ID:

dmo_2324

 Coordinate:

scaffold_6680:2663405-2663476 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-15.1 -14.4 -14.3 -14.3

Flybase annnotation

CDS [Dmoj\GI12809-cds]; exon [dmoj_GLEANR_12786:1]; exon [dmoj_GLEANR_12786:2]; CDS [Dmoj\GI12809-cds]; intron [Dmoj\GI12809-in]

Repeatable elements

NameClassFamilyStrand
(CAG)nSimple_repeatSimple_repeat+
mature
  1. scaffold_3929:4730-4752 +
  2. scaffold_5788:289-311 +
  3. scaffold_6308:205503-205525 +
  4. scaffold_6359:1038476-1038498 +
  5. scaffold_6359:3728135-3728157 +
  6. scaffold_6359:3776867-3776889 +
  7. scaffold_6473:9124658-9124680 +
  8. scaffold_6473:11365463-11365485 +
  9. scaffold_6473:16630309-16630331 +
  10. scaffold_6500:507023-507045 +
  11. scaffold_6540:7637195-7637217 +
  12. scaffold_6540:27735719-27735741 +
  13. scaffold_6540:27736079-27736101 +
  14. scaffold_6540:27960022-27960044 +
  15. scaffold_6680:212890-212912 +
  16. scaffold_6680:2316023-2316045 +
  17. dmo_2324  scaffold_6680:2663411-2663433 +
  18. scaffold_6680:5109218-5109240 +
  19. scaffold_6680:5109497-5109519 +
  20. scaffold_6680:5400958-5400980 +
star

Sense Strand Reads

##################################################------------------------------------------------------------------------##################################################
TTGCTCGCACAGCTGCAGCAGCAGCATAAATTTCAGCAGCAACAGCAGCAGCAGCAGCAGCAGCAACAACAACAGCAGCAGCAACAGCTCTCCAATGGAGCTGGCTCCAAGTACATCAACAGCAATACGAGTCGCAATAATCTGGCAACGCTTGTAGCGGCCATCAATGGAC
**************************************************((........((((..((.....((.(((.......)))))....))..)))).......))..........************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 M060
embryo
 V056
head
..............................................................................................................GTAGATCAACAGGAATATGAGT........................................ 22 3 2 1.50 3 0 3 0 0
.......................................................................................................................................AATAATCTGGCAACGCTTGTAGC.............. 23 0 1 1.00 1 1 0 0 0
..............................................................................................................GTCGATCAACAGCAATATGAGT........................................ 22 3 3 0.33 1 1 0 0 0
.................................................................................................................GATCAACAGCAATATGAGT........................................ 19 2 7 0.14 1 0 1 0 0
...............................TTCAGCAGCAACAGCAGCAGC........................................................................................................................ 21 0 7 0.14 1 0 0 1 0
........................................................GCAGCAGCAACAACAACAGCAGC............................................................................................. 23 0 20 0.10 2 2 0 0 0
..............................................................................................................................................TGGCAGCGCGTGTAGCGGC........... 19 2 14 0.07 1 0 0 0 1
..................................AGCAGCAACAGCAGCAGCAGCA.................................................................................................................... 22 0 20 0.05 1 0 0 1 0
.......................................................AGCAGCAGCAACAACAACAGC................................................................................................ 21 0 20 0.05 1 1 0 0 0
.......................................CAACAGCAGCAGCAGCAGC.................................................................................................................. 19 0 20 0.05 1 0 1 0 0
.............................................................AGCAACAACAACAGCAGCAGCAACAGC.................................................................................... 27 0 20 0.05 1 1 0 0 0
.............................................................AGCAACAACAACAGCAGCAGCAACA...................................................................................... 25 0 20 0.05 1 1 0 0 0
..................................AGCAGCAACAGCAGCAGCAGCAGC.................................................................................................................. 24 0 20 0.05 1 0 0 1 0
............................................................CAGCAACAACAACAGCAG.............................................................................................. 18 0 20 0.05 1 1 0 0 0
.......................................................AGCAGCAGCAACAACAACAGCA............................................................................................... 22 0 20 0.05 1 0 0 0 1
...........................................................GCAGCAACAACAACAGCAGCAGCAAC....................................................................................... 26 0 20 0.05 1 0 0 1 0
.....................................AGCAACAGCAGCAGCAGCAGCA................................................................................................................. 22 0 20 0.05 1 1 0 0 0
...........................................................GCAGCAACAACAACAGCAGCAG........................................................................................... 22 0 20 0.05 1 1 0 0 0

Anti-sense strand reads

AACGAGCGTGTCGACGTCGTCGTCGTATTTAAAGTCGTCGTTGTCGTCGTCGTCGTCGTCGTCGTTGTTGTTGTCGTCGTCGTTGTCGAGAGGTTACCTCGACCGAGGTTCATGTAGTTGTCGTTATGCTCAGCGTTATTAGACCGTTGCGAACATCGCCGGTAGTTACCTG
**************************************************((........((((..((.....((.(((.......)))))....))..)))).......))..........************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
.........................GATTCAAAGTCGTCGTTG................................................................................................................................. 18 2 20 0.10 2 2
..........................ATTCAAAGTCGTCATTGCC............................................................................................................................... 19 3 20 0.05 1 1
.CCGAGCGTGTCGAGGTCG......................................................................................................................................................... 18 2 20 0.05 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6680:2663355-2663526 + dmo_2324 TTG--------CTCGCACAG---------CTGCAGCAGC---AG---CATAAATTTCAGC----AGCA----AC------------------------A---GCAGCAGCAG------------C---AGCAGCA--GCA-----------------ACAACAACAGCAGCAGCAACAGC---TCTC------CAAT---GGAGC--------------------------------TGGC--------------------------------------TCCAAGTAC---ATCAA---CA------------------------------------G---C----------------------------A---------ATACGAGTC-----------------GCAA-TAATCTGGCAACGCTTGTAGCGG----------CC-ATCAATGGAC---
droVir3 scaffold_13049:4254498-4254693 + TTG--------CTCGCCCAG---------CTGCAGCAGC---AG---CACAAGTTCCA-------GGC----ACAGCAGCAACATCAGCAACAGCAGCA---------GCAACAGCAACAGCAGCAGCAGCAGCAGC--AT---------CAGCTGC--------A---------ACAGCAGCTCTC------GAAT---GGAGC--------------------------------TGGC--------------------------------------TCCAAGTAC---ATGAA---CA------------------------------------G---C----------------------------A---------ATACGAGTC-----------------GCAA-CAATCTGGCAACACTGGTCGCTG----------CC-ATCAACGGGC---
droGri2 scaffold_15110:10555157-10555322 - TTG--------CTCGCACAG---------CTGCAACAAC---AG---CATAAATTTCAGG----C-------AC------------------------A---------GCAGCAGCAGCAACAACAACAGCAGCA-------------------------GCAACAGCAGCA---GCAGC---TCTC------TAAT---GG-----------------------------------TGG-----------------------------------------CAAGTAC---AACAACAACA---------G------------------------------T----------------------------G---------CCACAAGTC-----------------GCAA-CAATCTGGCCACACTGGTGGCAG----------CC-ATAAACGGGC---
droWil2 scf2_1100000004558:214034-214202 - TCG--------CCCTCCCAG---------CAGCATCAGC---AG---CAACAACAGCAAC----ACCA----AC------------------------A---GCAGCAGCAG------------C---AGCAGCA--ACA-----------------ACAACAACAGCAGCAGCAACAAC------------------------------------------------------ATCAGGCCCATC------------------AAC---AGG-------C-------------------------AGTGGCTG------------CTGCAG----TG---C----------------------------A---------ACAGCAATT-----------------GG-C-CGGTGTGGGAATGCCACCAGGAG----------CC-ATCAATG------
dp5 XR_group6:12903867-12904037 - ATG--------CATCACCTT------CAAC---AGCAGCAGCAGCAGCAGCAGCATCAAC----AACA----AC------------------------A---GCAGCAGCAG------------C---AGCAACA--ACA-----------------GCAGCAGCAGCAGCA---GCAGCAACATC---------------------------------------------AGCA---------ACAGCTTCTCCAGCAG------------------------------CAGC---AACAGC---AACAACAG------------CAGCAGCAGCA----------------GC---------------A---------AC--------------------------AA-CAGCATGCCAGCATT---------------------------GGA----
droPer2 scaffold_8:1265292-1265474 - GCG--------GCTCTCCAA---------CAGCAGCAAC---AGCAGCAGGCAGCTCTCC----AGCA----GC------------------------A---GCAGCAGCAG------------C---AGCAGCA--GCA-----------------ACAGCAACAGCAGCAGCAACAGC---ACTCGGTGGCCAATCCTGGTGTCGCCGCCACTGCCATTATGTACGCCAATTTCGAGCTGCAGC------------------AGC---AGG-------T--------------------------------------GACCTTGC----------------------GTCAGC------------------------------------------------------------------------------------------T-ACAACTG------
droAna3 scaffold_12929:1995970-1996138 + TTG--------CTGCGACAG---------CAACGCCGG---------------CAGCAACA-GCA-------GC------AGCAGCAAC---------A---------GCAACAGCAGCAGCAACAACAGCAGCAGC--AA---------CAACAGC--------A---------ACAGCAACAGC---------------------------------------------AATGC-CGAC--------------------------------------AGCA---ACAGCAAC---AGCAGCAAC---ATGAGCAGCAAACACAGCAACAG------------------------------------------------------------------------------------------CAACAGCAACAG----------CT-ACTG--AGAC---
droBip1 scf7180000396569:1679173-1679342 - CAACCCCGCAG----CCCAC------CAGC---A---GC---AG---CACCCCCCGAT--------------------------------------GGC---------CTACCAGCAGCAGCAGCAGCAACTGCTGC--AA---------CAGCTGC--------AGCAGCA---------GCACA---------------------------------------------AGTTCCAGGCCCAGG------------CGCAGCTCACCCGCG-------G------------------------------------------------------------C----------------------------A---------ACACCAGCC-----------------GCAA-CAACCTGGCCACTCTGGTGGCGG----------CC-ATCAACGGGC---
droKik1 scf7180000302220:11922-12082 + CAG--------CAGCAGCAC---------CACCAGCAG---------------CAGCAGC----AACA----AC------------------------A------------------GCAGCAGCAGCAACAGCAGC--AG---------CAGCA-----CC---AACAGCAGCAACAGC------------------------------------------------------ACCAGCTGCAGC------------------ATC---ACA-------ACA---AC---AA---------------CAACAG---------------CAGC---A-GTC-TT--------------------TCCCTCAACAACAGCGACGCAGCTC-----------------------------------------GCAG----------CA-ATCTTTCAAC---
droFic1 scf7180000453882:422870-423040 + CAG--------CAGCAACAG---------CAGCAGCAG------------CAACAGCAAC----AGCA----GC------------------------A---------GCAGCAGCAGCAGCAGCAGCATCAGCAGC--AA---------CAGCAGC--------A---------ACAGCAACATG---------------------------------------------CAACACTGGCGGACG------------------T-----------------GAG-----TAGC---AACAGCAAC---CGGAG-------------------------------------------------------------------CAGCAGTC---------CCAATTTAGCAA-CA----------GTTGGTGGTGG----------CGAATCGCTGGCC---
droEle1 scf7180000491214:4817235-4817393 + GCA--------CAGCAGCAG---------CAGCAACAG---------------CAGCAACA-GCA-------GC------------------------AGCAGCAACAGCAG------------C---AGCAGCA--GCA-----------------ACAACAGCAGCAGCA---GCAGC---------------------------------------------------------AACCTCAGC------------------AGC---AGA-------C-------------------------------------------------------------AACCGATGCCAACAACAATACTTCC----------------CAGGATGCCGCACTCCTTGTTA------------------------AGCAA----------CA-TGCCATGCAT---
droRho1 scf7180000779974:13718-13902 - CAG--------CAGCAACAG---------CAACGGCAG---------------CAGCAACA----CCAACGCACAGCAGCAGCAACATCCGCCGATGGC---------GTACCAGCAGCAGCAGCAACAGTTGCTGC--AA---------CAGTTGC--------AGCAGCA---------GCACA---------------------------------------------AATTCCAGGCGCAGC------------------AAA---GAG-------G------------------------------------------------------------C----------------------------A---------ACACGAGTC-----------------GGAA-TAATCTGGCCACTTTGGTGGCGG----------CC-ATCAATGGTC---
droBia1 scf7180000302428:5893219-5893374 + AC----------------AGCAGCAGCAGCAGCAACAA---------------CAGCAGC----AGCA----GC------AGCAACAAC---------A---------GCAG---------CAGCAGCAGCAGCAAC--AACAGCAGCAACAAC-----------AGCAGCAGCA------ACAAC---------------------------------------------A---------GCAGCAGCAGCAACAACAG------------------------------CTGC---AACAAC---AACAACAG------------TTGCAGCAGCA------------------------------------------------------------------------------------------------G-----------C-AACAACAGCA---
droTak1 scf7180000415211:141003-141161 + CAA--------CAGCAGCAG---------CAGCAGCAA---------------CAGCAGCA-GCA-------GC------------------------AGCAGCAACAGCAG---------CAGCAACAGCAGCA-------------------------GCAACAGCAGCA---GCAGC---------------------------------------------------------------------ATCGTCAAGTG------------------------------CAGC---ACCAAC---AATTGCAG------------TTGCAGCAACAG---C----------------------------A---------ACACAGCTC------------------TAA-CAATCTGA--------TTGTGGG----------CC-ATCG--GGGC---
droEug1 scf7180000409554:4923804-4923979 - TGG--------CACC-CCAA---------CAGCAACAGC---AGCAGCAGCAACAACAAC----AGCA----AC------------------------A---GCAGCAGCAA------------C---AGCAGCA--GCA-----------------GCAACAACAGCAGCAGCAACAAC---------------------------------------------------------------AAC------------------AAC---AGATGATGATGCAACAAC---AGCAG---CA------------------------------------A---C----------------------------A---------TTACGGTAT-----------------GCTACCGATGAGGCCTAACTGAAAGCGG----------CT-GTCATGGGGTCCG
dm3 chr2R:20221012-20221172 - TGT--CCACGG----CGCAG------CAGC---A---GC---AG---CAACAACAGCAGC----AGCA----AC------------------------A---GCAGCAGCAA------------C---AGCAGCA--GCA-----------------ACAACAGCAGCAGCAGCAACC---------------------------------------------------------------CCAGC------------------AGC---AGA-------C-------------------------------------------------------------TACCGATGCGAACAACAACACGTCG----------------CAGGACGCGGCACTCCTGGTCA------------------------AGCAG----------CA-CGCCATGCAC---
