ID:

dmo_2223

 Coordinate:

scaffold_6541:1738753-1738903 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-11.7 -11.5 -11.5

Flybase annnotation

exon [dmoj_GLEANR_14532:3]; CDS [Dmoj\GI14224-cds]; intron [Dmoj\GI14224-in]

Repeatable elements

NameClassFamilyStrand
PARISDNATcMar-Tc1-
mature
  1. scaffold_2111:2470-2494 -
  2. scaffold_6473:13845211-13845235 -
  3. scaffold_6473:13847701-13847725 +
  4. scaffold_6473:14667142-14667166 +
  5. scaffold_6482:229850-229874 +
  6. scaffold_6482:236471-236495 -
  7. scaffold_6482:238179-238203 +
  8. scaffold_6482:400340-400364 +
  9. scaffold_6500:31963064-31963088 +
  10. scaffold_6500:31986956-31986980 -
  11. scaffold_6540:518873-518897 +
  12. scaffold_6541:1737108-1737132 -
  13. dmo_2223  scaffold_6541:1738762-1738786 +
  14. scaffold_6680:19662578-19662602 -
star

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AGTGCCTTTCCTAATAAAATATGATGTTAAAGTTAAATTTGTACGACTTTTTTTGTTTTGCAAACAATTAATGGACATACTGTATCTATATTTATCTTTTATCACATCGTCGTAAACACTATTTAATTTTGAGAATAATAATAGTGAAATATTAATAAACATATATTATGCTTTCATTTTAAACGATTATATAATTCGCAGAATATAGATTTTCCAAGTATGCGGCAAGCATAATTGCAGCGTCAAGTATT
**************************************************..((((((...))))))..((((((((((.(((((...((((.....(((((.((...)).)))))(((((((................))))))).......))))...))))).))))..)))))).....(((.........)))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V041
embryo
 V056
head
 V110
male body
...................TATGATGTTAAAGTTAAATTTGTACGACT........................................................................................................................................................................................................... 29 0 8 2.00 16 5 11 0 0 0
...................TATGATGTTAAAGTTAAATTTGTACG.............................................................................................................................................................................................................. 26 0 8 1.38 11 11 0 0 0 0
.............................................................................................................................................................................................................TAGATTTTCCAAGTATGCGGCA........................ 22 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................................................................AAGCATAATTGCAGCGTCAAGT... 22 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................................................TTTTCCAAGTATGCGGCAAGCATAATTG.............. 28 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................................................................GATTTTCCAAGTATGCGGCAA....................... 21 0 1 1.00 1 1 0 0 0 0
...................TATGATGTTAAAGTTAAATTTGTAC............................................................................................................................................................................................................... 25 0 9 0.89 8 8 0 0 0 0
...................TATGATGTTAAAGTTAAATTTGTACGA............................................................................................................................................................................................................. 27 0 8 0.88 7 7 0 0 0 0
...................TATGATGTTAAAGTTAAATTTGTACGAC............................................................................................................................................................................................................ 28 0 8 0.63 5 3 2 0 0 0
....................ATGATGTTAAAGTTAAATTTGTACG.............................................................................................................................................................................................................. 25 0 8 0.38 3 3 0 0 0 0
........................................................................................................................................................................TGAGTTCATTTTGAACGATTAT............................................................. 22 3 4 0.25 1 0 0 1 0 0
....................ATGATGTTAAAGTTAAATTTGTACGACT........................................................................................................................................................................................................... 28 0 8 0.25 2 2 0 0 0 0
...................TATGATGTTAAAGTTAAATTTGT................................................................................................................................................................................................................. 23 0 9 0.22 2 1 0 0 0 1
........................................................................................................................................................................TGCTATCATTTTAAATGCTTAT............................................................. 22 3 7 0.14 1 0 0 0 1 0
...................TGTGATGTTAAAGTTAAATTTGTACGAC............................................................................................................................................................................................................ 28 1 8 0.13 1 0 1 0 0 0
...................TGTGATGTTAAAGTTAAATTTGTACGACC........................................................................................................................................................................................................... 29 2 8 0.13 1 0 1 0 0 0
.....................TGATGTTAAAGTTAAATTTGTACGAC............................................................................................................................................................................................................ 26 0 8 0.13 1 1 0 0 0 0
...................TATGATGTTAAAGTTAAATTTGTACGACC........................................................................................................................................................................................................... 29 1 8 0.13 1 0 1 0 0 0
.......................ATGTTAAAGTTAAATTTGTACGACT........................................................................................................................................................................................................... 25 0 8 0.13 1 0 1 0 0 0
....................ATGATGTTAAAGTTAAATTTGT................................................................................................................................................................................................................. 22 0 9 0.11 1 1 0 0 0 0
....................ATGATGTTAAAGTTAAATTTGTAC............................................................................................................................................................................................................... 24 0 9 0.11 1 1 0 0 0 0
..................ATATGATGTTAAAGTTAAATTTGTAC............................................................................................................................................................................................................... 26 0 9 0.11 1 1 0 0 0 0
.GGGCCTTTCCTAATAAAA........................................................................................................................................................................................................................................ 18 1 10 0.10 1 0 1 0 0 0
........................................................TTTGCAAACAATTAATAGACATACT.......................................................................................................................................................................... 25 1 14 0.07 1 0 1 0 0 0
...........................................................GCAAACAATTAATGGACATACTGTA....................................................................................................................................................................... 25 0 14 0.07 1 1 0 0 0 0
...........................................................TCAAACAATTAATGGACATACTG......................................................................................................................................................................... 23 1 15 0.07 1 1 0 0 0 0
.........................................................TTGCAAACAATTAATGGACATA............................................................................................................................................................................ 22 0 17 0.06 1 1 0 0 0 0
..................................................TTTTGTTTTGCAAACAATTAATGG................................................................................................................................................................................. 24 0 19 0.05 1 1 0 0 0 0

Anti-sense strand reads

TCACGGAAAGGATTATTTTATACTACAATTTCAATTTAAACATGCTGAAAAAAACAAAACGTTTGTTAATTACCTGTATGACATAGATATAAATAGAAAATAGTGTAGCAGCATTTGTGATAAATTAAAACTCTTATTATTATCACTTTATAATTATTTGTATATAATACGAAAGTAAAATTTGCTAATATATTAAGCGTCTTATATCTAAAAGGTTCATACGCCGTTCGTATTAACGTCGCAGTTCATAA
**************************************************..((((((...))))))..((((((((((.(((((...((((.....(((((.((...)).)))))(((((((................))))))).......))))...))))).))))..)))))).....(((.........)))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body		 V041
embryo
.CACGGAAAGGATTATTTTATACTACAAT.............................................................................................................................................................................................................................. 28 0 6 5.00 30 10 20 0 0
...CGGAAAGGATTATTTTATACTACAAT.............................................................................................................................................................................................................................. 26 0 10 1.50 15 10 4 1 0
..ACGGAAAGGATTATTTTATACTACAAT.............................................................................................................................................................................................................................. 27 0 7 1.29 9 8 1 0 0
.CACGGAAAGGATTATTTTATACTACAA............................................................................................................................................................................................................................... 27 0 7 0.86 6 4 2 0 0
TCACGGAAAGGATTATTTTATACTACAAT.............................................................................................................................................................................................................................. 29 0 6 0.67 4 3 1 0 0
...........................................................CGTTTGTTAATTACCTGTATGACAT....................................................................................................................................................................... 25 0 14 0.64 9 6 3 0 0
....GGAAAGGATTATTTTATACTACAAT.............................................................................................................................................................................................................................. 25 0 10 0.50 5 4 1 0 0
.CACGGAAAGGATTATTTTATA..................................................................................................................................................................................................................................... 21 0 7 0.43 3 1 2 0 0
.CACGGAAAGGATTATTTTATACTATAAT.............................................................................................................................................................................................................................. 28 1 6 0.33 2 0 2 0 0
.CACTGAAAGGATTATTTTATACTACAAT.............................................................................................................................................................................................................................. 28 1 6 0.33 2 0 2 0 0
.CACGGAAAGGATTATTTTATACTAC................................................................................................................................................................................................................................. 25 0 7 0.29 2 0 2 0 0
...CGGAAAGGATTATTTTATACTACAA............................................................................................................................................................................................................................... 25 0 11 0.27 3 3 0 0 0
....................................................................................................TAGGGTAGCGGCATTTTTG.................................................................................................................................... 19 3 9 0.22 2 1 0 1 0
...CGGGAAGGATTATTTTATACTACAAT.............................................................................................................................................................................................................................. 26 1 10 0.20 2 0 1 1 0
TCACGGAAAGGATTATTTTATACTACAGT.............................................................................................................................................................................................................................. 29 1 6 0.17 1 0 1 0 0
.CACGGACAGGATTATTTTATACTACAAT.............................................................................................................................................................................................................................. 28 1 6 0.17 1 0 1 0 0
CCACGGAAAGGATTATTTTATACTACAAT.............................................................................................................................................................................................................................. 29 1 6 0.17 1 0 1 0 0
.CACGGAAAGGATTATTGTATACTACAAT.............................................................................................................................................................................................................................. 28 1 6 0.17 1 1 0 0 0
...........................................GCTGAAAAAAACAAAACGTTTGTTAAT..................................................................................................................................................................................... 27 0 13 0.15 2 2 0 0 0
TCACGGAAAGGATTATTTTATACTA.................................................................................................................................................................................................................................. 25 0 7 0.14 1 0 1 0 0
.CACGGAAAGGATTATTCTATACTACAAC.............................................................................................................................................................................................................................. 28 2 7 0.14 1 0 1 0 0
.CACGGAAAGGATTATTTTATACTACAAG.............................................................................................................................................................................................................................. 28 1 7 0.14 1 0 1 0 0
.CACGGAAAGGATTATTTTATACTA.................................................................................................................................................................................................................................. 24 0 7 0.14 1 1 0 0 0
..ACGGAAAGGATTATTTTATACTACAA............................................................................................................................................................................................................................... 26 0 8 0.13 1 1 0 0 0
..ACGGAAAGGATTATTTTATACTAC................................................................................................................................................................................................................................. 24 0 8 0.13 1 1 0 0 0
.................TTATACTACAATTTCAATTTAAACATTC.............................................................................................................................................................................................................. 28 1 8 0.13 1 0 1 0 0
.CACGGAAAGGATTATTTTAT...................................................................................................................................................................................................................................... 20 0 8 0.13 1 0 1 0 0
.CACGGAAAGGATTATTTT........................................................................................................................................................................................................................................ 18 0 8 0.13 1 0 1 0 0
