ID:

dmo_2241

 Coordinate:

scaffold_6541:2542337-2542487 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-5.0 -4.9 -4.8

Flybase annnotation

CDS [Dmoj\GI14157-cds]; exon [dmoj_GLEANR_14325:2]; intron [Dmoj\GI14157-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CGGGGCGGCGACCCCTGTGGCGGTGGACGAGATCGAGGTGGTGGCGCGTTGTACCCCGGCCGTAGTTATAACTTCTTTACAACGTATTACTAAAACAATAATACAACATATTATTGTACAAAATTCACTTAGTTAAATAGATTTCACCTTTTCTTTCAATATGCATAATAATTTATGCCACTTAGCCACGATTTAATATTAAAATTTCATTTTTATGTAACAGACCACTTTTTAGCTGCGTTCATTGCGCA
*********************************************************************.........................(((((((((.....))))))))).................................***************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V049
head
 V110
male body
...........................................................................GTTACAACGTATTACTGAA............................................................................................................................................................. 19 2 1 15.00 15 15 0 0 0
...........................................................................GTTACAACGTATTACTGAAGC........................................................................................................................................................... 21 3 3 3.67 11 11 0 0 0
...........................................................................GTTACAACGTATTACTGAAG............................................................................................................................................................ 20 3 6 1.50 9 9 0 0 0
.............................................................................TACAACGTATTACTGAAGC........................................................................................................................................................... 19 2 2 1.50 3 3 0 0 0
..................................................................................................................................................................................................................TTTTATGTAACAGACCACTTTTTAGC............... 26 0 1 1.00 1 1 0 0 0
..............................................................................................................................ACTTAGTTAAATAGATTTCACCTT..................................................................................................... 24 0 1 1.00 1 1 0 0 0
.....................................................................AACTTCTTTACAACGTATTACTAA.............................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0
........................................................................TTCTTTACAACGTATTACTAAAACAA......................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0
....................................................................................................................................................................................................................TTATGTAACAGACCACTTTTTAGC............... 24 0 1 1.00 1 0 1 0 0
.......................................................................CTTCTTTACAACGTATTACTAAAACAA......................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0
............................................................................................................TATTATTGTACAAAATTCACT.......................................................................................................................... 21 0 1 1.00 1 1 0 0 0
............................................................................................................................TCACTTAGTTAAATAGATTTCACCTTT.................................................................................................... 27 0 1 1.00 1 1 0 0 0
...............................................................................................................................................................................................................................ACCACTTTTTAGCTGCGTTCATTGCGC. 27 0 1 1.00 1 1 0 0 0
............................................................................................................................TCACTTAGTTAAATAGATTTCACCT...................................................................................................... 25 0 1 1.00 1 1 0 0 0
.......................................................................CTTCTTTACAACGTATTACTAAAACA.......................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0
...........................................................................................................................TTCACTTAGTTAAATAGATTTCACC....................................................................................................... 25 0 1 1.00 1 1 0 0 0
..........................................................................TGTTACAACGTATTACTGAA............................................................................................................................................................. 20 3 7 0.71 5 5 0 0 0
............................................................................TTACAACGTATTACTGAAG............................................................................................................................................................ 19 2 3 0.67 2 1 0 1 0
............................................................................TTACAACGTATTACTGAAGC........................................................................................................................................................... 20 2 2 0.50 1 1 0 0 0
...........................................................................GTTACAACGTATTACTGA.............................................................................................................................................................. 18 2 2 0.50 1 1 0 0 0
..........................................................................TGTTACAACGTATTACTGA.............................................................................................................................................................. 19 3 20 0.30 6 6 0 0 0
........................................CTGGCGCGTGGTACACCGGC............................................................................................................................................................................................... 20 3 6 0.17 1 0 0 1 0
......................GTGGACGAGATCGAGGTGGTGG............................................................................................................................................................................................................... 22 0 7 0.14 1 0 0 0 1
......................................................................................................................................................................................................................................ATTTGCTGCGTTGATTGCGCA 21 3 9 0.11 1 0 0 0 1
..........................ACGAGATCGAGGTGGTGGCG............................................................................................................................................................................................................. 20 0 12 0.08 1 0 0 0 1
...........................................................................GTTACAACGTATTACTGAG............................................................................................................................................................. 19 3 14 0.07 1 0 0 0 1

Anti-sense strand reads

GCCCCGCCGCTGGGGACACCGCCACCTGCTCTAGCTCCACCACCGCGCAACATGGGGCCGGCATCAATATTGAAGAAATGTTGCATAATGATTTTGTTATTATGTTGTATAATAACATGTTTTAAGTGAATCAATTTATCTAAAGTGGAAAAGAAAGTTATACGTATTATTAAATACGGTGAATCGGTGCTAAATTATAATTTTAAAGTAAAAATACATTGTCTGGTGAAAAATCGACGCAAGTAACGCGT
*****************************************************************************************************.........................(((((((((.....))))))))).................................********************************************************************* 		Read size # Mismatch Hit Count Total Norm Total V110
male body		 M046
female body
 M060
embryo
 V056
head
 V049
head
.............................................................................................................................................................................AAAGGGTGAATCGGTGCTA........................................................... 19 2 2 40.00 80 66 13 0 1 0
............................................................................................................................................................................GAAAGGGTGAATCGGTGCTA........................................................... 20 3 11 14.00 154 124 30 0 0 0
.............................................................................................................................................................................AAAGGGTGAATCGGTGCTAA.......................................................... 20 2 1 12.00 12 8 4 0 0 0
................................................................................................................................................................................GGGTGAATCGGTGCTAAATC....................................................... 20 2 1 12.00 12 8 4 0 0 0
...............................................................................................................................................................................AGGGTGAATCGGTGCTAAATC....................................................... 21 2 1 11.00 11 5 6 0 0 0
...........................................................................CAATGTTGCATAATGACTT............................................................................................................................................................. 19 2 1 11.00 11 2 8 0 1 0
.............................................................................................................................................................................AAAGGGTGAATCGGTGCT............................................................ 18 2 4 8.75 35 15 19 0 0 1
.............................................................................................................................................................................AAAGGGTGAATCGGTGCTAAATC....................................................... 23 3 1 8.00 8 8 0 0 0 0
...............................................................................................................................................................................AGGGTGAATCGGTGCTAAA......................................................... 19 1 1 7.00 7 3 3 0 1 0
...............................................................................................................................................................................AGGGTGAATCGGTGCTAA.......................................................... 18 1 1 6.00 6 2 3 0 1 0
.......................................................GGCCGGCATCAATATTGAAGAAATGT.......................................................................................................................................................................... 26 0 1 6.00 6 1 5 0 0 0
..............................................................................................................................................................................AAGGGTGAATCGGTGCTAAA......................................................... 20 2 1 6.00 6 3 3 0 0 0
..............................................................................................................................................................................AAGGGTGAATCGGTGCTA........................................................... 18 2 4 5.25 21 11 10 0 0 0
..............................................................................................................................................................................AAGGGTGAATCGGTGCTAA.......................................................... 19 2 1 5.00 5 5 0 0 0 0
..............................................................................................................................................................................AAGGGTGAATCGGTGCTAAATC....................................................... 22 3 1 5.00 5 4 1 0 0 0
........................................................GCCGGCATCAATATTGAAGAAATGT.......................................................................................................................................................................... 25 0 1 5.00 5 0 5 0 0 0
............................................................................................................................................................................GAAAGGGTGAATCGGTGCTAAAT........................................................ 23 3 1 5.00 5 4 1 0 0 0
............................................................................................................................................................................GAAAGGGTGAATCGGTGCTAAA......................................................... 22 3 3 4.67 14 8 6 0 0 0
................................................................................................................................................................................GGGTGAATCGGTGCTAAA......................................................... 18 1 2 4.50 9 3 6 0 0 0
......................................................GGGCCGGCATCAATATTGAAGAAATGT.......................................................................................................................................................................... 27 0 1 4.00 4 0 3 1 0 0
.................................................................................................................................................................................GGTGAATCGGTGCTAAATC....................................................... 19 1 1 4.00 4 1 3 0 0 0
