ID:

dmo_2224

 Coordinate:

scaffold_6541:1824117-1824267 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-2.8 -2.6 -2.6

Flybase annnotation

CDS [Dmoj\GI14225-cds]; exon [dmoj_GLEANR_14534:1]; intron [Dmoj\GI14225-in]

Repeatable elements

NameClassFamilyStrand
(TCTG)nSimple_repeatSimple_repeat+
Homo6DNAhAT-Pegasus+
mature
  1. scaffold_140:119-140 +
  2. scaffold_1960:9214-9235 +
  3. scaffold_4004:4725-4746 +
  4. scaffold_4218:3085-3106 +
  5. scaffold_4932:1065-1086 +
  6. scaffold_6403:43892-43913 +
  7. scaffold_6482:2301324-2301345 +
  8. scaffold_6498:2196856-2196877 +
  9. scaffold_6498:2273995-2274016 +
  10. scaffold_6498:2750086-2750107 +
  11. scaffold_6500:29811370-29811391 +
  12. scaffold_6540:680860-680881 +
  13. scaffold_6540:2366305-2366326 +
  14. scaffold_6540:4963072-4963093 +
  15. scaffold_6541:937522-937543 +
  16. scaffold_6541:1808916-1808937 +
  17. scaffold_6541:1819885-1819906 +
  18. dmo_2224  scaffold_6541:1824181-1824202 +
  19. scaffold_6680:23791812-23791833 +
  20. scaffold_6680:24083516-24083537 +
  21. scaffold_1763:819-840 +
  22. scaffold_3838:1087-1108 +
  23. scaffold_4207:3970-3991 +
  24. scaffold_4281:694-715 +
  25. scaffold_5777:5459-5480 +
  26. scaffold_6071:2872-2893 +
  27. scaffold_6452:32933-32954 +
  28. scaffold_6482:148216-148237 +
  29. scaffold_6482:1115875-1115896 +
  30. scaffold_6487:6192-6213 +
  31. scaffold_6496:14222644-14222665 +
  32. scaffold_6496:19010937-19010958 +
  33. scaffold_6496:26636812-26636833 +
  34. scaffold_6498:2539351-2539372 +
  35. scaffold_6500:30692724-30692745 +
  36. scaffold_6500:31863027-31863048 +
  37. scaffold_6500:32219343-32219364 +
  38. scaffold_6540:13778404-13778425 +
  39. scaffold_6540:15900223-15900244 +
  40. scaffold_6541:618817-618838 +
star
  1. scaffold_140:148-173 +
  2. scaffold_1666:5731-5756 +
  3. scaffold_4053:3080-3105 +
  4. scaffold_4331:7166-7191 +
  5. scaffold_4613:2245-2270 +
  6. scaffold_6293:1218-1243 +
  7. scaffold_6403:6440-6465 +
  8. scaffold_6441:115367-115392 +
  9. scaffold_6482:2640274-2640299 +
  10. scaffold_6498:1260072-1260097 +
  11. scaffold_6498:1616019-1616044 +
  12. scaffold_6500:29497676-29497701 +
  13. scaffold_6500:31639699-31639724 +
  14. scaffold_6540:755383-755408 +
  15. scaffold_6540:1048822-1048847 +
  16. scaffold_6540:13778433-13778458 +
  17. scaffold_6541:1819914-1819939 +
  18. dmo_2224  scaffold_6541:1824210-1824235 +
  19. scaffold_6680:23791841-23791866 +
  20. scaffold_6680:23932397-23932422 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CACACCGATCACTCCGAGATGAATCACGAAGCACCGCTATTCTCATACAGGTATATATGATGTTTTTCAGGGCGACGAGCTGCCGAGCTGTCCGTCTGTCTGTCTGTCCGTCTGTCCGTATGTTTGAACGCGTCGATTTCCGAAGATATAAGAGCTAGAGACTTCAATTATTTTTTAAATGACCGTATATACAGCGCAGATGTCGAGTTTGCTTTTAAAATTCGATAAATCATCCCGTTATGTTTTTATCG
******************************************************************************************************************((..((.((((.......(((.....)))........))))))..))........********************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 M060
embryo
 V041
embryo
.......................TCACGAAGCACCGCTATTCTCA.............................................................................................................................................................................................................. 22 0 2 0.50 1 1 0 0 0
.................GATGAATCACGAAGCACCGCTATT.................................................................................................................................................................................................................. 24 0 2 0.50 1 0 1 0 0
....................GAATCACGAAGCACCGCTATT.................................................................................................................................................................................................................. 21 0 2 0.50 1 1 0 0 0
...........CTCCGAGATGAATCACGAAGCACCGC...................................................................................................................................................................................................................... 26 0 2 0.50 1 1 0 0 0
.......................................................................................................................................................................................CGTATATACAGCGCAGATGTCGA............................................. 23 0 4 0.25 1 0 1 0 0
...............................................................................................................................................AGATATAAGACCTAGAGACTTCAATTA................................................................................. 27 1 8 0.13 1 1 0 0 0
......................................................................................................................................................................................................................TTAAAATTCGATAAATCATCCCGTT............ 25 0 20 0.10 2 2 0 0 0
..................................................................................................................TCCGTATGTTTGAACGCGTCGA................................................................................................................... 22 0 20 0.10 2 2 0 0 0
.............................................................GTTTTACAGTCCGACGAGC........................................................................................................................................................................... 19 3 15 0.07 1 0 0 1 0
...............................................................................................................................................AGATATAAGAGCTAGAGACTTCAATT.................................................................................. 26 0 20 0.05 1 0 0 1 0
...............................................................................................................................................................................................................TTTGCTTTTAAAATTCGATAAATCATC................. 27 0 20 0.05 1 1 0 0 0
..................................................................................................TCTGTCTGTCCGTCTGTCCGT.................................................................................................................................... 21 0 20 0.05 1 0 0 1 0
.....................................................................................................................................CGATTTCCGAAGATATAAGAGCTAG............................................................................................. 25 0 20 0.05 1 1 0 0 0
..........................................................................................................................TTTGAACGCGTCGATTTCCGAAG.......................................................................................................... 23 0 20 0.05 1 1 0 0 0
......................................................................................................................TATGTTTGAACGCGTCGATTTCCGAAGA......................................................................................................... 28 0 20 0.05 1 0 1 0 0
...........................................................................................................................................................................................................................ATTCGATAAATCATCCCGTTATGTT....... 25 0 20 0.05 1 1 0 0 0
..............................................................................................................................................AAGATATAAGAGCTAGAGACTTCAAT................................................................................... 26 0 20 0.05 1 0 0 0 1
...............................................................................................................................................AGATATAAGAGCTAGAGACTTCAAGTAT................................................................................ 28 1 20 0.05 1 1 0 0 0
............................................................................................................................TGAACGCGTCGATTTCCGAAG.......................................................................................................... 21 0 20 0.05 1 1 0 0 0
................................................................................................................................CGCGTCGATTTCCGAAGAT........................................................................................................ 19 0 20 0.05 1 1 0 0 0
..............................................................................................................TCTGTCCGTATGTTTGAACG......................................................................................................................... 20 0 20 0.05 1 1 0 0 0
.............................................................................................GTCTGTCTGTCTGTCCGTCTG......................................................................................................................................... 21 0 20 0.05 1 0 1 0 0

Anti-sense strand reads

GTGTGGCTAGTGAGGCTCTACTTAGTGCTTCGTGGCGATAAGAGTATGTCCATATATACTACAAAAAGTCCCGCTGCTCGACGGCTCGACAGGCAGACAGACAGACAGGCAGACAGGCATACAAACTTGCGCAGCTAAAGGCTTCTATATTCTCGATCTCTGAAGTTAATAAAAAATTTACTGGCATATATGTCGCGTCTACAGCTCAAACGAAAATTTTAAGCTATTTAGTAGGGCAATACAAAAATAGC
**********************************************************************************((..((.((((.......(((.....)))........))))))..))........****************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 M060
embryo
 V041
embryo
..................................................................................................AGACAGACAGGCAGACAGG...................................................................................................................................... 19 0 20 0.65 13 0 13 0 0
.........................TGCTTCGTGGCGATGAGAGT.............................................................................................................................................................................................................. 20 1 2 0.50 1 1 0 0 0
...............................................................AAAAGTCCCGCTGCTCGA.......................................................................................................................................................................... 18 0 3 0.33 1 1 0 0 0
..................................................................................................................................GCAGCTAAAGGCTTCTATATTCT.................................................................................................. 23 0 20 0.05 1 0 0 0 1
...................................................................................................................................................TATTCTCGATCTCTGAAGTTA................................................................................... 21 0 20 0.05 1 1 0 0 0
..............................................................................................................................................................................................................................GCTATTTAGTAGGGCAATAC......... 20 0 20 0.05 1 1 0 0 0
..............................................................................................AGACAGACAGACAGGCAGACA........................................................................................................................................ 21 0 20 0.05 1 0 1 0 0
.......................................................................................GACAGGCAGACAGACAGACAG............................................................................................................................................... 21 0 20 0.05 1 1 0 0 0
.......................................................................................................................................................................................................................ATTTTAAGCTATTTAGTAGGGCAATA.......... 26 0 20 0.05 1 0 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6541:1824067-1824317 + dmo_2224 CACACCGATCACTCCGAGATGAAT-----------CACGAAGCACCGCTATTCTCATACA-GGTATATATGATGTTTTTCAGGGCGACGAGCTGC--CGAG------CTGTCCGTCTGTCTGTCTGTCCGTCTGT-CCGTATGTTTGAACGCGTC--GATT--TCCGAAGATATAAGAGCTAGAGACTTCAATTATTTTTTAAATGAC----C------GTATATACAGCGCAGATGTCGAGTTTGCTTTTAAAATTCGATAA------------------------------------------ATCATCC-CGTTATGT-TTTTATCG
droVir3 scaffold_12942:29765-30004 + A----------------G-----------AGGCAGAACGAAGCATCTCCGACCCCATAA--AGTATATATATTCTTGATCAGCACCAATAGCCGAATCGATCTAGCCATGTCCGTCTGTCTGTCTGTCCGTCTGT-CCGTATGTATGAACGCAAG--GATC--TCAGAACCTATAAGAGCTAGAGACTTGA--TTTTTG-AATTTAGATGTAGGTGCTCCTAGTGCCTGCGCAG--ATCGAGTTTGTTTCCG-------------------------------------------------ATAACTTACTC-CGTTTTCAA-TCAATCG
droGri2 scaffold_15110:17417543-17417776 + --------------------------------------GAAGCATCTCCGACCCAATAAAATATATATATATTCTTGATCAGGGTCAAAAGCCGTGTCGATATAGCCATGTCCGCCTGTCCGTCTGTCCGTCTGTTTCGACTGTATGAACACGCA--GATC--TCAGAGACTATAAGAGCTAGAGACTTCA--AATTTGGAATATGGATTCTC------GTATACCAGGGGCAG--ATCAAGTTTGCTTTAT----TTGATCG--------------------------------------ATAACTGCCTCAGGTTCTCGA--TTATCG
droWil2 scf2_1100000004558:2493230-2493462 + TACACCCATAGGGCCAAAATGTATGTAACAGGCAGAAGAAAGCATTTCCGATCCCATAA--AGTATATATATTGTTGATCAGCATCAAGAGCCGAGACGAT-----CATGTCCGTCCGTCCGTCCATCCGT-----CCGTCCGTATGAACACCTA--GATC--TCGCAGACTATAAGAGCTAGAGGCACCA--AATTTGATATGTAGTCTCGT------GTACTGTGCA--CAGTTATCGAGTTTGATTCAAACTTT-----------------------------------------------------------------------TG
dp5 4_group4:4552580-4552782 - ----------------------------------------------------CCCATAA--AGTATATATATTCTTGATCAGCATCAATAGCCGAGTCGATTGAGCCATGTCTGTCTGTCCGTCCGTCCGTCTGT-CCGTCCCCTTCAGCGCCTA--ATGC--TCAAAGACTATAAGAGCTAGAGCAACGA--TGTTTTAGATTCAGACTTCTGTGATATGTCACTGAGACCGA--GACGAGTTTGTTTCAAAATTTCGGCACACC----------------------------------------------------------------
droPer2 scaffold_72:217645-217829 - --------------------------------------CATAC---------------------ACGTATATTCTTAATCAGAATCAATATCCGAGTCGACTGAGCCATGTCTGTCTGTCCGTCGGTCCGCCTGT-CCGTCTCTATGAGCGCCTA--GTGC--TCAAAGACTATAAGAGCTAGAGCAACGA--TATTTTTTATCCGGACATCT------GTGATATGTCACTGT--TACAAGTATATTTTAAAACTTC-----------------------------------------------------------------------G
droAna3 scaffold_13337:18800932-18800981 + CACACAGATCACTCTGAACCAAAT-----------CACTTAGCCCCCTTGTTTTCCTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAG
droBip1 scf7180000395621:26024-26171 - --------------------------------------GAGACATCTCCGACCCTATAA--AGTATATATATTCTTGATCAGGATCACCTCCTGAGTTGATATGAGCATGTCCGTCTGTCCGTCTGTCCGTCTGT-CTGTCTGTTTCTACGCGAACTAGTCTCTCA---GTTTTAAAAGCTAGCGACTTGA--A----------------------------------------------------------------------------------------------------------------------------------------
