dmo_2229

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------################################################## CTAAACTTGTCCGCTTGCGGTACAGTCGTACGATTCTAAACTGCGCTTGCGGTGCAATCGCCTGATTTGCATGTCTTCTCCTAACACCAAAAAAAAAAAGTAGGGTGACTCACGCATACCAAATTAAGTTTTATTACCCGTTCCCACTATTTGTATTTGTACCTATAATTCGAATTGTTATTTATTTTCGACCACTACAAGCTGCAAGTACAATTACATCAGAAAAGGAGTCAATTGGAAGTAGCAGCAAC ******************************************************************************************************************.....................................................(((((............)))))..********************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M046 female body	M060 embryo	V041 embryo	V056 head	V049 head	V110 male body
............................TACGATTCTAAACTGCGCTTGCGG.......................................................................................................................................................................................................	24	0	7	3.86	27	23	4	0	0	0	0
.........................TCGTACGATTCTAAACTGCGCTTGCGG.......................................................................................................................................................................................................	27	0	5	1.20	6	5	1	0	0	0	0
........................GTCGTACGGTTTTAAACTTC...............................................................................................................................................................................................................	20	3	7	1.14	8	4	2	1	0	0	1
...................................................................................................................................................................................................TACAAGCTGCAAGTACAATTACATCAGAA...........................	29	0	1	1.00	1	1	0	0	0	0	0
...........CGCTTGCGGTACAGTCGTACGATT........................................................................................................................................................................................................................	24	0	1	1.00	1	1	0	0	0	0	0
....................TACAGTCGTACGATTCTAAACTGCGCT............................................................................................................................................................................................................	27	0	1	1.00	1	1	0	0	0	0	0
........................GTCGTACGGTTTTAAACT.................................................................................................................................................................................................................	18	2	3	1.00	3	1	1	0	1	0	0
...........CGCTTGCGGTACAGTCGTA.............................................................................................................................................................................................................................	19	0	1	1.00	1	0	0	1	0	0	0
...............................................................................................................................................................................TGTTATTTATTTTCGACCACTACAAGC.................................................	27	0	1	1.00	1	0	1	0	0	0	0
.................................................................................................................................................................................TTATTTATTTTCGACCACTACAAGC.................................................	25	0	1	1.00	1	1	0	0	0	0	0
....................................................................................................................TACCAAATTAAGTTTTATTACCCGTT.............................................................................................................	26	0	1	1.00	1	0	1	0	0	0	0
...............................................................................................................................................................................TTTTATTTATTTTCGACCACTACAAGC.................................................	27	1	1	1.00	1	0	1	0	0	0	0
...........CGCTTGCGGTACAGTCGTACGATTC.......................................................................................................................................................................................................................	25	0	1	1.00	1	1	0	0	0	0	0
............................TACGATTCTAAACTGCGCTTGCGGTG.....................................................................................................................................................................................................	26	0	7	1.00	7	7	0	0	0	0	0
..........................CGTACGGTTCTAAACTTCGA.............................................................................................................................................................................................................	20	3	8	0.75	6	0	5	0	1	0	0
........................GTCGTACGGTTTTAAACTTCG..............................................................................................................................................................................................................	21	3	4	0.75	3	1	0	0	1	1	0
........................................................................................................................................................................TTCGAATTGTTATTTATTTTCGACC..........................................................	25	0	4	0.75	3	0	3	0	0	0	0
............................TACGATTCTAAACTGCGCTTGCGGT......................................................................................................................................................................................................	25	0	7	0.57	4	3	1	0	0	0	0
....................TACAGTCCGACGATCCTA.....................................................................................................................................................................................................................	18	3	18	0.50	9	0	9	0	0	0	0
.........................................................................................................................................................................TCGAATTGTTATTTATTTTCGACCACTA......................................................	28	0	4	0.50	2	2	0	0	0	0	0
...........................................CGCTTGCGGTGCAATCGCCTGATT........................................................................................................................................................................................	24	0	7	0.43	3	3	0	0	0	0	0
...................GTACATTCGTACGATTATAAT...................................................................................................................................................................................................................	21	3	15	0.40	6	6	0	0	0	0	0
...................................................................................................................................................................................................................AATTACATCAGAAAAGGAGTCAATTGG.............	27	0	20	0.35	7	7	0	0	0	0	0
.....................................................................................................................................................................TAATTCGAATTGTTATTTATTTTCG.............................................................	25	0	15	0.33	5	5	0	0	0	0	0
..AAACTTGTCCGCTTGCGG.......................................................................................................................................................................................................................................	18	0	3	0.33	1	0	1	0	0	0	0
....................................TAAACTGCGCTTGCGGTGCAATCGCC.............................................................................................................................................................................................	26	0	7	0.29	2	0	2	0	0	0	0
............................TACGATTCTACACTGCGCTTGCGGT......................................................................................................................................................................................................	25	1	7	0.29	2	0	2	0	0	0	0
.............................ACGATTCTAAACTGCGCTTGCGG.......................................................................................................................................................................................................	23	0	7	0.29	2	2	0	0	0	0	0
........................GTCGTACGGTTTTAAACTT................................................................................................................................................................................................................	19	3	18	0.28	5	2	0	0	1	2	0
.........................................................................................................................................................................TCGAATTGTTATTTATTTTCGACC..........................................................	24	0	4	0.25	1	0	1	0	0	0	0
.....................................................................................................................................................................TAATTCGAATTGTTATTTATTTTCGACC..........................................................	28	0	4	0.25	1	0	1	0	0	0	0
.......................................................................................................................................................................ATTCGAATTGTTATTTATTTTCGACC..........................................................	26	0	4	0.25	1	1	0	0	0	0	0
........................................................................................................................................................................TTCGAATTGTTATTTATTTTCGACCACTA......................................................	29	0	4	0.25	1	1	0	0	0	0	0
....................................................TGCAATCGCCTGATTTGCATGTCTTC.............................................................................................................................................................................	26	0	8	0.25	2	1	1	0	0	0	0
.........................................................TCGCCTGATTTGCATGTCTTCTCC..........................................................................................................................................................................	24	0	9	0.22	2	0	2	0	0	0	0
...................................................................................................................................................................................................................AATTACATCAGAAAAGGAGTCA..................	22	0	20	0.20	4	4	0	0	0	0	0
..........................CGTACGATTCTAAACTGCGCTTGCGG.......................................................................................................................................................................................................	26	0	5	0.20	1	1	0	0	0	0	0
.........................TCGTACGATTCTAAACTGCGCTTGCG........................................................................................................................................................................................................	26	0	5	0.20	1	1	0	0	0	0	0
.........................TCGTACGATTCGAAACTGCGCTTGCGG.......................................................................................................................................................................................................	27	1	5	0.20	1	1	0	0	0	0	0
.........................TCGTACGATTCTAAACTGCGCTTG..........................................................................................................................................................................................................	24	0	5	0.20	1	1	0	0	0	0	0
...................................................................................................................................................................................................................AATTACATCAGAAAAGGAGTCAAT................	24	0	20	0.20	4	4	0	0	0	0	0