.....................................................GGGGCCGGCATCAATATTGAAGAAATGT.......................................................................................................................................................................... 28 0 1 4.00 4 0 4 0 0 0
.....................................................GGGGCCGGCATCAATATTGAAGAAAT............................................................................................................................................................................ 26 0 1 4.00 4 0 3 1 0 0
............................................................................................................................................................................GAAAGGGTGAATCGGTGCTAA.......................................................... 21 3 5 3.80 19 12 7 0 0 0
...........................................................................CAATGTTGCATAATGACTTCG........................................................................................................................................................... 21 3 3 3.33 10 6 3 0 1 0
.............................................................................................................................................................................AAAGGGTGAATCGGTGCTAAAT........................................................ 22 2 1 3.00 3 2 1 0 0 0
.............................................................................ATGTTGCATAATGACTTCG........................................................................................................................................................... 19 2 2 3.00 6 2 4 0 0 0
...............................................................................................................................................................................AGGGTGAATCGGTGCTAAAT........................................................ 20 1 1 3.00 3 3 0 0 0 0
................................................................................................................................................................................GGGTGAATCGGTGCTAAAT........................................................ 19 1 1 3.00 3 3 0 0 0 0
.............................................................................................................................................................................AAAGGGTGAATCGGTGCTAAA......................................................... 21 2 1 3.00 3 2 1 0 0 0
...........................................................................CAATGTTGCATAATGACTTC............................................................................................................................................................ 20 3 6 2.17 13 6 7 0 0 0
.................................................................................................................................................................................GGTGAATCGGTGCTAAATCCC..................................................... 21 3 2 2.00 4 0 4 0 0 0
..............................................................................................................................................................................AAGGGTGAATCGGTGCTAAAT........................................................ 21 2 1 2.00 2 2 0 0 0 0
.........................................................CCGGCATCAATATTGAAGAAATGT.......................................................................................................................................................................... 24 0 1 2.00 2 0 1 1 0 0
.................................................................................................................................................................................GGTGAATCGGTGCTAAATCC...................................................... 20 2 2 1.50 3 1 2 0 0 0
.........................................................................................................TGTATAATAACATGTTTTAAGTGAA......................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0
............................................................................................................ATAATAACATGTTTTAAGTGAATCAATT................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0
......................................................GGGCCGGCATCAATATTGAAGAAATG........................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0
...............................................................................................................................................................................AGGGTGAATCGGTGCTAAATCC...................................................... 22 3 1 1.00 1 1 0 0 0 0
.....................................................GGGGCCGGCATCAATATTGAAGAAA............................................................................................................................................................................. 25 0 1 1.00 1 0 1 0 0 0
...........GGGGACACCGCCACCTGCTCTAGCT....................................................................................................................................................................................................................... 25 0 2 1.00 2 0 1 1 0 0
.....................................................GGGGCCGGCATCAATCTTGAAGAAAT............................................................................................................................................................................ 26 1 1 1.00 1 0 0 1 0 0
.....................................................GGGGCCGGCATCAATATTGAAGAAATG........................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0
..........................................................CGGCATCAATATTGAAGAAAT............................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0
.........................................................CCGGCATCAATATTGAAGAAAT............................................................................................................................................................................ 22 0 1 1.00 1 0 0 1 0 0
..........................................................CGGCATCAATATTGAAGAAATGT.......................................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0
.......................................................................GAAGAAATGTTGCATAATGATTTTGT.......................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0
...............................................................................................................ATAACATGTTTTAAGTGAATCAATT................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0
......................................................GGGCCGGCATCAATATTGAAGAAA............................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0
.....................................................GGGGCCGGCATCAATATTGAAGTAAT............................................................................................................................................................................ 26 1 1 1.00 1 0 0 1 0 0
.............................................................................................................................................................................AAATGGTGAATCGGTGCTA........................................................... 19 2 1 1.00 1 1 0 0 0 0
.......................................................GGCCGGCATCAATATTGAAGAAATGTCGA....................................................................................................................................................................... 29 2 1 1.00 1 0 1 0 0 0
..............................................................................................................................................................................TAGGGTGAATCGGTGCTA........................................................... 18 1 1 1.00 1 1 0 0 0 0
.......................................................GGCCGGCATCAATATTGAAGAAAT............................................................................................................................................................................ 24 0 1 1.00 1 0 1 0 0 0
..................................................................................................................................................................................GTGAATCGGTGCTAAATCCC..................................................... 20 3 4 0.75 3 0 3 0 0 0
..............................................................................TGTTGCATAATGACTTCG........................................................................................................................................................... 18 2 6 0.67 4 1 1 0 1 1
..................................................................................................................................................................................GTGAATCGGTGCTAAATCC...................................................... 19 2 3 0.67 2 0 2 0 0 0
..........................................................................ACAATGTTGCATAATGACTT............................................................................................................................................................. 20 3 7 0.57 4 1 2 0 0 1
................................................................................................................................................................................GGGTGAACCGGTGCTAAAT........................................................ 19 2 2 0.50 1 1 0 0 0 0
............................................................................AATGTTGCATAATGACTTCG........................................................................................................................................................... 20 2 2 0.50 1 1 0 0 0 0
....CGCCGCTGGGGACACCGCCACCTGCT............................................................................................................................................................................................................................. 26 0 2 0.50 1 0 1 0 0 0
...........GGGGACACCGCCACCTGCTCTAGCTCCA.................................................................................................................................................................................................................... 28 0 2 0.50 1 0 0 1 0 0
.............................................................................................................................................................................AAAGGGTGAATCGGTGCTACA......................................................... 21 3 2 0.50 1 0 0 0 0 1
.CCCCGCCGCTGGGGACACCGCCACCT................................................................................................................................................................................................................................ 26 0 2 0.50 1 0 0 1 0 0
...........GGGGACACCGCCACCTGCTCTTGCT....................................................................................................................................................................................................................... 25 1 2 0.50 1 0 0 1 0 0
..........TGGGGACACCGCCACCTGCTCTAGCT....................................................................................................................................................................................................................... 26 0 2 0.50 1 0 0 1 0 0
.............................................................................................................................................................................AAGGGGTGAATCGGTGCTAAAT........................................................ 22 3 2 0.50 1 1 0 0 0 0
................................................................................................................................................................................GGGTGAATCGGTGCTAAATCC...................................................... 21 3 3 0.33 1 0 1 0 0 0
.............................................................................................................................................................................AGAGGGTGAATCGGTGCTA........................................................... 19 2 3 0.33 1 0 0 0 0 1
............................................................................AATGTTGCATAATGACTTC............................................................................................................................................................ 19 2 3 0.33 1 0 1 0 0 0
...................................TCTACCACCGCGCAACAG...................................................................................................................................................................................................... 18 2 9 0.11 1 0 1 0 0 0
............................................................................................................................................................................GAAATGGTGAATCGGTGCTA........................................................... 20 3 10 0.10 1 1 0 0 0 0
............................................................................................................................................................................TAAAGGGTGAATCGGTGCT............................................................ 19 3 20 0.10 2 2 0 0 0 0