droSim2 3l:3671577-3671752 - TAG--------CGGCAACAG---------CGGCAGCAA---------------CAGCAACGTGCA-------GC------AGCAACATCCACCGATGGC---------GTACCAGCAGCAGCAGCAGCAACTGCTGC--AA---------CAGCTGC--------AGCAGCA---------GCAGA---------------------------------------------AGTTCCAGGCGCAGC------------------AGC---GGG-------G------------------------------------------------------------C----------------------------A---------ACACCAGTC-----------------GCAA-TAATCTGGCCACTTTGGTGGCGG----------CC-ATCAATGGAC---
droSec2 scaffold_2:3775080-3775255 - TAG--------CGGCAACAG---------CGGCAGCAA---------------CAGCAACGTGCA-------GC------AGCAACATCCACCGATGGC---------GTACCAGCAGCAGCAGCAACAACTGCTGC--AA---------CAGCTTC--------AGCAGCA---------GCAGA---------------------------------------------AGTTCCAGGCGCAGC------------------AGC---GGG-------G------------------------------------------------------------C----------------------------A---------ACACCAGTC-----------------GCAA-TAATCTGGCCACTTTGGTGGCGG----------CC-ATCAATGGGC---
droYak3 2R:20188500-20188657 - TGT--CCACGG----CGCAG------CAGC---A---GC---AG---CAACAGCAGCAGC----AACA----AC------------------------A---GCAGCAGCAG------------C---AGCAACA--GCA-----------------GCAACAACAGCAGCAGCAACAGC------------------------------------------------------AGCAGCAGC------A------------------------------GCAACCAC---AGCAG---------------------------------CAGC---A-GAC-TACGGATGCGAACAACAACACATCG----------------CAGGACGCGTCACT--------------------------------------------------------G------
droEre2 scaffold_4690:13327932-13328094 - ATG--------CAAGAGCAG------CAAC---A---GC---AG---CAACAACAGCAGC----AGCA----AC------------------------A---GCAGCAGCAA------------C---AACAGCC--CCA-----------------GCAACAACAGCAGCAGCAACAGC------------------------------------------------------AGCAGCAGC------A------------------------------ACA---AC---AAC---AACA---------GCAG---------------CAGCAGCA----------------GC---------------A---------ACAACAGCA-----------------GCAG-CAA-----------------CAGGTGCACAAGTTC-ATTGATGAAC---

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
TTG--------CTCGCACAG---------CTGCAGCAGC---AG---CATAAATTTCAGC----AGCA----AC------------------------A---GCAGCAGCAG------------C---AGCAGCA--GCA-----------------ACAACAACAGCAGCAGCAACAGC---TCTC------CAAT---GGAGC--------------------------------TGGC--------------------------------------TCCAAGTAC---ATCAA---CA------------------------------------G---C----------------------------A---------ATACGAGTC-----------------GCAA-TAATCTGGCAACGCTTGTAGCGG----------CC-ATCAATGGAC---SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................................................................................................................................................................................................................................................................................................................................................................................................................AA-TAATCTGGCAACGCTTGTAGC............................2311.001100000
......................................................TTCAGC----AGCA----AC------------------------A---GCAGCAGC..............................................................................................................................................................................................................................................................................................................................................................2170.141000010
.................................................................................................................................GCAGCA--GCA-----------------ACAACAACAGCAGC.................................................................................................................................................................................................................................................................................................23200.102200000
.........................................................AGC----AGCA----AC------------------------A---GCAGCAGCAG------------C---A...........................................................................................................................................................................................................................................................................................................................................22200.051000010
................................................................................................................................AGCAGCA--GCA-----------------ACAACAACAGC....................................................................................................................................................................................................................................................................................................21200.051100000
..................................................................CA----AC------------------------A---GCAGCAGCAG------------C---AGC.........................................................................................................................................................................................................................................................................................................................................19200.051000001
......................................................................................................................................A--GCA-----------------ACAACAACAGCAGCAGCAACAGC---.....................................................................................................................................................................................................................................................................................27200.051100000
......................................................................................................................................A--GCA-----------------ACAACAACAGCAGCAGCAACA..........................................................................................................................................................................................................................................................................................25200.051100000
.........................................................AGC----AGCA----AC------------------------A---GCAGCAGCAG------------C---AGC.........................................................................................................................................................................................................................................................................................................................................24200.051000010
.....................................................................................................................................CA--GCA-----------------ACAACAACAGCAG..................................................................................................................................................................................................................................................................................................18200.051100000
................................................................................................................................AGCAGCA--GCA-----------------ACAACAACAGCA...................................................................................................................................................................................................................................................................................................22200.051000100
....................................................................................................................................GCA--GCA-----------------ACAACAACAGCAGCAGCAAC...........................................................................................................................................................................................................................................................................................26200.051000010
................................................................AGCA----AC------------------------A---GCAGCAGCAG------------C---AGCA........................................................................................................................................................................................................................................................................................................................................22200.051100000
....................................................................................................................................GCA--GCA-----------------ACAACAACAGCAGCAG...............................................................................................................................................................................................................................................................................................22200.051100000
droVir3
TTG--------CTCGCCCAG---------CTGCAGCAGC---AG---CACAAGTTCCA-------GGC----ACAGCAGCAACATCAGCAACAGCAGCA---------GCAACAGCAACAGCAGCAGCAGCAGCAGC--AT---------CAGCTGC--------A---------ACAGCAGCTCTC------GAAT---GGAGC--------------------------------TGGC--------------------------------------TCCAAGTAC---ATGAA---CA------------------------------------G---C----------------------------A---------ATACGAGTC-----------------GCAA-CAATCTGGCAACACTGGTCGCTG----------CC-ATCAACGGGC---SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................................TTCCA-------GGC----ACAGCAGCAACATCAGCAAC................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................A---CA------------------------------------G---C----------------------------A---------ATACGAGTC-----------------GCAA-CA...............................................2111.001000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................AC---ATGAA---CA------------------------------------G---C----------------------------A---------ATACGAGTC-----------------GC....................................................2311.001100000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................TCTC------GAAT---GGAGC--------------------------------TGGC--------------------------------------TCCAAG...............................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................C--AT---------CAGCTGC--------A---------ACAGCAGCTCTC------...........................................................................................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................TGGC--------------------------------------TCCAAGTAC---ATGAA---CA------------------------------------G---C----------------------------..........................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................AAT---GGAGC--------------------------------TGGC--------------------------------------TCCAAGTAC---AT.......................................................................................................................................................................2311.001000000000000000000100000000000000000000000000000000000000000000
..........................................................................................................................AGCAGCAGCAGCAGC--AT---------CAGC..................................................................................................................................................................................................................................................................................................................21200.255005000000000000000000000000000000000000000000000000000000000000
........................................................................................................................GCAGCAGCAGCAGCAGC--AT---------CAGC..................................................................................................................................................................................................................................................................................................................23200.204003100000000000000000000000000000000000000000000000000000000000
............................................................................................AGCAGCA---------GCAACAGCAACAGCAGCA..............................................................................................................................................................................................................................................................................................................................................25200.102000000000000000001000000000000010000000000000000000000000000000
.......................................................................................................................AGCAGCAGCAGCAGCAGC--AT---------C.....................................................................................................................................................................................................................................................................................................................21200.102000000000000000000000000000000001001000000000000000000000000000
................................................................................................GCA---------GCAACAGCAACAGCAGC...............................................................................................................................................................................................................................................................................................................................................20200.102002000000000000000000000000000000000000000000000000000000000000