droKik1 scf7180000302707:12258-12304 + CTGTCCGT---------------------------------------------------------------------------------------------------CTGTCCGTCTGTCTGTCTGTCCGTCTGT-------------CCGTC------TG--TCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------G
droFic1 scf7180000454038:1020268-1020320 - CACACTGATCATTCTGAACCTAAC-----------AAGTCGGCTCCACTATTTTCATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGGTA
droEle1 scf7180000491301:7326-7526 - ---------------------------------------------------------------TATATATATTCTTGATCAGGATAAATACCCGAGTCTTTCTAGCCATGTCCGTCTGTCGGTCTGTCTGTCTGT-CCGTCTGTATGAACGTCGA--GATC--TCGGAAAATATAAAAGCTATAGATTTG----------------------------------------------------TTTATTTTAAAACGAAGCCAGGCCCACTCTAACGTCCACTCTGACACATGTTAGATCCTATGACTC--------TATGT-GTGTATAG
droRho1 scf7180000779910:2539-2759 + --------------------------------------GAAGCGTTTCCGACCCTATAA--AGTATATATATTCTTGATCAGGGTCACTAGCCGAGTCGATATAGCCATGTCCGTCTGTCCGTC--------TCT-CCGTCCGTATGAACGCTGA--GATC--TCGGAAACTATAAAAGCTAGAAGATTGA--CATTTTGCATGTAGATTTTA------GAAGTTCCTACGCAG--CGCAAGTTTGTTTTAAAAC--------GCCCACA-----------------------------------ATCGCTT-ATATAC-GAT-TTTAAA
droBia1 scf7180000301296:519-704 - --------------------------------------GAAGCGTTTCCGACCCCGTAA--AGTATATATATTTTTTATCAGGACTA---ACCGAGTCGATAAGGCCATGTCCGTCTGTCCGT-------------CCGTCTGTATGAACGCTGA--GATC--TCGGAAACTATAAGAGCTAGAATATTCA--TACTTGGCATGCAGATTTCT------GGTC---------CG--CGAAAAT-------------CTGTTGCGCCTAC---------------------------------------------------TG-TTTTTAT
droTak1 scf7180000414529:7307-7542 + --------------------------------------GAAGCATTTCCTACCCTATAA--AGTATATATATTCTTGATCAGGGTCACTAGCCAAGTCGATATAGCCATGTCCGTCTGTCCGTCTGTTTGTCTGT-CCGTCCGTATTAACGCTGA--GATC--TCGGAAACTATAAAAGCTAGAAAATTGA--CATTTTGCATGCAGATTCTA------GGAGTTCCTACGCAG--CGCAAGTTTGTTTCAAAACTTCGGCTGGCCGAAGTTAA-------------------------------CTTCCT----TTCTG----GTTTTA
droEug1 scf7180000409074:2365-2552 + --------------------------------------GAAGCGTTTCCGACCCTATAA--AGTATACATATTCTTGATCAGGATGAATAGCGAAGACGATTGAGCCATGTCCGTCCGTCTGTCCATCTGTCCGT-CTGTCCGTTTGAACGCTGA--GATC--TCAGGAACTATAAGAAATACAAAATTAA--AATTAATCATGAGGATTTTT------GAGGTCCCTATGCAG--CGCAAGT---------------------------------------------------------------------------------------
dm3 chrX:47729-47878 - --------------------------------------A---------------TATAG--TGTGTATATATTTTTGATCAGGATCAATAGCCGTGTCGATCTGGCCATGTCCGTCTGTCCGTCTGTCCGTCTGT-----CCGTCTGAACGCCTC--GATC--TCAGAATTTA---GAGACAGAGA-------------------------------------------CGCAC--TACAAGTTTGTTTTTAAATGTTGGTA--------------------------------------------------------------------
droSim2 3r:283600-283759 - --------------------------------------GAAGCGCATCCGATCCTGTAC--AGTATATATATTCTTGGTCAGGACCACATGCCGAGACGATCTAGCCATGTCCATCTCTCTGTCC----GTCTGT-CCGTCCGTGTGAACGTCGT--AATC--TCCGGAACTATAGAAGATAAAAAGTTCA--GATTAGAAATT----------------------------------------AATTT-------------------------------------------------------------------------------TT
droSec2 scaffold_6:422118-422257 - --------------------------------------GAAGCGCATCCGATCCTGTAA--AGTATATATATTCTTGGTCAGGACCACATGCCGAGACGATCTAGCCATGTCCATCTCTCTGTCC----GTCTGT-CCGTCCGTGTGAACGTCGT--AATC--TCCGGAACTATAGAAGCTAAAAAGTT---------------------------------------------------------------------------------------------------------------------------------------------
droYak3 2L:20845584-20845825 - TATACTGGTTACTCGTAG-----------AGGCAGAAGGAAGCGCTTCTGACCATATAA--AGTATATATATTCTTGATCAGGATCAATAGCCGAGTCGATATGACCATGTCCGTCTGTCTGT-------------CCGTCCGTATGAACGCTGA--GATC--TCAGAAACTACAAAAGCTAGAAAGTTGA--GACTATGCATACAGACTCCAAAGACACAGACATAGACGTAG--CGCAAGTTTGTTGATTCATGTTGCCATGCCCACT------------------------------------------------------CTAAGG
droEre2 scaffold_4845:2535239-2535451 + --------------------------------------TTT----------CCATATAA--AGTAAATATATTCTTGATAAGGATCAATAGCCGAGTCGAACTGCCCATGTCCGTCTGTCCGTCCGTCCGTCTGT-----CCGTATGAACGCCTC--GTTC--TCAGGAAATACAAAAGCTAGAATGTTGA--GATTAAGCATGCAGCTTCCA------GAGACATAGACACAA--CACAAGTTTATTTCCAAATGTTGGCACGCCCACTCTAA--------------------------------------------C-A---ATTTTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
CACACCGATCACTCCGAGATGAAT-----------CACGAAGCACCGCTATTCTCATACA-GGTATATATGATGTTTTTCAGGGCGACGAGCTGC--CGAG------CTGTCCGTCTGTCTGTCTGTCCGTCTGT-CCGTATGTTTGAACGCGTC--GATT--TCCGAAGATATAAGAGCTAGAGACTTCAATTATTTTTTAAATGAC----C------GTATATACAGCGCAGATGTCGAGTTTGCTTTTAAAATTCGATAA------------------------------------------ATCATCC-CGTTATGT-TTTTATCGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................T-----------CACGAAGCACCGCTATTCTCA..................................................................................................................................................................................................................................................................................2220.501100000
.................GATGAAT-----------CACGAAGCACCGCTATT......................................................................................................................................................................................................................................................................................2420.501000001
....................GAAT-----------CACGAAGCACCGCTATT......................................................................................................................................................................................................................................................................................2120.501100000
...........CTCCGAGATGAAT-----------CACGAAGCACCGC..........................................................................................................................................................................................................................................................................................2620.501100000
....................................................................................................................................................................................................................C------GTATATACAGCGCAGATGTCGA.........................................................................................2340.251000001
.........................................................................................................................................................................................................................................................TTAAAATTCGATAA------------------------------------------ATCATCC-CGTT.............25200.102200000
......................................................................................................................................T-CCGTATGTTTGAACGCGTC--GA...........................................................................................................................................................................22200.102200000
........................................................................................................................................................................AGATATAAGAGCTAGAGACTTCAATT........................................................................................................................................26200.051000010
..................................................................................................................................................................................................................................................TTTGCTTTTAAAATTCGATAA------------------------------------------ATCATC...................27200.051100000
......................................................................................................................TCTGTCTGTCCGTCTGT-CCGT..............................................................................................................................................................................................21200.051000010
..........................................................................................................................................................C--GATT--TCCGAAGATATAAGAGCTAG...................................................................................................................................................25200.051100000
...............................................................................................................................................TTTGAACGCGTC--GATT--TCCGAAG................................................................................................................................................................23200.051100000
...........................................................................................................................................TATGTTTGAACGCGTC--GATT--TCCGAAGA...............................................................................................................................................................28200.051000001
..............................................................................................................................................................................................................................................................ATTCGATAA------------------------------------------ATCATCC-CGTTATGT-T.......25200.051100000
.......................................................................................................................................................................AAGATATAAGAGCTAGAGACTTCAAT.........................................................................................................................................26200.051010000
.................................................................................................................................................TGAACGCGTC--GATT--TCCGAAG................................................................................................................................................................21200.051100000
.....................................................................................................................................................CGCGTC--GATT--TCCGAAGAT..............................................................................................................................................................19200.051100000
..................................................................................................................................TCTGT-CCGTATGTTTGAACG...................................................................................................................................................................................20200.051100000
.................................................................................................................GTCTGTCTGTCTGTCCGTCTG....................................................................................................................................................................................................21200.051000001
droVir3
A----------------G-----------AGGCAGAACGAAGCATCTCCGACCCCATAA--AGTATATATATTCTTGATCAGCACCAATAGCCGAATCGATCTAGCCATGTCCGTCTGTCTGTCTGTCCGTCTGT-CCGTATGTATGAACGCAAG--GATC--TCAGAACCTATAAGAGCTAGAGACTTGA--TTTTTG-AATTTAGATGTAGGTGCTCCTAGTGCCTGCGCAG--ATCGAGTTTGTTTCCG-------------------------------------------------ATAACTTACTC-CGTTTTCAA-TCAATCGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................................................................................................................................................................................GAGACTTGA--TTTTTG-AATTTAGATGT.......................................................................................................................2617.007000000002000000000000000000001000040000000000000000000000000000
....................................................................................................................................................................................TAGAGACTTGA--TTTTTG-AATTTAGA..........................................................................................................................2515.005000000002000000000000000100000000020000000000000000000000000000
....................................................................................................................................................................................TAGAGACTTGA--TTTTTG-AATTTAGATG........................................................................................................................2713.003000000000000000000000000010001000010000000000000000000000000000
......................................................................................................................................................................................GAGACTTGA--TTTTTG-AATTTAGA..........................................................................................................................2313.003000000000000000000000000000000000030000000000000000000000000000
......................................................................................................................................................................................GAGACTTGA--TTTTTG-AATTTAGAT.........................................................................................................................2412.002000000000000000000000000010000000010000000000000000000000000000
....................................................................................................................................................................................TAGAGACTTGA--TTTTTG-AATTTAGAT.........................................................................................................................2612.002000000000000000000000000000000000020000000000000000000000000000
......................................................................................................................................................................................................................................................TTTCCG-------------------------------------------------ATAACTTACTC-CGTTTTC..........2420.501000000000000000000000000000010000000000000000000000000000000000
....................................................................ATATTCTTGATCAGCACCAATAGC..............................................................................................................................................................................................................................................24200.50100000000000000000000000000010000000000000000000000000000000000000
...................................................................TATATTCTTGATCAGCACCAATAGC..............................................................................................................................................................................................................................................25200.408000000000000000000000000000000000080000000000000000000000000000