.........................TCGTACGATTCTAAACTGCGCTTGCGGC......................................................................................................................................................................................................	28	1	5	0.20	1	1	0	0	0	0	0
.........................TCGTACGATTCTAAACTGCGCTTGCGGTG.....................................................................................................................................................................................................	29	0	5	0.20	1	1	0	0	0	0	0
...........................GTACGATTCTAAACTGCGCTTGCGGC......................................................................................................................................................................................................	26	1	5	0.20	1	1	0	0	0	0	0
...........................................................................................................................................................................................ACGATCACTACAAGTTGCAAGT..........................................	22	3	6	0.17	1	0	1	0	0	0	0
.....................................................................................................................................................................TAATTCGAATTGTTATTTATTTTCGA............................................................	26	0	6	0.17	1	1	0	0	0	0	0
...................................................................................................................................................................................................................AATTACATCAGAAAAGGAGTCAATTG..............	26	0	20	0.15	3	3	0	0	0	0	0
...................................................................................................................................................................................................................AATTACATCAGAAAAGGAGTCAATT...............	25	0	20	0.15	3	3	0	0	0	0	0
.................................TTCTAAACTGCGCTTGCGG.......................................................................................................................................................................................................	19	0	7	0.14	1	1	0	0	0	0	0
............................TACGATTCTAAACTGCGCTTGCGGC......................................................................................................................................................................................................	25	1	7	0.14	1	0	1	0	0	0	0
............................TACGATTCTAAACTGCGCTTGCGGTGC....................................................................................................................................................................................................	27	0	7	0.14	1	1	0	0	0	0	0
............................TACGATTCTAAGCTGCGCTTGCGG.......................................................................................................................................................................................................	24	1	7	0.14	1	1	0	0	0	0	0
...........................................CGCTTGCGGTGCAATCGCCTGATTTG......................................................................................................................................................................................	26	0	7	0.14	1	1	0	0	0	0	0
.............................ACGATTCTAAACTGCGCTTGCGGTGCAA..................................................................................................................................................................................................	28	0	7	0.14	1	1	0	0	0	0	0
............................TACGATTCTAAACTGCGCTTGCG........................................................................................................................................................................................................	23	0	7	0.14	1	1	0	0	0	0	0
............................TACGATTCTAAACTGCGCTTGC.........................................................................................................................................................................................................	22	0	7	0.14	1	0	1	0	0	0	0
..............................................TTGCGGTGCAATCGCCTGATTTG......................................................................................................................................................................................	23	0	8	0.13	1	1	0	0	0	0	0
.....................................................................................................................................................TTTGTATTTGTACCTATAATTCGAATTGT.........................................................................	29	0	8	0.13	1	1	0	0	0	0	0
...................................................................TGCATGTCTTCTCCTAACACCAAAAAAA............................................................................................................................................................	28	0	9	0.11	1	1	0	0	0	0	0
...................................................................TGCATGTCTTCTCCTAACACCAAAAAA.............................................................................................................................................................	27	0	9	0.11	1	1	0	0	0	0	0
.................................................................TGTGCATGTCTTCTCCTAACACCAAAAA..............................................................................................................................................................	28	1	9	0.11	1	0	1	0	0	0	0
..............................................................TGATTTGCATGTCTTCTCCTAACA.....................................................................................................................................................................	24	0	9	0.11	1	0	1	0	0	0	0
...................................................................TGCATGTCTTCTCCTAACACCAAAAAAAA...........................................................................................................................................................	29	0	9	0.11	1	1	0	0	0	0	0
.........................................................TCGCCTGATTTGCATGTCTTCTC...........................................................................................................................................................................	23	0	9	0.11	1	0	1	0	0	0	0
.................................................................TGTGCATGTCTTCTCCTAACACCA..................................................................................................................................................................	24	1	9	0.11	1	1	0	0	0	0	0
...................................................................TGCATGTCTTCTCCTAACACCAAA................................................................................................................................................................	24	0	9	0.11	1	1	0	0	0	0	0
...................................................................................................................................TATTACCCGTTCCCACTATTTGTATTTG............................................................................................	28	0	10	0.10	1	1	0	0	0	0	0
..........................................................................................................................ATTAAGTTTTATTACCCGTTCCCAC........................................................................................................	25	0	10	0.10	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................CAGAAAAGGAGTCAATTGGAAGTAGC......	26	0	20	0.10	2	2	0	0	0	0	0
.............................................................................................................................................TCCCACTATTTGTATTTGTACCTATATC..................................................................................	28	2	10	0.10	1	0	1	0	0	0	0
...................................................................TGCATGTCTTCTCCTAACA.....................................................................................................................................................................	19	0	11	0.09	1	0	1	0	0	0	0
........................................................................................AATAAAAAAGAGTAGGGTAAC..............................................................................................................................................	21	3	15	0.07	1	0	0	0	0	0	1
.....................ACATTCGTACGATTATAA....................................................................................................................................................................................................................	18	2	18	0.06	1	1	0	0	0	0	0
........................GTCGTACGGGTTTAAACT.................................................................................................................................................................................................................	18	3	18	0.06	1	0	0	1	0	0	0
....................TACATTCGTACGATTATAAT...................................................................................................................................................................................................................	20	3	20	0.05	1	1	0	0	0	0	0
.................................................................................................................................................................................................................................AGGAGTCAATTGGAAGTAGCAG....	22	0	20	0.05	1	1	0	0	0	0	0
...................................................................................................................................................................................................................AATTACATCAGAAAAGGAGTC...................	21	0	20	0.05	1	0	1	0	0	0	0
..................................................................................................................................................................................................................CAATTACATCAGAAAAGGAGTCAAC................	25	1	20	0.05	1	0	1	0	0	0	0
.....................ACAGTCCGACGATCCTAA....................................................................................................................................................................................................................	18	3	20	0.05	1	1	0	0	0	0	0
...................................................................................................................................................................................................................AATTACATCAGAAAAGGAGTCAATTGGA............	28	0	20	0.05	1	1	0	0	0	0	0
...................................................................................................................................................................................................................AATTACATCAGAAAAGGAGTCAA.................	23	0	20	0.05	1	1	0	0	0	0	0
.....................................................................................................................................................................................................................TTACATCAGAAAAGGAGTCAATTGG.............	25	0	20	0.05	1	1	0	0	0	0	0
....................................................................................................................................................................................................................ATTACATCAGAAAAGGAGTCAATTGGA............	27	0	20	0.05	1	1	0	0	0	0	0
......................................................................................................................................................................................................................TACATCAGAAAAGGAGTCAATTGG.............	24	0	20	0.05	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................CAGAAAAGGAGTCAATTGGAAG..........	22	0	20	0.05	1	1	0	0	0	0	0
......................................................................................................................................................................................................................TACATCAGAAAAGGAGTCAATTG..............	23	0	20	0.05	1	1	0	0	0	0	0