...........................................................................GCAGCAACATCAGCAACAGCA............................................................................................................................................................................................................................................................................................................................................................................21120.081000000000000000000000000000000000000010000000000000000000000000
........................................................................ACAGCAGCAACATCAGCAACA...............................................................................................................................................................................................................................................................................................................................................................................21130.081001000000000000000000000000000000000000000000000000000000000000
.............................................................................AGCAACATCAGCAACAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................21150.071001000000000000000000000000000000000000000000000000000000000000
..............................................................................GCAACATCAGCAACAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................20160.061000000000000000000000000000001000000000000000000000000000000000
.........................................................................................AACAGCAGCA---------GCAACAGCAACAGCAGCA..............................................................................................................................................................................................................................................................................................................................................28170.061001000000000000000000000000000000000000000000000000000000000000
...................................................................................ATCAGCAACAGCAGCA---------GCAAC...........................................................................................................................................................................................................................................................................................................................................................21180.061000000000000010000000000000000000000000000000000000000000000000
............................................................................................................GCAACAGCAACAGCAGCAGCAGCAGCA.....................................................................................................................................................................................................................................................................................................................................27200.051001000000000000000000000000000000000000000000000000000000000000
.........................................................................................AACAGCAGCA---------GCAACAGCAACAGCA.................................................................................................................................................................................................................................................................................................................................................25200.051001000000000000000000000000000000000000000000000000000000000000
................................................................................................GCA---------GCAACAGCAACAGCAGCAGCA...........................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000010000000000000000000000000000000000000000
.................................................................................................CA---------GCAACAGCAACAGCAGCAGC............................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000000000000000000000000000000000000100
......................................................................................................................CAGCAGCAGCAGCAGCAGC--AT---------......................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000001000000000000000000000000000000000000
......................................................................................................................CAGCAGCAGCAGCAGCAGC--AT---------CA....................................................................................................................................................................................................................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................GCAGCAGCAGCAGC--AT---------CAGC..................................................................................................................................................................................................................................................................................................................20200.051000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................CAACAGCAGCAGCAGCAGCAGC--AT---------......................................................................................................................................................................................................................................................................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................AGCAGCAGCAGCAGCAGC--AT---------CA....................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000000000000000000000000000000000000010
......................................................................................AGCAACAGCAGCA---------GCAACAGC........................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000100000000000000000000000000000000000000000000000
.........................................................................................AACAGCAGCA---------GCAACAGCAACAGCAGT...............................................................................................................................................................................................................................................................................................................................................27200.051000000000000000000000000000000000001000000000000000000000000000
............................................................................................................GCAACAGCAACAGCAGCAGCAGC.........................................................................................................................................................................................................................................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
..............................................................................................CAGCA---------GCAACAGCAACAGCAGCAGC............................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000000010000000000000000000000000000000
...............................................................................................AGCA---------GCAACAGCAACAGCAGCA..............................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000000001000000000000000000000000000000
.................................................................................................CA---------GCAACAGCAACAGCAGCAG.............................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000100000000000000000000000000000000000000
..............................................................................................................AACAGCAACAGCAGCAGCA...........................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000001000000000000000000000000000000
.......................................................................................GCAACAGCAGCA---------GCAACA..........................................................................................................................................................................................................................................................................................................................................................18200.051000000000000000000000000000000010000000000000000000000000000000
droGri2
TTG--------CTCGCACAG---------CTGCAACAAC---AG---CATAAATTTCAGG----C-------AC------------------------A---------GCAGCAGCAGCAACAACAACAGCAGCA-------------------------GCAACAGCAGCA---GCAGC---TCTC------TAAT---GG-----------------------------------TGG-----------------------------------------CAAGTAC---AACAACAACA---------G------------------------------T----------------------------G---------CCACAAGTC-----------------GCAA-CAATCTGGCCACACTGGTGGCAG----------CC-ATAAACGGGC---SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.......................................................................................................................................................................CAGCA---GCAGC---TCTC------TAAT---GG-----------------------------------TGG-----------------------------------------...................................................................................................................................................................................2311.00110
.........................................................................C------------------------A---------GCAGCAGCAGCAACAACA..............................................................................................................................................................................................................................................................................................................................................20200.15330
......................................................................................................................CAACAACAACAGCAGCA-------------------------GCA.........................................................................................................................................................................................................................................................................................................20200.05101
........................................................................................................................ACAACAACAGCAGCA-------------------------GCAACAGCA...................................................................................................................................................................................................................................................................................................24200.05110
droWil2
TCG--------CCCTCCCAG---------CAGCATCAGC---AG---CAACAACAGCAAC----ACCA----AC------------------------A---GCAGCAGCAG------------C---AGCAGCA--ACA-----------------ACAACAACAGCAGCAGCAACAAC------------------------------------------------------ATCAGGCCCATC------------------AAC---AGG-------C-------------------------AGTGGCTG------------CTGCAG----TG---C----------------------------A---------ACAGCAATT-----------------GG-C-CGGTGTGGGAATGCCACCAGGAG----------CC-ATCAATG------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................................................................................................................................................................................................................................................................................................................................................................................................CGGTGTGGGAATGCCACCAGGAG----------CC-ATC..........2811.00100100
...........................................................................................................................................................................................................................................................................................................................................................................................................................CGGTGTGGGAATGCCACCAGGAG----------C...............2411.00100100
..................................................................................................................................................................................................................................................................................................................................................................................................ATT-----------------GG-C-CGGTGTGGGAATGCCACCAGG............................2711.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................AGCAATT-----------------GG-C-CGGTGTGGGA.......................................2011.00100100
.............................................................................................................................................................................CAACAAC------------------------------------------------------ATCAGGCCCATC------------------AAC---AG............................................................................................................................................................................................2411.00101000
.....................................................................................................................................CA--ACA-----------------ACAACAACAGCAGCA................................................................................................................................................................................................................................................................................................20200.20400040
...............................................................................................................................................................AACAACAGCAGCAGCAACA..........................................................................................................................................................................................................................................................................................19200.20400040