.........................................................................................................................................................................................................................TCCTAGTGCCTGCGCAG--ATCGAG........................................................................................23200.357006000000000000000000000000000000000001000000000000000000000000
..............................................................................................................................................................ATC--TCAGAACCTATAAGAGCT.....................................................................................................................................................21200.357000007000000000000000000000000000000000000000000000000000000000
....................................................................ATATTCTTGATCAGCACCAATAG...............................................................................................................................................................................................................................................23200.306000000000000000000000000000300003000000000000000000000000000000
...........................................................................................................................................TATGTATGAACGCAAG--GATC--TCAGAAC................................................................................................................................................................27200.255005000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................ATCGAGTTTGTTTCCG-------------------------------------------------ATAACTTACT...................2650.201000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................ATGTATGAACGCAAG--GATC--TCAGAACC...............................................................................................................................................................27200.204004000000000000000000000000000000000000000000000000000000000000
....................................................................ATATTCTTGATCAGCACCAATA................................................................................................................................................................................................................................................22200.204000000000000000000000000000040000000000000000000000000000000000
....................................................................ATATTCTTGATCAGCACCAATAGCC.............................................................................................................................................................................................................................................25200.204000000000000000000000000000000000000400000000000000000000000000
...............................................................................................................................................................................................................................TGCCTGCGCAG--ATCGAGTTTGTTTCC...............................................................................26200.153003000000000000000000000000000000000000000000000000000000000000
.....................................................................TATTCTTGATCAGCACCAATAGCC.............................................................................................................................................................................................................................................24200.153000000300000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................GCCTGCGCAG--ATCGAGTTTGT...................................................................................21200.153000000003000000000000000000000000000000000000000000000000000000
....................................................................ATATTCTTGATCAGCACCAATAGCCG............................................................................................................................................................................................................................................26200.153000000200000000000000000000000010000000000000000000000000000000
......................................................................................................................................................................................................................................................TTTCCG-------------------------------------------------ATAACTTACTC-CGTTT............2270.141000000000000000000000000000000100000000000000000000000000000000
......................................................................................................................................................................................................................................................TTTCCG-------------------------------------------------ATAACTTACTC-CG...............1970.141000000000000000000000000000010000000000000000000000000000000000
.............................AGGCAGAACGAAGCATCTCCGACCC....................................................................................................................................................................................................................................................................................2590.111000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................TATGTATGAACGCAAG--GATC--.......................................................................................................................................................................20200.102000000200000000000000000000000000000000000000000000000000000000
.......................................................................TTCTTGATCAGCACCAATAGCCG............................................................................................................................................................................................................................................23200.102000000000000000000000000000000001100000000000000000000000000000
...........................................................................................................................................................................................................TTAGATGTAGGTGCTCCTAGTGC........................................................................................................23200.102000000000000000000000000000000000000000200000000000000000000000
..........................................................................................................................................................................................................................CCTAGTGCCTGCGCAG--ATCGAGTTTGT...................................................................................27200.102000000000000000000000000000000000020000000000000000000000000000
..........................................................................................................................................GTATGTATGAACGCAAG--GATC--TCAGAAC................................................................................................................................................................28200.102000000000000000000000000000002000000000000000000000000000000000
.........................................................................................................................................................................................................................TCCTAGTGCCTGCGCAG--ATCGAGTTTGT...................................................................................28200.102001000000000000000000000000000100000000000000000000000000000000
.........................................................................................................................................................................................................................TCCTAGTGCCTGCGCAG--ATCGAGTTTG....................................................................................27200.102000000002000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................CCTGCGCAG--ATCGAGTTTGTTTCCG-------------------------------------------------A............................26200.102000000002000000000000000000000000000000000000000000000000000000
........................................................................TCTTGATCAGCACCAATAGCCG............................................................................................................................................................................................................................................22200.102000000000000000000000000000000000020000000000000000000000000000
............................................................................................................................................................................................................TAGATGTAGGTGCTCCTAGTGCCT......................................................................................................24200.102000000010000000000000000000000000010000000000000000000000000000
.......................................................................TTCTTGATCAGCACCAATAGC..............................................................................................................................................................................................................................................21200.102000000000000000000000000000000000000002000000000000000000000000
...................................................................TATATTCTTGATCAGCACCAAT.................................................................................................................................................................................................................................................22200.102000001000000000000000000000000010000000000000000000000000000000
....................................................................ATATTCTTGATCAGCACCAATAGCCGA...........................................................................................................................................................................................................................................27200.102000000000000000000000000100010000000000000000000000000000000000
.....................................................................TATTCTTGATCAGCACCAATA................................................................................................................................................................................................................................................21200.102000020000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................GAACGCAAG--GATC--TCAGAACCTATAAGAGCT.....................................................................................................................................................31200.102000000000000000000000000000000000000000000000200000000000000000
...........................................................................................................................................................................................................TTAGATGTAGGTGCTCCTAGTGCCTG.....................................................................................................26200.102001000000000000000000000000000100000000000000000000000000000000
..........................................................................................................................................................................................................TTTAGATGTAGGTGCTCCTAGTGC........................................................................................................24200.102000000000000000000000000000000000020000000000000000000000000000
..............................................................................TCAGCACCAATAGCCGAATCGATCTAG.................................................................................................................................................................................................................................27110.091000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................................ATCGAGTTTGTTTCCG-------------------------------------------------ATAACTA......................23110.091000000000000000000000000000001000000000000000000000000000000000
........................................................................TCTTGATCAGCACCAATAGCCGAATCGA......................................................................................................................................................................................................................................28110.091000000000000000000000000000000000010000000000000000000000000000
.......................................................................TTCTTGATCAGCACCAATAGCCGAAT.........................................................................................................................................................................................................................................26120.081000000000000000000000000010000000000000000000000000000000000000
.........................................................................................................................................................................CCTATAAGAGCTAGAGACTTGA--TT.......................................................................................................................................24120.081000000000000000000000000000000000000001000000000000000000000000
.........................................................................................................................................................................CCTATAAGAGCTAGAGACTTGA--TTT......................................................................................................................................25120.081000000000000000000000000010000000000000000000000000000000000000
...............................GCAGAACGAAGCATCTCCGA.......................................................................................................................................................................................................................................................................................20130.081000000000000000000000000000000000000000100000000000000000000000
....................................................................................CCAATAGCCGAATCGATCTAGCCATGTC..........................................................................................................................................................................................................................28140.071000000001000000000000000000000000000000000000000000000000000000
