530.67200020
...........................................................................................TTTTAGGTCATCCCACTCAGTCGTTG...................................................2660.67430010
..........................................................TGTGTATGCCGGTTCCAGGGTAGTA.....................................................................................2560.67401030
..............................................................................................TAGGTCATCCCACTCAGTCGT.....................................................2160.67403010
...........................................................................................................................TCATTGAACACTTGAGGCGCCTC......................2330.67211000
........................................TTGTAGCTTGATAGTAGCTGTGTATG......................................................................................................2660.67401030
................................................TGATAGTAGCTGTGTATGCCGGT.................................................................................................2360.67401030
.........................................TGTAGCTTGATAGTAGCTGTGTATGCTA...................................................................................................2860.67400040
...........................................TAGCTTGATAGTAGCTGTGTATGCC....................................................................................................2550.60302010
............................................AGCTTGATAGTAGCTGTGTATGCCGGT.................................................................................................2750.60302010
...........................................TAGCTTGATAGTAGCTGTGTATGCCT...................................................................................................2650.60301020
..............................................................TATGCCGGTTCCAGGGTAGTAACGAG................................................................................2650.60302010
...........................................................................................................TCAGTCGTTGTTAGCTTCATTGA......................................2350.60300030
......................CATAAATAATTCGGCGCTTTGTAGCT........................................................................................................................2640.50202000
.........................................................................CAGGGTAGTAACGAGTCTTTTTAGGTC....................................................................2740.50200020
...............................................................................AGTAACGAGTCTTTTTAGGTCATCCCAC.............................................................2840.50202000
.......................................................................................................................................TGAGGCGCCTCTCACAAAAGTCTTC........2520.50100010
......................................................TAGCTGTGTATGCCGGTTCCAGGGT.........................................................................................2560.50302010
.....................................................................................................TCCCACTCAGTCGTTGTTAGCTTCA..........................................2560.50302010
........................................................................CCAGGGTAGTAACGAGTCTTTTTAGGT.....................................................................2740.50201010
................................................................................................................................GAACACTTGAGGCGCCTCTCACAAAAG.............2720.50101000
.................TCACCCATAAATAATTCGGCGCTTTG.............................................................................................................................2640.50202000
.......TTTGTAAAAGTCACCCATAAATAATTCGG....................................................................................................................................2940.50202000
...............................................................................................................TCGTTGTTAGCTTCATTGAACACT.................................2440.50202000
...........................................................................................TTTTAGGTCATCCCACTCAGTCGTTGT..................................................2760.50301020
..................................................................................................TCATCCCACTCAGTCGTTGTTAGC..............................................2460.50300120
...........................................................................................................TCAGTCGTTGTTAGCTTCATTGAAC....................................2540.50201010
.....................................................................................................TCCCACTCAGTCGTTGTTAGCTTCATT........................................2760.50301020
.......................................................................................................................................TGAGGCGCCTCTCACAAAAGTCTTCAAAG....2920.50101000
.................................................................................................................GTTGTTAGCTTCATTGAACACTTGAGG............................2740.50200020
...................................................................................................................TGTTAGCTTCATTGAACACTTGAGGCG..........................2740.50202000
............................................................................GGTAGTAACGAGTCTTTTTAGGTCA...................................................................2540.50201010
......................................................................................................................................TTGAGGCGCCTCTCACAAAAGTCT..........2420.50101000
............................................................................................TTTAGGTCATCCCACTCAGTCGTTGTTA................................................2860.50303000
...........TAAAAGTCACCCATAAATAATTCGGCGC.................................................................................................................................2840.50201010
......................................................TAGCTGTGTATGCCGGTTCCAGGGTAG.......................................................................................2760.50303000
...........................................................................GGGTAGTAACGAGTCTTTTTAGGTCA...................................................................2640.50202000
