ID:

dmo_2345

 Coordinate:

scaffold_6680:4537866-4538043 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-31.0 -31.0 -31.0

Flybase annnotation

CDS [Dmoj\GI12908-cds]; CDS [Dmoj\GI12908-cds]; exon [dmoj_GLEANR_12876:13]; exon [dmoj_GLEANR_12876:14]; intron [Dmoj\GI12908-in]

No Repeatable elements found

Sense Strand Reads

##################################################----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AGAGCGACACGGAATATGCCTATGGCACGCTCAACAGGAGCCAGAACAATGTATGAACAGGTTTCCATTTCCGACTTGAACTTAGATTTTAGACTTTAGACTGCACCAATGAATTGGCATTGTTGAGACTCTCACCTGGTGTCGGTGTAGTTGTTGTAGTTGTAACTGAATCTAACCCTAATCTCTCTAACCAACCAAATGTCTCTTTCTCTTGCTAACCCTTAACAGACTCTGGGTCGTGGAGGAGGTGCTTACTATGGCTCGCAGTCGGGCGATCT
**************************************************.......((((((.........))))))...((((((((.((..((..(((((((.((((..((((((((((.((((...))))..))))))))))...)))).)))))))..)))))))))))).....................................................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body		 V056
head
 V049
head
................................AACAGGAGCCAGAACAAT.................................................................................................................................................................................................................................... 18 0 1 3.00 3 1 1 0 1 0
.......................................................................................................................................................................................................................................CTGGGTCGTGGAGGAGGTGCTTACT...................... 25 0 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................................................................................TACTCTGGGTCGTGGAGGAGGTGC........................... 24 1 1 1.00 1 0 0 1 0 0
...........................................................................................................................................................................................................................................................TTACTATGGCTCGCAGTCGGG...... 21 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................................................................................................................TATGGCTCGCAGTCGGGCGATC. 22 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................................................CTCTTTCTCTTGCTAACCCTTAACAG.................................................. 26 0 1 1.00 1 0 1 0 0 0
....................................................................................................................................................................................................................................................GAGGTGCTAACTATGGAT................ 18 2 1 1.00 1 1 0 0 0 0
AGAGCGACACGGAATATGCCT................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0
..................................................GTATGAACAGGTTTCCATTTCCGACTTG........................................................................................................................................................................................................ 28 0 1 1.00 1 1 0 0 0 0
....................................................................................................................................................AGTTGTTGTAGTTGTAACT............................................................................................................... 19 0 1 1.00 1 0 0 0 0 1
..............TGTGCCTATGGCACGCTCAACA.................................................................................................................................................................................................................................................. 22 1 1 1.00 1 0 1 0 0 0
...........................................................................................................................................................................................................................................GTCGTGGAGGAGGTGCTTACTATGGCT................ 27 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................................................................................ACAATACTCTGGGTCGTGGAGGAGGT............................. 26 3 1 1.00 1 1 0 0 0 0
..............................TCAACAGGAGCCAGAACAAT.................................................................................................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0
................................................................................................................................................................................................................CTCTTGCTAACCCTTAACA................................................... 19 0 1 1.00 1 0 1 0 0 0
.................................................................................................................................TCTCACCTGGTGTCGGTGTAGTTGTTG.......................................................................................................................... 27 0 1 1.00 1 0 0 1 0 0
....CGACACGGAATATGCCTATGGCACGCT....................................................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................GGTGTCGGTCTAGTTGGTTTA........................................................................................................................ 21 3 2 0.50 1 0 0 1 0 0
................................AACAGGAGCCAGAACAAC.................................................................................................................................................................................................................................... 18 1 3 0.33 1 0 1 0 0 0
...............................................................................................................................................................................................................................................TGGAGGATGTGCAGACTATGGC................. 22 3 3 0.33 1 0 0 0 1 0
.......................................................................................................................TTCCTGAGACTCTCACCTGT........................................................................................................................................... 20 3 5 0.20 1 0 0 0 0 1
....................................................................................................................................................................................................................................................GAGGTGCTAACTATGGATT............... 19 3 17 0.06 1 1 0 0 0 0

Anti-sense strand reads

TCTCGCTGTGCCTTATACGGATACCGTGCGAGTTGTCCTCGGTCTTGTTACATACTTGTCCAAAGGTAAAGGCTGAACTTGAATCTAAAATCTGAAATCTGACGTGGTTACTTAACCGTAACAACTCTGAGAGTGGACCACAGCCACATCAACAACATCAACATTGACTTAGATTGGGATTAGAGAGATTGGTTGGTTTACAGAGAAAGAGAACGATTGGGAATTGTCTGAGACCCAGCACCTCCTCCACGAATGATACCGAGCGTCAGCCCGCTAGA