....................................................................ATATTCTTGATCAGCACCAATAGCCGAA..........................................................................................................................................................................................................................................28140.071000000000000000000000000000000001000000000000000000000000000000
.............................AGGCAGAACGAAGCATCTCCG........................................................................................................................................................................................................................................................................................21140.071000000000000000000000000000010000000000000000000000000000000000
.......................................................................TTCTTGATCAGCACCAATAGCCGAA..........................................................................................................................................................................................................................................25140.071000000000000000000000000000000000010000000000000000000000000000
........................................................................TCTTGATCAGCACCAATAGCCGAA..........................................................................................................................................................................................................................................24140.071000000000000000000001000000000000000000000000000000000000000000
.............................................................AGTATATATATTCTTGATCAGCACCAAT.................................................................................................................................................................................................................................................28200.051000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................TGT-CCGTATGTATGAACGCAAG--GATC--.......................................................................................................................................................................26200.051001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................ATTTAGATGTAGGTGCTCCTAGT..........................................................................................................23200.051000000000000000000000000000000000000000000000000000000000000001
............................................................................................................................................ATGTATGAACGCAAG--GATC--TC.....................................................................................................................................................................21200.051000010000000000000000000000000000000000000000000000000000000000
..................................................................ATATATTCTTGATCAGCACCAATAGCC.............................................................................................................................................................................................................................................27200.051000000000000000000000000000000000000000100000000000000000000000
..........................................CATCTCCGACCCCATAA--AGTATAT......................................................................................................................................................................................................................................................................24200.051000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................CCATGTCCGTCTGTCTGTCT.............................................................................................................................................................................................................20200.051010000000000000000000000000000000000000000000000000000000000000
...................................................................TATATTCTTGATCAGCACCAATAGCC.............................................................................................................................................................................................................................................26200.051000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................TAGATGTAGGTGCTCCTAGTGCC.......................................................................................................23200.051000000000000000000000000001000000000000000000000000000000000000
........................................................................................................................................................................................................................CTCCTAGTGCCTGCGCAG--ATCGAGT.......................................................................................25200.051000000000000000000000000000000000001000000000000000000000000000
...............................................................................................................................................................................................................................TGCCTGCGCAG--ATCGAGTTTG....................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................G--GATC--TCAGAACCTATAAGAGCTAGAG.................................................................................................................................................27200.051000000000000000000000000000010000000000000000000000000000000000
.................................................................TATATATTCTTGATCAGCACCAATAGCC.............................................................................................................................................................................................................................................28200.051000000000000000000000000010000000000000000000000000000000000000
...................................................................TATATTCTTGATCAGCACCAATAG...............................................................................................................................................................................................................................................24200.051000001000000000000000000000000000000000000000000000000000000000
..........................................................................................GCCGAATCGATCTAGCCATGT...........................................................................................................................................................................................................................21200.051000000000000000000000010000000000000000000000000000000000000000
.......................................................ATAA--AGTATATATATTCTTGATCAGC.......................................................................................................................................................................................................................................................26200.051000000000000000000000000000000100000000000000000000000000000000
........................................................................TCTTGATCAGCACCAATAGCCGA...........................................................................................................................................................................................................................................23200.051000000000000000000000000100000000000000000000000000000000000000
.............................................................................................................................................TGTATGAACGCAAG--GATC--TCAG...................................................................................................................................................................22200.051000000000000000000000000000000000000000100000000000000000000000
.........................................................................................................................................................................................................................TCCTAGTGCCTGCGCAG--ATCG..........................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................CGCAG--ATCGAGTTTGTTTCCG-------------------------------------------------.............................21200.051000000000000000000000000100000000000000000000000000000000000000
...................................................................TATATTCTTGATCAGCACC....................................................................................................................................................................................................................................................19200.051000010000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................GCAAG--GATC--TCAGAACCTATAAGAGC......................................................................................................................................................26200.051001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................TGTCCGTCTGT-CCGTATGTA.........................................................................................................................................................................................20200.051000000000000000000000000001000000000000000000000000000000000000
.........................................................................................................................................................................................................ATTTAGATGTAGGTGCTCCTAGTGC........................................................................................................25200.051000000001000000000000000000000000000000000000000000000000000000
........................................................TAA--AGTATATATATTCTTGATCAGCA......................................................................................................................................................................................................................................................26200.051000000000000000000000000010000000000000000000000000000000000000
............................................................................................................................................................................................................................TAGTGCCTGCGCAG--ATCGAGTTTGT...................................................................................25200.051000000000000000000000000100000000000000000000000000000000000000
...................................................................TATATTCTTGATCAGCACCAATAGCCG............................................................................................................................................................................................................................................27200.051000000000000000000000000000000010000000000000000000000000000000
...................................................................................................................................................................................................................................TGCGCAG--ATCGAGTTTGTTTCCG-------------------------------------------------A............................24200.051000000000000000000000000000010000000000000000000000000000000000
...........................................................................................................ATGTCCGTCTGTCTGTCTGTC..........................................................................................................................................................................................................21200.051000000000000000000000001000000000000000000000000000000000000000
.......................................................................TTCTTGATCAGCACCAATAGCC.............................................................................................................................................................................................................................................22200.051000100000000000000000000000000000000000000000000000000000000000
......................................................................................................TAGCCATGTCCGTCTGTCTGT...............................................................................................................................................................................................................21200.051000001000000000000000000000000000000000000000000000000000000000
......................................................CATAA--AGTATATATATTCTTG.............................................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
.........................................................................CTTGATCAGCACCAATAGCCGA...........................................................................................................................................................................................................................................22200.051000000000000000000001000000000000000000000000000000000000000000
........................................................TAA--AGTATATATATTCTTGATCAGCAC.....................................................................................................................................................................................................................................................27200.051000000000000000000000000000010000000000000000000000000000000000
...............................................................................................................CCGTCTGTCTGTCTGTCCG........................................................................................................................................................................................................19200.051000000000000000000000001000000000000000000000000000000000000000
................................................................................................TCGATCTAGCCATGTCCGTC......................................................................................................................................................................................................................20200.051000000000000000000000000000000000100000000000000000000000000000
............................................................................................................................TGTCCGTCTGT-CCGTATGT..........................................................................................................................................................................................19200.051000010000000000000000000000000000000000000000000000000000000000