.CACGGAAAGGATTATTTTA....................................................................................................................................................................................................................................... 19 0 8 0.13 1 0 1 0 0
..................TATACTACAATTTCAATTTAAACATGCT............................................................................................................................................................................................................. 28 0 8 0.13 1 1 0 0 0
...CGAAAAGGATTATTTTATACTACAAT.............................................................................................................................................................................................................................. 26 1 11 0.09 1 0 0 0 1
..........GATTATTTTATACTACAAT.............................................................................................................................................................................................................................. 19 0 11 0.09 1 1 0 0 0
....GGAAAGGATTATTTTATACTACAA............................................................................................................................................................................................................................... 24 0 11 0.09 1 1 0 0 0
.....GAAAGGATTATTTTATACTACAAG.............................................................................................................................................................................................................................. 24 1 11 0.09 1 1 0 0 0
.....GAAAGGATTATTTTATACTACAA............................................................................................................................................................................................................................... 23 0 11 0.09 1 1 0 0 0
........CGGATTATTTTATACTACAAT.............................................................................................................................................................................................................................. 21 1 11 0.09 1 1 0 0 0
....GGAAAGGATTATTTTATACTA.................................................................................................................................................................................................................................. 21 0 12 0.08 1 1 0 0 0
.......................................................AAAACGTTTGTTAATTACCTGTATGACAT....................................................................................................................................................................... 29 0 12 0.08 1 0 1 0 0
...CGGAAAGGATTATTTTAGA..................................................................................................................................................................................................................................... 19 1 12 0.08 1 0 1 0 0
...CGGAAAGGATTATTTTATACT................................................................................................................................................................................................................................... 21 0 12 0.08 1 1 0 0 0
...CGGGAAGGGTTATTTTATACTACAAT.............................................................................................................................................................................................................................. 26 2 12 0.08 1 0 1 0 0
...CGGAAAGGATTATTTTATAC.................................................................................................................................................................................................................................... 20 0 12 0.08 1 0 0 1 0
...........................................GCTGAAAAAAACAAAACGTTTGTTAATT.................................................................................................................................................................................... 28 0 13 0.08 1 1 0 0 0
..........................................................ACGTTTGTTAATTACCTGTATGACAT....................................................................................................................................................................... 26 0 14 0.07 1 1 0 0 0
.......................................................AAAACGTTTGTTAATTACCTGTAAGACAT....................................................................................................................................................................... 29 1 15 0.07 1 1 0 0 0
...............................................AAAAAAACAAAACGTTTGTTAATTACCT................................................................................................................................................................................ 28 0 16 0.06 1 0 1 0 0
...................................................AAACAAAACGTTTGTTAATTACCTGTA............................................................................................................................................................................. 27 0 17 0.06 1 1 0 0 0
..........................................................ACGTTTGTTAATTACCTGTA............................................................................................................................................................................. 20 0 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6541:1738703-1738953 + dmo_2223 AGTGC--C-TTTCC--------------------------------------TA------------------------------------------------------ATAAAATATG--------------------------ATGTTAAAG-TT----------------------A---AATTTGTACGA-CTTTTTTTGTTTTGCAAACAATTAATGGACATACTGTA----------------------------------------TCT-----------A--------------------------------------T-------------------------------ATTTA---------TCTTTTATCACATCGTCGTAAACACTATTTAATTTTGAGAATAATAATAGTGAAATATTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAACATAT------------------ATTATGCTTTCATTT-------------------------------------------------------------------------TAAACGAT---------------TATATAATT-------------CG-CAGAATATAGATTTTCCAAGTATGCGGCAAGCATAATTGCAGCGTCAAGTATT
droVir3 scaffold_12928:2228676-2228853 + TTTTT--T-TAGTTA-------------------------------------CA-TTGTGT-----------------------------------------------------ATTA--------------------------A---AAATA-TT----------------------T---AATTTTTGTAA-ATCGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTATTTTCAATTC--------------------------------------------------------TTTTAAAAATTGTTTTTTTTTTCTT----------------------------------------------TCTTTTTTGCATGTAAAAAATAAGTTAAAAAAAAAAAACATAAAC-A----GTAAAATAGCT----------AAAC-------------ACTAAAACTG---------------TTTTTTT-----------------------------------------------TTTAATCGTTT
droGri2 scaffold_15203:4418204-4418383 - TACAT--T-TGTGG-----------------------------------------------------------------------------------------------TTTGTCATCTTCATCATTACAAACCTTATAATTGTAGCTTAAGTATAAAGTATTTTTCATATTTATATTGTGTATTGTATG-------TATATCTTTAATAACCAATTCTTAAACATACTTTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGAACATAGGTTTTCTAAGTATACATCGAGCACTATTGCGGCATCGAGCATT
droWil2 scf2_1100000014173:51-254 - AGTAA--TCGTTTA--------------------------------------TA------------------------------------------------------ATAAATTTTA--------------------------AGCTTAAAA-AT----------------------G---AATTTGTGTGA-CTTTTTTCATTTTGCAAAGAATTACTTGACAAACTGTA----------------------------------------TGT-----------T----------------------------------------GTAC-ATATTATGTACATACATATGTACGTAC----------------------------------------------------------------TTACAATG------------------------------------------------------------------------------GACAGAACAATGATTTCTGACAAAACA--------------------------------------------------------------------------------------------------------TTTTGTTACTTTCAAAATTATAATTATATCA--------------------T---------------------------------------------------------------ACATAC--------------------------------------------------------------------------------------------------------ATTTTCCAAAT
dp5 XL_group1a:1221436-1221596 + TATGC--C-TTTAC--------------------------------------TC------------------------------------------------------ATATTTTCC---------------------------ATGTTTAAG-TC----------------------A---ATCTTATGTGC-CTTTTTACATTTTGCAAACAATTAATAGACATACTGGAAATAAGTTG------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGTATTTAAGTTTGACA----------------------------------------------------------------AATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTTATTTCATTA--------------------------------------------------------------TGAACATGG--ATTA----------------------CTACTA----------------------------------------------------------CTAATTTTAAA
droPer2 scaffold_10:824530-824762 - TGTAA--C-TAATA--------------------------------------CTAA----------------------------------------------------ATAATTTATA--------------------------G-TATTAAT-TA----------------------A---AGGTTATAAA----------------------------------------------------------------------------------TAAATTTTATAAATTTAATAATAAGTTTAATAATAATTTAGAAAATAAATGT-------------------------------ATGTATACAATTTAACTAATACTGAATAATTTATAGTATTATTTAAATTTAATAATAATAATAATTTAATAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAT-A----------------------------------------------------ATTTAATA------AATACATTTATT-TAT-TACA-----------T-----------TTAACTAA---------------TACTAAATA----------------------------------------------------------GTTCATAGCAT
droAna3 scaffold_13034:584548-584712 - GCGGT--C-ATTTC--------------------------------------GA------------------------------------------------------TCAAAACATT--------------------------TTAAAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGT-------------------------------TTTTTTACCATTCAATCAAC--------------------------------------------------------------TTATAACAGTTT---------------------------------------ATT----CAAATATAACTTCT---------CATTTCTCATAAAACGTTATAATTTTCATTACAAATTATATCTTC----------------------------------------------------------------------------------------------------ATATTTCTG-----------------TGTTTTCTTTT-------------------------------------------------------------------------TTAACTAA---------------TACA---------------------------------------------------------------------AATTC
droBip1 scf7180000391832:10688-10893 - AATGA--C-GTTTT--------------------------------------TCATTTTGTTTTTTATAAAAATAAACTTTTTTACTCACATTTTTGTTTCCCACA-----AATTAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGATGCCACCTTTTCAATGGATTTCATTTTCATTTCATTCCG-------------------------------------------------------------------------------------------------GTGTTTTAAACAATTTTTTTTATACACTTTTACCACATAACTAATTAAATTAAATTAAAAAACA-------TATT-----TTACGTAA----------TT--------------------------------------------------------------------------------------TC----AACAAATTTAT
droKik1 scf7180000302610:782926-783139 - TACAA--T-TATTG----------------------------------------------------------------------------------------------ATGGATTATTTTGATGA--------------------------TT-T----------------------------------------------------------------------TGCATTATGTT------------------------------------TATGAATTTTTTTTATTTGTAAATAT----------------------------TTTTCTATATTTTTTGTATATTTTTATATATTTGTATATATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATACTTTTAAAAATATTTTCCTTTTTTTTAAATATATATTTTAATATATT----------------------T------------------------------------------------------------------TG-TATATATTTTT------ATATTTCGATATATTTTTTTATACTT----------------------------------------------------------CTATATATTTT
droFic1 scf7180000454069:70271-70415 - TTTTT--G-TTTTTA-------------------------------------AA-GCGATT-----------------------------------------------------AAG-----------------------------------------------------------------------------------------------------ATTGACATTTTTTT----------------------------------------TTT-----------A------AGTTT----------------------------T----------------------------------------------TTTTATCTCAGTGAAGTTTGTGCTCTTTA----------------------------------------------------------------------------------------ATAT-----------------------------------------------------------------------------------------------------------------TTGGAGCATT----------------------------AATTTTAATGATTAATTTAAGTATTA----------------ATTCTATTTTAATTT-------------------------------------------------------------------------TGA---------------------------------------------------------------------------------------GCTTAAATAAT
droEle1 scf7180000490621:23921-24127 + TTTCT--T-ATTAT------------------------------TTA-----TT------------ATAAAATGTATTGTATATTTGTATTCCTATATTTTCATTATAGTAAGGTAAA----------------------------------A-GA----------------------A---AATTTTTGTTA-TTTT------------------------------------------------------------ATTTCCTTTTTTTTTTT-----------CTTATGAATG------------------------------------------------------------------------------------------------------------------------------GCCATCCTACAAAATCTATTCTATAAAAATTTTTAATCTATTTTTATGAACTGTCTGTGTTTTATTTTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATTT-------------------------------------------------------------------------AAAATAGT---------------TAT---------------------------------------------------------------------ATTATT
droRho1 scf7180000778263:3646-3832 + AATGC--A-TATCAATTTAAGATAGATATCTGAAATGGATTTATTAAGTTTTGAATTTAGT-----------------------------------------------------------------------------------------------------------------------------------------------TTTTTATGTGGTTAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATATTTGATTTGGGTTTCCAAATCTCTGATCTTCTGATCTGTTTTTGAAAAATG----------------------------ATACCTATAAATTAATAGAAATAT------------------TTTATTTTTAAATTT-------------------------------------------------------------------------TAAACATA---------------TAA--------------------------------------------------------------------ATAATTC
droBia1 scf7180000302377:149739-149957 - AAAAG--A-CATTT----------------------------------------------------------------------------------------------TTG---------------------------------CGTGCAAAG--T----------------------A---AAAACATATGCTTGTTTTTCAGTGTGTAAAGAGTTTATTGACATACTGTA----------------------------------------TAT-----------A--------------------------------------C-------------------------------CAGT----------------------------------------------------------------------------------------ATTTTGTAATGTATTTTATTAAGTGGAATATACTCCACTTAATAT-----------------------------------------------------------------------------------------------------------------ATAGAAGATAAATGTGTAATTCTAA--AGAATTTTCGGGTACTGAAAAATTGATTTTAATATCAA----------------------A-----------------------------------------------------------------------------------------------------------------------------------------------------------CGACCACATTCTTAGGACAAAAGTTT
droTak1 scf7180000413235:33632-33831 - GATTT--A-CAAATA-------------------------------A-----TA------------------------------------------------------ATA---------------------------------ATTTTAAAG-TT--------------------------------------------------------------------TTGCACGAAATAAGCTGTGACATTAAAAAAATCAATGATTTTAGTTTTTTA-----------ATTATTAAATGT----------------------------TATTCTATGGACTCTAAAAATAGAAAAGTGGGT----------------------------------------------------------------TAATAAGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCAGAATAC------------------T-------------------------------------------------------------------ACCTAACA-TAACTGCATTT------AAATTTTGGTAAATTATCGTATAGTT----------------------------------------------------------TGTTAGCTATA
droEug1 scf7180000407686:13256-13482 - TATAA--T-ATTTA--------------------------------------TA------------------------------------------------------ATATAATATT--------------------------TTATTAAAA-TT----------------------G------------------------------------TTAGTATACACATTATA----------------------------------------------------------------------------------------------------------------------------------------------AAC--------------------------------------------------------------TTGTACAATTAT---------------------------------------ATGTATGTAAATATAT-TTATTA---------AATTTAATTATGTGTTATAATTTAT--------T--------TGTTCGGTCAAACTCACAATATTTTTCGTCTTACATACTGTTTCTCTTTGCCT----------------------------ATA-----------CAAA-T----------------------------------------------------GTAAACAA------AGCTCATTAACA-TGTA-----TTAACC----------AATC--------------------------------------------------------------------------------------TCTGTAAATTACTCTGT
dm3 chrX:21962377-21962556 - AAACC--C-TTAAT---------------------------------------T------------------------------------------------------TTA---------------------------------ACTTTAAAG-TC----------------------A---AAAATTCAACT-TATTTTACAGTGTGTAAACAGTTTCTTGACAAACTGTA----------------------------------------TAT-----------G--------------------------------------T-------------------------------ATGTAGGTAAT----------------------------TTCCCAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC--CTAAT---------TGAAAATGCAAATTAAAATCGAAC----------------------ATGAACTA-------------------------------------------------------------------------AAAATCATAAAACCAGAAATG---------------CTT--TTATAAA------------------------------------------CGATTTTTTAA