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CTAAACTTGTCCGCTTGCGGTACAGTCGTACGATTCTAAACTGCGCTTGCGGTGCAATCGCCTGATTTGCATGTCTTCTCCTAACACCAAAAAAAAAAAGTAGGGTGACTCACGCATACCAAATTAAGTTTTATTACCCGTTCCCACTATTTGTATTTGTACCTATAATTCGAATTGTTATTTATTTTCGACCACTACAAGCTGCAAGTACAATTACATCAGAAAAGGAGTCAATTGGAAGTAGCAGCAAC
********************************************************************************************************************.....................................................(((((............)))))..**********************************************************

Read size

# Mismatch

Hit Count

Total Norm

Total

M046
female body

M060
embryo

V041
embryo

V056
head

V049
head

V110
male body

............................TACGATTCTAAACTGCGCTTGCGG.......................................................................................................................................................................................................

3.86

.........................TCGTACGATTCTAAACTGCGCTTGCGG.......................................................................................................................................................................................................

1.20

........................GTCGTACGGTTTTAAACTTC...............................................................................................................................................................................................................

1.14

...................................................................................................................................................................................................TACAAGCTGCAAGTACAATTACATCAGAA...........................

1.00

...........CGCTTGCGGTACAGTCGTACGATT........................................................................................................................................................................................................................

1.00

....................TACAGTCGTACGATTCTAAACTGCGCT............................................................................................................................................................................................................

1.00

........................GTCGTACGGTTTTAAACT.................................................................................................................................................................................................................

1.00

...........CGCTTGCGGTACAGTCGTA.............................................................................................................................................................................................................................

1.00

...............................................................................................................................................................................TGTTATTTATTTTCGACCACTACAAGC.................................................

1.00

.................................................................................................................................................................................TTATTTATTTTCGACCACTACAAGC.................................................

1.00

....................................................................................................................TACCAAATTAAGTTTTATTACCCGTT.............................................................................................................

1.00

...............................................................................................................................................................................TTTTATTTATTTTCGACCACTACAAGC.................................................

1.00

...........CGCTTGCGGTACAGTCGTACGATTC.......................................................................................................................................................................................................................

1.00

............................TACGATTCTAAACTGCGCTTGCGGTG.....................................................................................................................................................................................................

1.00

..........................CGTACGGTTCTAAACTTCGA.............................................................................................................................................................................................................

0.75

........................GTCGTACGGTTTTAAACTTCG..............................................................................................................................................................................................................

0.75

........................................................................................................................................................................TTCGAATTGTTATTTATTTTCGACC..........................................................

0.75

............................TACGATTCTAAACTGCGCTTGCGGT......................................................................................................................................................................................................

0.57

....................TACAGTCCGACGATCCTA.....................................................................................................................................................................................................................

0.50

.........................................................................................................................................................................TCGAATTGTTATTTATTTTCGACCACTA......................................................

0.50

...........................................CGCTTGCGGTGCAATCGCCTGATT........................................................................................................................................................................................

0.43

...................GTACATTCGTACGATTATAAT...................................................................................................................................................................................................................

0.40

...................................................................................................................................................................................................................AATTACATCAGAAAAGGAGTCAATTGG.............

0.35

.....................................................................................................................................................................TAATTCGAATTGTTATTTATTTTCG.............................................................

0.33

..AAACTTGTCCGCTTGCGG.......................................................................................................................................................................................................................................

0.33

....................................TAAACTGCGCTTGCGGTGCAATCGCC.............................................................................................................................................................................................

0.29

............................TACGATTCTACACTGCGCTTGCGGT......................................................................................................................................................................................................

0.29

.............................ACGATTCTAAACTGCGCTTGCGG.......................................................................................................................................................................................................

0.29

........................GTCGTACGGTTTTAAACTT................................................................................................................................................................................................................

0.28

.........................................................................................................................................................................TCGAATTGTTATTTATTTTCGACC..........................................................

0.25

.....................................................................................................................................................................TAATTCGAATTGTTATTTATTTTCGACC..........................................................

0.25

.......................................................................................................................................................................ATTCGAATTGTTATTTATTTTCGACC..........................................................

0.25

........................................................................................................................................................................TTCGAATTGTTATTTATTTTCGACCACTA......................................................

0.25

....................................................TGCAATCGCCTGATTTGCATGTCTTC.............................................................................................................................................................................

0.25

.........................................................TCGCCTGATTTGCATGTCTTCTCC..........................................................................................................................................................................

0.22

...................................................................................................................................................................................................................AATTACATCAGAAAAGGAGTCA..................

0.20

..........................CGTACGATTCTAAACTGCGCTTGCGG.......................................................................................................................................................................................................

0.20

.........................TCGTACGATTCTAAACTGCGCTTGCG........................................................................................................................................................................................................

0.20

.........................TCGTACGATTCGAAACTGCGCTTGCGG.......................................................................................................................................................................................................

0.20

.........................TCGTACGATTCTAAACTGCGCTTG..........................................................................................................................................................................................................