............................................................................................................................................ATGTATGAACGCAAG--GATC--TCA....................................................................................................................................................................22200.051000000000000000000001000000000000000000000000000000000000000000
................................................................................................TCGATCTAGCCATGTCCGTCT.....................................................................................................................................................................................................................21200.051000000000000000000000000000000000000000000000000000000000000010
................................................................ATATATATTCTTGATCAGCACCAAT.................................................................................................................................................................................................................................................25200.051000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................CCTGCGCAG--ATCGAGTTTGTT..................................................................................21200.051000000000000000000000000000010000000000000000000000000000000000
...............................................................................................ATCGATCTAGCCATGTCCGTCTGT...................................................................................................................................................................................................................24200.051000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................TTTAGATGTAGGTGCTCCTAGTGCCTG.....................................................................................................27200.051000000000000000000000000000000100000000000000000000000000000000
........................................................................................................................................................................................................................CTCCTAGTGCCTGCGCAG--ATCG..........................................................................................22200.051000000000000000000000000000000100000000000000000000000000000000
...................................................................................................................................................................TCAGAACCTATAAGAGCTAGAGA................................................................................................................................................23200.051000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................TCTGTCTGTCCGTCTGT-CCGTATGTA.........................................................................................................................................................................................26200.051001000000000000000000000000000000000000000000000000000000000000
.....................................................................................CAATAGCCGAATCGATCTAGC................................................................................................................................................................................................................................21200.051010000000000000000000000000000000000000000000000000000000000000
...............................................................................................ATCGATCTAGCCATGTCCGTC......................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................TTAGATGTAGGTGCTCCTAGTGCC.......................................................................................................24200.051000010000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................TGCGCAG--ATCGAGTTTGTT..................................................................................19200.051000000100000000000000000000000000000000000000000000000000000000
.......................................................................TTCTTGATCAGCACCAATAGCCGA...........................................................................................................................................................................................................................................24200.051000000000000000000001000000000000000000000000000000000000000000
....................................................................................................................................TGT-CCGTATGTATGAACGCA.................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................ATGTATGAACGCAAG--GATC--T......................................................................................................................................................................20200.051000000000000000000100000000000000000000000000000000000000000000
droGri2
--------------------------------------GAAGCATCTCCGACCCAATAAAATATATATATATTCTTGATCAGGGTCAAAAGCCGTGTCGATATAGCCATGTCCGCCTGTCCGTCTGTCCGTCTGTTTCGACTGTATGAACACGCA--GATC--TCAGAGACTATAAGAGCTAGAGACTTCA--AATTTGGAATATGGATTCTC------GTATACCAGGGGCAG--ATCAAGTTTGCTTTAT----TTGATCG--------------------------------------ATAACTGCCTCAGGTTCTCGA--TTATCGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
TACACCCATAGGGCCAAAATGTATGTAACAGGCAGAAGAAAGCATTTCCGATCCCATAA--AGTATATATATTGTTGATCAGCATCAAGAGCCGAGACGAT-----CATGTCCGTCCGTCCGTCCATCCGT-----CCGTCCGTATGAACACCTA--GATC--TCGCAGACTATAAGAGCTAGAGGCACCA--AATTTGATATGTAGTCTCGT------GTACTGTGCA--CAGTTATCGAGTTTGATTCAAACTTT-----------------------------------------------------------------------TGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................TGTATGTAACAGGCAGAAGAAAGCA..............................................................................................................................................................................................................................................................................................25200.40800080
....................................................................................................T-----CATGTCCGTCCGTCCGTCC.............................................................................................................................................................................................................20200.10200020
....................GTATGTAACAGGCAGAAGAA..................................................................................................................................................................................................................................................................................................20200.05100100
................................................................................................................CGTCCGTCCGTCCATCCGT-----CCGTCCG...........................................................................................................................................................................................26200.05100010
................................................................................................................................CGT-----CCGTCCGTATGAACACCTA--GA...........................................................................................................................................................................24200.05100010
dp5
----------------------------------------------------CCCATAA--AGTATATATATTCTTGATCAGCATCAATAGCCGAGTCGATTGAGCCATGTCTGTCTGTCCGTCCGTCCGTCTGT-CCGTCCCCTTCAGCGCCTA--ATGC--TCAAAGACTATAAGAGCTAGAGCAACGA--TGTTTTAGATTCAGACTTCTGTGATATGTCACTGAGACCGA--GACGAGTTTGTTTCAAAATTTCGGCACACC----------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................................................................................................................ACTTCTGTGATATGTCACTGAGACCGA--..............................................................................................27128.002801910000800
...............................................................................................................................................................................................................ACTTCTGTGATATGTCACTGAGACCG.................................................................................................26124.002402400000000
.................................................................................................................................................................................................................TTCTGTGATATGTCACTGAGACCGA--GA............................................................................................27123.002302210000000
...............................................................................................................................................................................................................ACTTCTGTGATATGTCACTGAGACC..................................................................................................25120.002001460000000
.................................................................................................................................................................................................................TTCTGTGATATGTCACTGAGACCGA--..............................................................................................25110.001001000000000
....................................................................................................................................................................................................................TGTGATATGTCACTGAGACCGA--GACG..........................................................................................2619.0090000000900
..........................................................................TTGATCAGCATCAATAGCCG............................................................................................................................................................................................................................................20207.45149014900000000
...............................................................................................................................................................................................................ACTTCTGTGATATGTCACTGAGA....................................................................................................2317.0070600000100
...............................................................................................................................................................................................................ACTTCTGTGATATGTCACTGAGAC...................................................................................................2417.0070100000510
.................................................................................................................................................................................................................TTCTGTGATATGTCACTGAGACCGA--G.............................................................................................2616.0060600000000
.................................................................................................................................................................................................................TTCTGTGATATGTCACTGAGACCG.................................................................................................2414.0040400000000
..................................................................................................................................................................................................................TCTGTGATATGTCACTGAGACCGA--..............................................................................................2413.0030300000000
................................................................................................................................................................................................................CTTCTGTGATATGTCACTGAGACCGA--..............................................................................................2613.0030300000000
.........................................................................................................................................................................................................................TATGTCACTGAGACCGA--GACGAGTT......................................................................................2513.0030210000000
..................................................................................................................................................................................................................TCTGTGATATGTCACTGAGACCG.................................................................................................2313.0030300000000
..................................................................................................................................................................................................................TCTGTGATATGTCACTGAGACCGA--G.............................................................................................2513.0030300000000
......................................................................................................................................................................................................................TGATATGTCACTGAGACCGA--GACGA.........................................................................................2512.0020200000000
....................................................................................................................................................................................................................TGTGATATGTCACTGAGACCGA--GA............................................................................................2412.0020100000100
...............................................................................................................................................................................................................ACTTCTGTGATATGTCACTGAG.....................................................................................................2212.0020100100000
...............................................................................................................................................................................................................ACTTCTGTGATATGTCACTGAGACCGA--G.............................................................................................2812.0020200000000