................................................................................................................................................................................TGGTGAATCGGTGCTAAA......................................................... 18 1 20 0.05 1 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6541:2542287-2542537 - dmo_2241 CGGGGCGGCGACCCCTGTGGCGGTGGACGAGATCGAGGTGGTGGCGCGTTGTACCCCGGCCGTAGTTATAACTTCTTTACAACGTA------TTAC--------TAAAACAATAATACAACATATTATTGTACAAAATTCACTTAGTTAAATAGATTTCACCTTTTCTTTCAATATGCATAATAATTTATGCCACTTAGCCACGATTTAATATTAAAATTTCATTTTTA-TGTAACAGACCACTTTTTAGCTGCGTTCATTGCGCA
droVir3 scaffold_12875:16485321-16485366 + GGCGGCGGCGGCGGCGGTGGCGGCAATGGAGGTGGAGGTGGTGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CG
droGri2 scaffold_15252:15730559-15730652 - ACAAAA--------------------------------------------------------------------------------------------------------TAAAATGAAAAGAATGA-AATATGAAAATGA---------------------------------------------------TAAACAAATTTCACTTGAC----TGAATGAATTT------------TACCTTTTTAAATTTTGTATACTAACTT
droWil2 scf2_1100000004585:6653-6813 + TA--------------------------------------------------------------------------------------------------------AAACATTAGGTCAATATAATTTTACACAAAAATCT-TTAAATATATACTATTAACCTTTTTTTTCAATATTCATTATTAAATTTGGCGGTTTAGCGCAATTATATATTAAATATTAATTTTTTCCCTCAGATCTAACTTTTAAGCTCCGTTCACTGCACA
dp5 Unknown_group_670:20770-20853 - AAAATA----GT-------------------------------------------------------------------------A------CTAA--------AAAAAAAATTTTAAAAAAAATCGTATTAAAAAATATATTAA--------------------------------------------------------------------TTTAAATAAATTT----------AATTAATTTTTAGAAT-------------A
droPer2 scaffold_0:3968155-3968165 + TT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTGTGTT
droAna3 scaffold_13111:295019-295206 + ACAACT----TTTTCATTATC-TT-------------------------------------------------------------A---ATTCTAT--------GTACACAATAACACGACACATATTGACATAAAAATTACTCCGTTTTATAGTACATGCCTTTATTTTCATAATTCATTTTATTTGATTATGATTGACCACGATTTACTATTTTAATTAAATTTTTT-CGAAGGAGCTAATTTTTAAGCTGCGTTCACTGCAAC
droBip1 scf7180000393546:5809-5969 + TA--------------------------------------------------------------------------------------------------------AAACAATAACACAACACATAATGACATAAAAATTACTCAGTTTTGTAGTACATGCCTTTATTTTCATAATTCATTTTATTGGATGACGATTAGACCCGATTTAATATTTTAATTAAATTTTTT-TGTTAGAGCTAATTTTCAAGCTGAGCTCACTGCAAC
droKik1 scf7180000301691:7556-7756 + GTGAAA----AG------------------------------------------------------------TTTTTTGCACCGAATTAACCTTACCCCCCCCTTAAAACAAAAACACGACATATTATGACATAAAAATTATTCACTCTTATCGTAAATACCTTCATTTTCAAAATTTATTTTATTTGATAAAGATTGGACGCGATTTTATATAGAAATTTTATTTGTC-TATGCAGGCTAATTTTTAAGCTGCATTCACTGCTAC
droFic1 scf7180000452473:6586-6746 + TA--------------------------------------------------------------------------------------------------------AAACAATAACACAACACATAATGACATAAAAATTACTTAGTTTTATAGTACATGCCTTTATTTTCGAAATTCATTTTATTTGATGATGATCGGACTCGATTTAATATTTAAATAAAATGTTTT-TGTATGAGCTAATTTTCAAGCTGCGTTCACTGCAAC
droEle1 scf7180000490982:874251-874266 + C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACGTTGAATACCCA
droRho1 scf7180000777462:3596-3752 + TA--------------------------------------------------------------------------------------------------------AAACAATAACACAACACATAATGACATAAAAATTACTCAGTTTTATAGTACATACCTTTATTTTCAATATTCATTTTATATGCCGACGATTGTACGCGATTTAGTAGTATAAATTAATTTTTT-AGTGGAAGCTAATTTTCGAGCTGCGTTCGGTG----
droBia1 scf7180000302425:47507-47676 + ACAACA----CT-------------------------------------------------------------------------A------ATTT--------TAAAACAATAACACAAAACATAGTGACATAAAAATTACTTAGTTTTAAAGGAGATACCATTATTTTCAATATTCATTTTATTTGACGACGAGTGGACGCGATTTAATTGTAGAAATAAATTTTCT-TGTGGAAGCTAATTTTTAAGCTACGTTTGCG----C
droTak1 scf7180000410415:2964-3137 - TAAAAA----AT-------------------------------------------------------------------------A------ATTT--------TAAAACAATAACACAACACATAATGACATAAAAATTACTCAGTTTTAGAGTACATACCTTTACTTTCAATATGCATTTTATATGCCGATGATTGGACGCGATTTAGTTATAGAAATTAATTTTTT-ATTGGAAGCTTATTTTGTGGCTGCGTTCTCTGTGAC
dm3 chr2R:20439971-20440028 + GTGGAG----GCACCAGTGGCACTAGTGCAGATGGAGGTGGTGG-----------------------------------------------------------------------------------------------T-------------------------------------------------------------------------------------------------------------GCCACACATCCCAGTCG
droYak3 v2_chr2L_random_002:49994-50136 + A---------------------------------------------------------------------------------------------------------AAACATTATCACAACACATAATGA-ATAAGAAATACTCCGTTTTCTAGTGCATACCTTTATTTTCAATATTTATTTTATTTTACGATAACTAGACACGATTTAATATTAAAATTTATTTT-----------------TTTTAGGTTGCGTTCACTGTTTT
droEre2 scaffold_4929:1324280-1324304 + AT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATGCCATTTACCCACGATTTA---------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
CGGGGCGGCGACCCCTGTGGCGGTGGACGAGATCGAGGTGGTGGCGCGTTGTACCCCGGCCGTAGTTATAACTTCTTTACAACGTA------TTAC--------TAAAACAATAATACAACATATTATTGTACAAAATTCACTTAGTTAAATAGATTTCACCTTTTCTTTCAATATGCATAATAATTTATGCCACTTAGCCACGATTTAATATTAAAATTTCATTTTTA-TGTAACAGACCACTTTTTAGCTGCGTTCATTGCGCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................................................................................................................................................................................................................................TTTTA-TGTAACAGACCACTTTTTAGC...............2611.001100000
............................................................................................................................................ACTTAGTTAAATAGATTTCACCTT......................................................................................................2411.001100000
.....................................................................AACTTCTTTACAACGTA------TTAC--------TAA...............................................................................................................................................................2411.001100000
........................................................................TTCTTTACAACGTA------TTAC--------TAAAACAA..........................................................................................................................................................2611.001100000
..................................................................................................................................................................................................................................TTA-TGTAACAGACCACTTTTTAGC...............2411.001000010
.......................................................................CTTCTTTACAACGTA------TTAC--------TAAAACAA..........................................................................................................................................................2711.001100000
..........................................................................................................................TATTATTGTACAAAATTCACT...........................................................................................................................2111.001100000
..........................................................................................................................................TCACTTAGTTAAATAGATTTCACCTTT.....................................................................................................2711.001100000
..............................................................................................................................................................................................................................................ACCACTTTTTAGCTGCGTTCATTGCGC.2711.001100000
..........................................................................................................................................TCACTTAGTTAAATAGATTTCACCT.......................................................................................................2511.001100000
.......................................................................CTTCTTTACAACGTA------TTAC--------TAAAACA...........................................................................................................................................................2611.001100000
.........................................................................................................................................TTCACTTAGTTAAATAGATTTCACC........................................................................................................2511.001100000
......................GTGGACGAGATCGAGGTGGTGG..............................................................................................................................................................................................................................2270.141000001
..........................ACGAGATCGAGGTGGTGGCG............................................................................................................................................................................................................................20120.081000001
droVir3
GGCGGCGGCGGCGGCGGTGGCGGCAATGGAGGTGGAGGTGGTGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................GGCAATGGAGGTGGAGGT...................................................................................................................................................................................................................................1811.001000000000000000000000000000000000010000000000000000000000000000
.....................GGCAATGGAGGTGGAGGTGGC................................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
........................AATGGAGGTGGAGGTGGT................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000010
GGCGGCGGCGGCGGCGGTGGC.....................................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
.GCGGCGGCGGCGGCGGTG.......................................................................................................................................................................................................................................................18200.051001000000000000000000000000000000000000000000000000000000000000
droGri2
ACAAAA--------------------------------------------------------------------------------------------------------TAAAATGAAAAGAATGA-AATATGAAAATGA---------------------------------------------------TAAACAAATTTCACTTGAC----TGAATGAATTT------------TACCTTTTTAAATTTTGTATACTAACTTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
TA--------------------------------------------------------------------------------------------------------AAACATTAGGTCAATATAATTTTACACAAAAATCT-TTAAATATATACTATTAACCTTTTTTTTCAATATTCATTATTAAATTTGGCGGTTTAGCGCAATTATATATTAAATATTAATTTTTTCCCTCAGATCTAACTTTTAAGCTCCGTTCACTGCACASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................................................................................................................................................................................................................................TCCCTCAGATCTAACTTTTAAGCTCCGT..........285105.80529113483815
....................................................................................................................................................................................................................................TCCCTCAGATCTAACTTTTAAGCTCCG...........27516.2081077040
.............................................................................................................................................................................TATTCATTATTAAATTTGGCGGTT.....................................................................2438.0024020040
.......................................................................................................................................................................TTTCAATATTCATTATTAAATTTGGCGG.......................................................................2837.3322017050
.....................................................................................................................................................................................................................................CCCTCAGATCTAACTTTTAAGCTCCGT..........2753.4017013040
.............................................................................................................................................................................TATTCATTATTAAATTTGGCGGTTTAG..................................................................2733.331009100
....................................................................................................................................................................................................................................TCCCTCAGATCTAACTTTTAAGCTCC............2653.0015011040
........................................................................................................................................................................TTCAATATTCATTATTAAATTTGGCGG.......................................................................2733.00907020
...................................................................................................................................................................................................................................TTCCCTCAGATCTAACTTTTAAGCTCCGT..........2943.0012011010
........................................................................................................................................................................................................................................TCAGATCTAACTTTTAAGCTCCGT..........2462.831709080
....................................................................................................................................................................................................................................TCCCTCAGATCTAACTTTTAAGCTC.............2552.401228020