0.20

...................................................................................................................................................................................................................AATTACATCAGAAAAGGAGTCAAT................

0.20

.........................TCGTACGATTCTAAACTGCGCTTGCGGC......................................................................................................................................................................................................

0.20

.........................TCGTACGATTCTAAACTGCGCTTGCGGTG.....................................................................................................................................................................................................

0.20

...........................GTACGATTCTAAACTGCGCTTGCGGC......................................................................................................................................................................................................

0.20

...........................................................................................................................................................................................ACGATCACTACAAGTTGCAAGT..........................................

0.17

.....................................................................................................................................................................TAATTCGAATTGTTATTTATTTTCGA............................................................

0.17

...................................................................................................................................................................................................................AATTACATCAGAAAAGGAGTCAATTG..............

0.15

...................................................................................................................................................................................................................AATTACATCAGAAAAGGAGTCAATT...............

0.15

.................................TTCTAAACTGCGCTTGCGG.......................................................................................................................................................................................................

0.14

............................TACGATTCTAAACTGCGCTTGCGGC......................................................................................................................................................................................................

0.14

............................TACGATTCTAAACTGCGCTTGCGGTGC....................................................................................................................................................................................................

0.14

............................TACGATTCTAAGCTGCGCTTGCGG.......................................................................................................................................................................................................

0.14

...........................................CGCTTGCGGTGCAATCGCCTGATTTG......................................................................................................................................................................................

0.14

.............................ACGATTCTAAACTGCGCTTGCGGTGCAA..................................................................................................................................................................................................

0.14

............................TACGATTCTAAACTGCGCTTGCG........................................................................................................................................................................................................

0.14

............................TACGATTCTAAACTGCGCTTGC.........................................................................................................................................................................................................

0.14

..............................................TTGCGGTGCAATCGCCTGATTTG......................................................................................................................................................................................

0.13

.....................................................................................................................................................TTTGTATTTGTACCTATAATTCGAATTGT.........................................................................

0.13

...................................................................TGCATGTCTTCTCCTAACACCAAAAAAA............................................................................................................................................................

0.11

...................................................................TGCATGTCTTCTCCTAACACCAAAAAA.............................................................................................................................................................

0.11

.................................................................TGTGCATGTCTTCTCCTAACACCAAAAA..............................................................................................................................................................

0.11

..............................................................TGATTTGCATGTCTTCTCCTAACA.....................................................................................................................................................................

0.11

...................................................................TGCATGTCTTCTCCTAACACCAAAAAAAA...........................................................................................................................................................

0.11

.........................................................TCGCCTGATTTGCATGTCTTCTC...........................................................................................................................................................................

0.11

.................................................................TGTGCATGTCTTCTCCTAACACCA..................................................................................................................................................................

0.11

...................................................................TGCATGTCTTCTCCTAACACCAAA................................................................................................................................................................

0.11

...................................................................................................................................TATTACCCGTTCCCACTATTTGTATTTG............................................................................................

0.10

..........................................................................................................................ATTAAGTTTTATTACCCGTTCCCAC........................................................................................................

0.10

...........................................................................................................................................................................................................................CAGAAAAGGAGTCAATTGGAAGTAGC......

0.10

.............................................................................................................................................TCCCACTATTTGTATTTGTACCTATATC..................................................................................

0.10

...................................................................TGCATGTCTTCTCCTAACA.....................................................................................................................................................................

0.09

........................................................................................AATAAAAAAGAGTAGGGTAAC..............................................................................................................................................

0.07

.....................ACATTCGTACGATTATAA....................................................................................................................................................................................................................

0.06

........................GTCGTACGGGTTTAAACT.................................................................................................................................................................................................................

0.06

....................TACATTCGTACGATTATAAT...................................................................................................................................................................................................................

0.05

.................................................................................................................................................................................................................................AGGAGTCAATTGGAAGTAGCAG....

0.05

...................................................................................................................................................................................................................AATTACATCAGAAAAGGAGTC...................

0.05

..................................................................................................................................................................................................................CAATTACATCAGAAAAGGAGTCAAC................

0.05

.....................ACAGTCCGACGATCCTAA....................................................................................................................................................................................................................

0.05

...................................................................................................................................................................................................................AATTACATCAGAAAAGGAGTCAATTGGA............

0.05

...................................................................................................................................................................................................................AATTACATCAGAAAAGGAGTCAA.................

0.05

.....................................................................................................................................................................................................................TTACATCAGAAAAGGAGTCAATTGG.............

0.05

....................................................................................................................................................................................................................ATTACATCAGAAAAGGAGTCAATTGGA............

0.05

......................................................................................................................................................................................................................TACATCAGAAAAGGAGTCAATTGG.............

0.05

...........................................................................................................................................................................................................................CAGAAAAGGAGTCAATTGGAAG..........

0.05

......................................................................................................................................................................................................................TACATCAGAAAAGGAGTCAATTG..............