**************************************************.......((((((.........))))))...((((((((.((..((..(((((((.((((..((((((((((.((((...))))..))))))))))...)))).)))))))..)))))))))))).....................................................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M060
embryo
 V041
embryo
...........................................................CCAAAGGTAAAGGCTGAACTTGAAT.................................................................................................................................................................................................. 25 0 1 1.00 1 1 0
.....................................................................................................................................................................................................TTACAGAGCTAGAGAACGAATG........................................................... 22 3 2 0.50 1 0 1
.............................................................................................................................................................................................................AAAAAGAAGGATTGGCAATT..................................................... 20 3 17 0.06 1 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6680:4537816-4538093 + dmo_2345 AGAGCGACACGGAATATGCCTATGGCACGCTCAACAGGAGCCAGAACAATGTATGAA--CAGGTT------T----------C-CATTTCC-------------------------GAC-TTGAACTTAGAT-TTT-------AG-----ACTT---TAGACTGCACC---AATG--------AATTGGCATTG-----------------TTGAGA-C-----------------------------------------------TCTCAC--CT-----GGTGTCGGT------------------G---------TAGTTGTTGTAGTT-GTA------ACTGAATCTAACC-CTAATCTCTCTAACCAACCAAATGTCTCTTTC----------T--CTTG---CTAACCCT-------TAACAGACTCTGGGTCGTGGAGG------AGGTGCTTACTATGGCTCGCAGTCGGGCGATCT
droVir3 scaffold_13049:6216252-6216528 + dvi_18614 AGAGCGACACGGAGTATGCCTACGGCACGCTCAACAGGAGCCAGAACAATGTATGAA--CAGGT-------TA--------TC-CTTTATC--------------------------TCTTAG-T--TTAAG-TTTAGAT--------------------TGTGCACC---AACG--------AATTGGCATTGATTTA--ACTGACGAAATT------------------------------------------------------CTCAC--CT-----GGTGTCGGTATCAATTTACTAGT------------------AGCTGTAGCT-GT-------AACTGCTCTAACC-CTAATCTGTCTAACCAACCCAATCTT--T--G----------TCTCTTG---CTAACCTT-------TAACAGACTCTGGGTCGTGGAGG---------CGCTTATTGTAGCTCG------GGTGATAT
droGri2 scaffold_15072:37178-37485 + AGAGCGACACCGAATACGCCTACAGCACACTCAATCGAAGCCAGAACAATGTATGAA--CAGGTT------T---------TC-TAG-------CTTAAGTTTAAACAATATTTATTAAGTTG-T--TA-------GTAT--TTG-----CTTT----TGACTGCACC---AACAAAAC---AAATTGGCATTGATTTAATACCGATGA----------------------------------------AA--------------TTCTCAC--TT-----GGTGTCGGT------------------G---------T---AGCTGTAGCT-GTAACT------GCTCCTAAC-CCTAATCTCTCTAACCAACCGATTCTCCGTTTC----------TCT-TTCTAA----TG-C-TAACCCTAACAGATTGTGGGTCGCGGCGC---------AGTCTACTACGGCTCCCAGTCGGGTGATTT
droWil2 scf2_1100000004762:5215219-5215545 + AGAGCGACACGGAATATGCGTATGGAAACCACAACAAGAGTCAGAACAATGTATGAAC-CATTTT---TCTTT-------CAA-AGATTTCTAGTTTAGG-----------------GC-----TTTAATATTTTTGTTT--GAAAATAGTTAT---CTGACTGCACC---AAC---------AATTGGCATTGAGATG--GATAGCAAATTTGGGGTCACCAGTT------GT--GTCACAGTAGTTTTAGTTATT--------TTCTAAC--CT-----GGTG----------------------------TAGGG------------TTTTT-------AGCTAATCTAACAAATAATCTGTCTAACCAACCAAATTTCTTT--A----------TCTCTTCTAA----CCCT-TAACCCTAACAGACTTTGGGTCGTAGCGG------------TTACTATGCGTCC------AGTGAGAT
dp5 XR_group3a:146587-146914 - dps_2886 AGAGTGACACGGAGTACGCCTACGGGACGCTCAACAAGAGCCAGAACAATGTATGACA-AATACT-----------------C-CATTACC----------------------TACAACCATG-T--TAGAC-TTTGTTT-TTAG-----TTGATTGATGACTGCACC---AGTGATTA---AGATTGGCATTGAGATT--GATGACGAAATTGAGG-CACCATTTATGTTTAT--T-----------------------------TCTAAT--TA-----------------------GTAGTCGGTGG-CGTGGG------------GCT-CTAATTGGTCGAAAATCTAACACGTAACCTATTTAACCAACCGTATTTCTCT----CTTTCTCTCTCTCCTCTAA----CCCG-TAACCCTAACAGACTCTGGGTCGCAGCGG------------CTACTATGCGTCT------GGGGAGAT
droPer2 scaffold_23:149948-150275 - AGAGTGACACGGAATACGCCTACGGGACGCTCAACAAGAGCCAGAACAATGTATGACA-AATGCT-----------------C-CATTACC----------------------TACAACCATG-T--TAGAC-TTTGTTT-TTAG-----TTGATTGATGACTGCACC---AGTGATTA---AGATTGGCATTGAGATT--GATGACGAAATTGAGG-CACCATTTATGTTTAT--T-----------------------------TCTAAT--TA-----------------------GTAGTCGGTGG-CGTGGG------------GCT-CTAATTGGTCGAAAATCTAACACGTAACCTATTTAACCAACCGTATTTCTCT----CTTTCTCTCTCTCCTCTAA----CCCG-TAACCCTAACAGACTCTGGGTCGCAGCGG------------CTACTATGCGTCT------GGGGAGAT
droAna3 scaffold_13337:8073754-8074091 - AGAGCGACACGGAGTACGCCTATGGAACGCTCAACAAGAGCCAGAACAATGTATGAAGACACCCC-CTGCTTT-------CCC-ACTTTTC-------------------------GACTTTG-TTTTAGAT-TTTGTTT--TAG-----TTTT---GTGAGCGCACCTTGAGCGAATG---AAATTGGCATTGCGATC--GATGGCAAAAACGAGG-CACCAATT------GTAGTTTA-AGTAGTTCCA--------------T--TAAC--TT-----GGTG------------------------GAAGTGGG------------GC--TT-------AGCCAGGCTAACACGTAACCAGTCTAACCAGAAGCATTTCTCT-TC--TCTCTTCCACTCTTCTAA----CCCG-TAACCCTAACAGACACTGGGTCGCAGCGG---------GGCTTACTACGGATCA--GCC-GGCGAGGT
droBip1 scf7180000396541:229801-230144 - AGAGCGACACGGAGTACGCCTATGGAACGCTCAACAAGAGCCAGAACAATGTATGAAGACACCCCCCTGCTTTTT-----CCC-AACTTTC-------------------------GACTTTG-TTTTAGAT-TTTGTTT--TAG-----TTTT---GTGAGCGCACTTTGAGCGAATG---AAATTGGCATTGAGATC--GATGGCAAAAACGAGG-CACCAATT-----TGTAGTCTA-AGTAGTTTAT--------------T--TAAC--TT-----GGTG------------------------GAAGTGGG------------GC--TT-------AGCCAGGCTAACACGTAACCAGTCTAACCAGGAGCATTTCTCT-TCTCTCTCTTCCTCTCTTCTAA----CCCG-TAACCCTAACAGACACTGGGTCGCAGCGG---------GGCTTACTATGGATCC--A-CGGGCGAGGT
droKik1 scf7180000302474:424959-425273 - AAAGCGATACAGAGATTGCCTATGGAACGCTCAACAGGAGCCAGAACAATGTATGAGA-ATCCTT------TT-AAGCTC-TC-CTTTCAT--------------------------TTTTAG-T--TAGAT-TTT---------------------------GCACC---AGCGAATG---AAATTGGCACTGAGATC--GAAGGCTAAATTGAGG-CACCAATT-----TCT--TTCC-AGTAGAGTAA----TTCGGAGGGATCCTAAC--CT-----GGTG----------------------------TGGGGT-----------------------TGGCCATCTAACACGTAACCAGTCTAACC-------TCTCTTC-TC----TC--TCTCTCTCCTAA----CCCCGTAACCATAACAGACTTTGGGTCGCAGCGGAGGAGGAGGCGCTTACTACGGTGCC------GGGGAAGT
droFic1 scf7180000453833:744309-744626 + AGAGCGACACGGAGTACGCCTACGGAACACTCAACAAGAGCCAAAACAATGTATGAGT-CACCTC------CT--------TG-CCTTTCC-------------------------CATCTTG-T--TAGAA-TTTGTATTTTAG-----TTTT---GTGAATGCACC---GACGAAAG---AAATTGGCATTGAGATC--GATGACAAAATTTAGG-CACCATTT-----TGT--TTTCAAGTAGTCTAA--------------TTCTAAC--TTGGTTTGGTG----------------------------TGGG------------TC--CT-------AGCCAATCTAACACGTAACCAGTCTAACCAGCAGTATCTCTTT-TC----------TCTCTCCTAA----CCCCGTAACGCTAACAGACTTTGGGTCGCAGCGG------------TTACTACGGTTCC------AGCGAGAT
droEle1 scf7180000491268:123778-124102 - AGAGTGAACCCGAGTACGCCTACGGAACGCTCAACAAGAGCCAGAACAATGTATGAGA-AACGTT------TT--------TT-CATTTAC-------------------------CAT-TTG-T--TAGAA-TTTGTAT-TTAG-----TTTG----CAAACGCACC---GGCGAAAG--AAAATTGGCATTGAGATC--GATGGCAAAATTGAGG-CACCATTTTTCTTTCC--TTCA-AGTAGTCTAA--------------TTCTAAT--TT-----GGTG----------------------------TGGGCT------TGGGGC--TT-------AGCCAATCTAACACGTAACCAGTCTAACCGGCAGTATCTCTCC-TC----TC-TTCTCTTCTCTAA----CCCC-TAACCCTAACAGACTTTGGGTCGCAGCGG------------TTACTACGGTTCC------AGCGAAAT