..........................................GTAGCTTGATAGTAGCTGTGTATGCCG...................................................................................................2750.40200020
..........................................GTAGCTTGATAGTAGCTGTGTATGCCGG..................................................................................................2850.40202000
...........................................TAGCTTGATAGTAGCTGTGTATGCCGGT.................................................................................................2850.40202000
.......................................................................TCCAGGGTAGTAACGAGTCTTTT..........................................................................2350.40202000
................................................TGATAGTAGCTGTGTATGCCGGTTC...............................................................................................2550.40200020
.......................................................................................................CCACTCAGTCGTTGTTAGCTTCATTG.......................................2650.40201010
................................................................TGCCGGTTCCAGGGTAGTAACGAGTC..............................................................................2650.40200020
...............................................................................................................................TGAACACTTGAGGCGCCTCTCACAA................2530.33101000
..................................................................................................TCATCCCACTCAGTCGTTGTTAGCTTCAT.........................................2960.33202000
.........................................................................................................................CTTCATTGAACACTTGAGGCGCCTC......................2530.33101000
......................................................TAGCTGTGTATGCCGGTTCCAGG...........................................................................................2360.33201010
............................................................................................TTTAGGTCATCCCACTCAGTCGTTGT..................................................2660.33202000
........................................................................................TCTTTTTAGGTCATCCCACTCAGTCGT.....................................................2760.33201010
..............................................................................................TAGGTCATCCCACTCAGTCGTTGT..................................................2460.33202000
.........................................TGTAGCTTGATAGTAGCTGTGTATGCTT...................................................................................................2860.33200110
...........................................................................................................................TCATTGAACACTTGAGGCGCCTCTCG...................2630.33110000
...................................................................................................CATCCCACTCAGTCGTTGTTAGCT.............................................2460.33201010
..........................................................................................................................TTCATTGAACACTTGAGGCGCCTCT.....................2530.33101000
...................................................................................................CATCCCACTCAGTCGTTGTTAGCTTCAT.........................................2860.33202000
................................................................................................................................................TCTCACAAAAGTCTTCAAAGTTCT2430.33101000
......................................................TAGCTGTGTATGCCGGTTCCAGGGTA........................................................................................2660.33202000
............................................................................................................................CATTGAACACTTGAGGCGCCTCTCAC..................2630.33100010
........................TAAATAATTCGGCGCTTTGTAGCTTGA.....................................................................................................................2730.33101000
..............................................................................................TAGGTCATCCCACTCAGTCGTTGTTAGC..............................................2860.33200020
...........................ATAATTCGGCGCTTTGTAGCTTGA.....................................................................................................................2430.33101000
...................................................TAGTAGCTGTGTATGCCGGTTCCAGGG..........................................................................................2760.33202000
....................................................AGTAGCTGTGTATGCCGGTTCCAG............................................................................................2460.33201010
.............................................................................................TTAGGTCATCCCACTCAGTCGTTGT..................................................2560.33200110
................................................................................................................CGTTGTTAGCTTCATTGAACACT.................................2340.25101000
........................TAAATAATTCGGCGCTTTGTAG..........................................................................................................................2240.25100010
........................TAAATAATTCGGCGCTTTGTAGC.........................................................................................................................2340.25100010
...............................................TTGATAGTAGCTGTGTATGCCGGTTC...............................................................................................2640.25101000
......................................................................................................................TAGCTTCATTGAACACTTGAGGCGCC........................2640.25101000
...........................................................................................................TCAGTCGTTGTTAGCTTCATTGAACACA.................................2840.25100010
...........TAAAAGTCACCCATAAATAATTCGGCG..................................................................................................................................2740.25101000
..............................................................................TAGTAACGAGTCTTTTTAGGTCATC.................................................................2540.25101000