0.05

GATTTGAACAGGCGAACGCCATGTCAGCATGCTAAGATTTGACGCGAACGCCACGTTAGCGGACTAAACGTACAGAAGAGGATTGTGGTTTTTTTTTTTCATCCCACTGAGTGCGTATGGTTTAATTCAAAATAATGGGCAAGGGTGATAAACATAAACATGGATATTAAGCTTAACAATAAATAAAAGCTGGTGATGTTCGACGTTCATGTTAATGTAGTCTTTTCCTCAGTTAACCTTCATCGTCGTTG ********************************************************.....................................................(((((............)))))..******************************************************************************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M046 female body	M060 embryo	V110 male body	V049 head	V056 head
..................................................................................................................................................................................................GATGTTCGACGTTCATGTTAATGTAGT..............................	27	0	1	7.00	7	5	2	0	0	0
....................................................................................................................................................................................................TGTTCGACGTTCATGTTAATGTAGT..............................	25	0	1	2.00	2	2	0	0	0	0
..................................................................................................................................................................................................GATGTTCGACGTTCATGTTAATGTAG...............................	26	0	1	2.00	2	2	0	0	0	0
...........GCGAACCCCATGTCAGCATGCTAAGAT.....................................................................................................................................................................................................................	27	1	1	1.00	1	1	0	0	0	0
.....................................................................................................................................................................................................GTTCGACGTTCATGTTAATGTAGT..............................	24	0	1	1.00	1	1	0	0	0	0
.................................................................................................................................................................................................CGATGTTCGACGTTCATGTTAATGTAGT..............................	28	1	1	1.00	1	1	0	0	0	0
..................................................................................................................................................................................................GATGTTCGACGTTCATGTTAATG..................................	23	0	1	1.00	1	1	0	0	0	0
................................................................................................................GCGTATGGTTTAATTCAAAAT......................................................................................................................	21	0	1	1.00	1	1	0	0	0	0
................................................................................................................................................................................................GTGATGTTCGACGTTCATGTTAATGTAGT..............................	29	0	1	1.00	1	1	0	0	0	0
......................GTCAGCATGCTAAGATTTGACGCGA............................................................................................................................................................................................................	25	0	1	1.00	1	1	0	0	0	0
...................................................................................................................................................................................................ATGTTCGACGTTCATGTTAATGTAGT..............................	26	0	1	1.00	1	1	0	0	0	0
....................ATGTAAGCATGCTAATATTA...................................................................................................................................................................................................................	20	3	20	0.80	16	0	0	16	0	0
...................CATGTAAGCATGCTAATATTA...................................................................................................................................................................................................................	21	3	15	0.67	10	6	0	4	0	0
..........................................................................................................................................................................................................ACGTTCATGTTAATGTAGTCTTTTCCT......................	27	0	20	0.45	9	9	0	0	0	0
..................................................................................................................................................................................................TTTGTTCGATGTTCATGTTAATGTAGT..............................	27	3	3	0.33	1	1	0	0	0	0
.....................................................CGTTAGCGGACTAAACGTACAGAA..............................................................................................................................................................................	24	0	8	0.25	2	2	0	0	0	0
...................CATGTAAGCATGCTAATATT....................................................................................................................................................................................................................	20	2	15	0.20	3	3	0	0	0	0
..................ACATGTAAGCATGCTAATATT....................................................................................................................................................................................................................	21	3	16	0.19	3	2	0	0	0	1
........................................................................................................................................................................................................CGACGTTCATGTTAATGTAGTCTTTT.........................	26	0	20	0.15	3	0	3	0	0	0
.......................................................................................................................................................................................................TCGACGTTCATGTTAATGTAGTCTT...........................	25	0	20	0.15	3	0	3	0	0	0
....................................CTTTGACGCGAATGCCACGTG..................................................................................................................................................................................................	21	3	7	0.14	1	0	0	0	1	0
...................................................CACGTTAGCGGACTAAACGTACGG................................................................................................................................................................................	24	1	8	0.13	1	0	1	0	0	0
.......................................................................................................................................................ACATAAACATGGATATTAAGCTTAACA.........................................................................	27	0	8	0.13	1	1	0	0	0	0
...........................................................................................................................................................AAACATGGATATTAAGCTTTACAA........................................................................	24	1	8	0.13	1	1	0	0	0	0
................................................CGCCACGTTAGCGGACTAAACGTACAGAA..............................................................................................................................................................................	29	0	8	0.13	1	1	0	0	0	0
.....................................................................................................................................................AAACATAAACATGGATATTAAGCTTAACA.........................................................................	29	0	8	0.13	1	1	0	0	0	0
..............................................................................................................................................................CATGGATATTAAGCTTAACAATAAATA..................................................................	27	0	8	0.13	1	0	1	0	0	0
.....................................................................................................................................................AAACATAAACATGGATATTAAGCTTA............................................................................	26	0	8	0.13	1	1	0	0	0	0
.........................................................................................................................................................ATAAACATGGATATTAAGCTTAACAA........................................................................	26	0	8	0.13	1	1	0	0	0	0
....................................................ACGTTAGCGGACTAAACGTACAGAA..............................................................................................................................................................................	25	0	8	0.13	1	1	0	0	0	0
...................CATGTAAGCATGCTAATAT.....................................................................................................................................................................................................................	19	2	18	0.11	2	2	0	0	0	0
...............................................................CTAAACGTACAGAAGAGGATTGTG....................................................................................................................................................................	24	0	9	0.11	1	1	0	0	0	0
........................................................TAGCGGACTAAACGTACAGAAGAGGAT........................................................................................................................................................................	27	0	9	0.11	1	1	0	0	0	0
............................................................................................................................ATTCAAAATAATGGGCAAGGGTGATC.....................................................................................................	26	1	10	0.10	1	1	0	0	0	0
...............................................................................................................................CAAAATAATGGGCAAGGGTGATAAACA.................................................................................................	27	0	10	0.10	1	1	0	0	0	0
...........................................................................................TTTTTTTTCATCCCACTGAGTGCGT.......................................................................................................................................	25	0	11	0.09	1	0	1	0	0	0
...............................................................................................................................................................ATGGATATTAAGCTTAACAATAAATA..................................................................	26	0	12	0.08	1	1	0	0	0	0
............................................................................................................................................................TCAATGGATATTAAGCTTAACAATAAATA..................................................................	29	3	12	0.08	1	0	1	0	0	0
...................CATGTAAGCATGCTAATATTG...................................................................................................................................................................................................................	21	3	15	0.07	1	0	0	1	0	0
.....................................................................................................................................................................................................CTTCGACGTTCATGTTAATGGATT..............................	24	3	20	0.05	1	0	1	0	0	0
..........................................................................................................................................................................................................ACGTTCATGTTAATGTAGTCTT...........................	22	0	20	0.05	1	0	1	0	0	0
........................................................................................................................................................................................................................GTAGTCTTTTCCTCAGTTAACCTTCATC.......	28	0	20	0.05	1	1	0	0	0	0
........................................................................................................................................................................................................CGACGTTCATGTTAATGTAGTCTTTTCCT......................	29	0	20	0.05	1	0	1	0	0	0
...............................................................................................................................................................................................................................TTTCCTCAGTTAACCTTCATCGTC....	24	0	20	0.05	1	0	1	0	0	0
......................................................................................................................................................................................................TTCGACGTTCATGTTAATGTAGTCTTT..........................	27	0	20	0.05	1	0	1	0	0	0
..................................................................................................................................................................................................................................CCTCAGTTAACCTTCATCGTCGTT.	24	0	20	0.05	1	0	1	0	0	0
...................................................................................................................................................................................................................TTAATGTAGTCTTTCCCT......................	18	1	20	0.05	1	1	0	0	0	0
.......................................................................................................................................................................................................TCGACGTTCATGTTAATGTAGTCTTTTCC.......................	29	0	20	0.05	1	0	1	0	0	0
...........CCAAACGCCATGCCAGCA..............................................................................................................................................................................................................................	18	3	20	0.05	1	0	0	1	0	0
.......................................................................................................................................................................................................CCGACGTTCATGTTAATGTAGTCTT...........................	25	1	20	0.05	1	0	1	0	0	0
.........................................................................................................................................................................................................GACGTTCATGTTAATGTAGTCTTTTCCT......................	28	0	20	0.05	1	1	0	0	0	0
........................................................................................................................................................................................................................GTAGTCTTTTCCTCAGTTAACCTTCAT........	27	0	20	0.05	1	1	0	0	0	0
......................................................................................................................................................................................................................ATGTAGTCTTTTCCTCAGTTAACCTT...........	26	0	20	0.05	1	1	0	0	0	0