...............................................................................................................................................................................................................................................TAACTTTTAAGCTCCGTTCACTGCAC.2662.0012012000
.......................................................................................................................................................................................................................................CTCAGATCTAACTTTTAAGCTCCGT..........2552.001003070
....................................................................................................................................................................................................................................TCCCTCAGATCTAACTTTTAAGCTCCGTT.........2951.80907020
.......................................................................................................................................................................TTTCAATATTCATTATTAAATTTGGCG........................................................................2731.67504010
....................................................................................................................................................................................TATTAAATTTGGCGGTTTAGCGCAAT............................................................2631.67505000
.....................................................................................................................................................................................................................................CCCTCAGATCTAACTTTTAAGCTCCG...........2651.60808000
...................................................................................................................................................................................................................................TTCCCTCAGATCTAACTTTTAAGCTCCG...........2841.50605010
........................................................................................................................................................................TTCAATATTCATTATTAAATTTGGCGGT......................................................................2831.33403010
...............................................................................................................................................................................TTCATTATTAAATTTGGCGGTTTAG..................................................................2531.33404000
...............................................................................................................................................................................................................................................TAACTTTTAAGCTCCGTTCACTGCA..2561.33807010
................................................................................................................................................................................TCATTATTAAATTTGGCGGTTTAGC.................................................................2531.00302010
.........................................................................................................................................................................TCAATATTCATTATTAAATTTGGCGGTT.....................................................................2831.00303000
..............................................................................................................................................................................ATTCATTATTAAATTTGGCGGTT.....................................................................2331.00303000
.........................................................................................................................................................................TCAATATTCATTATTAAATTTGGCGG.......................................................................2631.00303000
...............................................................................................................................................................................................................................................TAACTTTTAAGCTCCGTTCACTGCACA2761.00604020
.............................................................................................................................................................................................................................................TCTAACTTTTAAGCTCCGTTCACTG....2561.00602040
................................................................................................................TAGGTCAATATAATTTTACACAAAAATCT-............................................................................................................................2960.83505000
.........................................................................................................................................................................................................................................CAGATCTAACTTTTAAGCTCCGTTCAC......2760.83505000
......................................................................................................................................................................................................................................CCTCAGATCTAACTTTTAAGCTCCGT..........2650.80400040
....................................................................................................................................................................................................................................TCCCTCAGATCTAACTTTTAAGCT..............2450.80401030
..............................................................................................................................................................................ATTCATTATTAAATTTGGCGG.......................................................................2130.67202000
.........................................................................................................................................................................................................................................CAGATCTAACTTTTAAGCTCCGT..........2360.67401030
...............................................................................................................................................................................TTCATTATTAAATTTGGCGGTTTAGC.................................................................2630.67202000
.............................................................................................................................................................................TATTCATTATTAAATTTGGCGG.......................................................................2230.67202000
........................................................................................................................................................................TTCAATATTCATTATTAAATTTGGCGGTT.....................................................................2930.67202000
TA--------------------------------------------------------------------------------------------------------AAACATTAGGTCAATATAATTTTACA......................................................................................................................................2860.67404000
..........................................................................................................................................................................CAATATTCATTATTAAATTTGGCGG.......................................................................2530.67202000
........................................................................................................................................................................................................................................TCAGATCTAACTTTTAAGCTCCGTTCAC......2860.67404000
....................................................................................................................................................................................................................................TCCCTCAGATCTAACTTTTAAGC...............2350.60302010
........................................................................................................................................................................................................................................TCAGATCTAACTTTTAAGCTCCGTT.........2560.50300120
.....................................................................................................................................................................................................TAGCGCAATTATATATTAAATATTA............................................2560.50300030
...................................................................................................................................................................................................................................TTCCCTCAGATCTAACTTTTAAGCTC.............2640.50202000
.................................................................................................................................................................................................................................TTTTCCCTCAGATCTAACTTTTAAGC...............2640.50201010
.....................................................................................................................................................................................................TAGCGCAATTATATATTAAATATTAATT.........................................2840.50201010
.....................................................................................................................................................................................................TAGCGCAATTATATATTAAATATTAAT..........................................2750.40200020
.............................................................................................................................................................................TATTCATTATTAAATTTGGCGGT......................................................................2330.33101000
................................................................................................................................................................................TCATTATTAAATTTGGCGGTTTAGCGC...............................................................2730.33100010
.......................................................................................................................................................................TTTCAATATTCATTATTAAATTTGG..........................................................................2530.33101000
......................................................................................................................................................................................................................AAATATTAATTTTTTCCCTCAGATC...........................2530.33101000
........................................................................................................................................................................................................................ATATTAATTTTTTCCCTCAGATCTA.........................2530.33100010
......................................................................................................................................................................TTTTCAATATTCATTATTAAATTTGGCG........................................................................2830.33101000
TA--------------------------------------------------------------------------------------------------------AAACATTAGGTCAATATAATTTTAC.......................................................................................................................................2760.33201010
.............................................................................................................................................................................TATTCATTATTAAATTTGGCGGTTTA...................................................................2630.33101000
.....................................................................................................................................................................................ATTAAATTTGGCGGTTTAGCGCAA.............................................................2430.33101000
...............................................................................................................................................................................TTCATTATTAAATTTGGCGGTT.....................................................................2230.33101000
...................................................................................................................................................................................................................ATTAAATATTAATTTTTTCCCTCA...............................2430.33101000
.................................................................................................................................................................................CATTATTAAATTTGGCGGTT.....................................................................2030.33101000
...........................................................................................................................................................................................TTTGGCGGTTTAGCGCAATTATATAT.....................................................2630.33101000
................................................................................................................................................................................TCATTATTAAATTTGGCGGTTTAGCG................................................................2630.33100010
..........................................................................................................................................................................CAATATTCATTATTAAATTTGGCGGT......................................................................2630.33101000