..............................AGCATCAGC---AG---CAACAACAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................2250.20100010
.........................................................AAC----ACCA----AC------------------------A---GCAGCAGCA.............................................................................................................................................................................................................................................................................................................................................................19200.10200020
...............................................................................................................................................................AACAACAGCAGCAGCAACAAC------------------------------------------------------A.................................................................................................................................................................................................................................22200.05100010
.........................................................................................................GCAGCAG------------C---AGCAGCA--ACA-----------------ACA............................................................................................................................................................................................................................................................................................................21200.05100010
..........................................................................................................................................CA-----------------ACAACAACAGCAGCAGCAA............................................................................................................................................................................................................................................................................................21200.05101000
..............................................................................................................................................................CAACAACAGCAGCAGCAACAAC------------------------------------------------------A.................................................................................................................................................................................................................................23200.05100010
....................................................................................................................................GCA--ACA-----------------ACAACAACAGCAGCAGCA.............................................................................................................................................................................................................................................................................................24200.05101000
.........................................................AAC----ACCA----AC------------------------A---GCAGCAGC..............................................................................................................................................................................................................................................................................................................................................................18200.05100010
............................................................................................................GCAG------------C---AGCAGCA--ACA-----------------ACAACA.........................................................................................................................................................................................................................................................................................................21200.05100100
................................................................................................................................AGCAGCA--ACA-----------------ACAACAACAGCAG..................................................................................................................................................................................................................................................................................................23200.05101000
dp5
ATG--------CATCACCTT------CAAC---AGCAGCAGCAGCAGCAGCAGCATCAAC----AACA----AC------------------------A---GCAGCAGCAG------------C---AGCAACA--ACA-----------------GCAGCAGCAGCAGCA---GCAGCAACATC---------------------------------------------AGCA---------ACAGCTTCTCCAGCAG------------------------------CAGC---AACAGC---AACAACAG------------CAGCAGCAGCA----------------GC---------------A---------AC--------------------------AA-CAGCATGCCAGCATT---------------------------GGA----SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................CCTT------CAAC---AGCAGCAGCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.................................................................................................................................................................................AGCAACATC---------------------------------------------AGCA---------ACAGCTTCTCCAGCA.........................................................................................................................................................................................................2811.0010010000000
ATG--------CATCACCTT------CAAC---AGCAGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.................CTT------CAAC---AGCAGCAGCAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................2030.3310100000000
.......................................................TCAAC----AACA----AC------------------------A---GCAGCAGCAG------------C---A...........................................................................................................................................................................................................................................................................................................................................2430.3310001000000
.......................................................TCAAC----AACA----AC------------------------A---GCAGCAGC..............................................................................................................................................................................................................................................................................................................................................................2050.2010100000000
...............................................................................................................G------------C---AGCAACA--ACA-----------------GCAGCAGC.......................................................................................................................................................................................................................................................................................................20200.2040400000000
...........................................................................................................AGCAG------------C---AGCAACA--ACA-----------------GCAGC..........................................................................................................................................................................................................................................................................................................21200.2040400000000
...........................................................................................................................................................................................................................................................CTCCAGCAG------------------------------CAGC---AACAGC---AACC......................................................................................................................................................2350.2010010000000
...........................................GCAGCAGCAGCATCAAC----AACA----....................................................................................................................................................................................................................................................................................................................................................................................................2170.1410000100000
....................................................................................................................................ACA--ACA-----------------GCAGCAGCAGCAGC.................................................................................................................................................................................................................................................................................................20200.1020200000000
...................................................................................................................................................................................................................................................................................................AGC---AACAGC---AACAACAG------------CAGCAGCAGC............................................................................................................................27150.0710000100000
.....................................................................................................................................................................AGCAGCA---GCAGCAACATC---------------------------------------------AGC..................................................................................................................................................................................................................................21180.0610000100000
.....................................................................................................................................CA--ACA-----------------GCAGCAGCAGCAGCA---GCAGCAAC.....................................................................................................................................................................................................................................................................................28190.0510001000000
..................................................................................................................................................................................................................................................................................................................AACAACAG------------CAGCAGCAGCA----------------GC---------------..........................................................................................21200.0510000100000
................................................................................................................................................................GCAGCAGCAGCA---GCAGCAACATC---------------------------------------------.....................................................................................................................................................................................................................................23200.0510100000000
..................................................................................................................................................................AGCAGCAGCA---GCAGCAACATC---------------------------------------------.....................................................................................................................................................................................................................................21200.0510100000000
...........................................................C----AACA----AC------------------------A---GCAGCAGCAG------------C---AGCAAC......................................................................................................................................................................................................................................................................................................................................25200.0510010000000
..................................................................................................................................................................................................................................................................................................................AACAACAG------------CAGCAGCAGCA----------------GC---------------A---------................................................................................22200.0510100000000
................................................................AACA----AC------------------------A---GCAGCAGCAG------------C---AGCA........................................................................................................................................................................................................................................................................................................................................22200.0510010000000
....................................AGCAGCAGCAGCAGCAGCATC...................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000010000
................................................................................................................................AGCAACA--ACA-----------------GCAGCAGCAGC....................................................................................................................................................................................................................................................................................................21200.0510000100000