GATTTGAACAGGCGAACGCCATGTCAGCATGCTAAGATTTGACGCGAACGCCACGTTAGCGGACTAAACGTACAGAAGAGGATTGTGGTTTTTTTTTTTCATCCCACTGAGTGCGTATGGTTTAATTCAAAATAATGGGCAAGGGTGATAAACATAAACATGGATATTAAGCTTAACAATAAATAAAAGCTGGTGATGTTCGACGTTCATGTTAATGTAGTCTTTTCCTCAGTTAACCTTCATCGTCGTTG
**********************************************************.....................................................(((((............)))))..********************************************************************************************************************

Read size

# Mismatch

Hit Count

Total Norm

Total

M046
female body

M060
embryo

V110
male body

V049
head

V056
head

..................................................................................................................................................................................................GATGTTCGACGTTCATGTTAATGTAGT..............................

7.00

....................................................................................................................................................................................................TGTTCGACGTTCATGTTAATGTAGT..............................

2.00

..................................................................................................................................................................................................GATGTTCGACGTTCATGTTAATGTAG...............................

2.00

...........GCGAACCCCATGTCAGCATGCTAAGAT.....................................................................................................................................................................................................................

1.00

.....................................................................................................................................................................................................GTTCGACGTTCATGTTAATGTAGT..............................

1.00

.................................................................................................................................................................................................CGATGTTCGACGTTCATGTTAATGTAGT..............................

1.00

..................................................................................................................................................................................................GATGTTCGACGTTCATGTTAATG..................................

1.00

................................................................................................................GCGTATGGTTTAATTCAAAAT......................................................................................................................

1.00

................................................................................................................................................................................................GTGATGTTCGACGTTCATGTTAATGTAGT..............................

1.00

......................GTCAGCATGCTAAGATTTGACGCGA............................................................................................................................................................................................................

1.00

...................................................................................................................................................................................................ATGTTCGACGTTCATGTTAATGTAGT..............................

1.00

....................ATGTAAGCATGCTAATATTA...................................................................................................................................................................................................................

0.80

...................CATGTAAGCATGCTAATATTA...................................................................................................................................................................................................................

0.67

..........................................................................................................................................................................................................ACGTTCATGTTAATGTAGTCTTTTCCT......................

0.45

..................................................................................................................................................................................................TTTGTTCGATGTTCATGTTAATGTAGT..............................

0.33

.....................................................CGTTAGCGGACTAAACGTACAGAA..............................................................................................................................................................................

0.25

...................CATGTAAGCATGCTAATATT....................................................................................................................................................................................................................

0.20

..................ACATGTAAGCATGCTAATATT....................................................................................................................................................................................................................

0.19

........................................................................................................................................................................................................CGACGTTCATGTTAATGTAGTCTTTT.........................

0.15

.......................................................................................................................................................................................................TCGACGTTCATGTTAATGTAGTCTT...........................

0.15

....................................CTTTGACGCGAATGCCACGTG..................................................................................................................................................................................................

0.14

...................................................CACGTTAGCGGACTAAACGTACGG................................................................................................................................................................................

0.13

.......................................................................................................................................................ACATAAACATGGATATTAAGCTTAACA.........................................................................

0.13

...........................................................................................................................................................AAACATGGATATTAAGCTTTACAA........................................................................

0.13

................................................CGCCACGTTAGCGGACTAAACGTACAGAA..............................................................................................................................................................................

0.13

.....................................................................................................................................................AAACATAAACATGGATATTAAGCTTAACA.........................................................................

0.13

..............................................................................................................................................................CATGGATATTAAGCTTAACAATAAATA..................................................................

0.13

.....................................................................................................................................................AAACATAAACATGGATATTAAGCTTA............................................................................

0.13

.........................................................................................................................................................ATAAACATGGATATTAAGCTTAACAA........................................................................

0.13

....................................................ACGTTAGCGGACTAAACGTACAGAA..............................................................................................................................................................................

0.13

...................CATGTAAGCATGCTAATAT.....................................................................................................................................................................................................................

0.11

...............................................................CTAAACGTACAGAAGAGGATTGTG....................................................................................................................................................................

0.11

........................................................TAGCGGACTAAACGTACAGAAGAGGAT........................................................................................................................................................................

0.11

............................................................................................................................ATTCAAAATAATGGGCAAGGGTGATC.....................................................................................................

0.10

...............................................................................................................................CAAAATAATGGGCAAGGGTGATAAACA.................................................................................................

0.10

...........................................................................................TTTTTTTTCATCCCACTGAGTGCGT.......................................................................................................................................

0.09

...............................................................................................................................................................ATGGATATTAAGCTTAACAATAAATA..................................................................

0.08

............................................................................................................................................................TCAATGGATATTAAGCTTAACAATAAATA..................................................................

0.08

...................CATGTAAGCATGCTAATATTG...................................................................................................................................................................................................................

0.07

.....................................................................................................................................................................................................CTTCGACGTTCATGTTAATGGATT..............................

0.05

..........................................................................................................................................................................................................ACGTTCATGTTAATGTAGTCTT...........................

0.05

........................................................................................................................................................................................................................GTAGTCTTTTCCTCAGTTAACCTTCATC.......

0.05

........................................................................................................................................................................................................CGACGTTCATGTTAATGTAGTCTTTTCCT......................

0.05

...............................................................................................................................................................................................................................TTTCCTCAGTTAACCTTCATCGTC....