droRho1 scf7180000779204:208513-208797 + AGAGCGACACGGAGTACCCATATGGAACGCTCAACAAGAGCCAAAACAATGTATGAGA-CACG---------------------AATGTTC-------------------------CACTTTG-T--TATAA-TTTGTAT--TAG--------------CAACGCACC---AGCG----------TTGGCAATGAGATC--GATGGCAAAATTGAGG-CACCAGG--------------G-AGTAGCCTAA--------------TTCTAAT-TTT-----GGTG----------------------------TGGG------------TT--TT-------AGCCAATCTAACACATAACCAGTCTAACCGGCAGTATCTCTTTTTC----------TCTCCTCTAA----CCCC-TAACCCTAACAGACTTTGGGTCGCAGCGG------------GTACTACGGTTCC------GGCGAAAT
droBia1 scf7180000302428:10499985-10500277 + AGAGTGACACGGAGTACGCCTAC------------AAGAGCCAGGACAATGTATGAAA-CA-GTT------TA--------TC-CATTTTC-------------------------CATATTG-T--TAAAT-TTTGTAC--TAG-----TTTT----TGAGAGCACC---AGCTAAGA---ATATTGGCATTGAGAT---GATGGCCAAATTGAGG-CACCATTT-----TCT--TTCT-CATAGTCTAA--------------TTCCAAT--TT-----GGTT----------------------------TCGGGT-----------------------AGCCAGTCTAACACATAACCAGTCTAACCGGCCGTATTTCTTTTTC----------TCTTCTCTAA----CCCC-TAACCCTAACAGACTTTGGGTCGCAGCGG------------TTACTACGGTTCC------GGCGAGCT
droTak1 scf7180000414445:149039-149336 - AGAGTGACACGGAGTACGCCTAC------------AGGAGCCAGGACAATGTATGAAA-CA-GCT------TC--------TC-TATTTTC-------------------------CACATTG-T--TATAT-TTTGTAT--AAG-----TTCT----TGAAAGCACC---ACCGAAACAAAAAATTGGCATTGAGATT--GATGGCGAAATTGAGG-CACCATTT-----TGT--TTCA-AGTAGTCTAA--------------TTCTAAT--TT-----GGTG----------------------------TGGG-T-----------------------AGACCATCTAACACGTAACCAGTCTAACCGGCAGTATTTCTTCTTC--------TCTCTCTTCTAA----CCCC-TAACCCTAACAGACTTTGGGTCGCAGCGG------------TTACTACGGTTCC------GGAGAGAT
droEug1 scf7180000409524:95520-95811 - AGAGTGACACCGAATACGCCTAC------------AAGAGCCAGAACAATGTATGAAA-TA--TT------TA--------TCTATTTTTC-------------------------CACTTTG-T--TCAAA-TTTATAT--TAG-----TTTT----TGAGAGCACC---AACAAAAG---AAATTGGCATTGAGATC--GATGACGAAATTTAGG-CACCAATT-----TGT--TTTA-AGTAGTCTAA--------------TTCTAAC--TT-----GGTT----------------------------TCGG-A-----------------------TGCCAGTCTAACACGTAACCAGTCTAACCAGCAGTATTTCTTT-TC----------TCTCTTCTAA----CCCC-TAACCATAACAGACTTTGGGTCGCAGTGG------------TTATTACGGTTCC------AGCGAGAT
dm3 chr3L:8565740-8566035 + AAAGTGACACCGAGTACGCCTAT------------AGAAGCCAGAACAATGTATGAAA-CATGTT------TA--------TC-ACTTTTC-------------------------CACATTG-T--TATAT-TTTGTAT--TAG-----TCTT----TGAAAGCACC---AGCAAAAG---AAATTGGCATTGAGATG--AATTGCTAAATTGAAG-CACCAATT-----TGT--TTAA-AGTAGTCTAG--------------TTCTAATATCT-----GGTG----------------------------TGGGGT-----------------------AGCAAATCTAACACGTAACCGATCTAACCAGCAGTATTTCTTT-TC----------TCTCCTCTAA----CCTC-TAATCATAACAGACTTTGGGTCGCAGCGG------------TTACTATGGTTCC------AGCGAAAT
droSim2 3l:8355479-8355773 + dsi_7774 AAAGTGACACCGAGTACGCCTAT------------AGAAGCCAGAACAATGTATGAAA-CACGTT------TA--------TT-ACTTTTC-------------------------CACATTG-T--TATAT-TTTGTAT--TAG-----TCTT----TGAAAGCACC---AGCAAATG---AAATTGGCATTGAGATG--AATGGCAAAATTGAAG-CACCAATT-----TGT--TTCA-AGTAGTCTAG--------------CTATAATATCT-----GGTC----------------------------TGGG-T-----------------------AGCAAATCTAACACGTAACCGATCTAACCGGCAGTATTTCTTT-TC----------TCTCTTCTAA----CCTC-TAACCATAACAGACTTTGGGTCGCAGCGG------------TTACTACGGTTCC------AGCGAAAT
droSec2 scaffold_0:844992-845286 + AAAGTGACACCGAGTACGCCTAT------------AGAAGCCAGAACAATGTATGAAA-CACGTT------TA--------TC-ACTTTTC-------------------------CACATTG-T--TATAT-TTTGTAT--TAG-----TCTT----TGAGAGCACG---AGCAAATG---AAATTGGCATTGAGATG--AATGGCAAAATTGAAG-CACCAATT-----TGT--TTCA-AGTAGTCTAG--------------CTATAATATCT-----GGTG----------------------------TGGG-T-----------------------AGCAAATCTAACACGTAACCGATCTAACCGGCAATATTTCTTT-TC----------TCTCTTCTAA----CCTC-TAACCATAACAGACATTGGGTCGCAGCGG------------TTACTACGGATCC------AGCGAAAT
droYak3 3L:3347638-3347930 - AAAGTGACACCGAGTACGCCTAT------------AGAAGCCAGAACAATGTATGAAA-CACGTT------TA--------TC-TTTTCTC-------------------------CACATTG-T--TATAT-TTTGTAT--TAG-----TCTT----TGAAAGCACG---AGCAAATG---AAATTGGCATTGAGATA--GATGGCTAAATTGAGG-CACCAGTT-----TGT--TTCA-AGTAGTCTAA--------------TTATAAT--TT-----GGTG----------------------------TGGG-C-----------------------AGTCAATCTAACACTTAACCAATCTAACCGGCAGTATTTCTTT-TC----------TCTCTTCTAA----CCTC-TAACCATAACAGACTTTGGGTCGCAGCGG------------TTACTACGGTTCC------AGCGAGCT
droEre2 scaffold_4784:5481448-5481737 - AAAGTGACACCGAGTACGCCAAT------------AGAAGCCAGAACAATGTATGAAA-CACGTT------TA--------CC-TTTTTTC-------------------------CACATTG-T--TATAT-TTTGTAT--TAG-----TCTT----TGAAAGCACG---AACAAAAG--AAAATTGGCATTGAGA------TGGCTAAATTGAAG-CACCATTT-----TGA--TTCA-AGTAGTCTAG--------------TTCTAAT--TT-----GGTG----------------------------TGGG-T-----------------------AGCCAATCTAACAAGTAACCAATCTAACCGGCAGTATTTCTTT-TC----------TCTCTTCTAA----CCTC-TAACCATAACAGACTTTGGGTCGCAGCGG------------TTACTACGGTTCC------AGCGAGAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
AGAGCGACACGGAATATGCCTATGGCACGCTCAACAGGAGCCAGAACAATGTATGAA--CAGGTT------T----------C-CATTTCC-------------------------GAC-TTGAACTTAGAT-TTT-------AG-----ACTT---TAGACTGCACC---AATG--------AATTGGCATTG-----------------TTGAGA-C-----------------------------------------------TCTCAC--CT-----GGTGTCGGT------------------G---------TAGTTGTTGTAGTT-GTA------ACTGAATCTAACC-CTAATCTCTCTAACCAACCAAATGTCTCTTTC----------T--CTTG---CTAACCCT-------TAACAGACTCTGGGTCGTGGAGG------AGGTGCTTACTATGGCTCGCAGTCGGGCGATCTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................................AACAGGAGCCAGAACAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.003100110
................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGGTCGTGGAGG------AGGTGCTTACT......................2511.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACTATGGCTCGCAGTCGGG......2111.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGCTCGCAGTCGGGCGATC.2211.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................CTCTTTC----------T--CTTG---CTAACCCT-------TAACAG........................................................2611.001000010
AGAGCGACACGGAATATGCCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
..................................................GTATGAA--CAGGTT------T----------C-CATTTCC-------------------------GAC-TTG..........................................................................................................................................................................................................................................................................................................................................................................2811.001100000
...............................................................................................................................................................................................................................................................................................................................AGTTGTTGTAGTT-GTA------ACT............................................................................................................................................1911.001001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGTGGAGG------AGGTGCTTACTATGGCT................2711.001100000
..............................TCAACAGGAGCCAGAACAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
...................................................................................................................................................................................................................................................................................................................................................................................................C----------T--CTTG---CTAACCCT-------TAACA.........................................................1911.001000010
..........................................................................................................................................................................................................................................................................TCTCAC--CT-----GGTGTCGGT------------------G---------TAGTTGTTG..............................................................................................................................................................2711.001000001
....CGACACGGAATATGCCTATGGCACGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
................................AACAGGAGCCAGAACAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................1830.331000010
droVir3
AGAGCGACACGGAGTATGCCTACGGCACGCTCAACAGGAGCCAGAACAATGTATGAA--CAGGT-------TA--------TC-CTTTATC--------------------------TCTTAG-T--TTAAG-TTTAGAT--------------------TGTGCACC---AACG--------AATTGGCATTGATTTA--ACTGACGAAATT------------------------------------------------------CTCAC--CT-----GGTGTCGGTATCAATTTACTAGT------------------AGCTGTAGCT-GT-------AACTGCTCTAACC-CTAATCTGTCTAACCAACCCAATCTT--T--G----------TCTCTTG---CTAACCTT-------TAACAGACTCTGGGTCGTGGAGG---------CGCTTATTGTAGCTCG------GGTGATATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................CTACGGCACGCTCAACAGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................ATCAATTTACTAGT------------------AGCTGTAG...........................................................................................................................................................2211.001010000000000000000000000000000000000000000000000000000000000000
........ACGGAGTATGCCTACGGCACGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000001000000000000000000000000000000000
.................................ACAGGAGCCAGAACAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.001000000000000000000000000000000000000000000000000000000000010000
................................AACAGGAGCCAGAACAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001010000000000000000000000000000000000000000000000000000000000000
...................CTACGGCACGCTCAACAGGAGCCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000001000
.........................................................................................................................................................................................................................................................................................................TACTAGT------------------AGCTGTAGCT-GT-------...............................................................................................................................................1911.001000000000000000000000001000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGGAGG---------CGCTTATTGTAGCTC...............2311.001000000000000010000000000000000000000000000000000000000000000000
AGAGCGACACGGAGTATGCCTAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000010000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTATTGTAGCTCG------GGTGAT..2111.001001000000000000000000000000000000000000000000000000000000000000
.............GTATGCCTACGGCACGCTCAACAGGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................ATTTA--ACTGACGAAATT------------------------------------------------------CTCAC--CT-----GGTGTCG.....................................................................................................................................................................................................3111.001000000000000000000000000000000000000000000000000000100000000000
............................................................................................................................................................................................................................................................................................................TAGT------------------AGCTGTAGCT-GT-------AACTGCT........................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000010000
.......................................................................................................................................................................................................................................................................................................................................................................ATCTGTCTAACCAACCCAATC.........................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000001
..................................................................................................................................................................................................................................................................................................ATCAATTTACTAGT------------------AGCTGTAA...........................................................................................................................................................2211.001010000000000000000000000000000000000000000000000000000000000000
..................................................GTATGAA--CAGGT-------TA--------TC-CTTTAT...........................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
..............................TCAACAGGAGCCAGAACAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTTATTGTAGCTCG------GGC.....1911.001000000000000000000000000000001000000000000000000000000000000000
...............................CAACAGGAGCCAGAACAATACT................................................................................................................................................................................................................................................................................................................................................................................................................................................2230.672101000000000000000000000000000000000000000000000000000000000000
.................................ACAGGAGCCAGAACAATACT................................................................................................................................................................................................................................................................................................................................................................................................................................................20150.071000000000000000000000000000000100000000000000000000000000000000