...........................................................................................................................................................................................................TCAGACTTCTGTGATATGTCACTGAGA....................................................................................................2712.0020200000000
....................................................................................................................................................................................................................TGTGATATGTCACTGAGACCGA--GAC...........................................................................................2512.0020000000200
.................................................................................................................................................................................................................TTCTGTGATATGTCACTGAGACCGA--GAC...........................................................................................2812.0020200000000
...............................................................................................GTCGATTGAGCCATGTCTGTC......................................................................................................................................................................................................................21201.803603600000000
....................................................................................................................................................................................................TTTAGATTCAGACTTCTGTGATATG.............................................................................................................2521.5030000000300
..................................................................................................................................................................................................................TCTGTGATATGTCACTGAGACCGA--GA............................................................................................2611.0010100000000
.................................................................................................................................................................................................................TTCTGTGATATGTCACTGAGA....................................................................................................2111.0010100000000
................................................................................................................................................................................................................CTTCTGTGATATGTCACTGAGACC..................................................................................................2411.0010100000000
......................................................................................................................................................................................................................TGATATGTCACTGAGACCGA--GACGAG........................................................................................2611.0010100000000
....................................................................................................................................................................................................................TGTGATATGTCACTGAGACCGA--..............................................................................................2211.0010100000000
.............................................................................................................................................................................................................AGACTTCTGTGATATGTCACTGAGA....................................................................................................2511.0010100000000
.....................................................................................................................................................................................................................GTGATATGTCACTGAGACCGA--GAC...........................................................................................2411.0010100000000
...................................................................................................................................................................................................................CTGTGATATGTCACTGAGACCG.................................................................................................2211.0010100000000
....................................................................................................................................................................................................................TGTGATATGTCACTGAGACCGA--GACC..........................................................................................2611.0010000001000
..............................................................................................................................................................................................................GACTTCTGTGATATGTCACTGAGAC...................................................................................................2511.0010100000000
......................................................................................................................................................................................................................TGATATGTCACTGAGACCGA--GAC...........................................................................................2311.0010100000000
...............................................................................................................................................................................................................ACTTCTGTGATATGTCACTGAGAA...................................................................................................2411.0010100000000
.................................................................................................................................................................................................................TTCTGTGATATGTCACTGAGAC...................................................................................................2211.0010100000000
...................................................................................................................................................................................................................CTGTGATATGTCACTGAGACCGA--GAC...........................................................................................2611.0010100000000
...................................................................................................................................................................................................................CTGTGATATGTCACTGAGACCGA--GA............................................................................................2511.0010100000000
.........................................................................................................................................................................................................................TATGTCACTGAGACCGA--GACGAGAA......................................................................................2511.0010100000000
..........................................................................TTGATCAGCATCAATAGCCGA...........................................................................................................................................................................................................................................21201.002000000020000
..................................................................................................................................................................................................................TCTGTGATATGTCACTGAGA....................................................................................................2011.0010100000000
................................................................................................................................................................................................................CTTCTGTGATATGTCACTGAGACCG.................................................................................................2511.0010100000000
......................................................................................................................................................................................................................TGATATGTCACTGAGACCGA--GACG..........................................................................................2411.0010100000000
................................................................................................................................................................................................................CTTCTGTGATATGTCACTGAGAC...................................................................................................2311.0010100000000
............................................................................................................................................................................................................CAGACTTCTGTGATATGTCACTGAGA....................................................................................................2611.0010100000000
...............................................................................................................................................................................................................ACTTCTGTGATATGTCACTGA......................................................................................................2170.7150410000000
.......................................................................................................AGCCATGTCTGTCTGTCCGTC..............................................................................................................................................................................................................21200.601201200000000
....................................................................................................................................................................................................TTTAGATTCAGACTTCTGTGATA...............................................................................................................2320.5010100000000
.................................................................................................................................................................................................TGTTTTAGATTCAGACTTCTGTGATA...............................................................................................................2620.5010010000000
.....................................................................................................................................................................................................TTAGATTCAGACTTCTGTGATATG.............................................................................................................2420.5010000000100
...................................................................................................................................................................................................TTTTAGATTCAGACTTCTGTGATA...............................................................................................................2420.5010000000100
.................................................................................................................................................................................................TGTTTTAGATTCAGACTTCTGTGAA................................................................................................................2520.5010100000000
....................................................................................TCAATAGCCGAGTCGATTGAGCCATG............................................................................................................................................................................................................................26200.3570700000000
..................................................................................................................................................................................................................................................TTTGTTTCAAAATTTCGGCACACC----------------------------------------------------------------2430.3310010000000
..........................................................................................................CATGTCTGTCTGTCCGTCCGT...........................................................................................................................................................................................................21200.2550500000000
................................................................................................................................................................................................................CTTCTGTGATATGTCACTGA......................................................................................................2090.2220200000000
..............................................................................................................................................CCTTCAGCGCCTA--ATGC--TCAA...................................................................................................................................................................21200.2040400000000
..........................................................................................................................................................................CTATAAGAGCTAGAGCAACGA--TG.......................................................................................................................................23200.1530300000000
.........................................................................................................................................................................................................ATTCAGACTTCTGTGATATGTCACT........................................................................................................2590.1110100000000
.................................................................................................................................................................................................................TTCTGTGATATGTCACTGA......................................................................................................1990.1110100000000
.........................................................................CTTGATCAGCATCAATAGCCGAGTCGA......................................................................................................................................................................................................................................27200.1020000000020