..............AAGTCACCCATAAATAATTCGG....................................................................................................................................2240.25100010
.......................................................................................................................AGCTTCATTGAACACTTGAGGCGCCT.......................2640.25101000
..............................................................................TAGTAACGAGTCTTTTTAGGTCATCCTG..............................................................2840.25101000
................................TCGGCGCTTTGTAGCTTGATAGTAGCTG............................................................................................................2840.25101000
................................................................................................................CGTTGTTAGCTTCATTGAACACTTGA..............................2640.25101000
.........................AAATAATTCGGCGCTTTG.............................................................................................................................1840.25101000
...........................................................................................................................TCATTGAACACTTGAGGCGCCT.......................2240.25110000
.........................................................................CAGGGTAGTAACGAGTCTTTTTAGGG.....................................................................2640.25100010
...................................................................................................................TGTTAGCTTCATTGAACACTTGAGGCGCC........................2940.25101000
.............................................................................................................AGTCGTTGTTAGCTTCATTGAACACTT................................2740.25100010
...............................................................................................................TCGTTGTTAGCTTCATTGAACACTTGA..............................2740.25101000
..............................................................................TAGTAACGAGTCTTTTTAGG......................................................................2040.25100010
..........................................................................................................CTCAGTCGTTGTTAGCTTCATTGAACA...................................2740.25100010
.......................................................................TCCAGGGTAGTAACGAGTCTTTTTAGA......................................................................2740.25100010
................................................................................GTAACGAGTCTTTTTAGGTCA...................................................................2140.25100010
......................................................................................................................TAGCTTCATTGAACACTTGAGGCGCCT.......................2740.25101000
...................................................................................................................TGTTAGCTTCATTGAACACTTGAGC............................2540.25100010
..........GTAAAAGTCACCCATAAATAATTCGGCG..................................................................................................................................2840.25101000
........TTGTAAAAGTCACCCATAAATAATTCGG....................................................................................................................................2840.25101000
........................................................................CCAGGGTAGTAACGAGTCTTTTTAGGTC....................................................................2840.25101000
............................................................................................................CAGTCGTTGTTAGCTTCATTGAACAC..................................2640.25101000
...............................................................................................................TCGTTGTTAGCTTCATTGAACACTTGAGG............................2940.25101000
...............................................................................AGTAACGAGTCTTTTTAGGTCATCC................................................................2540.25101000
.................................................................................................................GTTGTTAGCTTCATTGAACACT.................................2240.25101000
..............................................................TATGCCGGTTCCAGGGTAGTAACGA.................................................................................2550.20101000
..................................................................................AACGAGTCTTTTTAGGTCATCCCACTC...........................................................2750.20101000
.............................................GCTTGATAGTAGCTGTGTATGCCGG..................................................................................................2550.20100010
.......................................................................TCCAGGGTAGTAACGAGT...............................................................................1850.20100010
..................................................................CCGGTTCCAGGGTAGTAACGAGT...............................................................................2350.20101000
................................................TGATAGTAGCTGTGTATGCCGGTTCTT.............................................................................................2750.20101000
.......................................................................TCCAGGGTAGTAACGAGTCTTTTTA........................................................................2550.20101000
.................................................................................TAACGAGTCTTTTTAGGTCATCCCACTA...........................................................2850.20101000
.......................................................................TCCAGGGTAGTAACGAGTCTTTTT.........................................................................2450.20101000
.................................................................................TAACGAGTCTTTTTAGGTCATCCC...............................................................2450.20100010
.........................................TGTAGCTTGATAGTAGCTGTGTATGCCGG..................................................................................................2950.20101000