droSim2 3r:5798963-5799031 - TTATA----------------------------------------------------------------------------------------------------------AAATAAG--------------------------GGATTCATT-AT----------------------T---TAAATATATGG-TTTT-----ATTAGTAATCATTTTCTAGACACCCTGTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T
droSec2 scaffold_5514:287-394 + TGTTTGTC-TTTTC--------------------------------------TC------------------------------------------------------TTAAAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT----------------------------TGTTACATTAA-----------------------------------------------------------------ATGATAAAAATAAACATTAAGCAATATTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAATATAT------------------T-------------------------------------------------------------------ACATGCTT-TAACCATGT----------------------------TTAAAA----------------------------------------------------------CTAGATATAAT
droYak3 v2_chrUn_1042:855-1009 + AATTT--A-TTTAT------------------------------TTA-------------------------------------------------------------------------------------------------TTTTTTAAT--T----------------------T---CATCTATTTTT-ACTTTTTTTTTTTACAAATAATTAATAATAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATTTAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTAC--CTAATTTAATATTTTTGAAGAATAGTTAATCATTA----------------------TACATTCATTT-------------------------------------------------------------------------AAAATCAT---------------TACAAAGTC----------------------------------------------------------AGGGATAGAGA
droEre2 scaffold_4784:23892578-23892676 - TATTA--A-AAAATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATAATAATAGTGAAATGTTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAAAAAA-------------------------------------------------------------------CATTATT-A----TAGA-----------T-----------GTAGCTCC---------------CATTAAAAAAATTATT--ATTTTGA------------------------------------------AAATTATATAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
AGTGC--C-TTTCC--------------------------------------TA------------------------------------------------------ATAAAATATG--------------------------ATGTTAAAG-TT----------------------A---AATTTGTACGA-CTTTTTTTGTTTTGCAAACAATTAATGGACATACTGTA----------------------------------------TCT-----------A--------------------------------------T-------------------------------ATTTA---------TCTTTTATCACATCGTCGTAAACACTATTTAATTTTGAGAATAATAATAGTGAAATATTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAACATAT------------------ATTATGCTTTCATTT-------------------------------------------------------------------------TAAACGAT---------------TATATAATT-------------CG-CAGAATATAGATTTTCCAAGTATGCGGCAAGCATAATTGCAGCGTCAAGTATTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..................................................................................................................TATG--------------------------ATGTTAAAG-TT----------------------A---AATTTGTACGA-CT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2982.00165000110
..................................................................................................................TATG--------------------------ATGTTAAAG-TT----------------------A---AATTTGTACG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2681.38111100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGATTTTCCAAGTATGCGGCA........................2211.001100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCATAATTGCAGCGTCAAGT...2211.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTCCAAGTATGCGGCAAGCATAATTG..............2811.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTTCCAAGTATGCGGCAA.......................2111.001100000
..................................................................................................................TATG--------------------------ATGTTAAAG-TT----------------------A---AATTTGTAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2590.898800000
..................................................................................................................TATG--------------------------ATGTTAAAG-TT----------------------A---AATTTGTACGA-..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2780.887700000
..................................................................................................................TATG--------------------------ATGTTAAAG-TT----------------------A---AATTTGTACGA-C.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2880.635300020
...................................................................................................................ATG--------------------------ATGTTAAAG-TT----------------------A---AATTTGTACG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2580.383300000
...................................................................................................................ATG--------------------------ATGTTAAAG-TT----------------------A---AATTTGTACGA-CT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2880.252200000
..................................................................................................................TATG--------------------------ATGTTAAAG-TT----------------------A---AATTTGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2390.222100001
....................................................................................................................TG--------------------------ATGTTAAAG-TT----------------------A---AATTTGTACGA-C.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2680.131100000
..................................................................................................................TATG--------------------------ATGTTAAAG-TT----------------------A---AATTTGTACGA-CC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2980.131000010
................................................................................................................................................ATGTTAAAG-TT----------------------A---AATTTGTACGA-CT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2580.131000010
...................................................................................................................ATG--------------------------ATGTTAAAG-TT----------------------A---AATTTGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2290.111100000
...................................................................................................................ATG--------------------------ATGTTAAAG-TT----------------------A---AATTTGTAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2490.111100000
.................................................................................................................ATATG--------------------------ATGTTAAAG-TT----------------------A---AATTTGTAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2690.111100000
...............................................................................................................................................................................................................GCAAACAATTAATGGACATACTGTA----------------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25140.071100000
.............................................................................................................................................................................................................TTGCAAACAATTAATGGACATA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22170.061100000
......................................................................................................................................................................................................TTTTGTTTTGCAAACAATTAATGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24190.051100000
droVir3
TTTTT--T-TAGTTA-------------------------------------CA-TTGTGT-----------------------------------------------------ATTA--------------------------A---AAATA-TT----------------------T---AATTTTTGTAA-ATCGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTATTTTCAATTC--------------------------------------------------------TTTTAAAAATTGTTTTTTTTTTCTT----------------------------------------------TCTTTTTTGCATGTAAAAAATAAGTTAAAAAAAAAAAACATAAAC-A----GTAAAATAGCT----------AAAC-------------ACTAAAACTG---------------TTTTTTT-----------------------------------------------TTTAATCGTTTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......T-TAGTTA-------------------------------------CA-TTGTGT-----------------------------------------------------ATTA--------------------------A---........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAGTTAAAAAAAAAAAA.............................................................................................................................................1970.141001000000000000000000000000000000000000000000000000000000000000
droGri2
TACAT--T-TGTGG-----------------------------------------------------------------------------------------------TTTGTCATCTTCATCATTACAAACCTTATAATTGTAGCTTAAGTATAAAGTATTTTTCATATTTATATTGTGTATTGTATG-------TATATCTTTAATAACCAATTCTTAAACATACTTTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGAACATAGGTTTTCTAAGTATACATCGAGCACTATTGCGGCATCGAGCATTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
AGTAA--TCGTTTA--------------------------------------TA------------------------------------------------------ATAAATTTTA--------------------------AGCTTAAAA-AT----------------------G---AATTTGTGTGA-CTTTTTTCATTTTGCAAAGAATTACTTGACAAACTGTA----------------------------------------TGT-----------T----------------------------------------GTAC-ATATTATGTACATACATATGTACGTAC----------------------------------------------------------------TTACAATG------------------------------------------------------------------------------GACAGAACAATGATTTCTGACAAAACA--------------------------------------------------------------------------------------------------------TTTTGTTACTTTCAAAATTATAATTATATCA--------------------T---------------------------------------------------------------ACATAC--------------------------------------------------------------------------------------------------------ATTTTCCAAATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TTACAATG------------------------------------------------------------------------------GACAGAACAATGATTTC..............................................................................................................................................................................................................................................................................................................................................................252100.0020065810522
........................................................................................................................................................................................................................................................................................................................................................................................................................................TACAATG------------------------------------------------------------------------------GACAGAACAATGATTTC..............................................................................................................................................................................................................................................................................................................................................................24228.50576311190
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TTACAATG------------------------------------------------------------------------------GACAGAACAATGATTT...............................................................................................................................................................................................................................................................................................................................................................24213.5027080181
..............................................................................................................................................................................................................TGCAAAGAATTACTTGACAAACTGTA----------------------------------------TG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28513.20660510150
....................................................................................................................................................................................................................................................................................................................................................................TAC----------------------------------------------------------------TTACAATG------------------------------------------------------------------------------GACAGAACAATGATTTC..............................................................................................................................................................................................................................................................................................................................................................2827.501555050
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TTACAATG------------------------------------------------------------------------------GACAGAACAATGATTTCT.............................................................................................................................................................................................................................................................................................................................................................2626.001207050
....................................................................................................................................................................................................................................................................................................................................................................TAC----------------------------------------------------------------TTACAATG------------------------------------------------------------------------------GACAGAACAATGATT................................................................................................................................................................................................................................................................................................................................................................2625.501106050
.................................................................................................................TTTTA--------------------------AGCTTAAAA-AT----------------------G---AATTTGTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2525.5011000110
....................................................................................................................................................................................................................................TGTA----------------------------------------TGT-----------T----------------------------------------GTAC-ATATTATGTACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2415.00502030
..............................................................................................................................................................................................................TGCAAAGAATTACTTGACAAACTGTA----------------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2684.8839033060
....................................................................................................................................................................................................................................................................................................................................................................TAC----------------------------------------------------------------TTACAATG------------------------------------------------------------------------------GACAGAACAATGAT.................................................................................................................................................................................................................................................................................................................................................................2524.00803050
........................................................................................................................................................................................................................TACTTGACAAACTGTA----------------------------------------TGT-----------T----------------------------------------GTAC-A...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2514.00404000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TACAATG------------------------------------------------------------------------------GACAGAACAATGATTTCT.............................................................................................................................................................................................................................................................................................................................................................2523.00601050