......................................................................ATTCTTGATCAGCATCAATAGCCGAG..........................................................................................................................................................................................................................................26200.1020000000200
.....................................................................................................................................................................AAAGACTATAAGAGCTAGAGCA...............................................................................................................................................22200.1020000002000
...................................................................................................................................................................TCAAAGACTATAAGAGCTAGAGCA...............................................................................................................................................24200.1020020000000
..................................................................................................................................................CAGCGCCTA--ATGC--TCAAAGACTATA...........................................................................................................................................................25200.1020200000000
..............................................................................................................TCTGTCTGTCCGTCCGTCCG........................................................................................................................................................................................................20200.1020000000020
...................................................................TATATTCTTGATCAGCATCA...................................................................................................................................................................................................................................................20200.1020000000020
...............................................................................................................................................................................................................ACTTCTGTGATATGTCACTGAGAAA..................................................................................................25150.0710100000000
............................................................................................................................................................................................................CAGACTTCTGTGATATGTCAC.........................................................................................................21200.0510000010000
............................................................................................................TGTCTGTCTGTCCGTCCGTCCGTCTG....................................................................................................................................................................................................26200.0510000000010
..................................................................................................GATTGAGCCATGTCTGTCTGTCCGT...............................................................................................................................................................................................................25200.0510100000000
.....................................................................................................TGAGCCATGTCTGTCTGTCCGT...............................................................................................................................................................................................................22200.0510010000000
............................................................................................................................................CCCCTTCAGCGCCTA--ATGC--T......................................................................................................................................................................20200.0510100000000
.........................................................................................................CCATGTCTGTCTGTCCGTCCGTCCG........................................................................................................................................................................................................25200.0510000000100
......................................................................................................................................................................AAGACTATAAGAGCTAGAGCAACGA--TC.......................................................................................................................................27200.0510010000000
....................................................................................................................................................................CAAAGACTATAAGAGCTAGAGCAACGA--TGTT.....................................................................................................................................31200.0510000000010
..........................................................................................GCCGAGTCGATTGAGCCATGTCTGTCT.....................................................................................................................................................................................................................27200.0510010000000
...........................................................................................CCGAGTCGATTGAGCCATGT...........................................................................................................................................................................................................................20200.0510000001000
...........................................................................................................................................TCCCCTTCAGCGCCTA--ATGC--.......................................................................................................................................................................20200.0510100000000
..........................................................................................................................................................................CTATAAGAGCTAGAGCAACGA--.........................................................................................................................................21200.0510001000000
..................................................................................................GATTGAGCCATGTCTGTC......................................................................................................................................................................................................................18200.0510100000000
......................................................................................AATAGCCGAGTCGATTGAGCCATGTCTG........................................................................................................................................................................................................................28200.0510100000000
........................................................................................................GCCATGTCTGTCTGTCCGTC..............................................................................................................................................................................................................20200.0510000001000
......................................................................................................GAGCCATGTCTGTCTGTCCGTCC.............................................................................................................................................................................................................23200.0510100000000
droPer2
--------------------------------------CATAC---------------------ACGTATATTCTTAATCAGAATCAATATCCGAGTCGACTGAGCCATGTCTGTCTGTCCGTCGGTCCGCCTGT-CCGTCTCTATGAGCGCCTA--GTGC--TCAAAGACTATAAGAGCTAGAGCAACGA--TATTTTTTATCCGGACATCT------GTGATATGTCACTGT--TACAAGTATATTTTAAAACTTC-----------------------------------------------------------------------GSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
....................................................................................................................................................................CAAAGACTATAAGAGCTAGA..................................................................................................................................................20200.051001000
.....................................................................................................................................................................AAAGACTATAAGAGCTAGAGCAACGA--TA.......................................................................................................................................28200.051010000
droAna3
CACACAGATCACTCTGAACCAAAT-----------CACTTAGCCCCCTTGTTTTCCTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
--------------------------------------GAGACATCTCCGACCCTATAA--AGTATATATATTCTTGATCAGGATCACCTCCTGAGTTGATATGAGCATGTCCGTCTGTCCGTCTGTCCGTCTGT-CTGTCTGTTTCTACGCGAACTAGTCTCTCA---GTTTTAAAAGCTAGCGACTTGA--A----------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
CTGTCCGT---------------------------------------------------------------------------------------------------CTGTCCGTCTGTCTGTCTGTCCGTCTGT-------------CCGTC------TG--TCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------GSizeHit CountTotal NormTotal
No Reads
droFic1
CACACTGATCATTCTGAACCTAAC-----------AAGTCGGCTCCACTATTTTCATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGGTASizeHit CountTotal NormTotal
No Reads
droEle1
---------------------------------------------------------------TATATATATTCTTGATCAGGATAAATACCCGAGTCTTTCTAGCCATGTCCGTCTGTCGGTCTGTCTGTCTGT-CCGTCTGTATGAACGTCGA--GATC--TCGGAAAATATAAAAGCTATAGATTTG----------------------------------------------------TTTATTTTAAAACGAAGCCAGGCCCACTCTAACGTCCACTCTGACACATGTTAGATCCTATGACTC--------TATGT-GTGTATAGSizeHit CountTotal NormTotal
No Reads
droRho1
--------------------------------------GAAGCGTTTCCGACCCTATAA--AGTATATATATTCTTGATCAGGGTCACTAGCCGAGTCGATATAGCCATGTCCGTCTGTCCGTC--------TCT-CCGTCCGTATGAACGCTGA--GATC--TCGGAAACTATAAAAGCTAGAAGATTGA--CATTTTGCATGTAGATTTTA------GAAGTTCCTACGCAG--CGCAAGTTTGTTTTAAAAC--------GCCCACA-----------------------------------ATCGCTT-ATATAC-GAT-TTTAAASizeHit CountTotal NormTotal
No Reads
droBia1
--------------------------------------GAAGCGTTTCCGACCCCGTAA--AGTATATATATTTTTTATCAGGACTA---ACCGAGTCGATAAGGCCATGTCCGTCTGTCCGT-------------CCGTCTGTATGAACGCTGA--GATC--TCGGAAACTATAAGAGCTAGAATATTCA--TACTTGGCATGCAGATTTCT------GGTC---------CG--CGAAAAT-------------CTGTTGCGCCTAC---------------------------------------------------TG-TTTTTATSizeHit CountTotal NormTotal
No Reads
droTak1
--------------------------------------GAAGCATTTCCTACCCTATAA--AGTATATATATTCTTGATCAGGGTCACTAGCCAAGTCGATATAGCCATGTCCGTCTGTCCGTCTGTTTGTCTGT-CCGTCCGTATTAACGCTGA--GATC--TCGGAAACTATAAAAGCTAGAAAATTGA--CATTTTGCATGCAGATTCTA------GGAGTTCCTACGCAG--CGCAAGTTTGTTTCAAAACTTCGGCTGGCCGAAGTTAA-------------------------------CTTCCT----TTCTG----GTTTTASizeHit CountTotal NormTotal
No Reads
droEug1
--------------------------------------GAAGCGTTTCCGACCCTATAA--AGTATACATATTCTTGATCAGGATGAATAGCGAAGACGATTGAGCCATGTCCGTCCGTCTGTCCATCTGTCCGT-CTGTCCGTTTGAACGCTGA--GATC--TCAGGAACTATAAGAAATACAAAATTAA--AATTAATCATGAGGATTTTT------GAGGTCCCTATGCAG--CGCAAGT---------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
--------------------------------------A---------------TATAG--TGTGTATATATTTTTGATCAGGATCAATAGCCGTGTCGATCTGGCCATGTCCGTCTGTCCGTCTGTCCGTCTGT-----CCGTCTGAACGCCTC--GATC--TCAGAATTTA---GAGACAGAGA-------------------------------------------CGCAC--TACAAGTTTGTTTTTAAATGTTGGTA--------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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................................................................................AGGATCAATAGCCGTGTCGG......................................................................................................................................................................................................................................20100.2020000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.....................................................................................CAATAGCCGTGTCGATCTGGC................................................................................................................................................................................................................................2150.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................ATATTTTTGATCAGGATCAAT.................................................................................................................................................................................................................................................21160.1930000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000100000000000000000000000000010000000000000000000000000000
............................................................................GATCAGGATCAATAGCCGTGTCGAA.....................................................................................................................................................................................................................................25170.1830000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................GATCAGGATCAATAGCCGTGTCGATA....................................................................................................................................................................................................................................26120.1720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................AATAGCCGTGTCGATCTGG.................................................................................................................................................................................................................................1960.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................TGTCCGTCTGTCCGTCTGTCC.........................................................................................................................................................................................................2160.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..................................................................ATATATTTTTGATCAGGATCAATAGCC.............................................................................................................................................................................................................................................27120.1720000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