................................................................................................................................................................................................................................................................GCAG------------------------------CAGC---AACAGC---AACAACAG------------C.....................................................................................................................................23200.0510000100000
droPer2
GCG--------GCTCTCCAA---------CAGCAGCAAC---AGCAGCAGGCAGCTCTCC----AGCA----GC------------------------A---GCAGCAGCAG------------C---AGCAGCA--GCA-----------------ACAGCAACAGCAGCAGCAACAGC---ACTCGGTGGCCAATCCTGGTGTCGCCGCCACTGCCATTATGTACGCCAATTTCGAGCTGCAGC------------------AGC---AGG-------T--------------------------------------GACCTTGC----------------------GTCAGC------------------------------------------------------------------------------------------T-ACAACTG------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................GC------------------------A---GCAGCAGCAG------------C---AGCAGCA--...................................................................................................................................................................................................................................................................................................................................21200.102002000
..........................................................................................................CAGCAG------------C---AGCAGCA--GCA-----------------ACAGCAACAGCA...................................................................................................................................................................................................................................................................................................29200.051001000
..........................................................................................................................................CA-----------------ACAGCAACAGCAGCAGC..............................................................................................................................................................................................................................................................................................19200.051001000
droAna3
TTG--------CTGCGACAG---------CAACGCCGG---------------CAGCAACA-GCA-------GC------AGCAGCAAC---------A---------GCAACAGCAGCAGCAACAACAGCAGCAGC--AA---------CAACAGC--------A---------ACAGCAACAGC---------------------------------------------AATGC-CGAC--------------------------------------AGCA---ACAGCAAC---AGCAGCAAC---ATGAGCAGCAAACACAGCAACAG------------------------------------------------------------------------------------------CAACAGCAACAG----------CT-ACTG--AGAC---SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................................................................................................................AGCAACAACAGCAGCAGC--.................................................................................................................................................................................................................................................................................................................................18200.255050000
.................................................................................GCAGCAAC---------A---------GCAACAGCAGCAGC..................................................................................................................................................................................................................................................................................................................................................23200.153120000
...................................CGG---------------CAGCAACA-GCA-------GC------AGCAG.......................................................................................................................................................................................................................................................................................................................................................................................2180.131100000
............................................................A-GCA-------GC------AGCAGCAAC---------A---------GCAACA..........................................................................................................................................................................................................................................................................................................................................................22200.102020000
................................................................................AGCAGCAAC---------A---------GCAACAGCA.......................................................................................................................................................................................................................................................................................................................................................19200.102101000
...................................................................................AGCAAC---------A---------GCAACAGCAGCAGC..................................................................................................................................................................................................................................................................................................................................................21200.102010001
........................................................CAACA-GCA-------GC------AGCAGCAAC---------A---------GC..............................................................................................................................................................................................................................................................................................................................................................22200.102020000
.......................................................GCAACA-GCA-------GC------AGCAGCAAC---------A---------GCA.............................................................................................................................................................................................................................................................................................................................................................24200.102020000
......................................................AGCAACA-GCA-------GC------AGCAGCAAC---------..........................................................................................................................................................................................................................................................................................................................................................................21200.102020000
.........................................................AACA-GCA-------GC------AGCAGCAAC---------A---------GC..............................................................................................................................................................................................................................................................................................................................................................21200.102020000
.......................................................GCAACA-GCA-------GC------AGCAGCAAC---------A---------GCAAC...........................................................................................................................................................................................................................................................................................................................................................26200.102000002
...........................................................................................................................ACAACAGCAGCAGC--AA---------CA....................................................................................................................................................................................................................................................................................................................18200.051010000
...................................................................................................................................AGCAGC--AA---------CAACAGC--------A---------ACAGCA.......................................................................................................................................................................................................................................................................................22200.051010000
.....................................................................................................................GCAGCAACAACAGCAGCAGC--A................................................................................................................................................................................................................................................................................................................................21200.051100000
....................................................................................................................AGCAGCAACAACAGCAGC......................................................................................................................................................................................................................................................................................................................................18200.051010000
.................................................................................................................AGCAGCAGCAACAACAGCAGCAGC--A................................................................................................................................................................................................................................................................................................................................25200.051000001
............................................................A-GCA-------GC------AGCAGCAAC---------A---------GCAACAGC........................................................................................................................................................................................................................................................................................................................................................24200.051010000
.................................................................................................................AGCAGCAGCAACAACAGCAGC......................................................................................................................................................................................................................................................................................................................................21200.051010000
...............................................................CA-------GC------AGCAGCAAC---------A---------GCAACAGC........................................................................................................................................................................................................................................................................................................................................................22200.051010000
.................................................................................GCAGCAAC---------A---------GCAACAGCAGCAGCAAC...............................................................................................................................................................................................................................................................................................................................................26200.051010000
..........................................................ACA-GCA-------GC------AGCAGCAAC---------A---------GCAA............................................................................................................................................................................................................................................................................................................................................................22200.051100000
.................................................................................................................................GCAGCAGC--AA---------CAACAGC--------A---------AC...........................................................................................................................................................................................................................................................................................20200.051100000
............................................................A-GCA-------GC------AGCAGCAAC---------A---------GCAACAGCAGC.....................................................................................................................................................................................................................................................................................................................................................27200.051000001
.........................................................AACA-GCA-------GC------AGCAGCAAC---------A---------GCA.............................................................................................................................................................................................................................................................................................................................................................22200.051010000