.............................................................................................................................................................................TATTCATTATTAAATTTGGCGGTTT....................................................................2530.33101000
.........................................................................................................................................................................TCAATATTCATTATTAAATTTGGCGGT......................................................................2730.33100010
........................................................................................................................................................................TTCAATATTCATTATTAAATTTGGCG........................................................................2640.25101000
............................................................................................................................................................TTAACCTTTTTTTTCAATATTCATTAT...................................................................................2740.25101000
..............................................................................................................................................................................ATTCATTATTAAATTTGGCG........................................................................2040.25101000
..................................................................................................................................................................................................................................TTTCCCTCAGATCTAACTTTTAAGC...............2540.25101000
...............................................................................................................................................TAAATATATACTATTAACCTTTTTTT.................................................................................................2640.25101000
....................................................................................................................................................ATATACTATTAACCTTTTTTTTCAATA...........................................................................................2740.25101000
.............................................................................................................................................................TAACCTTTTTTTTCAATATTCATTAT...................................................................................2640.25101000
...................................................................................................................................................................................................................................TTCCCTCAGATCTAACTTTTAAGCTCC............2740.25101000
...................................................................................................................................................................................................................................TTCCCTCAGATCTAACTTTTAAGC...............2440.25101000
...................................................................................................................................................TATATACTATTAACCTTTTTTTTCAATA...........................................................................................2840.25101000
.................................................................................................................................................................................................................................TTTTCCCTCAGATCTAACTTTTAAG................2540.25100010
.......................................................................................................................................................................................................................................CTCAGATCTAACTTTTAAGCTCCG...........2450.20101000
......................................................................................................................................................................................................AGCGCAATTATATATTAAATATTAAT..........................................2650.20101000
.........................................................................................................................................ATCT-TTAAATATATACTATTAACCTT......................................................................................................2650.20100010
....................................................................................................................................................................................................................................TCCCTCAGATCTAACTTTTAAGCTCCGG..........2850.20100010
.......................................................................................................................................................................................................................................CTCAGATCTAACTTTTAAGCTCCGTT.........2650.20100010
.....................................................................................................................................................................................................................................CCCTCAGATCTAACTTTTAAGCT..............2350.20101000
.A--------------------------------------------------------------------------------------------------------AAACATTAGGTCAATATAATTT..........................................................................................................................................2360.17101000
............................................................................................................................................................................................................................................ATCTAACTTTTAAGCTCCGTTCAC......2460.17101000
............................................................................................................................................................................................................................................ATCTAACTTTTAAGCTCCGTTCACT.....2560.17101000
.A--------------------------------------------------------------------------------------------------------AAACATTAGGTCAATATAATTTTACA......................................................................................................................................2760.17101000
................................................................................................................................................................................................................................................AACTTTTAAGCTCCGTTCACTGCAC.2560.17101000
...............................................................................................................................................................................................................................................TAACTTTTAAGCTCCGTTCACTGC...2460.17101000
................................................................................................................................................................................................................................................AACTTTTAAGCTCCGTTCACTGCA..2460.17101000
TA--------------------------------------------------------------------------------------------------------AAACATTAGGTCAATATAATTT..........................................................................................................................................2460.17101000
........................................................................................................................................................................................................................................TCAGATCTAACTTTTAAGCTCCGTTCA.......2760.17100010
.........................................................................................................................................................................................................................................CAGATCTAACTTTTAAGCTCCGTT.........2460.17101000
.................................................................................................................AGGTCAATATAATTTTACACAAAAATCT-............................................................................................................................2860.17101000
...........................................................................................................................................................................................................................................GATCTAACTTTTAAGCTCCGTTCAC......2560.17100010
....................................................................................................................TCAATATAATTTTACACAAAAATCT-TT..........................................................................................................................2760.17101000
..................................................................................................................GGTCAATATAATTTTACACAAAAATC..............................................................................................................................2660.17101000
.........................................................................................................................................................................................................................................CAGATCTAACTTTTAAGCTCCG...........2260.17101000
..............................................................................................................................................................................................................................................CTAACTTTTAAGCTCCGT..........1860.17101000
.....................................................................................................................................................................................................TAGCGCAATTATATATTAAATATTAA...........................................2660.17100010
...........................................................................................................................................................................................................................................GATCTAACTTTTAAGCTCCGTTCACT.....2660.17101000
........................................................................................................................................................................................................................................TCAGATCTAACTTTTAAGCTCC............2260.17101000
...........................................................................................................................................................................................................................................GATCTAACTTTTAAGCTCCGT..........2160.17101000
..........................................................................................................................................................................................................................................AGATCTAACTTTTAAGCTCCGTTCAC......2660.17101000
.............................................................................................................................TTTTACACAAAAATCT-TTAAATATATAC................................................................................................................2860.17101000
.............................................................................................................................................................................................................................................TCTAACTTTTAAGCTCCGTTCACTGC...2660.17101000
dp5
AAAATA----GT-------------------------------------------------------------------------A------CTAA--------AAAAAAAATTTTAAAAAAAATCGTATTAAAAAATATATTAA--------------------------------------------------------------------TTTAAATAAATTT----------AATTAATTTTTAGAAT-------------ASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
TT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTGTGTTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
ACAACT----TTTTCATTATC-TT-------------------------------------------------------------A---ATTCTAT--------GTACACAATAACACGACACATATTGACATAAAAATTACTCCGTTTTATAGTACATGCCTTTATTTTCATAATTCATTTTATTTGATTATGATTGACCACGATTTACTATTTTAATTAAATTTTTT-CGAAGGAGCTAATTTTTAAGCTGCGTTCACTGCAACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................................................................................................................................TTATTTGATTATGATTGACCACGATT...........................................................26105.10517431000
...................................................................................................................................................................................TTTTATTTGATTATGATTGACCACGATT...........................................................28104.50459351000
......................................................................................................................................................................................TATTTGATTATGATTGACCACGATT...........................................................25103.703710242010
..................................................................................................................................................................................................................................TTT-CGAAGGAGCTAATTTTTAAGCTGC............27113.27368253000
..................................................................................................................................................................................................................................TTT-CGAAGGAGCTAATTTTTAAGC...............24112.55283232000