.......................................................................................................................................................................................................................TTACTTGACAAACTGTA----------------------------------------TGT-----------T----------------------------------------GTAC-................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2513.00303000
..................................................................................................................TTTA--------------------------AGCTTAAAA-AT----------------------G---AATTTGTGTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2623.00600060
..............................................................................................................................................................................................................TGCAAAGAATTACTTGACAAACTGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2582.7522013090
........................................................................................................................................................................................................................................................................................................................................................................................................................................TACAATG------------------------------------------------------------------------------GACAGAACAATGATTTCTGA...........................................................................................................................................................................................................................................................................................................................................................2722.50503020
............................................................................................................................................................................................................................TGACAAACTGTA----------------------------------------TGT-----------T----------------------------------------GTAC-ATATTATG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2812.00202000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TTACAATG------------------------------------------------------------------------------GACAGAACAATGATT................................................................................................................................................................................................................................................................................................................................................................2322.00401030
.......................................................................................................................................................................................................................TTACTTGACAAACTGTA----------------------------------------TGT-----------T----------------------------------------GTAC-A...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00202000
....................................................................................................................TA--------------------------AGCTTAAAA-AT----------------------G---AATTTGTGTGA-CT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2722.00400040
..............................................................................................................................................................................................................TGCAAAGAATTACTTGACAAACTGTA----------------------------------------T...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2751.60806020
.................................................................................................................................................................................................................AAAGAATTACTTGACAAACTGTA----------------------------------------TGT-----------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2651.60807010
.................................................................................................................................................................................................................AAAGAATTACTTGACAAACTGTA----------------------------------------TG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2551.60807010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATATCA--------------------T---------------------------------------------------------------ACATAC--------------------------------------------------------------------------------------------------------ATTTTCCAAAT2621.50303000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TACAATG------------------------------------------------------------------------------GACAGAACAATGATTT...............................................................................................................................................................................................................................................................................................................................................................2321.50301020
..............................................................................................................................................................................................................TGCAAAGAATTACTTGACAAACTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2481.2510010000
...............................................................................................................................................................................................................GCAAAGAATTACTTGACAAACTGTA----------------------------------------TG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2751.20606000
.................................................................................................................TTTTA--------------------------AGCTTAAAA-AT----------------------G---AATTTGTGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2621.00200020
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACAAAACA--------------------------------------------------------------------------------------------------------TTTTGTTACTTTCAAAAT..........................................................................................................................................................................................................................2821.00202000
.............................................................................................................................................................................................................................GACAAACTGTA----------------------------------------TGT-----------T----------------------------------------GTAC-ATATT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
........................................................................................................................................................................................................................................................................................................................................................TACATATGTACGTAC----------------------------------------------------------------TTACAATG------------------------------------------------------------------------------GACA...........................................................................................................................................................................................................................................................................................................................................................................2721.00202000
...........................................................................................................................................................................................................................TTGACAAACTGTA----------------------------------------TGT-----------T----------------------------------------GTAC-ATATTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000
.................................................................................................................................................................................................................AAAGAATTACTTGACAAACTGTA----------------------------------------TGT-----------T----------------------------------------G....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2821.00202000
....................................................................................................................TA--------------------------AGCTTAAAA-AT----------------------G---AATTTGTGTGA-CTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2821.00202000
.................................................................................................................TTTTA--------------------------AGCTTAAAA-AT----------------------G---AATTTGTGTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2721.00200020
..................................................................................................................TTTA--------------------------AGCTTAAAA-AT----------------------G---AATTTGTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2421.00200020
.....................................................................................................................................................................................................................................GTA----------------------------------------TGT-----------T----------------------------------------GTAC-ATATTATGTACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000
...................................................................................................................TTA--------------------------AGCTTAAAA-AT----------------------G---AATTTGTGTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2521.00200020
...........................................................................................................................................................................................................................TTGACAAACTGTA----------------------------------------TGT-----------T----------------------------------------GTAC-ATAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TTACAATG------------------------------------------------------------------------------GACAGAACAATGATTTCTGA...........................................................................................................................................................................................................................................................................................................................................................2821.00202000
........................................................................................................................................................................................................................TACTTGACAAACTGTA----------------------------------------TGT-----------T----------------------------------------GTAC-ATAT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTACTTTCAAAATTATAATTATA................................................................................................................................................................................................................2520.50101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATTTCTGACAAAACA--------------------------------------------------------------------------------------------------------TTT.........................................................................................................................................................................................................................................2020.50101000
.....................................................................................................................................................................................................................................................................................................................................................................AC----------------------------------------------------------------TTACAATG------------------------------------------------------------------------------GACAGAACAATGATTTC..............................................................................................................................................................................................................................................................................................................................................................2720.50101000
......................................................................................................................................................................................................................................................................................................................................................................C----------------------------------------------------------------TTACAATG------------------------------------------------------------------------------GACAGAACAATGATTT...............................................................................................................................................................................................................................................................................................................................................................2520.50101000
.....................................................................................................................................................................................................................................................................................................................................................................AC----------------------------------------------------------------TTACAATG------------------------------------------------------------------------------GACAGAACAATGATTTT..............................................................................................................................................................................................................................................................................................................................................................2720.50101000
................................................................................................................................................................................................................................................................................................................................................................TACGTAC----------------------------------------------------------------TTACAATG------------------------------------------------------------------------------GACAGAACAATGAT.................................................................................................................................................................................................................................................................................................................................................................2920.50101000
.....................................................................................................................................................................................................................................................................................................................................................ACATACATATGTACGTAC----------------------------------------------------------------TTACAATG------------------------------------------------------------------------------G..............................................................................................................................................................................................................................................................................................................................................................................2720.50101000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TACAATG------------------------------------------------------------------------------GACAGAACAATGATTTCTGT...........................................................................................................................................................................................................................................................................................................................................................2720.50101000