.............................................................................................................CAACAGCAGCAGCAACAACAGCAGCA.....................................................................................................................................................................................................................................................................................................................................26200.051010000
..........................................................................................................................AACAACAGCAGCAGC--AA---------CA....................................................................................................................................................................................................................................................................................................................19200.051010000
............................................................A-GCA-------GC------AGCAGCAAC---------A---------GCA.............................................................................................................................................................................................................................................................................................................................................................19200.051000001
......................................................AGCAACA-GCA-------GC------AGCAGCAAC---------A---------GC..............................................................................................................................................................................................................................................................................................................................................................24200.051010000
......................................................AGCAACA-GCA-------GC------AGCAGCA.....................................................................................................................................................................................................................................................................................................................................................................................19200.051010000
..............................................................................................................................ACAGCAGCAGC--AA---------CAACAGC--------A---------.............................................................................................................................................................................................................................................................................................21200.051000001
...................................................................................................................................AGCAGC--AA---------CAACAGC--------A---------ACAGC........................................................................................................................................................................................................................................................................................21200.051010000
......................................................................................................................................................CAACAGC--------A---------ACAGCAACAGC---------------------------------------------.....................................................................................................................................................................................................................................19200.051010000
......................................................................................AAC---------A---------GCAACAGCAGCAGCAA................................................................................................................................................................................................................................................................................................................................................20200.051010000
............................................................................................................................CAACAGCAGCAGC--AA---------CAACAGC--------A---------.............................................................................................................................................................................................................................................................................................23200.051100000
..........................................................ACA-GCA-------GC------AGCAGCAAC---------A---------GCAACA..........................................................................................................................................................................................................................................................................................................................................................24200.051010000
.................................................................................................................AGCAGCAGCAACAACAGCAGCAGC--.................................................................................................................................................................................................................................................................................................................................24200.051000001
.......................................................................................................................AGCAACAACAGCAGCAGC--AA---------C.....................................................................................................................................................................................................................................................................................................................21200.051000001
................................................................................AGCAGCAAC---------A---------GCAACAGCAGC.....................................................................................................................................................................................................................................................................................................................................................21200.051010000
................................................................................................................................AGCAGCAGC--AA---------CAACAGC--------A---------ACAGC........................................................................................................................................................................................................................................................................................24200.051010000
......................................................AGCAACA-GCA-------GC------AGCAGCAAC---------A---------GCA.............................................................................................................................................................................................................................................................................................................................................................25200.051001000
..................................................................................................................................................................................................................................................................................................................................ACAGCAACAG------------------------------------------------------------------------------------------CAACAGCA..............................18200.051010000
...........................................................CA-GCA-------GC------AGCAGCAAC---------A---------GCAAC...........................................................................................................................................................................................................................................................................................................................................................22200.051010000
....................................................................................................................................GCAGC--AA---------CAACAGC--------A---------ACAGC........................................................................................................................................................................................................................................................................................20200.051010000
..............................................................................................................AACAGCAGCAGCAACAACA...........................................................................................................................................................................................................................................................................................................................................19200.051100000
.....................................................CAGCAACA-GCA-------GC------AGCAGCAAC---------..........................................................................................................................................................................................................................................................................................................................................................................22200.051010000
droBip1
CAACCCCGCAG----CCCAC------CAGC---A---GC---AG---CACCCCCCGAT--------------------------------------GGC---------CTACCAGCAGCAGCAGCAGCAACTGCTGC--AA---------CAGCTGC--------AGCAGCA---------GCACA---------------------------------------------AGTTCCAGGCCCAGG------------CGCAGCTCACCCGCG-------G------------------------------------------------------------C----------------------------A---------ACACCAGCC-----------------GCAA-CAACCTGGCCACTCTGGTGGCGG----------CC-ATCAACGGGC---SizeHit CountTotal NormTotal
No Reads
droKik1
CAG--------CAGCAGCAC---------CACCAGCAG---------------CAGCAGC----AACA----AC------------------------A------------------GCAGCAGCAGCAACAGCAGC--AG---------CAGCA-----CC---AACAGCAGCAACAGC------------------------------------------------------ACCAGCTGCAGC------------------ATC---ACA-------ACA---AC---AA---------------CAACAG---------------CAGC---A-GTC-TT--------------------TCCCTCAACAACAGCGACGCAGCTC-----------------------------------------GCAG----------CA-ATCTTTCAAC---SizeHit CountTotal NormTotal
No Reads
droFic1
CAG--------CAGCAACAG---------CAGCAGCAG------------CAACAGCAAC----AGCA----GC------------------------A---------GCAGCAGCAGCAGCAGCAGCATCAGCAGC--AA---------CAGCAGC--------A---------ACAGCAACATG---------------------------------------------CAACACTGGCGGACG------------------T-----------------GAG-----TAGC---AACAGCAAC---CGGAG-------------------------------------------------------------------CAGCAGTC---------CCAATTTAGCAA-CA----------GTTGGTGGTGG----------CGAATCGCTGGCC---SizeHit CountTotal NormTotal
No Reads
droEle1
GCA--------CAGCAGCAG---------CAGCAACAG---------------CAGCAACA-GCA-------GC------------------------AGCAGCAACAGCAG------------C---AGCAGCA--GCA-----------------ACAACAGCAGCAGCA---GCAGC---------------------------------------------------------AACCTCAGC------------------AGC---AGA-------C-------------------------------------------------------------AACCGATGCCAACAACAATACTTCC----------------CAGGATGCCGCACTCCTTGTTA------------------------AGCAA----------CA-TGCCATGCAT---SizeHit CountTotal NormTotal
No Reads
droRho1
CAG--------CAGCAACAG---------CAACGGCAG---------------CAGCAACA----CCAACGCACAGCAGCAGCAACATCCGCCGATGGC---------GTACCAGCAGCAGCAGCAACAGTTGCTGC--AA---------CAGTTGC--------AGCAGCA---------GCACA---------------------------------------------AATTCCAGGCGCAGC------------------AAA---GAG-------G------------------------------------------------------------C----------------------------A---------ACACGAGTC-----------------GGAA-TAATCTGGCCACTTTGGTGGCGG----------CC-ATCAATGGTC---SizeHit CountTotal NormTotal
No Reads
droBia1
AC----------------AGCAGCAGCAGCAGCAACAA---------------CAGCAGC----AGCA----GC------AGCAACAAC---------A---------GCAG---------CAGCAGCAGCAGCAAC--AACAGCAGCAACAAC-----------AGCAGCAGCA------ACAAC---------------------------------------------A---------GCAGCAGCAGCAACAACAG------------------------------CTGC---AACAAC---AACAACAG------------TTGCAGCAGCA------------------------------------------------------------------------------------------------G-----------C-AACAACAGCA---SizeHit CountTotal NormTotal
No Reads
droTak1
CAA--------CAGCAGCAG---------CAGCAGCAA---------------CAGCAGCA-GCA-------GC------------------------AGCAGCAACAGCAG---------CAGCAACAGCAGCA-------------------------GCAACAGCAGCA---GCAGC---------------------------------------------------------------------ATCGTCAAGTG------------------------------CAGC---ACCAAC---AATTGCAG------------TTGCAGCAACAG---C----------------------------A---------ACACAGCTC------------------TAA-CAATCTGA--------TTGTGGG----------CC-ATCG--GGGC---SizeHit CountTotal NormTotal
No Reads
droEug1
TGG--------CACC-CCAA---------CAGCAACAGC---AGCAGCAGCAACAACAAC----AGCA----AC------------------------A---GCAGCAGCAA------------C---AGCAGCA--GCA-----------------GCAACAACAGCAGCAGCAACAAC---------------------------------------------------------------AAC------------------AAC---AGATGATGATGCAACAAC---AGCAG---CA------------------------------------A---C----------------------------A---------TTACGGTAT-----------------GCTACCGATGAGGCCTAACTGAAAGCGG----------CT-GTCATGGGGTCCGSizeHit CountTotal NormTotal
No Reads
dm3