0.05

......................................................................................................................................................................................................TTCGACGTTCATGTTAATGTAGTCTTT..........................

0.05

..................................................................................................................................................................................................................................CCTCAGTTAACCTTCATCGTCGTT.

0.05

...................................................................................................................................................................................................................TTAATGTAGTCTTTCCCT......................

0.05

.......................................................................................................................................................................................................TCGACGTTCATGTTAATGTAGTCTTTTCC.......................

0.05

...........CCAAACGCCATGCCAGCA..............................................................................................................................................................................................................................

0.05

.......................................................................................................................................................................................................CCGACGTTCATGTTAATGTAGTCTT...........................

0.05

.........................................................................................................................................................................................................GACGTTCATGTTAATGTAGTCTTTTCCT......................

0.05

........................................................................................................................................................................................................................GTAGTCTTTTCCTCAGTTAACCTTCAT........

0.05

......................................................................................................................................................................................................................ATGTAGTCTTTTCCTCAGTTAACCTT...........

0.05

Species	Coordinate	ID	Alignment
droMoj3	scaffold_6541:2157366-2157616 +	dmo_2229	CTAAACTTGTCCGCTTGCGGTACAGTCGTACGATTCTAAACTGCGCTTGCGGTGCAATCGCCTGATTTGCATGTCTTCTCCTAACACCAAAAAAAAAAAGTAGGGTGACTCACGCATACCAAATTAAGTTTTATTACCCGTTCCCACTATTTGTATTTGTACCTATAATTCGAATTGTTATTTATTTTCGACCACTACAAGCTGCAAGTACAATTACATCAGAAAAGGAGTCAATTGGAAGTAGCAGCAAC

Species

Coordinate

Alignment

droMoj3

scaffold_6541:2157366-2157616 +

dmo_2229

CTAAACTTGTCCGCTTGCGGTACAGTCGTACGATTCTAAACTGCGCTTGCGGTGCAATCGCCTGATTTGCATGTCTTCTCCTAACACCAAAAAAAAAAAGTAGGGTGACTCACGCATACCAAATTAAGTTTTATTACCCGTTCCCACTATTTGTATTTGTACCTATAATTCGAATTGTTATTTATTTTCGACCACTACAAGCTGCAAGTACAATTACATCAGAAAAGGAGTCAATTGGAAGTAGCAGCAAC