.................................................................................................................................................................................................................................TTTT-CGAAGGAGCTAATTTTTAAGC...............25112.18245190000
...................................................................................................................................................................................................................................TT-CGAAGGAGCTAATTTTTAAGCTGC............26111.45165101000
...................................................................................................................................................................................TTTTATTTGATTATGATTGACCACGAT............................................................27101.3013371011
................................................................................................................................................................................................................................TTTTT-CGAAGGAGCTAATTTTTAAGC...............26111.27143110000
...................................................................................................................................................................................................................................TT-CGAAGGAGCTAATTTTTAAGCTGCG...........27111.18131120000
..................................................................................................................................................................................................................................TTT-CGAAGGAGCTAATTTTTAAGCTGCG...........28111.09121020000
...............................................................................................................................................................................TTCATTTTATTTGATTATGATTGACC.................................................................26121.08130130000
...............................................................................................................................................................................................................................................TAATTTTTAAGCTGCGTTCACTGC...24130.9212471000
...............................................................................................................................................................................................................................................TAATTTTTAAGCTGCGTTCACTGCAAC27110.829450000
..................................................................................................................................................................................................................................TTT-CGAAGGAGCTAATTTTTAAGCT..............25110.647016000
...................................................................................................................................................................................TTTTATTTGATTATGATTGACCACGA.............................................................26100.606330000
..................................................................................................................................................................................................................TATTTTAATTAAATTTTTT-CGAAGGAGC...........................28110.556050010
.....................................................................................................................................................................................TTATTTGATTATGATTGACCACGATC...........................................................26100.505050000
.....................................................................................................................................................TATAGTACATGCCTTTATTTTCATAA...........................................................................................26100.505410000
...................................................................................................................................................................................TTTTATTTGATTATGATTGACCAC...............................................................24120.506060000
..........................................................................................................................................TTACTCCGTTTTATAGTACATGCCT.......................................................................................................25120.425050000
....................................................................................................................................................................................TTTATTTGATTATGATTGACCACGATT...........................................................27100.404130000
.....................................................................................................................................................................................TTATTTGATTATGATTGACCACGAT............................................................25100.404040000
..............................................................................................................AATAACACGACACATATTGACATA....................................................................................................................................2450.402200000
...................................................................................................................................................................................TTTTATTTGATTATGATTGACCACGATC...........................................................28100.404040000
.....................................................................................................................................................TATAGTACATGCCTTTATTTTCATAATT.........................................................................................28100.404040000
..................................................................................................................................................................................................................................TTT-CGAAGGAGCTAATTTTTAAGCTGCGT..........29110.364310000
.................................................................................................................................................................................................GATTGACCACGATTTACTATTTTAATT..............................................27110.364130000
..................................................................................................................................................................................................................................TTT-CGAAGGAGCTAATTTTTAAGCTG.............26110.364220000
..................................................................................................................................................................................................................................TTT-CGAAGGAGCTAATTTTTAAG................23110.364310000
..........................................................................................................................................TTACTCCGTTTTATAGTACATGCCTT......................................................................................................26120.334130000
.........................................................................................................................................................................................TTGATTATGATTGACCACGATTTACT.......................................................26100.303210000
......................................................................................................................................................................................TATTTGATTATGATTGACCACGATC...........................................................25100.303030000
.........................................................................................................................................................................................TTGATTATGATTGACCACGATTTACTA......................................................27100.303030000
...............................................................................................................................................................................................................................TTTTTT-CGAAGGAGCTAATTTTTAAGC...............27110.273030000
...................................................................................................................................................................................................................................TT-CGAAGGAGCTAATTTTTAAGCTGCGT..........28110.273111000
....................................................................................................................................................................................................................................T-CGAAGGAGCTAATTTTTAAGCTGCGTT.........28110.273120000
....................................................................................................................................................................................................................................T-CGAAGGAGCTAATTTTTAAGCTGC............25110.273030000
...............................................................................................................................................................................TTCATTTTATTTGATTATGATTGAC..................................................................25120.253030000
...............................................................................................................................................................................TTCATTTTATTTGATTATGATTGACCAC...............................................................28120.253030000
.........................................................................................................................................................................................TTGATTATGATTGACCACGATTTAC........................................................25100.202020000
.......................................................................................................................................................TAGTACATGCCTTTATTTTCATAATT.........................................................................................26100.202020000
.............................................................................................................CAATAACACGACACATATTGACATA....................................................................................................................................2550.201010000
.....................................................................................................................................................TATAGTACATGCCTTTATTTTCATA............................................................................................25100.202020000
........................................................................................................................................................................................TTTGATTATGATTGACCACGATTTACT.......................................................27100.202110000
....................................................................................................................................................................................................TGACCACGATTTACTATTTTAATTAAAT..........................................28110.182020000
.................................................................................................................................................................................................................................TTTT-CGAAGGAGCTAATTTTTAAGCT..............26110.182001001
.......................................................................................................................................................................................................CCACGATTTACTATTTTAATTAAAT..........................................25110.182020000
.............................................................................................................................................................................................TTATGATTGACCACGATTTACTATTT...................................................26110.182110000
.............................................................................................................................................................................................TTATGATTGACCACGATTTACTATTTT..................................................27110.182020000
...................................................................................................................................................................................................................................TT-CGAAGGAGCTAATTTTTAAGCTGCGTC.........29110.182020000
...................................................................................................................................................................................................................................TT-CGAAGGAGCTAATTTTTAAGCTGCGTT.........29110.182110000
........................................................................................................................................AATTACTCCGTTTTATAGTACATGCC........................................................................................................26120.172020000
.....................................................................................................................................................................................TTATTTGATTATGATTGACC.................................................................20120.172020000