...............................CAACAGGAGCCAGAACAATACC................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051100000000000000000000000000000000000000000000000000000000000000
droGri2
AGAGCGACACCGAATACGCCTACAGCACACTCAATCGAAGCCAGAACAATGTATGAA--CAGGTT------T---------TC-TAG-------CTTAAGTTTAAACAATATTTATTAAGTTG-T--TA-------GTAT--TTG-----CTTT----TGACTGCACC---AACAAAAC---AAATTGGCATTGATTTAATACCGATGA----------------------------------------AA--------------TTCTCAC--TT-----GGTGTCGGT------------------G---------T---AGCTGTAGCT-GTAACT------GCTCCTAAC-CCTAATCTCTCTAACCAACCGATTCTCCGTTTC----------TCT-TTCTAA----TG-C-TAACCCTAACAGATTGTGGGTCGCGGCGC---------AGTCTACTACGGCTCCCAGTCGGGTGATTTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.....GACACCGAATACGCCTACAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110
....................TACAGCACACTCAATCGAAGCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00110
droWil2
AGAGCGACACGGAATATGCGTATGGAAACCACAACAAGAGTCAGAACAATGTATGAAC-CATTTT---TCTTT-------CAA-AGATTTCTAGTTTAGG-----------------GC-----TTTAATATTTTTGTTT--GAAAATAGTTAT---CTGACTGCACC---AAC---------AATTGGCATTGAGATG--GATAGCAAATTTGGGGTCACCAGTT------GT--GTCACAGTAGTTTTAGTTATT--------TTCTAAC--CT-----GGTG----------------------------TAGGG------------TTTTT-------AGCTAATCTAACAAATAATCTGTCTAACCAACCAAATTTCTTT--A----------TCTCTTCTAA----CCCT-TAACCCTAACAGACTTTGGGTCGTAGCGG------------TTACTATGCGTCC------AGTGAGATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................................AACAAGAGTCAGAACAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00200020
...............................................................................................................................................................................................................................................................................................................................................................................................................CTCTTCTAA----CCCT-TAACCCTAACAG........................................................2511.00110000
.....GACACGGAATATGCGTATGGAAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTGGGTCGTAGCGG------------TTACTA.....................2311.00110000
AGAGCGACACGGAATATGCGTATGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
.............................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTGGGTCGTAGCGG------------TTACTC.....................2311.00110000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTCGTAGCGG------------TTACTATGC..................2011.00100100
dp5
AGAGTGACACGGAGTACGCCTACGGGACGCTCAACAAGAGCCAGAACAATGTATGACA-AATACT-----------------C-CATTACC----------------------TACAACCATG-T--TAGAC-TTTGTTT-TTAG-----TTGATTGATGACTGCACC---AGTGATTA---AGATTGGCATTGAGATT--GATGACGAAATTGAGG-CACCATTTATGTTTAT--T-----------------------------TCTAAT--TA-----------------------GTAGTCGGTGG-CGTGGG------------GCT-CTAATTGGTCGAAAATCTAACACGTAACCTATTTAACCAACCGTATTTCTCT----CTTTCTCTCTCTCCTCTAA----CCCG-TAACCCTAACAGACTCTGGGTCGCAGCGG------------CTACTATGCGTCT------GGGGAGATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................AACAAGAGCCAGAACAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000100000
...GTGACACGGAGTACGCCTACGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
..............................................................................................................................................................................................ATTGAGATT--GATGACGAAATTGAGG-C..........................................................................................................................................................................................................................................................................2611.0010000000001
.......................GGGACGCTCAACAAGAGCCAGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
......ACACGGAGTACGCCTACGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
.....GACACGGAGTACGCCTACGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.............GTACGCCTACGGGACGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
.....GACACGGAGTACGCCTACGGGACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCGG------------CTACTATGCGTCT------........2011.0010010000000
...................CTACGGGACGCTCAACAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GG------------CTACTATGCGTCT------GGG.....1811.0010100000000
.......CACGGAGTACGCCTACGGGACGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
..................................................................................................................................................................TGCACC---AGTGATTA---AGATTGC........................................................................................................................................................................................................................................................................................................2120.5010100000000
droPer2
AGAGTGACACGGAATACGCCTACGGGACGCTCAACAAGAGCCAGAACAATGTATGACA-AATGCT-----------------C-CATTACC----------------------TACAACCATG-T--TAGAC-TTTGTTT-TTAG-----TTGATTGATGACTGCACC---AGTGATTA---AGATTGGCATTGAGATT--GATGACGAAATTGAGG-CACCATTTATGTTTAT--T-----------------------------TCTAAT--TA-----------------------GTAGTCGGTGG-CGTGGG------------GCT-CTAATTGGTCGAAAATCTAACACGTAACCTATTTAACCAACCGTATTTCTCT----CTTTCTCTCTCTCCTCTAA----CCCG-TAACCCTAACAGACTCTGGGTCGCAGCGG------------CTACTATGCGTCT------GGGGAGATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.....GACACGGAATACGCCTACGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002020000
.....GACACGGAATACGCCTACGGGACGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
............................................................................................................................................................................................................................................................................................................................................................................................TCTCT----CTTTCTCTCTCTCCT.................................................................................2030.331000010
...............................CAACAAGAGCCAGAACAATACT................................................................................................................................................................................................................................................................................................................................................................................................................................................2260.171100000
droAna3