................................................TGATAGTAGCTGTGTATGCCGGTTCCA.............................................................................................2750.20101000
.............................................................................................................AGTCGTTGTTAGCTTCATTGAACA...................................2450.20101000
........................................TTGTAGCTTGATAGTAGCTGTGTATGCC....................................................................................................2850.20101000
...........................................TAGCTTGATAGTAGCTGTGTATGCCGT..................................................................................................2750.20101000
...............................................TTGATAGTAGCTGTGTATGCCGG..................................................................................................2350.20101000
......................................................................TTCCAGGGTAGTAACGAGTCTTT...........................................................................2350.20101000
..................................................................................AACGAGTCTTTTTAGGTCATCC................................................................2250.20100010
................................................TGATAGTAGCTGTGTATGCCGGTTCCAG............................................................................................2850.20100010
.........................................................................................................ACTCAGTCGTTGTTAGCTTCATTGA......................................2550.20100010
...................................GCGCTTTGTAGCTTGATAGTAGCTG............................................................................................................2550.20101000
.................................................................................TAACGAGTCTTTTTAGGTCATCCCACTCA..........................................................2950.20101000
..................................................ATAGTAGCTGTGTATGCCGGTTCC..............................................................................................2450.20100010
.......................................................................TCCAGGGTAGTAACGAGTC..............................................................................1950.20101000
............................................................TGTATGCCGGTTCCAGGGTAGTAACGA.................................................................................2750.20101000
............................................AGCTTGATAGTAGCTGTGTATGCC....................................................................................................2450.20101000
...................................................................................................................TGTTAGCTTCATTGAACA...................................1850.20101000
................................................................TGCCGGTTCCAGGGTAGTAACGAG................................................................................2450.20100010
.......................................................................TCCAGGGTAGTAACGAGTCT.............................................................................2050.20100010
.................TCACCCATAAATAATTCG.....................................................................................................................................1850.20101000
...............................................TTGATAGTAGCTGTGTATGCC....................................................................................................2150.20101000
.................................................................GCCGGTTCCAGGGTAGTAACGAGTCTT............................................................................2750.20101000
.........................................TGTAGCTTGATAGTAGCTGTGTATGCT....................................................................................................2760.17100010
....................................................................................................ATCCCACTCAGTCGTTGTTAGCTT............................................2460.17100010
...........................................TAGCTTGATAGTAGCTGTGTATG......................................................................................................2360.17101000
.........................................................................................CTTTTTAGGTCATCCCACTCAGTCGT.....................................................2660.17100010
........................................................................................................CACTCAGTCGTTGTTAGCTTCAT.........................................2360.17101000
...................................................TAGTAGCTGTGTATGCCGGTTCCAGT...........................................................................................2660.17100010
..........................................GTAGCTTGATAGTAGCTGTGTATG......................................................................................................2460.17101000
...................................................TAGTAGCTGTGTATGCCGGTTCCAGA...........................................................................................2660.17101000
.........................................TGTAGCTTGATAGTAGCTGTGTATTG.....................................................................................................2660.17100010
..........................................................TGTGTATGCCGGTTCCAGGGTAGT......................................................................................2460.17101000
............................................................................................TTTAGGTCATCCCACTCAGTCGTTGTTAG...............................................2960.17101000
.......................................................................................................CCACTCAGTCGTTGTTAGCTTCAT.........................................2460.17100010
.....................................................................................GAGTCTTTTTAGGTCATCCCAC.............................................................2260.17101000
.............................................................................................TTAGGTCATCCCACTCAGTCGTTGTTAG...............................................2860.17101000
....................................................................................................ATCCCACTCAGTCGTTGTTAGCTTCATT........................................2860.17101000