......................................................................................AATAGCCGTGTCGATCTGGCC...............................................................................................................................................................................................................................2160.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
....................................................................................................................TGTCCGTCTGTCCGTCTGT-----CC............................................................................................................................................................................................2160.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.....................................................................TATTTTTGATCAGGATCAATAGCC.............................................................................................................................................................................................................................................24130.1520000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.............................................................................ATCAGGATCAATAGCCGTGTCGATA....................................................................................................................................................................................................................................25130.1520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000000000000000000000000
..........................................................................................................................TCTGTCCGTCTGT-----CCGTC.........................................................................................................................................................................................18130.1520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................ATCAGGATCAATAGCCGTGTCGT......................................................................................................................................................................................................................................23130.1520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................TCTGTCCGTCTGTCCGTC......................................................................................................................................................................................................18130.1520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................TCGATCTGGCCATGTCCGTCT.....................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000
.......................................................................TTTTTGATCAGGATCAATA................................................................................................................................................................................................................................................19200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................GTCGATCTGGCCATGTCCGTC......................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000020000000000000000000000000000
..........................................................................TTGATCAGGATCAATAGCCGTC..........................................................................................................................................................................................................................................22140.1420000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
--------------------------------------GAAGCGCATCCGATCCTGTAC--AGTATATATATTCTTGGTCAGGACCACATGCCGAGACGATCTAGCCATGTCCATCTCTCTGTCC----GTCTGT-CCGTCCGTGTGAACGTCGT--AATC--TCCGGAACTATAGAAGATAAAAAGTTCA--GATTAGAAATT----------------------------------------AATTT-------------------------------------------------------------------------------TTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............................................ATCCGATCCTGTAC--AGTA.........................................................................................................................................................................................................................................................................1812.00220000000000000000
...............................................................................CAGGACCACATGCCGAGACGATCTAGC................................................................................................................................................................................................................................2712.00200000020000000000
.............................................................................................................................................CGTGTGAACGTCGT--AATC--TCCG...................................................................................................................................................................2211.00100000000100000000
....................................................................................................................................................................CCGGAACTATAGAAGATAAAAA................................................................................................................................................2211.00100000000001000000
....................................................................................................................................................................CCGGAACTATAGAAGATA....................................................................................................................................................1811.00100000000001000000
..................................................................................................................................................GAACGTCGT--AATC--TCCGGAACTATAGA.........................................................................................................................................................2711.00100100000000000000
.................................................................TATATATTCTTGGTCAGGACCACATGC..............................................................................................................................................................................................................................................2711.00100000010000000000
.............................................................................................................................................................AATC--TCCGGAACTATAGAAGATAAAAA................................................................................................................................................2711.00100000000001000000
..........................................................................................................................................GTCCGTGTGAACGTCG................................................................................................................................................................................1690.11100000000001000000
..................................................................................................................TCTCTCTGTCC----GTCA.....................................................................................................................................................................................................15200.05100000000010000000
droSec2
--------------------------------------GAAGCGCATCCGATCCTGTAA--AGTATATATATTCTTGGTCAGGACCACATGCCGAGACGATCTAGCCATGTCCATCTCTCTGTCC----GTCTGT-CCGTCCGTGTGAACGTCGT--AATC--TCCGGAACTATAGAAGCTAAAAAGTT---------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
TATACTGGTTACTCGTAG-----------AGGCAGAAGGAAGCGCTTCTGACCATATAA--AGTATATATATTCTTGATCAGGATCAATAGCCGAGTCGATATGACCATGTCCGTCTGTCTGT-------------CCGTCCGTATGAACGCTGA--GATC--TCAGAAACTACAAAAGCTAGAAAGTTGA--GACTATGCATACAGACTCCAAAGACACAGACATAGACGTAG--CGCAAGTTTGTTGATTCATGTTGCCATGCCCACT------------------------------------------------------CTAAGGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................................CGAGTCGATATGACCATGTCCGTCTGTC..................................................................................................................................................................................................................28201.0521000000000021
........................................................................................................................TGT-------------CCGTCCGTATGAACGCTGA--GATC--.......................................................................................................................................................................26200.35700000000007
...........................................................................................................................................................................TACAAAAGCTAGAAAGTTGA--GACTATT..................................................................................................................................2750.20100000010000
......................................................................................AATAGCCGAGTCGATATGACCATG............................................................................................................................................................................................................................24200.15303000000000
....................................................................................................................TGTCTGT-------------CCGTCCGTATGAACGCTGA--.............................................................................................................................................................................26200.10200020000000
....................................................................................................TATGACCATGTCCGTCTGTC..................................................................................................................................................................................................................20200.05101000000000
..........................................................................................GCCGAGTCGATATGACCATGTCCGTC......................................................................................................................................................................................................................26200.05100010000000
.........................................................................................................................................................................................................................................G--CGCAAGTTTGTTGATTCATGTTGCC.....................................................................26200.05101000000000
...............................................................................................................................................................................................................................................AAGTTTGTTGATTCATGTTGC......................................................................21200.05101000000000
..................................................................................................................................................GAACGCTGA--GATC--TCAGAAA................................................................................................................................................................20200.05101000000000
..................................................................................................GATATGACCATGTCCGTCTGTCTGT-------------CC................................................................................................................................................................................................27200.05101000000000
droEre2
--------------------------------------TTT----------CCATATAA--AGTAAATATATTCTTGATAAGGATCAATAGCCGAGTCGAACTGCCCATGTCCGTCTGTCCGTCCGTCCGTCTGT-----CCGTATGAACGCCTC--GTTC--TCAGGAAATACAAAAGCTAGAATGTTGA--GATTAAGCATGCAGCTTCCA------GAGACATAGACACAA--CACAAGTTTATTTCCAAATGTTGGCACGCCCACTCTAA--------------------------------------------C-A---ATTTTGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
......................................................................................AATAGCCGAGTCGAACTGC.................................................................................................................................................................................................................................1940.2510001000
.......................................................................................ATAGCCGAGTCGAACTGCCC...............................................................................................................................................................................................................................2050.2010001000
............................................................................................................TGTCCGTCTGTCCGTCCGTCCGTC......................................................................................................................................................................................................24130.0811000000
..........................................................................................................................TCCGTCCGTCTGT-----CCGTATGAACGCC.................................................................................................................................................................................26200.0511000000
...................................................................................................................CTGTCCGTCCGTCCGTCTGT-----CC............................................................................................................................................................................................22200.0510100000
.............................................................................................................................................................................................GA--GATTAAGCATGCAGCTTCC......................................................................................................................21200.0510100000
...........................................................................................................................................................................TACAAAAGCTAGAATGTTGA--GATTAAGC.................................................................................................................................28200.0511000000

Generated: 05/18/2015 at 02:14 AM