AGAGCGACACGGAGTACGCCTATGGAACGCTCAACAAGAGCCAGAACAATGTATGAAGACACCCC-CTGCTTT-------CCC-ACTTTTC-------------------------GACTTTG-TTTTAGAT-TTTGTTT--TAG-----TTTT---GTGAGCGCACCTTGAGCGAATG---AAATTGGCATTGCGATC--GATGGCAAAAACGAGG-CACCAATT------GTAGTTTA-AGTAGTTCCA--------------T--TAAC--TT-----GGTG------------------------GAAGTGGG------------GC--TT-------AGCCAGGCTAACACGTAACCAGTCTAACCAGAAGCATTTCTCT-TC--TCTCTTCCACTCTTCTAA----CCCG-TAACCCTAACAGACACTGGGTCGCAGCGG---------GGCTTACTACGGATCA--GCC-GGCGAGGTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............AGTACGCCTATGGAACGCTCAACAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
.............GTACGCCTATGGAACGCTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
.GAGCGACACGGAGTACGCCTATGGAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000010
...................CTATGGAACGCTCAACAAGAGCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
.....GACACGGAGTACGCCTATG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................AGACACTGGGTCGCAGCGG---------GG............................2111.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAGCGG---------GGCTTACTACGG..................2011.001010000
........................................................................................................................................................TT---GTGAGCGCACCTTGAGC.......................................................................................................................................................................................................................................................................................................................1911.001010000
...................CTATGGAACGCTCAACAAGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
.........................................................................................................................................................................................................................................................CA--------------T--TAAC--TT-----GGTG------------------------GAAGT...........................................................................................................................................................................1811.001000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGTCGCAGCGG---------GGCTTACTAC....................2311.001100000
..........GGAGTACGCCTATGGAACGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000001
droBip1
AGAGCGACACGGAGTACGCCTATGGAACGCTCAACAAGAGCCAGAACAATGTATGAAGACACCCCCCTGCTTTTT-----CCC-AACTTTC-------------------------GACTTTG-TTTTAGAT-TTTGTTT--TAG-----TTTT---GTGAGCGCACTTTGAGCGAATG---AAATTGGCATTGAGATC--GATGGCAAAAACGAGG-CACCAATT-----TGTAGTCTA-AGTAGTTTAT--------------T--TAAC--TT-----GGTG------------------------GAAGTGGG------------GC--TT-------AGCCAGGCTAACACGTAACCAGTCTAACCAGGAGCATTTCTCT-TCTCTCTCTTCCTCTCTTCTAA----CCCG-TAACCCTAACAGACACTGGGTCGCAGCGG---------GGCTTACTATGGATCC--A-CGGGCGAGGTSizeHit CountTotal NormTotal
No Reads
droKik1
AAAGCGATACAGAGATTGCCTATGGAACGCTCAACAGGAGCCAGAACAATGTATGAGA-ATCCTT------TT-AAGCTC-TC-CTTTCAT--------------------------TTTTAG-T--TAGAT-TTT---------------------------GCACC---AGCGAATG---AAATTGGCACTGAGATC--GAAGGCTAAATTGAGG-CACCAATT-----TCT--TTCC-AGTAGAGTAA----TTCGGAGGGATCCTAAC--CT-----GGTG----------------------------TGGGGT-----------------------TGGCCATCTAACACGTAACCAGTCTAACC-------TCTCTTC-TC----TC--TCTCTCTCCTAA----CCCCGTAACCATAACAGACTTTGGGTCGCAGCGGAGGAGGAGGCGCTTACTACGGTGCC------GGGGAAGTSizeHit CountTotal NormTotal
No Reads
droFic1
AGAGCGACACGGAGTACGCCTACGGAACACTCAACAAGAGCCAAAACAATGTATGAGT-CACCTC------CT--------TG-CCTTTCC-------------------------CATCTTG-T--TAGAA-TTTGTATTTTAG-----TTTT---GTGAATGCACC---GACGAAAG---AAATTGGCATTGAGATC--GATGACAAAATTTAGG-CACCATTT-----TGT--TTTCAAGTAGTCTAA--------------TTCTAAC--TTGGTTTGGTG----------------------------TGGG------------TC--CT-------AGCCAATCTAACACGTAACCAGTCTAACCAGCAGTATCTCTTT-TC----------TCTCTCCTAA----CCCCGTAACGCTAACAGACTTTGGGTCGCAGCGG------------TTACTACGGTTCC------AGCGAGATSizeHit CountTotal NormTotal
No Reads
droEle1
AGAGTGAACCCGAGTACGCCTACGGAACGCTCAACAAGAGCCAGAACAATGTATGAGA-AACGTT------TT--------TT-CATTTAC-------------------------CAT-TTG-T--TAGAA-TTTGTAT-TTAG-----TTTG----CAAACGCACC---GGCGAAAG--AAAATTGGCATTGAGATC--GATGGCAAAATTGAGG-CACCATTTTTCTTTCC--TTCA-AGTAGTCTAA--------------TTCTAAT--TT-----GGTG----------------------------TGGGCT------TGGGGC--TT-------AGCCAATCTAACACGTAACCAGTCTAACCGGCAGTATCTCTCC-TC----TC-TTCTCTTCTCTAA----CCCC-TAACCCTAACAGACTTTGGGTCGCAGCGG------------TTACTACGGTTCC------AGCGAAATSizeHit CountTotal NormTotal
No Reads
droRho1
AGAGCGACACGGAGTACCCATATGGAACGCTCAACAAGAGCCAAAACAATGTATGAGA-CACG---------------------AATGTTC-------------------------CACTTTG-T--TATAA-TTTGTAT--TAG--------------CAACGCACC---AGCG----------TTGGCAATGAGATC--GATGGCAAAATTGAGG-CACCAGG--------------G-AGTAGCCTAA--------------TTCTAAT-TTT-----GGTG----------------------------TGGG------------TT--TT-------AGCCAATCTAACACATAACCAGTCTAACCGGCAGTATCTCTTTTTC----------TCTCCTCTAA----CCCC-TAACCCTAACAGACTTTGGGTCGCAGCGG------------GTACTACGGTTCC------GGCGAAATSizeHit CountTotal NormTotal
No Reads
droBia1
AGAGTGACACGGAGTACGCCTAC------------AAGAGCCAGGACAATGTATGAAA-CA-GTT------TA--------TC-CATTTTC-------------------------CATATTG-T--TAAAT-TTTGTAC--TAG-----TTTT----TGAGAGCACC---AGCTAAGA---ATATTGGCATTGAGAT---GATGGCCAAATTGAGG-CACCATTT-----TCT--TTCT-CATAGTCTAA--------------TTCCAAT--TT-----GGTT----------------------------TCGGGT-----------------------AGCCAGTCTAACACATAACCAGTCTAACCGGCCGTATTTCTTTTTC----------TCTTCTCTAA----CCCC-TAACCCTAACAGACTTTGGGTCGCAGCGG------------TTACTACGGTTCC------GGCGAGCTSizeHit CountTotal NormTotal
No Reads
droTak1
AGAGTGACACGGAGTACGCCTAC------------AGGAGCCAGGACAATGTATGAAA-CA-GCT------TC--------TC-TATTTTC-------------------------CACATTG-T--TATAT-TTTGTAT--AAG-----TTCT----TGAAAGCACC---ACCGAAACAAAAAATTGGCATTGAGATT--GATGGCGAAATTGAGG-CACCATTT-----TGT--TTCA-AGTAGTCTAA--------------TTCTAAT--TT-----GGTG----------------------------TGGG-T-----------------------AGACCATCTAACACGTAACCAGTCTAACCGGCAGTATTTCTTCTTC--------TCTCTCTTCTAA----CCCC-TAACCCTAACAGACTTTGGGTCGCAGCGG------------TTACTACGGTTCC------GGAGAGATSizeHit CountTotal NormTotal
No Reads
droEug1
AGAGTGACACCGAATACGCCTAC------------AAGAGCCAGAACAATGTATGAAA-TA--TT------TA--------TCTATTTTTC-------------------------CACTTTG-T--TCAAA-TTTATAT--TAG-----TTTT----TGAGAGCACC---AACAAAAG---AAATTGGCATTGAGATC--GATGACGAAATTTAGG-CACCAATT-----TGT--TTTA-AGTAGTCTAA--------------TTCTAAC--TT-----GGTT----------------------------TCGG-A-----------------------TGCCAGTCTAACACGTAACCAGTCTAACCAGCAGTATTTCTTT-TC----------TCTCTTCTAA----CCCC-TAACCATAACAGACTTTGGGTCGCAGTGG------------TTATTACGGTTCC------AGCGAGATSizeHit CountTotal NormTotal
No Reads
dm3