............TA--------------------------------------TA------------------------------------------------------ATAAATTTTA--------------------------AGCTTAAAA-AT----------------------G---......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.50100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................TACAATG------------------------------------------------------------------------------GACAGAACAATGATT................................................................................................................................................................................................................................................................................................................................................................2220.50101000
...............................................................................................................................................................................................................GCAAAGAATTACTTGACAAACTGTA----------------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2580.50404000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................ACAATG------------------------------------------------------------------------------GACAGAACAATGATTTCTGA...........................................................................................................................................................................................................................................................................................................................................................2620.50101000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TACAATG------------------------------------------------------------------------------GACAGAACAATG...................................................................................................................................................................................................................................................................................................................................................................1920.50100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACAAAACA--------------------------------------------------------------------------------------------------------TTTTGTTACTTTCAAAA...........................................................................................................................................................................................................................2720.50101000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TACAATG------------------------------------------------------------------------------GACAGAACAATGATTTCTG............................................................................................................................................................................................................................................................................................................................................................2620.50100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATTTCTGACAAAACA--------------------------------------------------------------------------------------------------------TTTTGT......................................................................................................................................................................................................................................2320.50100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAACA--------------------------------------------------------------------------------------------------------TTTTGTTACTTTCAAAAT..........................................................................................................................................................................................................................2520.50101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CAATG------------------------------------------------------------------------------GACAGAACAATGATTTC..............................................................................................................................................................................................................................................................................................................................................................2220.50101000
..............................................................................................................................................................................................................TGCAAAGAATTACTTGACAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21100.50500050
..............................................................................................................................................................................................................................................................................................................................................................TGTACGTAC----------------------------------------------------------------TTACAATG------------------------------------------------------------------------------GACAGAA........................................................................................................................................................................................................................................................................................................................................................................2420.50100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAATGATTTCTGACAAAACA--------------------------------------------------------------------------------------------------------TTT.........................................................................................................................................................................................................................................2520.50101000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATGATTTCTGACAAAACA--------------------------------------------------------------------------------------------------------TTTTGT......................................................................................................................................................................................................................................2620.50100010
.................................................................................................................................................................................................................................................................................................................................................................ACGTAC----------------------------------------------------------------TTACAATG------------------------------------------------------------------------------GACAGAACAATGA..................................................................................................................................................................................................................................................................................................................................................................2720.50101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TTACAATG------------------------------------------------------------------------------GACAGAACAATGATTTCTT............................................................................................................................................................................................................................................................................................................................................................2720.50100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................ACAATG------------------------------------------------------------------------------GACAGAACAATGATTTC..............................................................................................................................................................................................................................................................................................................................................................2320.50101000
..................................................................................................................................................................................................................AAGAATTACTTGACAAACTGTA----------------------------------------TGT-----------T----------------------------------------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.50101000
..............................................................................................................................................................................................TGA-CTTTTTTCATTTTGCAAAGAAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25100.50501040
....................................................................................................................................................................................................................................................................................................................................................................TAC----------------------------------------------------------------TTACAATG------------------------------------------------------------------------------GACAGAACAATGATTT...............................................................................................................................................................................................................................................................................................................................................................2720.50100010
................................................................................................................................................................................................................................................................................................................................................................TACGTAC----------------------------------------------------------------TTACAATG------------------------------------------------------------------------------GACAGAACAATG...................................................................................................................................................................................................................................................................................................................................................................2720.50100010
...................................................................................................................TTA--------------------------AGCTTAAAA-AT----------------------G---AATTTGTGTGA-..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.50100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATCA--------------------T---------------------------------------------------------------ACATAC--------------------------------------------------------------------------------------------------------ATTTTCCAAAT2520.50101000
.................................................................................................................................................................................................................................................................................................................................................................ACGTAC----------------------------------------------------------------TTACAATG------------------------------------------------------------------------------GACAGAACAATG...................................................................................................................................................................................................................................................................................................................................................................2620.50100010
..............................................................................................................................................................................................................................................................................................................................................................TGTACGTAC----------------------------------------------------------------TTACAATG------------------------------------------------------------------------------GACAGAACAA.....................................................................................................................................................................................................................................................................................................................................................................2720.50101000
..............................................................................................................................................................................................................TGCAAAGAATTACTTGACAAACTGTA----------------------------------------TGT-----------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2950.40202000
................................................................................................................................................................................................................CAAAGAATTACTTGACAAACTGTA----------------------------------------TG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2650.40201010
........................................................................................................................................................................................................TCATTTTGCAAAGAATTACTTGACAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26100.30303000
........................................................................................................................................................................................................TCATTTTGCAAAGAATTACTTGACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25100.30303000
....................................................................................................................................................TAAAA-AT----------------------G---AATTTGTGTGA-CT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.25100010
....................................................................................................................................................TAAAA-AT----------------------G---AATTTGTGTGA-CTTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2440.25100010
.................................................................................................................................................GCTTAAAA-AT----------------------G---AATTTGTGTGA-CTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2540.25100010
....................................................................................................................................................................................................TTTTTCATTTTGCAAAGAATTACT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24120.25302010
........................................................................................................................................................................................................TCATTTTGCAAAGAATTACTTGACAAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2890.22202000
...........................................................................................................................................................T----------------------G---AATTTGTGTGA-CTTTTTTCATTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25100.20201010
.........................................................................................................................................................................................................................ACTTGACAAACTGTA----------------------------------------TGT-----------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1850.20101000
..................................................................................................................................................................................................................AAGAATTACTTGACAAACTGTA----------------------------------------TG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2450.20101000
..........................................................................................................................................................................................TGTGTGA-CTTTTTTCATTTTGCAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25110.18201010