TGT--CCACGG----CGCAG------CAGC---A---GC---AG---CAACAACAGCAGC----AGCA----AC------------------------A---GCAGCAGCAA------------C---AGCAGCA--GCA-----------------ACAACAGCAGCAGCAGCAACC---------------------------------------------------------------CCAGC------------------AGC---AGA-------C-------------------------------------------------------------TACCGATGCGAACAACAACACGTCG----------------CAGGACGCGGCACTCCTGGTCA------------------------AGCAG----------CA-CGCCATGCAC---SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................GAACAACAACACGTCG----------------CAGGA........................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.............................................................................................................................................................ACAACAGCAGCAGCAGCAACC---------------------------------------------------------------...........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................CA--GCA-----------------ACAACAGCAGCAGCAG...............................................................................................................................................................................................................................................................................................21200.60120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000002090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................GC---AG---CAACAACAGCAGC----AGCA----AC------------------------A---G.....................................................................................................................................................................................................................................................................................................................................................................25150.4770000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................GC---AG---CAACAACAGCAGC----AGCA----AC------------------------A---......................................................................................................................................................................................................................................................................................................................................................................24200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................CA-----------------ACAACAGCAGCAGCAGC..............................................................................................................................................................................................................................................................................................19200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000
.............................C---A---GC---AG---CAACAACAGCAGC----AGCA----AC------------------------A---GCA...................................................................................................................................................................................................................................................................................................................................................................29100.2020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................G---CAACAACAGCAGC----AGCA----AC------------------------A---GCA...................................................................................................................................................................................................................................................................................................................................................................24170.1830000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000
................................................AACAACAGCAGC----AGCA----AC------------------------A---GCAGCAGC..............................................................................................................................................................................................................................................................................................................................................................2760.1710000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................CAACAACAGCAGC----AGCA----AC------------------------A---GCAGC.................................................................................................................................................................................................................................................................................................................................................................25130.1520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................G---CAACAACAGCAGC----AGCA----AC------------------------A---GC....................................................................................................................................................................................................................................................................................................................................................................23200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000
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..........................CAGC---A---GC---AG---CAACAACAGCAGC----AG..........................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................A------------C---AGCAGCA--GCA-----------------ACAACA.........................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................AACAACAGCAGC----AGCA----AC------------------------A---......................................................................................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................A--GCA-----------------ACAACAGCAGCAGCAGCAAC...........................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................AG---CAACAACAGCAGC----AGC.........................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TAG--------CGGCAACAG---------CGGCAGCAA---------------CAGCAACGTGCA-------GC------AGCAACATCCACCGATGGC---------GTACCAGCAGCAGCAGCAGCAACTGCTGC--AA---------CAGCTGC--------AGCAGCA---------GCAGA---------------------------------------------AGTTCCAGGCGCAGC------------------AGC---GGG-------G------------------------------------------------------------C----------------------------A---------ACACCAGTC-----------------GCAA-TAATCTGGCCACTTTGGTGGCGG----------CC-ATCAATGGAC---SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................AGCAACGTGCA-------GC------AGCAACATCC..................................................................................................................................................................................................................................................................................................................................................................................2311.00100001000000000000
...........................................................................................CCGATGGC---------GTACCAGCAGCAGCA.................................................................................................................................................................................................................................................................................................................................................2311.00100000000000100000
...............AACAG---------CGGCAGCAA---------------CA.....................................................................................................................................................................................................................................................................................................................................................................................................................16190.05100000000001000000
................................................................................................................CAGCAGCAGCAGCAGCAACTG.......................................................................................................................................................................................................................................................................................................................................21200.05100100000000000000
droSec2
TAG--------CGGCAACAG---------CGGCAGCAA---------------CAGCAACGTGCA-------GC------AGCAACATCCACCGATGGC---------GTACCAGCAGCAGCAGCAACAACTGCTGC--AA---------CAGCTTC--------AGCAGCA---------GCAGA---------------------------------------------AGTTCCAGGCGCAGC------------------AGC---GGG-------G------------------------------------------------------------C----------------------------A---------ACACCAGTC-----------------GCAA-TAATCTGGCCACTTTGGTGGCGG----------CC-ATCAATGGGC---SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..........................................................................................................................................................................................................................................TCCAGGCGCAGC------------------AGC---GGG-------G------------------------------------------------------------C----------------------------A---------AC..............................................................................2311.0010010
............................................................................................................GTACCAGCAGCAGCAGCAACA...........................................................................................................................................................................................................................................................................................................................................2120.5010001
.....................................A---------------CAGCAACGTGCA-------GC------AGCAACG.....................................................................................................................................................................................................................................................................................................................................................................................2220.5010001
................................................................................................................CAGCAGCAGCAGCAACAAC.........................................................................................................................................................................................................................................................................................................................................19200.0510001
droYak3
TGT--CCACGG----CGCAG------CAGC---A---GC---AG---CAACAGCAGCAGC----AACA----AC------------------------A---GCAGCAGCAG------------C---AGCAACA--GCA-----------------GCAACAACAGCAGCAGCAACAGC------------------------------------------------------AGCAGCAGC------A------------------------------GCAACCAC---AGCAG---------------------------------CAGC---A-GAC-TACGGATGCGAACAACAACACATCG----------------CAGGACGCGTCACT--------------------------------------------------------G------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........G----CGCAG------CAGC---A---GC---AG---CAACAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................2370.14101000000000
.........................................................................................................................................................................GCAGCAACAGC------------------------------------------------------AGCAGCAGC------A------------------------------G...................................................................................................................................................................................22200.10202000000000
.........................................................................................................................................................................GCAGCAACAGC------------------------------------------------------AGCAGCAGC------A------------------------------GCA.................................................................................................................................................................................24200.10202000000000
..............................................................................................................AG------------C---AGCAACA--GCA-----------------GCAACAACAGCAGC.................................................................................................................................................................................................................................................................................................27150.07100100000000
.........................................................................................................................................GCA-----------------GCAACAACAGCAGCAGCAACAGC------------------------------------------------------AGC...............................................................................................................................................................................................................................29180.06100100000000
...............................................................................................................................................................AACAACAGCAGCAGCAACAGC------------------------------------------------------..................................................................................................................................................................................................................................21200.05100000010000