....................................................AGTAGCTGTGTATGCCGGTTCCAGT...........................................................................................2560.17101000
.............................................................................................TTAGGTCATCCCACTCAGTCG......................................................2160.17100010
........................................TTGTAGCTTGATAGTAGCTGTGTA........................................................................................................2460.17101000
.............................................................................................TTAGGTCATCCCACTCAGTCGTTGTTAGT..............................................2960.17101000
...........................................TAGCTTGATAGTAGCTGTGTATGCTAT..................................................................................................2760.17100010
............................................................................................TTTAGGTCATCCCACTCAGTCGTTGTTT................................................2860.17110000
................................................TGATAGTAGCTGTGTATGCCGGTT................................................................................................2460.17100010
..........................................................................................TTTTTAGGTCATCCCACTCAGTCGTTGT..................................................2860.17101000
..................................................ATAGTAGCTGTGTATGCCGGTT................................................................................................2260.17101000
....................................................................................................ATCCCACTCAGTCGTTGTTAGCTTC...........................................2560.17101000
.............................................................................................TTAGGTCATCCCACTCAGTCGTTC...................................................2460.17101000
......................................................TAGCTGTGTATGCCGGTTCCAG............................................................................................2260.17100010
..........................................................................................TTTTTAGGTCATCCCACTCAGTCGTTAG..................................................2860.17100010
....................................................AGTAGCTGTGTATGCCGGTTCC..............................................................................................2260.17101000
............................................................................................TTTAGGTCATCCCACTCAGTCGT.....................................................2360.17101000
...................................................TAGTAGCTGTGTATGCCGGTTCCA.............................................................................................2460.17101000
..........................................................TGTGTATGCCGGTTCCAGGGTA........................................................................................2260.17101000
..........................................................................................TTTTTAGGTCATCCCACTCAGTCG......................................................2460.17100010
........................................................................................................CACTCAGTCGTTGTTAGCTTCA..........................................2260.17100010
......................................................TAGCTGTGTATGCCGGTTCCAGGGTG........................................................................................2660.17100100
.....................................GCTTTGTAGCTTGATAGTAGCTGTGTA........................................................................................................2760.17101000
.....................................................................................................TCCCACTCAGTCGTTGTTAGCTT............................................2360.17101000
..............................................................................................TAGGTCATCCCACTCAGTCGTTGTTAGCT.............................................2960.17101000
..............................................CTTGATAGTAGCTGTGTATG......................................................................................................2060.17100010
..............................................................................................TAGGTCATCCCACTCAGTCGTTGTT.................................................2560.17101000
.............................................................................................TTAGGTCATCCCACTCAGTCGTTGTT.................................................2660.17101000
...........................................................GTGTATGCCGGTTCCAGGG..........................................................................................1960.17101000
....................................................AGTAGCTGTGTATGCCGGTTCCAGGG..........................................................................................2660.17101000
...........................................................................................TTTTAGGTCATCCCACTCAGTCGTTGTT.................................................2860.17101000
dp5
AGAAAAGCTTGTAGAAGTC-CCAAAAAAAAGTTGTTCGCTTTGCAACTTTTTGGTGGCTCCAGAAATCGGCTCCAGCACATACAGCAGCACTTTGATGTTGGCCCATTGCTTTTCTGTTAGCAGCAAGTTTTGAGGCAAGTGTTGCCGGATGAACTCCTC-------GSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
AGAAAAGCTTGTAGAAGTCCCCAAAA-AAAGTTGTTCGCTTTGTAACTTTTTGGTGGCTCCAGAAATCGGCTCCAGCACAGACAGCAGCACTTTGATATCAGTCCATTGCTTTTCTGGTAGCTGCAAGTTTTGAGGCAAGTGTTGCTGGATGAACTCCTC-------GSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................TTCGCTTTGTAACTTTTTGGTGGCTC............................................................................................................2615.005050000
..................................TTCGCTTTGTAACTTTTTGGTGGCT.............................................................................................................2514.004040000
.............................................................................................TGATATCAGTCCATTGCTTTTCTGG..................................................2514.004040000
..................................TTCGCTTTGTAACTTTTTGGTGGC..............................................................................................................2414.004040000
..........................................................................................................................TGCAAGTTTTGAGGCAAGTGTTGC......................2412.002020000