.............................................................................................................................................................................................................TTGCAAAGAATTACTTGACAAACTGTA----------------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2780.13101000
............................................................................................................................................................................................................TTTGCAAAGAATTACTTGACAAACTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2680.13101000
...............................................................................................................................................................................................................GCAAAGAATTACTTGACAAACTGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2480.13101000
............................................................................................................................................................................................................TTTGCAAAGAATTACTTGACAAACTGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2780.13101000
.................................................................................................................................................................................................................AAAGAATTACTTGACAAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1990.11100010
...................................................................................................................................................................................................................AGAATTACTTGACAAACTGTA----------------------------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.11100010
..........................................................................................................................................................................................TGTGTGA-CTTTTTTCATTTTGCAAAGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2790.11101000
.......................................................................................................................................................................................................TTCATTTTGCAAAGAATTACTTGACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26100.10101000
.....................................................................................................................................................................................................TTTTCATTTTGCAAAGAATTACTTGACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28100.10101000
...............................................................................................................................................................................................GA-CTTTTTTCATTTTGCAAAGAAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24100.10100010
....................................................................................................................................................................................................TTTTTCATTTTGCAAAGAATTACTTGACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................29100.10101000
....................................................................................................................................................................................................TTTTTCATTTTGCAAAGAATTACTTGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27110.09101000
.........................................................................................................................................................................................TTGTGTGA-CTTTTTTCATTTTGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24110.09100100
...................................................................................................................................................................................................TTTTTTCATTTTGCAAAGAATTACT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25110.09100010
.................................................................................................................................................................................................................AAAGAATTACTTGACAAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18110.09100010
.........................................................................................................................................................................................TTGTGTGA-CTTTTTTCATT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19120.08101000
..............................................................................................................................................................................................................TGCAAAGAATTACTTGAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18120.08101000
..........................................................................................................................................................................................TGTGTGA-CTTTTTTCATTTTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22120.08101000
dp5
TATGC--C-TTTAC--------------------------------------TC------------------------------------------------------ATATTTTCC---------------------------ATGTTTAAG-TC----------------------A---ATCTTATGTGC-CTTTTTACATTTTGCAAACAATTAATAGACATACTGGAAATAAGTTG------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGTATTTAAGTTTGACA----------------------------------------------------------------AATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTTATTTCATTA--------------------------------------------------------------TGAACATGG--ATTA----------------------CTACTA----------------------------------------------------------CTAATTTTAAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................................................................................................TTTCC---------------------------ATGTTTAAG-TC----------------------A---ATCTTATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25117.001701700000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA--------------------------------------------------------------TGAACATGG--ATTA----------------------CTACTA----------------------------------------------------------CTAAT......2613.0030300000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA--------------------------------------------------------------TGAACATGG--ATTA----------------------CTACTA----------------------------------------------------------CTAA.......2513.0030300000000
.......................................................................................................................................................................................................................TTAATAGACATACTGGAAATAAGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.0030300000000
................................................................................................................TTTCC---------------------------ATGTTTAAG-TC----------------------A---ATCTTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.0030300000000
............................................................................................................................................................................................................TTTGCAAACAATTAATAGACATAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2462.17130400000900
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTATTTCATTA--------------------------------------------------------------TGAACATGG--.....................................................................................................21132.1528017000001100
............................................................................................................................................................................................................TTTGCAAACAATTAATAGACATACTGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020200000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACATGG--ATTA----------------------CTACTA----------------------------------------------------------CTAATTT....2612.0020200000000
.......................................................................................................................................................................................................TACATTTTGCAAACAATTAATAGACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2652.00100300000700
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA--------------------------------------------------------------TGAACATGG--ATTA----------------------CTACTA----------------------------------------------------------CTAATTT....2812.0020200000000
............................................................................................................................................................................................................TTTGCAAACAATTAATAGACATACTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2651.8090800000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATTTCATTA--------------------------------------------------------------TGAACATGG--A....................................................................................................21131.772302200000010
.......................................................................................................................................................................................................TACATTTTGCAAACAATTAATAGACAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2751.2060211000200
....................................................................................................................................................................................................................CAATTAATAGACATACTGGAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
........................................................................................................................................................................................................................TAATAGACATACTGGAAATAAGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.................................................................................................................................................................................................................................TACTGGAAATAAGTTG------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGTATT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
...........................................................................................................................................................................................................................................AAGTTG------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGTATTTAAGTTTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
..........................................................................................................................................................................................................................................TAAGTTG------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGTATTTAAGTTTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
..............................................................................................................................................................................................................TGCAAACAATTAATAGACATACTGGAAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000000
....................................................................................................................................................................................................................................TGGAAATAAGTTG------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGTATTTAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTA--------------------------------------------------------------TGAACATGG--ATTA----------------------CTACTA----------------------------------------------------------C..........2511.0010100000000
...................................................................................................................................................................................................................ACAATTAATAGACATACTGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACATGG--ATTA----------------------CTACTA----------------------------------------------------------CTAA.......2111.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAACATGG--ATTA----------------------CTACTA----------------------------------------------------------CTAATT.....2511.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA--------------------------------------------------------------TGAACATGG--ATTA----------------------CTACTA----------------------------------------------------------CTA........2411.0010100000000
..................................................................................................................................................................................................................................ACTGGAAATAAGTTG------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGTATT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTCATTA--------------------------------------------------------------TGAACATGG--AT...................................................................................................21160.811301100000020
...........................................................................................................................................................................................................TTTTGCAAACAATTAATAGACATAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2560.6740100000300
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATTTCATTA--------------------------------------------------------------TGAACATGG--.....................................................................................................20130.6280600000200
............................................................................................................................................................................................................TTTGCAAACAATTAATAGACATACT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2550.6030300000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTATTTCATTA--------------------------------------------------------------TGAACATG........................................................................................................21130.5470300000130
........................................................................................................................................................................................................................................................................................................................................................................................................AAAGTATTTAAGTTTGACA----------------------------------------------------------------AA...............................................................................................................................................................................................................................................................................................................................................................................................................21170.5390400001130
..............................................................................................................................................................................................................................................TTG------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGTATTTAAGTTTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.50100400010050
..............................................................................................................................................................................................................................................TTG------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGTATTTAAGTTTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.50100600000040
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTTATTTCATTA--------------------------------------------------------------TGAACA..........................................................................................................21130.4660500000010