.................................................................................................................................................................................CATTTTATTTGATTATGATTGACCA................................................................25120.172200000
...................................................................................................................................................................................TTTTATTTGATTATGATTGACC.................................................................22120.172020000
.................................................................................................................................................................................CATTTTATTTGATTATGATTGACCAC...............................................................26120.172020000
................................................................................................................................................................................TCATTTTATTTGATTATGATTGACC.................................................................25120.172020000
.......................................................................................................................................AAATTACTCCGTTTTATAGTACATGCC........................................................................................................27120.172020000
.................................................................................................................................................................................................................................................ATTTTTAAGCTGCGTTCACTG....21130.152001001
.......................................................................................................................................................TAGTACATGCCTTTATTTTCATAATTC........................................................................................27100.101010000
....................................................................................................................................................................................TTTATTTGATTATGATTGACCACGAC............................................................26100.101010000
...........................................................................................................................................................................................GATTATGATTGACCACGATTTACTAT.....................................................26100.101100000
........................................................................................................................................................................................TTTGATTATGATTGACCACGATTTACTA......................................................28100.101100000
..........................................................................................................................................................TACATGCCTTTATTTTCATAATTCAT......................................................................................26100.101010000
....................................................................................................................................................................................TTTATTTGATTATGATTGACCACGA.............................................................25100.101100000
.........................................................................................................................................................................................TTGATTATGATTGACCACGATC...........................................................22100.101010000
..........................................................................................................................................................................................TGATTATGATTGACCACGATTTACTA......................................................26100.101100000
........................................................................................................................................................................................TTTGATTATGATTGACCACGATTTAC........................................................26100.101010000
.....................................................................................................................................................TATAGTACATGCCTTTATTTTCATAATC.........................................................................................28100.101010000
......................................................................................................................................................................................TATTTGATTATGATTGACCACGATTT..........................................................26100.101100000
.....................................................................................................................................................TATAGTACATGCCTTTATTTTCATAAT..........................................................................................27100.101010000
..............................................................................................................................................TCCGTTTTATAGTACATGCCTTTATT..................................................................................................26100.101100000
......................................................................................................................................................ATAGTACATGCCTTTATTTTCATAA...........................................................................................25100.101010000
.................................................................................................................................................................................CATTTTATTTGATTATGATTGACCACGA.............................................................28100.101010000
....................................................................................................................................................TTATAGTACATGCCTTTATTTTCATA............................................................................................26100.101010000
....................................................................................................................................................TTATAGTACATGCCTTTATTTTCATAA...........................................................................................27100.101100000
...................................................................................................................................................................................TTTTATTTGATTATGATTGACCACGAC............................................................27100.101010000
.........................................................................................................................................................................................TTGATTATGATTGACCACGAT............................................................21100.101010000
........................................................................................................................................................................................TTTGATTATGATTGACCACGA.............................................................21100.101100000
......................................................................................................................................................ATAGTACATGCCTTTATTTTCATAATT.........................................................................................27100.101010000
......................................................................................................................................................................................TATTTGATTATGATTGACCACGAT............................................................24100.101010000
.......................................................................................................................................................TAGTACATGCCTTTATTTTCATAA...........................................................................................24100.101010000
.................................................................................................................................................................................................GATTGACCACGATTTACTATT....................................................21110.091010000
...................................................................................................................................................................................................................................TT-CGAAGGAGCTAATTTTTAAGCTGCT...........27110.091010000
.............................................................................................................................................................................................TTATGATTGACCACGATTTACTATT....................................................25110.091010000
.................................................................................................................................................................................................GATTGACCACGATTTACTATTTTAAT...............................................26110.091100000
........................................................................................................................................................................................................................AATTAAATTTTTT-CGAAGGAGCTAAT.......................26110.091010000
....................................................................................................................................................................................................TGACCACGATTTACTATTTTAATTAAATT.........................................29110.091010000
.................................................................................................................................................................................................GATTGACCACGATTTACTAT.....................................................20110.091100000
....................................................................................................................................................................................................................TTTTAATTAAATTTTTT-CGAAGGAGC...........................26110.091010000
................................................................................................................................................................................................TGATTGACCACGATTTACTAT.....................................................21110.091100000
.....................................................................................................................................................................................................GACCACGATTTACTATTTTAATTAAAT..........................................27110.091010000
.......................................................................................................................................................................................................................TAATTAAATTTTTT-CGAAGGAGC...........................23110.091010000
..................................................................................................................................................................................................................................TTT-CGAAGGAGCTAATTTTTAAGCTGCGA..........29110.091010000
...................................................................................................................................................................................................................................TT-CGAAGGAGCTAATTTTTAAGCT..............24110.091010000
........................................................................................................................................................................................................CACGATTTACTATTTTAATTAAATTT........................................26110.091010000
.......................................................................................................................................................................................................................................GAAGGAGCTAATTTTTAAGCTGCGTT.........26110.091001000
...................................................................................................................................................................................................................................................TTTTAAGCTGCGTTCACTGCAAC23110.091010000
......................................................................................................................................................................................................................TTAATTAAATTTTTT-CGAAGGAGCTAAT.......................28110.091010000
....................................................................................................................................................................................................TGACCACGATTTACTATTTTAATTA.............................................25110.091010000
.................................................................................................................................................................................................GATTGACCACGATTTACTATTTTAATC..............................................27110.091010000
..................................................................................................................................................................................................................TATTTTAATTAAATTTTTT-CGAAGGAGCT..........................29110.091010000