AAAGTGACACCGAGTACGCCTAT------------AGAAGCCAGAACAATGTATGAAA-CATGTT------TA--------TC-ACTTTTC-------------------------CACATTG-T--TATAT-TTTGTAT--TAG-----TCTT----TGAAAGCACC---AGCAAAAG---AAATTGGCATTGAGATG--AATTGCTAAATTGAAG-CACCAATT-----TGT--TTAA-AGTAGTCTAG--------------TTCTAATATCT-----GGTG----------------------------TGGGGT-----------------------AGCAAATCTAACACGTAACCGATCTAACCAGCAGTATTTCTTT-TC----------TCTCCTCTAA----CCTC-TAATCATAACAGACTTTGGGTCGCAGCGG------------TTACTATGGTTCC------AGCGAAATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................TAA----CCTC-TAATCATAACAGACT.....................................................2219.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCAGCGG------------TTACTATGGTTC...............2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000020000000000000000000000000010000000000000000
......ACACCGAGTACGCCTAT------------AGAAGCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................G------------TTACTATGGTTCC------AGCGAAA.2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TAT------------AGAAGCCAGAACAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGGTCGCAGCGG------------TTAC.......................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CACCGAGTACGCCTAT------------AGAAGCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGGTCGCAGCGG------------TTA........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGG------------TTACTATGGTTCC------AGC.....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................AGCCAGAACAATGTATGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TACGCCTAT------------AGAAGCCAGAAC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........ACCGAGTACGCCTAT------------AGAAGCCAGAACAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GACACCGAGTACGCCTAT------------AGAAGCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AAAGTGACACCGAGTACGCCTAT------------A.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................CACGTAACCGATCTAACCA.................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GAGTACGCCTAT------------AGAAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTGGGTCGCAGCGG------------TT.........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..............TACGCCTAT------------AGAAGCCAGAACAATACT................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........CGAGTACGCCTAT------------AGAAGCCAGAACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................AG--------------TTCTAATATCT-----GGTG----------------------------TGGGGT-----------------------AGCA...........................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..AGTGACACCGAGTACGCCTAT------------AGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................AGACTTTGGGTCGCAGCGG------------...........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
........................................................................................................................................................................................ATTGGCATTGAGATG--AATTGC......................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.......CACCGAGTACGCCTAT------------AGAAGCCAGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TGACACCGAGTACGCCTAT------------AGAAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AAGTGACACCGAGTACGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGG------------TTACTATGGTTCC------AGCG....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
AAAGTGACACCGAGTACGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................GCAAATCTAACACGTAACCGA.........................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGCAGCGG------------TTACTATGGT.................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GG------------TTACTATGGTTCC------AGC.....1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGG------------TTACTATGGTTCC------........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCGG------------TTACTATGGTTCC------........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................ACACGTAACCGATCTAACCAGC...............................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................ATAACAGACTTTGGGTCGCAGCGG------------T..........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGGTCGCAGCGG------------TTACTATGGTT................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GTACGCCTAT------------AGAAGCCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GG------------TTACTATGGTTCC------AGCGAAA.2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.............................................................................................................................................................................................................................CAATT-----TGT--TTAA-AGTAGT..............................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000
AAAGTGACACCGAGTACGCCTAT------------AGAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........ACCGAGTACGCCTAT------------AGAAGCCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
..........................................................................................................................................................................................................................................................................................GTG----------------------------TGGGGT-----------------------AGCAAATCTAA....................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............ACGCCTAT------------AGAAGCCAGAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GAGTACGCCTAT------------AGAAGCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................ATATCT-----GGTG----------------------------TGGGGT-----------------------AGC............................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...................CTAT------------AGAAGCCAGAACAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCGG------------TTACTATGGTT................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AAGTGACACCGAGTACGCCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGTCGCAGCGG------------TTACTA.....................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................AA----CCTC-TAATCATAACAG........................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................T-----GGTG----------------------------TGGGGT-----------------------AGCAAATCTAACAC.................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTGGGTCGCAGCGG------------TT.........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...............ACGCCTAT------------AGAAGCCAGAACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................TGAGATG--AATTGCTAAATTGA..............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGG------------TTACTATGGTTCC------AGCG....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGG------------TTACTATGGTTCC------AGCGAA..2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................TATCT-----GGTG----------------------------TGGGGT-----------------------AGCAA..........................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................CTTT-TC----------TCTCCTCTAA----CG.......................................................................1820.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AAAGTGACACCGAGTACGCCTAT------------AGAAGCCAGAACAATGTATGAAA-CACGTT------TA--------TT-ACTTTTC-------------------------CACATTG-T--TATAT-TTTGTAT--TAG-----TCTT----TGAAAGCACC---AGCAAATG---AAATTGGCATTGAGATG--AATGGCAAAATTGAAG-CACCAATT-----TGT--TTCA-AGTAGTCTAG--------------CTATAATATCT-----GGTC----------------------------TGGG-T-----------------------AGCAAATCTAACACGTAACCGATCTAACCGGCAGTATTTCTTT-TC----------TCTCTTCTAA----CCTC-TAACCATAACAGACTTTGGGTCGCAGCGG------------TTACTACGGTTCC------AGCGAAATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............GTACGCCTAT------------AGAAGCCAGAACAATGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00200200000000000000