......................................................................................................................................................................GCAGCAGCAACAGC------------------------------------------------------AGCAGCAGC------A------------------------------G...................................................................................................................................................................................25200.05101000000000
.........................................................................................................................................GCA-----------------GCAACAACAGCAGCAGCAACAG.........................................................................................................................................................................................................................................................................................25200.05101000000000
..........................................................GC----AACA----AC------------------------A---GCAGCAGCAG------------C---AGC.........................................................................................................................................................................................................................................................................................................................................23200.05101000000000
..........................................AG---CAACAGCAGCAGC----AACA----....................................................................................................................................................................................................................................................................................................................................................................................................19200.05101000000000
................................................AACAGCAGCAGC----AACA----AC------------------------A---GCAGCA................................................................................................................................................................................................................................................................................................................................................................25200.05101000000000
..................................................................................................A---GCAGCAGCAG------------C---AGCAACA--GCA-----------------GCAAC..........................................................................................................................................................................................................................................................................................................27200.05100000000001
..............................................................................................................................................................CAACAACAGCAGCAGCAACAGC------------------------------------------------------AG................................................................................................................................................................................................................................24200.05101000000000
.........................................................................................................................................................................GCAGCAACAGC------------------------------------------------------AGCAGCA...........................................................................................................................................................................................................................18200.05100100000000
......................................................................................................................................A--GCA-----------------GCAACAACAGCAGCAGCAACAGC------------------------------------------------------..................................................................................................................................................................................................................................27200.05100100000000
.................CAG------CAGC---A---GC---AG---CAACAGCAGC...................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000000000
...................................................................................................................................AACA--GCA-----------------GCAACAACAGCAGCAGC..............................................................................................................................................................................................................................................................................................24200.05101000000000
..................................................................................................................................CAACA--GCA-----------------GCAACAACAGCAGCA................................................................................................................................................................................................................................................................................................23200.05101000000000
................................................AACAGCAGCAGC----AACA----AC------------------------A---GCAGC.................................................................................................................................................................................................................................................................................................................................................................24200.05101000000000
.......................................................GCAGC----AACA----AC------------------------A---GCAGCAGC..............................................................................................................................................................................................................................................................................................................................................................20200.05100100000000
droEre2
ATG--------CAAGAGCAG------CAAC---A---GC---AG---CAACAACAGCAGC----AGCA----AC------------------------A---GCAGCAGCAA------------C---AACAGCC--CCA-----------------GCAACAACAGCAGCAGCAACAGC------------------------------------------------------AGCAGCAGC------A------------------------------ACA---AC---AAC---AACA---------GCAG---------------CAGCAGCA----------------GC---------------A---------ACAACAGCA-----------------GCAG-CAA-----------------CAGGTGCACAAGTTC-ATTGATGAAC---SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................GCAG-CAA-----------------CAGGTGCACAAGTT...............2111.0010100000
..................................................................................................................................CAGCC--CCA-----------------GCAACAACAGCAGCA................................................................................................................................................................................................................................................................................................2311.0011000000
...............................................................................................................................................................................................................................................................................................................................................................................................ACAGCA-----------------GCAG-CAA-----------------CAGGT........................1840.2510000010
........................................................................................................................................................................................................................................................................................ACA---AC---AAC---AACA---------GCAG---------------CAGC...............................................................................................................................20200.1530000030
............................................................................................................................................................................................................................................................................................................................................................................................ACAACAGCA-----------------GCAG-CAA-----------------CAGG.........................2080.1311000000
..................................................................................................A---GCAGCAGCAA------------C---AACAGCC--...................................................................................................................................................................................................................................................................................................................................19100.1010100000
.....................................................................................................................................................................................................................................................................................................C---AACA---------GCAG---------------CAGCAGCA----------------GC---------------A---------................................................................................20200.1020000020
...................................................................................................................................................................................C------------------------------------------------------AGCAGCAGC------A------------------------------ACA---AC---AAC---AACA---------GC....................................................................................................................................................25110.0910000010
...............................................................................................................................................................................................................................................CAGC------A------------------------------ACA---AC---AAC---AACA---------GCAG---------------CAGCA..............................................................................................................................26160.0610000100
................................................................................................................................................................ACAACAGCAGCAGCAACAGC------------------------------------------------------AG................................................................................................................................................................................................................................22200.0511000000
................................................................................................................................................................................................................................................AGC------A------------------------------ACA---AC---AAC---AACA---------GCAG---------------CAGG...............................................................................................................................24200.0510001000
...........................................................................................................................................................................AGCAACAGC------------------------------------------------------AGCAGCAGC------A------------------------------AC..................................................................................................................................................................................21200.0510100000
.................................................ACAACAGCAGC----AGCA----AC------------------------A---GCAG..................................................................................................................................................................................................................................................................................................................................................................22200.0511000000
.................................................................GCA----AC------------------------A---GCAGCAGCAA------------C---AAC.........................................................................................................................................................................................................................................................................................................................................20200.0511000000
..........................................................................................................................................................................................................................................................................................A---AC---AAC---AACA---------GCAG---------------CAGCAGCA----------------GC---------------A---------................................................................................25200.0510000010
..................AG------CAAC---A---GC---AG---CAACAACAGC...................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000
........................................................................................................................................................................................................................................................................................................................AG---------------CAGCAGCA----------------GC---------------A---------ACAACAGCA-----------------GC....................................................24200.0511000000

Generated: 05/18/2015 at 02:25 AM