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droMoj3

CTAAACTTGTCCGCTTGCGGTACAGTCGTACGATTCTAAACTGCGCTTGCGGTGCAATCGCCTGATTTGCATGTCTTCTCCTAACACCAAAAAAAAAAAGTAGGGTGACTCACGCATACCAAATTAAGTTTTATTACCCGTTCCCACTATTTGTATTTGTACCTATAATTCGAATTGTTATTTATTTTCGACCACTACAAGCTGCAAGTACAATTACATCAGAAAAGGAGTCAATTGGAAGTAGCAGCAAC	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
............................TACGATTCTAAACTGCGCTTGCGG.......................................................................................................................................................................................................	24	7	3.86	27	23	0	0	0	4	0
.........................TCGTACGATTCTAAACTGCGCTTGCGG.......................................................................................................................................................................................................	27	5	1.20	6	5	0	0	0	1	0
...................................................................................................................................................................................................TACAAGCTGCAAGTACAATTACATCAGAA...........................	29	1	1.00	1	1	0	0	0	0	0
...........CGCTTGCGGTACAGTCGTACGATT........................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
....................TACAGTCGTACGATTCTAAACTGCGCT............................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
...........CGCTTGCGGTACAGTCGTA.............................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0
...............................................................................................................................................................................TGTTATTTATTTTCGACCACTACAAGC.................................................	27	1	1.00	1	0	0	0	0	1	0
.................................................................................................................................................................................TTATTTATTTTCGACCACTACAAGC.................................................	25	1	1.00	1	1	0	0	0	0	0
....................................................................................................................TACCAAATTAAGTTTTATTACCCGTT.............................................................................................................	26	1	1.00	1	0	0	0	0	1	0
...........CGCTTGCGGTACAGTCGTACGATTC.......................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
............................TACGATTCTAAACTGCGCTTGCGGTG.....................................................................................................................................................................................................	26	7	1.00	7	7	0	0	0	0	0
........................................................................................................................................................................TTCGAATTGTTATTTATTTTCGACC..........................................................	25	4	0.75	3	0	0	0	0	3	0
............................TACGATTCTAAACTGCGCTTGCGGT......................................................................................................................................................................................................	25	7	0.57	4	3	0	0	0	1	0
.........................................................................................................................................................................TCGAATTGTTATTTATTTTCGACCACTA......................................................	28	4	0.50	2	2	0	0	0	0	0
...........................................CGCTTGCGGTGCAATCGCCTGATT........................................................................................................................................................................................	24	7	0.43	3	3	0	0	0	0	0
...................................................................................................................................................................................................................AATTACATCAGAAAAGGAGTCAATTGG.............	27	20	0.35	7	7	0	0	0	0	0
.....................................................................................................................................................................TAATTCGAATTGTTATTTATTTTCG.............................................................	25	15	0.33	5	5	0	0	0	0	0
..AAACTTGTCCGCTTGCGG.......................................................................................................................................................................................................................................	18	3	0.33	1	0	0	0	0	1	0
....................................TAAACTGCGCTTGCGGTGCAATCGCC.............................................................................................................................................................................................	26	7	0.29	2	0	0	0	0	2	0
.............................ACGATTCTAAACTGCGCTTGCGG.......................................................................................................................................................................................................	23	7	0.29	2	2	0	0	0	0	0
.........................................................................................................................................................................TCGAATTGTTATTTATTTTCGACC..........................................................	24	4	0.25	1	0	0	0	0	1	0
.....................................................................................................................................................................TAATTCGAATTGTTATTTATTTTCGACC..........................................................	28	4	0.25	1	0	0	0	0	1	0
.......................................................................................................................................................................ATTCGAATTGTTATTTATTTTCGACC..........................................................	26	4	0.25	1	1	0	0	0	0	0
........................................................................................................................................................................TTCGAATTGTTATTTATTTTCGACCACTA......................................................	29	4	0.25	1	1	0	0	0	0	0
....................................................TGCAATCGCCTGATTTGCATGTCTTC.............................................................................................................................................................................	26	8	0.25	2	1	0	0	0	1	0
.........................................................TCGCCTGATTTGCATGTCTTCTCC..........................................................................................................................................................................	24	9	0.22	2	0	0	0	0	2	0
...................................................................................................................................................................................................................AATTACATCAGAAAAGGAGTCA..................	22	20	0.20	4	4	0	0	0	0	0
..........................CGTACGATTCTAAACTGCGCTTGCGG.......................................................................................................................................................................................................	26	5	0.20	1	1	0	0	0	0	0
.........................TCGTACGATTCTAAACTGCGCTTGCG........................................................................................................................................................................................................	26	5	0.20	1	1	0	0	0	0	0
.........................TCGTACGATTCTAAACTGCGCTTG..........................................................................................................................................................................................................	24	5	0.20	1	1	0	0	0	0	0
...................................................................................................................................................................................................................AATTACATCAGAAAAGGAGTCAAT................	24	20	0.20	4	4	0	0	0	0	0
.........................TCGTACGATTCTAAACTGCGCTTGCGGC......................................................................................................................................................................................................	28	5	0.20	1	1	0	0	0	0	0
.........................TCGTACGATTCTAAACTGCGCTTGCGGTG.....................................................................................................................................................................................................	29	5	0.20	1	1	0	0	0	0	0
...........................GTACGATTCTAAACTGCGCTTGCGGC......................................................................................................................................................................................................	26	5	0.20	1	1	0	0	0	0	0
.....................................................................................................................................................................TAATTCGAATTGTTATTTATTTTCGA............................................................	26	6	0.17	1	1	0	0	0	0	0
...................................................................................................................................................................................................................AATTACATCAGAAAAGGAGTCAATTG..............	26	20	0.15	3	3	0	0	0	0	0
...................................................................................................................................................................................................................AATTACATCAGAAAAGGAGTCAATT...............	25	20	0.15	3	3	0	0	0	0	0
.................................TTCTAAACTGCGCTTGCGG.......................................................................................................................................................................................................	19	7	0.14	1	1	0	0	0	0	0
............................TACGATTCTAAACTGCGCTTGCGGC......................................................................................................................................................................................................	25	7	0.14	1	0	0	0	0	1	0
............................TACGATTCTAAACTGCGCTTGCGGTGC....................................................................................................................................................................................................	27	7	0.14	1	1	0	0	0	0	0
...........................................CGCTTGCGGTGCAATCGCCTGATTTG......................................................................................................................................................................................	26	7	0.14	1	1	0	0	0	0	0
.............................ACGATTCTAAACTGCGCTTGCGGTGCAA..................................................................................................................................................................................................	28	7	0.14	1	1	0	0	0	0	0
............................TACGATTCTAAACTGCGCTTGCG........................................................................................................................................................................................................	23	7	0.14	1	1	0	0	0	0	0
............................TACGATTCTAAACTGCGCTTGC.........................................................................................................................................................................................................	22	7	0.14	1	0	0	0	0	1	0
..............................................TTGCGGTGCAATCGCCTGATTTG......................................................................................................................................................................................	23	8	0.13	1	1	0	0	0	0	0
.....................................................................................................................................................TTTGTATTTGTACCTATAATTCGAATTGT.........................................................................	29	8	0.13	1	1	0	0	0	0	0
...................................................................TGCATGTCTTCTCCTAACACCAAAAAAA............................................................................................................................................................	28	9	0.11	1	1	0	0	0	0	0
...................................................................TGCATGTCTTCTCCTAACACCAAAAAA.............................................................................................................................................................	27	9	0.11	1	1	0	0	0	0	0
..............................................................TGATTTGCATGTCTTCTCCTAACA.....................................................................................................................................................................	24	9	0.11	1	0	0	0	0	1	0
...................................................................TGCATGTCTTCTCCTAACACCAAAAAAAA...........................................................................................................................................................	29	9	0.11	1	1	0	0	0	0	0
.........................................................TCGCCTGATTTGCATGTCTTCTC...........................................................................................................................................................................	23	9	0.11	1	0	0	0	0	1	0
...................................................................TGCATGTCTTCTCCTAACACCAAA................................................................................................................................................................	24	9	0.11	1	1	0	0	0	0	0
...................................................................................................................................TATTACCCGTTCCCACTATTTGTATTTG............................................................................................	28	10	0.10	1	1	0	0	0	0	0
..........................................................................................................................ATTAAGTTTTATTACCCGTTCCCAC........................................................................................................	25	10	0.10	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................CAGAAAAGGAGTCAATTGGAAGTAGC......	26	20	0.10	2	2	0	0	0	0	0
.............................................................................................................................................TCCCACTATTTGTATTTGTACCTATATC..................................................................................	28	10	0.10	1	0	0	0	0	1	0
...................................................................TGCATGTCTTCTCCTAACA.....................................................................................................................................................................	19	11	0.09	1	0	0	0	0	1	0
.................................................................................................................................................................................................................................AGGAGTCAATTGGAAGTAGCAG....	22	20	0.05	1	1	0	0	0	0	0
...................................................................................................................................................................................................................AATTACATCAGAAAAGGAGTC...................	21	20	0.05	1	0	0	0	0	1	0
..................................................................................................................................................................................................................CAATTACATCAGAAAAGGAGTCAAC................	25	20	0.05	1	0	0	0	0	1	0
...................................................................................................................................................................................................................AATTACATCAGAAAAGGAGTCAATTGGA............	28	20	0.05	1	1	0	0	0	0	0
...................................................................................................................................................................................................................AATTACATCAGAAAAGGAGTCAA.................	23	20	0.05	1	1	0	0	0	0	0
.....................................................................................................................................................................................................................TTACATCAGAAAAGGAGTCAATTGG.............	25	20	0.05	1	1	0	0	0	0	0
....................................................................................................................................................................................................................ATTACATCAGAAAAGGAGTCAATTGGA............	27	20	0.05	1	1	0	0	0	0	0
......................................................................................................................................................................................................................TACATCAGAAAAGGAGTCAATTGG.............	24	20	0.05	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................CAGAAAAGGAGTCAATTGGAAG..........	22	20	0.05	1	1	0	0	0	0	0
......................................................................................................................................................................................................................TACATCAGAAAAGGAGTCAATTG..............	23	20	0.05	1	1	0	0	0	0	0

dmo_2229

scaffold_6541:2157416-2157566 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-3.6	-2.7