.........................................................................................................................................................................................................................................................................................................................................................................................................AAGTATTTAAGTTTGACA----------------------------------------------------------------AA...............................................................................................................................................................................................................................................................................................................................................................................................................20170.4170500000110
......................................................................................................................................................................................................TTACATTTTGCAAACAATTAATAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2450.4020000000200
.......................................................................................................................................................................................................TACATTTTGCAAACAATTAATAGAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2550.4020200000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTATTTCATTA--------------------------------------------------------------TGAACATGG--A....................................................................................................22130.3850100000400
..TGC--C-TTTAC--------------------------------------TC------------------------------------------------------ATATTTTCC---------------------------ATG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2330.3310000000100
..TGC--C-TTTAC--------------------------------------TC------------------------------------------------------ATATTTTCC---------------------------ATGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2430.3310100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTCATTA--------------------------------------------------------------TGAACATGG--A....................................................................................................20160.3150300010010
.......................................................................................................................................................................................................................................................................................................................................................................................................AAAAGTATTTAAGTTTGACA----------------------------------------------------------------A................................................................................................................................................................................................................................................................................................................................................................................................................21180.2850200000120
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTTATTTCATTA--------------------------------------------------------------TGAAC...........................................................................................................20130.2330100000020
.......................................................................................................................................................................................................................................................................................................................................................................................................AAAAGTATTTAAGTTTGACA----------------------------------------------------------------.................................................................................................................................................................................................................................................................................................................................................................................................................20190.2140300000010
...........................................................................................................................................................................................................TTTTGCAAACAATTAATAGACATACTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2750.2010100000000
.......................................................................................................................................................................................................TACATTTTGCAAACAATTAATAGACAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2750.2010100000000
..................................................................................................................................................................................................................AACAATTAATAGACATACTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2050.2010100000000
.......................................................................................................................................................................................................TACATTTTGCAAACAATT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1850.2010100000000
..............................................................................................................................................................................................................TGCAAACAATTAATAGACATACTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2450.2010100000000
..............................................................................................................................................................................................TGC-CTTTTTACATTTTGCAAACAAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2550.2010100000000
..............................................................................................................................................................................................TGC-CTTTTTACATTTTGCAAACAATTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2750.2010100000000
....................................................................................................................................................................................................TTTTACATTTTGCAAACAATT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2150.2010100000000
......................................................................................................................................................................................................TTACATTTTGCAAACAATTAATAGACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2750.2010100000000
......................................................................................................................................................................................................TTACATTTTGCAAACAATTAATAGAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2650.2010100000000
............................................................................................................................................................................................................TTTGCAAACAATTAATAGACATA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2360.1710100000000
................................................................................................................................................................................................................................................G------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGTATTTAAGTTTGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20190.1630200000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTCATTA--------------------------------------------------------------TGAACATGG--.....................................................................................................19160.1320200000000
............................................................................................................................................................................................................TTTGCAAACAATTAATAGACAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2280.1310000000100
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTCATTA--------------------------------------------------------------TGAACATGG--ATC..................................................................................................22160.1320000000020
.........................................................................................................................................................................................................CATTTTGCAAACAATTAATAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2180.1310100000000
............................................................................................................................................................................................................TTTGCAAACAATTAATAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1980.1310100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCATTA--------------------------------------------------------------TGAACATGG--A....................................................................................................19170.1220200000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCATTA--------------------------------------------------------------TGAACATGG--AT...................................................................................................20170.1220100000010
.........................................................................................................................................................................................................................................................................................................................................................................................................AAGTATTTAAGTTTGACA----------------------------------------------------------------A................................................................................................................................................................................................................................................................................................................................................................................................................19180.1120100000010
...............................................................................................................................................................................................................................................TG------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGTATTTAAGTTTGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21190.1120000000020
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTTATTTCATTA--------------------------------------------------------------TGAAC...........................................................................................................21130.0810100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTATTTCATTA--------------------------------------------------------------TGAACATG........................................................................................................20130.0810100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTTTATTTCATTA--------------------------------------------------------------TGAA............................................................................................................20140.0710100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTTATTTCATTA--------------------------------------------------------------TGAA............................................................................................................19140.0710000000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTCATTA--------------------------------------------------------------TGAACATG........................................................................................................18160.0610100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................AAAAGTATTTAAGTTTGACA----------------------------------------------------------------AA...............................................................................................................................................................................................................................................................................................................................................................................................................22170.0610100000000
........................................................................................................................................................................................................................................................................................................................................................................................................AAAGTATTTAAGTTTGACA----------------------------------------------------------------A................................................................................................................................................................................................................................................................................................................................................................................................................20180.0610100000000
................................................................................................................................................................................................................................................G------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGTATTTAAGTTTGACA----------------------------------------------------------------.................................................................................................................................................................................................................................................................................................................................................................................................................21190.0510001000000
...............................................................................................................................................................................................................................................TG------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGTATTTAAGTTTGACA----------------------------------------------------------------.................................................................................................................................................................................................................................................................................................................................................................................................................22190.0510100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................AAAAGTATTTAAGTTTGAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19190.0510100000000
..............................................................................................................................................................................................................................................TTG------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGTATTTAAGTTTGG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000100
...............................................................................................................................................................................................................................................TG------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGTATTTAAGTTTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
..............................................................................................................................................................................................................................................TTG------------------------------------------------------------------------------------------------------------------------------------------------------AAAAGTATTTAAGTTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000000
droPer2
TGTAA--C-TAATA--------------------------------------CTAA----------------------------------------------------ATAATTTATA--------------------------G-TATTAAT-TA----------------------A---AGGTTATAAA----------------------------------------------------------------------------------TAAATTTTATAAATTTAATAATAAGTTTAATAATAATTTAGAAAATAAATGT-------------------------------ATGTATACAATTTAACTAATACTGAATAATTTATAGTATTATTTAAATTTAATAATAATAATAATTTAATAATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAT-A----------------------------------------------------ATTTAATA------AATACATTTATT-TAT-TACA-----------T-----------TTAACTAA---------------TACTAAATA----------------------------------------------------------GTTCATAGCATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