....................TAT------------AGAAGCCAGAACAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00200200000000000000
.............GTACGCCTAT------------AGAAGCCAGAACAATGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000000000
.............GTACGCCTAT------------AGAAGCCAGAACAATGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100100000000000000
......ACACCGAGTACGCCTAT------------AGAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001000000000000
.....................AT------------AGAAGCCAGAACAATGTATGAAA-C.........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000000001000
...............................................................................................................................................................................................TTGAGATG--AATGGCAAAATTG...............................................................................................................................................................................................................................................................................2111.00100000100000000000
droSec2
AAAGTGACACCGAGTACGCCTAT------------AGAAGCCAGAACAATGTATGAAA-CACGTT------TA--------TC-ACTTTTC-------------------------CACATTG-T--TATAT-TTTGTAT--TAG-----TCTT----TGAGAGCACG---AGCAAATG---AAATTGGCATTGAGATG--AATGGCAAAATTGAAG-CACCAATT-----TGT--TTCA-AGTAGTCTAG--------------CTATAATATCT-----GGTG----------------------------TGGG-T-----------------------AGCAAATCTAACACGTAACCGATCTAACCGGCAATATTTCTTT-TC----------TCTCTTCTAA----CCTC-TAACCATAACAGACATTGGGTCGCAGCGG------------TTACTACGGATCC------AGCGAAATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAGCGG------------TTACTACGGATCC------AGC.....2411.0010001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACTACGGATCC------AGCGTT..1911.0010001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCAGCGG------------TTACTACGGATCC------AG......2411.0010001
..................................................................................................................................................................AGCACG---AGCAAATG---AAATTGGC.......................................................................................................................................................................................................................................................................................................2211.0010100
.......................................................................................................................................................................G---AGCAAATG---AAATTGGCATTGAGATG--............................................................................................................................................................................................................................................................................................2611.0010010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCAGCGG------------TTACTACGGATC...............2111.0011000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAGCGG------------TTACTACGGATCC------AGCG....2511.0010001
droYak3
AAAGTGACACCGAGTACGCCTAT------------AGAAGCCAGAACAATGTATGAAA-CACGTT------TA--------TC-TTTTCTC-------------------------CACATTG-T--TATAT-TTTGTAT--TAG-----TCTT----TGAAAGCACG---AGCAAATG---AAATTGGCATTGAGATA--GATGGCTAAATTGAGG-CACCAGTT-----TGT--TTCA-AGTAGTCTAA--------------TTATAAT--TT-----GGTG----------------------------TGGG-C-----------------------AGTCAATCTAACACTTAACCAATCTAACCGGCAGTATTTCTTT-TC----------TCTCTTCTAA----CCTC-TAACCATAACAGACTTTGGGTCGCAGCGG------------TTACTACGGTTCC------AGCGAGCTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..............................................................................................................................................................................................................................AGTT-----TGT--TTCA-AGTAGTCTAA--------------............................................................................................................................................................................................................................2111.00101000000000
...............................................................................................................................................................................AATG---AAATTGGCATTGAGATA--GAT.........................................................................................................................................................................................................................................................................................2411.00100100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................TAA----CCTC-TAACCATAACAG........................................................1911.00100010000000
droEre2
AAAGTGACACCGAGTACGCCAAT------------AGAAGCCAGAACAATGTATGAAA-CACGTT------TA--------CC-TTTTTTC-------------------------CACATTG-T--TATAT-TTTGTAT--TAG-----TCTT----TGAAAGCACG---AACAAAAG--AAAATTGGCATTGAGA------TGGCTAAATTGAAG-CACCATTT-----TGA--TTCA-AGTAGTCTAG--------------TTCTAAT--TT-----GGTG----------------------------TGGG-T-----------------------AGCCAATCTAACAAGTAACCAATCTAACCGGCAGTATTTCTTT-TC----------TCTCTTCTAA----CCTC-TAACCATAACAGACTTTGGGTCGCAGCGG------------TTACTACGGTTCC------AGCGAGATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...GTGACACCGAGTACGCCAAT------------AGAAGCCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000100
.........CCGAGTACGCCAAT------------AGAAGCCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAGCGG------------TTACTACGGTTCC------AGC.....2411.0010100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTACGGTTCC------AGCGAGA.1911.0010001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................G------------TTACTACGGTTCC------AGCGAGA.2111.0010100000
.........................................................................................................................................................................................................................................................................TTCTAAT--TT-----GGTG----------------------------TGGG-T-----------------------AGC............................................................................................................................................2111.0011000000

Generated: 05/18/2015 at 02:27 AM