................................TGTTCGCTTTGTAACTTTTTGGTGGC..............................................................................................................2612.002020000
..................................TTCGCTTTGTAACTTTTTGGTGGCTCC...........................................................................................................2712.002020000
...........................................................................................TTTGATATCAGTCCATTGCTTTTCTGG..................................................2712.002020000
................................................................AATCGGCTCCAGCACAGACAGCAGCAC.............................................................................2711.001010000
.................................................................................................................TCTGGTAGCTGCAAGTTTTGAGG................................2311.001010000
..................................TTCGCTTTGTAACTTTTTGGTG................................................................................................................2211.001010000
................................TGTTCGCTTTGTAACTTTTTGGT.................................................................................................................2311.001010000
.................................................................................................................TCTGGTAGCTGCAAGTTTTGAGGCAAG............................2711.001010000
..............................................................................................................................AGTTTTGAGGCAAGTGTTGCTGGA..................2411.001010000
..........................................................................................................................TGCAAGTTTTGAGGCAAGTG..........................2011.001010000
.........................................TGTAACTTTTTGGTGGCTCCAGAAA......................................................................................................2511.001010000
..............................................................................................................................AGTTTTGAGGCAAGTGTTGCT.....................2111.001010000
......................................................................CTCCAGCACAGACAGCAGCAC.............................................................................2111.001010000
............................................................................................................................CAAGTTTTGAGGCAAGTGTTGCTG....................2411.001010000
.......................................................................TCCAGCACAGACAGCAGCACTTTGATA......................................................................2711.001010000
..............................................................................................................................AGTTTTGAGGCAAGTGTTGCTGGAT.................2511.001010000
........................................TTGTAACTTTTTGGTGGCTCCAGAAA......................................................................................................2611.001010000
..............................................................................................................................AGTTTTGAGGCAAGTGTTGCTGG...................2311.001010000
............................................................................................................................CAAGTTTTGAGGCAAGTGTTGCTA....................2411.001010000
...................................................................................................................................TGAGGCAAGTGTTGCTGGATGAACTA...........2611.001010000
.........................................................................................................................................AAGTGTTGCTGGATGAACTC...........2011.001010000
............................AAGTTGTTCGCTTTGTAACTTTTTGG..................................................................................................................2611.001010000
.................................GTTCGCTTTGTAACTTTTTGGTGGCTC............................................................................................................2711.001010000
............................................................................CACAGACAGCAGCACTTTGATATCAG..................................................................2611.001001000
..................................TTCGCTTTGTAACTTTTTGGTGG...............................................................................................................2311.001010000
...........................................................CCAGAAATCGGCTCCAGCACAGACA....................................................................................2511.001010000
.................................................................................................ATCAGTCCATTGCTTTTCTGG..................................................2111.001001000
.....AGCTTGTAGAAGTCCCCAAAA-AAAGT........................................................................................................................................2620.501010000
droBip1
ACAAAAGCTTGAAAAAGTCTCCAAAA-------GTTCGCTCTGCAATTTTTTGGTAGCCACGGATATCGGCTCCAGCACAGAGAGCATTGCTTTGATGTCAGTCTATTGCTGCTCCGTTAGATGCCGAATTGGTGGCAAATGTTGGTGTATGAATTCCTC-------GSizeHit CountTotal NormTotal
No Reads
droKik1
ACAAAAGCTTGAAAAAGTCGCCAAAATAAAGCTGTTCGCTATGCAATTTTTTGGTAGCCACGGATATCGGCTCCAGCACAGACAGCAGTGCTTTGATGTCAGTCCATTGCTGGTCCGTTAGTTGGCAAATTGGTGGCAAGAGTTGGTGTATGAATTCCTC-------ASizeHit CountTotal NormTotal
No Reads
droFic1
ACAAAAGCTTGAAAAAGTCGCCAAAATAAAGCTGTTCGCTCTGAAATTTTTTGGTAGCCACGGATACCGGCTCCAGCACAGACAGCAGTGCTTTGATTTCAGTCCATTGCTGCTCCGTTAGTTGGCGAATTGGTGGCAAGTGTTGGTGTATAAATTCCTC-------GSizeHit CountTotal NormTotal
No Reads
droEle1
GCAAAATTTTGTAAAAATCTCCGAGACACATTTGCTCGTTTTGGAGCTTCTGAGTAGCATCAAAAATGGGATGAAGTGTCCCTACCAAGAATTTGGTGTCTGCCCACTGCAAATTGGACTACTGCGTGGTTTTAGGCAGGTGCT------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
GCCAAAGCTTGTAAAAGTCACCAAAATGTAGTTGTTCGCTTTGTAATTTTTGGGTTGCTTTGAAAATTGGCTCTAGTACAGTTAGAAGCAGTTCTATGTCCGTCCATTGGGAGATCGATAACTTCATATTCTCTTTGAGGTGGTCCTCGGTAAACTTTTT-------ASizeHit CountTotal NormTotal
No Reads
droEug1
ACAAAAGCTT--AAAAGTCGCCAAAATAAAGCTGTTCGCTCTGCAATTTTTTGGTAGCCACGGATATCGGCTCCAGCACAGACAGCAGTGCTTTGATGTCAGTCCATTGCTGCTCCGTTAGTTGGCGAATTGGTGGCAAGTGTTGGTGTATGAATTCCTC-------GSizeHit CountTotal NormTotal
No Reads

Generated: 05/15/2015 at 02:56 PM