...............................................................................................................................................................................................................TACTATTTTAATTAAATTTTTT-CGAAG...............................27110.091010000
.......................................................................................................................................................................................................................TAATTAAATTTTTT-CGAAGGAGCTAAT.......................27110.091010000
..........................................................................................................................................................................................................................TTAAATTTTTT-CGAAGGAGCT..........................21110.091010000
................................................................................................................................................................................................TGATTGACCACGATTTACTATTTTAATT..............................................28110.091010000
.................................................................................................................................................................................................GATTGACCACGATTTACTATTTT..................................................23110.091010000
.................................................................................................................................................................................................................................TTTT-CGAAGGAGCTAATTTTTAAG................24110.091010000
...........................................................................................................................................................................................................................TAAATTTTTT-CGAAGGAGCTAATT......................24110.091010000
.............................................................................................................................................................................................TTATGATTGACCACGATT...........................................................18110.091010000
.......................................................................................................................................................................................................................TAATTAAATTTTTT-CGAAGGAGCTAA........................26110.091100000
................................................................................................................................................................................................TGATTGACCACGATTTACTATTTTAAT...............................................27110.091010000
..............................................................................................................................................................................................TATGATTGACCACGATTTACTATTTTAA................................................28110.091100000
...........................................................................................................................................................................................................................TAAATTTTTT-CGAAGGAGCTAATTTT....................26110.091010000
....................................................................................................................................................................................................TGACCACGATTTACTATTTTAATTAAA...........................................27110.091010000
.........................................................................................................................................................................................................................ATTAAATTTTTT-CGAAGG..............................18110.091010000
......................................................................................................................................................................................................................TTAATTAAATTTTTT-CGAAGGAGCT..........................25110.091010000
...................................................................................................................................................................................................................................TT-CGAAGGAGCTAATTTTTAAGC...............23110.091010000
...........................................................................................................................................................................................................................TAAATTTTTT-CGAAGGAGCTAATTTTT...................27110.091000010
...........................................................................................................................................TACTCCGTTTTATAGTACATGCCTT......................................................................................................25120.081010000
...................................................................................................................................................................................TTTTATTTGATTATGATTGACCA................................................................23120.081010000
...............................................................................................................................................................................TTCATTTTATTTGATTATGATTGACCT................................................................27120.081010000
...............................................................................................................................................................................TTCATTTTATTTGATTATGA.......................................................................20120.081010000
.....................................................................................................................................................................................TTATTTGATTATGATTGACCACT..............................................................23120.081001000
...........................................................................................................................................TACTCCGTTTTATAGTACATGCC........................................................................................................23120.081010000
..........................................................................................................................................TTACTCCGTTTTATAGTACATGCC........................................................................................................24120.081010000
................................................................................................................................................................................TCATTTTATTTGATTATGATTGACCAC...............................................................27120.081010000
................................................................................................................................................CGTTTTATAGTACATGCCTT......................................................................................................20120.081010000
....................................................................................................................................................................................................................................................TTTAAGCTGCGTTCACTGCA..20130.081100000
.............................................................................................................................................................................................................................................GCTAATTTTTAAGCTGCGTTCACTGC...26130.081010000
...............................................................................................................................................................................................................................................TAATTTTTAAGCTGCGTTCACTGCAA.26130.081100000
...............................................................................................................................................................................................................................................TAATTTTTAAGCTGCGTTCACTGCA..25130.081100000
...............................................................................................................................................................................................................................................TAATTTTTAAGCTGCGTTCA.......20130.081100000
...............................................................................................................................................................................................................................................TAATTTTTAAGCTGCGTTCAC......21130.081010000
...............................................................................................................................................................................................................................................TAATTTTTAAGCTGCGTTCACT.....22130.081100000
...............................................................................................................................TGACATAAAAATTACTCCGTTTTA...................................................................................................................24130.081010000
droBip1
TA--------------------------------------------------------------------------------------------------------AAACAATAACACAACACATAATGACATAAAAATTACTCAGTTTTGTAGTACATGCCTTTATTTTCATAATTCATTTTATTGGATGACGATTAGACCCGATTTAATATTTTAATTAAATTTTTT-TGTTAGAGCTAATTTTCAAGCTGAGCTCACTGCAACSizeHit CountTotal NormTotal
No Reads
droKik1
GTGAAA----AG------------------------------------------------------------TTTTTTGCACCGAATTAACCTTACCCCCCCCTTAAAACAAAAACACGACATATTATGACATAAAAATTATTCACTCTTATCGTAAATACCTTCATTTTCAAAATTTATTTTATTTGATAAAGATTGGACGCGATTTTATATAGAAATTTTATTTGTC-TATGCAGGCTAATTTTTAAGCTGCATTCACTGCTACSizeHit CountTotal NormTotal
No Reads
droFic1
TA--------------------------------------------------------------------------------------------------------AAACAATAACACAACACATAATGACATAAAAATTACTTAGTTTTATAGTACATGCCTTTATTTTCGAAATTCATTTTATTTGATGATGATCGGACTCGATTTAATATTTAAATAAAATGTTTT-TGTATGAGCTAATTTTCAAGCTGCGTTCACTGCAACSizeHit CountTotal NormTotal
No Reads
droEle1
C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACGTTGAATACCCASizeHit CountTotal NormTotal
No Reads
droRho1
TA--------------------------------------------------------------------------------------------------------AAACAATAACACAACACATAATGACATAAAAATTACTCAGTTTTATAGTACATACCTTTATTTTCAATATTCATTTTATATGCCGACGATTGTACGCGATTTAGTAGTATAAATTAATTTTTT-AGTGGAAGCTAATTTTCGAGCTGCGTTCGGTG----SizeHit CountTotal NormTotal
No Reads
droBia1
ACAACA----CT-------------------------------------------------------------------------A------ATTT--------TAAAACAATAACACAAAACATAGTGACATAAAAATTACTTAGTTTTAAAGGAGATACCATTATTTTCAATATTCATTTTATTTGACGACGAGTGGACGCGATTTAATTGTAGAAATAAATTTTCT-TGTGGAAGCTAATTTTTAAGCTACGTTTGCG----CSizeHit CountTotal NormTotal
No Reads
droTak1
TAAAAA----AT-------------------------------------------------------------------------A------ATTT--------TAAAACAATAACACAACACATAATGACATAAAAATTACTCAGTTTTAGAGTACATACCTTTACTTTCAATATGCATTTTATATGCCGATGATTGGACGCGATTTAGTTATAGAAATTAATTTTTT-ATTGGAAGCTTATTTTGTGGCTGCGTTCTCTGTGACSizeHit CountTotal NormTotal
No Reads
dm3
GTGGAG----GCACCAGTGGCACTAGTGCAGATGGAGGTGGTGG-----------------------------------------------------------------------------------------------T-------------------------------------------------------------------------------------------------------------GCCACACATCCCAGTCGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............CAGTGGCACTAGTGCAGATGG.......................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
........................AGTGCAGATGGAGGTGGTGG-----------------------------------------------------------------------------------------------T-------------------------------------------------------------------------------------------------------------.................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010000
.......................TAGTGCAGATGGAGGTGGTGG-----------------------------------------------------------------------------------------------...............................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CAGTGGCACTAGTGCAGATGGA......................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
...............................ATGGAGGTGGTGG-----------------------------------------------------------------------------------------------T-------------------------------------------------------------------------------------------------------------GCCA.............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GGCACTAGTGCAGATGGAGGTGG.................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
droYak3
A---------------------------------------------------------------------------------------------------------AAACATTATCACAACACATAATGA-ATAAGAAATACTCCGTTTTCTAGTGCATACCTTTATTTTCAATATTTATTTTATTTTACGATAACTAGACACGATTTAATATTAAAATTTATTTT-----------------TTTTAGGTTGCGTTCACTGTTTTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................................................................................................................................................................TTATTTTCAATATTTATTTT...................................................................................2020.50101000000000
droEre2
AT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATGCCATTTACCCACGATTTA---------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/18/2015 at 02:14 AM