GCGGT--C-ATTTC--------------------------------------GA------------------------------------------------------TCAAAACATT--------------------------TTAAAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGT-------------------------------TTTTTTACCATTCAATCAAC--------------------------------------------------------------TTATAACAGTTT---------------------------------------ATT----CAAATATAACTTCT---------CATTTCTCATAAAACGTTATAATTTTCATTACAAATTATATCTTC----------------------------------------------------------------------------------------------------ATATTTCTG-----------------TGTTTTCTTTT-------------------------------------------------------------------------TTAACTAA---------------TACA---------------------------------------------------------------------AATTCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
AATGA--C-GTTTT--------------------------------------TCATTTTGTTTTTTATAAAAATAAACTTTTTTACTCACATTTTTGTTTCCCACA-----AATTAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGGATGCCACCTTTTCAATGGATTTCATTTTCATTTCATTCCG-------------------------------------------------------------------------------------------------GTGTTTTAAACAATTTTTTTTATACACTTTTACCACATAACTAATTAAATTAAATTAAAAAACA-------TATT-----TTACGTAA----------TT--------------------------------------------------------------------------------------TC----AACAAATTTATSizeHit CountTotal NormTotal
No Reads
droKik1
TACAA--T-TATTG----------------------------------------------------------------------------------------------ATGGATTATTTTGATGA--------------------------TT-T----------------------------------------------------------------------TGCATTATGTT------------------------------------TATGAATTTTTTTTATTTGTAAATAT----------------------------TTTTCTATATTTTTTGTATATTTTTATATATTTGTATATATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTATACTTTTAAAAATATTTTCCTTTTTTTTAAATATATATTTTAATATATT----------------------T------------------------------------------------------------------TG-TATATATTTTT------ATATTTCGATATATTTTTTTATACTT----------------------------------------------------------CTATATATTTTSizeHit CountTotal NormTotal
No Reads
droFic1
TTTTT--G-TTTTTA-------------------------------------AA-GCGATT-----------------------------------------------------AAG-----------------------------------------------------------------------------------------------------ATTGACATTTTTTT----------------------------------------TTT-----------A------AGTTT----------------------------T----------------------------------------------TTTTATCTCAGTGAAGTTTGTGCTCTTTA----------------------------------------------------------------------------------------ATAT-----------------------------------------------------------------------------------------------------------------TTGGAGCATT----------------------------AATTTTAATGATTAATTTAAGTATTA----------------ATTCTATTTTAATTT-------------------------------------------------------------------------TGA---------------------------------------------------------------------------------------GCTTAAATAATSizeHit CountTotal NormTotal
No Reads
droEle1
TTTCT--T-ATTAT------------------------------TTA-----TT------------ATAAAATGTATTGTATATTTGTATTCCTATATTTTCATTATAGTAAGGTAAA----------------------------------A-GA----------------------A---AATTTTTGTTA-TTTT------------------------------------------------------------ATTTCCTTTTTTTTTTT-----------CTTATGAATG------------------------------------------------------------------------------------------------------------------------------GCCATCCTACAAAATCTATTCTATAAAAATTTTTAATCTATTTTTATGAACTGTCTGTGTTTTATTTTTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATTT-------------------------------------------------------------------------AAAATAGT---------------TAT---------------------------------------------------------------------ATTATTSizeHit CountTotal NormTotal
No Reads
droRho1
AATGC--A-TATCAATTTAAGATAGATATCTGAAATGGATTTATTAAGTTTTGAATTTAGT-----------------------------------------------------------------------------------------------------------------------------------------------TTTTTATGTGGTTAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATATATTTGATTTGGGTTTCCAAATCTCTGATCTTCTGATCTGTTTTTGAAAAATG----------------------------ATACCTATAAATTAATAGAAATAT------------------TTTATTTTTAAATTT-------------------------------------------------------------------------TAAACATA---------------TAA--------------------------------------------------------------------ATAATTCSizeHit CountTotal NormTotal
No Reads
droBia1
AAAAG--A-CATTT----------------------------------------------------------------------------------------------TTG---------------------------------CGTGCAAAG--T----------------------A---AAAACATATGCTTGTTTTTCAGTGTGTAAAGAGTTTATTGACATACTGTA----------------------------------------TAT-----------A--------------------------------------C-------------------------------CAGT----------------------------------------------------------------------------------------ATTTTGTAATGTATTTTATTAAGTGGAATATACTCCACTTAATAT-----------------------------------------------------------------------------------------------------------------ATAGAAGATAAATGTGTAATTCTAA--AGAATTTTCGGGTACTGAAAAATTGATTTTAATATCAA----------------------A-----------------------------------------------------------------------------------------------------------------------------------------------------------CGACCACATTCTTAGGACAAAAGTTTSizeHit CountTotal NormTotal
No Reads
droTak1
GATTT--A-CAAATA-------------------------------A-----TA------------------------------------------------------ATA---------------------------------ATTTTAAAG-TT--------------------------------------------------------------------TTGCACGAAATAAGCTGTGACATTAAAAAAATCAATGATTTTAGTTTTTTA-----------ATTATTAAATGT----------------------------TATTCTATGGACTCTAAAAATAGAAAAGTGGGT----------------------------------------------------------------TAATAAGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCAGAATAC------------------T-------------------------------------------------------------------ACCTAACA-TAACTGCATTT------AAATTTTGGTAAATTATCGTATAGTT----------------------------------------------------------TGTTAGCTATASizeHit CountTotal NormTotal
No Reads
droEug1
TATAA--T-ATTTA--------------------------------------TA------------------------------------------------------ATATAATATT--------------------------TTATTAAAA-TT----------------------G------------------------------------TTAGTATACACATTATA----------------------------------------------------------------------------------------------------------------------------------------------AAC--------------------------------------------------------------TTGTACAATTAT---------------------------------------ATGTATGTAAATATAT-TTATTA---------AATTTAATTATGTGTTATAATTTAT--------T--------TGTTCGGTCAAACTCACAATATTTTTCGTCTTACATACTGTTTCTCTTTGCCT----------------------------ATA-----------CAAA-T----------------------------------------------------GTAAACAA------AGCTCATTAACA-TGTA-----TTAACC----------AATC--------------------------------------------------------------------------------------TCTGTAAATTACTCTGTSizeHit CountTotal NormTotal
No Reads
dm3
AAACC--C-TTAAT---------------------------------------T------------------------------------------------------TTA---------------------------------ACTTTAAAG-TC----------------------A---AAAATTCAACT-TATTTTACAGTGTGTAAACAGTTTCTTGACAAACTGTA----------------------------------------TAT-----------G--------------------------------------T-------------------------------ATGTAGGTAAT----------------------------TTCCCAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC--CTAAT---------TGAAAATGCAAATTAAAATCGAAC----------------------ATGAACTA-------------------------------------------------------------------------AAAATCATAAAACCAGAAATG---------------CTT--TTATAAA------------------------------------------CGATTTTTTAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAATCGAAC----------------------ATGAACTA-------------------------------------------------------------------------AAAAT................................................................................................24125.002500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000051130300000000000000010100010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCAAATTAAAATCGAAC----------------------ATGAACT...............................................................................................................................................................................26119.001900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAAATCGAAC----------------------ATGAACT...............................................................................................................................................................................19117.001700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011013200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAAATCGAAC----------------------ATGAACTA-------------------------------------------------------------------------AAAAT................................................................................................25111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004110200000000000000000101100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTAAAATCGAAC----------------------ATGAACT...............................................................................................................................................................................2119.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003220200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTAAAATCGAAC----------------------ATGAACTA-------------------------------------------------------------------------AAAAT................................................................................................2719.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000500000000000000010300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................T----------------------------TTCCCAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC--CTAAT---------TGAAAATGCAAAT.......................................................................................................................................................................................................................2819.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020200140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAATTAAAATCGAAC----------------------ATGAACT...............................................................................................................................................................................2519.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003020300000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGCAAATTAAAATCGAAC----------------------ATGAAC................................................................................................................................................................................2617.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004200000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAAAATCGAAC----------------------ATGAACTA-------------------------------------------------------------------------AAAAT................................................................................................2617.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................TAAT----------------------------TTCCCAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC--CTAAT---------TGAAAATGC...........................................................................................................................................................................................................................2716.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020100120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................TCCCAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC--CTAAT---------TGAAAATGCAAAT.......................................................................................................................................................................................................................2616.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020001030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAATCGAAC----------------------ATGAACT...............................................................................................................................................................................1815.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000130100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAATCGAAC----------------------ATGAACTA-------------------------------------------------------------------------AAAATCA..............................................................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000300010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAAAATCGAAC----------------------ATGAAC................................................................................................................................................................................1915.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................TCCCAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC--CTAAT---------TGAAAATGCAAA........................................................................................................................................................................................................................2515.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................TAAT----------------------------TTCCCAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC--CTAAT---------TGAAAATG............................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010011010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGCAAATTAAAATCGAAC----------------------ATGAACT...............................................................................................................................................................................2714.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.....................................................................................................................................................................................................................AGTTTCTTGACAAACTGTA----------------------------------------T...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................TTTAAAG-TC----------------------A---AAAATTCAACT-TAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................TTACAGTGTGTAAACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................ACT-TATTTTACAGTGTGTAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................TTTACAGTGTGTAAACAGTTTCTTGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................TCAACT-TATTTTACAGTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................TTTACAGTGTGTAAACAGTTTCTT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TTATA----------------------------------------------------------------------------------------------------------AAATAAG--------------------------GGATTCATT-AT----------------------T---TAAATATATGG-TTTT-----ATTAGTAATCATTTTCTAGACACCCTGTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
TGTTTGTC-TTTTC--------------------------------------TC------------------------------------------------------TTAAAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT----------------------------TGTTACATTAA-----------------------------------------------------------------ATGATAAAAATAAACATTAAGCAATATTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAATATAT------------------T-------------------------------------------------------------------ACATGCTT-TAACCATGT----------------------------TTAAAA----------------------------------------------------------CTAGATATAATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
AATTT--A-TTTAT------------------------------TTA-------------------------------------------------------------------------------------------------TTTTTTAAT--T----------------------T---CATCTATTTTT-ACTTTTTTTTTTTACAAATAATTAATAATAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCATTTAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTAC--CTAATTTAATATTTTTGAAGAATAGTTAATCATTA----------------------TACATTCATTT-------------------------------------------------------------------------AAAATCAT---------------TACAAAGTC----------------------------------------------------------AGGGATAGAGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAT---------------TACAAAGTC----------------------------------------------------------AGGGATAGAGA2420.50101000000000
droEre2
TATTA--A-AAAATA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAATAATAATAGTGAAATGTTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAAAAAA-------------------------------------------------------------------CATTATT-A----TAGA-----------T-----------GTAGCTCC---------------CATTAAAAAAATTATT--ATTTTGA------------------------------------------AAATTATATATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/18/2015 at 02:13 AM