ID:

dmo_2216

 Coordinate:

scaffold_6541:1340309-1340459 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

No conservation details.

-34.6 -34.2

Flybase annnotation

CDS [Dmoj\GI14173-cds]; exon [dmoj_GLEANR_14388:3]; intron [Dmoj\GI14173-in]

Repeatable elements

NameClassFamilyStrand
OSVALDO_I-intLTRGypsy-
mature
  1. scaffold_1746:2749-2772 -
  2. scaffold_3997:955-978 -
  3. scaffold_4229:2970-2993 -
  4. scaffold_5081:687-710 -
  5. scaffold_6175:4315-4338 -
  6. scaffold_6327:123007-123030 -
  7. scaffold_6336:81102-81125 -
  8. scaffold_6345:23260-23283 -
  9. scaffold_6385:43757-43780 -
  10. scaffold_6460:7688-7711 -
  11. scaffold_6471:31242-31265 -
  12. scaffold_6471:80006-80029 -
  13. scaffold_6482:55263-55286 -
  14. scaffold_6498:2132589-2132612 -
  15. scaffold_6500:30393123-30393146 -
  16. scaffold_6541:265006-265029 -
  17. scaffold_6541:504728-504751 -
  18. dmo_2216  scaffold_6541:1340336-1340359 -
  19. scaffold_6541:1640338-1640361 -
  20. scaffold_6680:23921003-23921026 -
  21. scaffold_68:2609-2632 +
  22. scaffold_773:1171-1194 +
  23. scaffold_1948:636-659 +
  24. scaffold_2144:4301-4324 +
  25. scaffold_3189:5885-5908 +
  26. scaffold_3725:1738-1761 +
  27. scaffold_3894:613-636 +
  28. scaffold_4034:1323-1346 +
  29. scaffold_4094:6314-6337 +
  30. scaffold_4315:16932-16955 +
  31. scaffold_5445:3131-3154 +
  32. scaffold_5862:2618-2641 +
  33. scaffold_5918:2155-2178 +
  34. scaffold_6111:32320-32343 +
  35. scaffold_6118:10961-10984 +
  36. scaffold_6327:81408-81431 +
  37. scaffold_6498:2246810-2246833 +
  38. scaffold_6541:136817-136840 +
  39. scaffold_6541:139541-139564 +
  40. scaffold_6541:554926-554949 +
  41. scaffold_6339:42304-42327 +
star
  1. scaffold_591:972-993 -
  2. scaffold_1746:2811-2832 -
  3. scaffold_3997:1017-1038 -
  4. scaffold_4078:584-605 -
  5. scaffold_4229:3032-3053 -
  6. scaffold_4592:10281-10302 -
  7. scaffold_5081:749-770 -
  8. scaffold_5820:6362-6383 -
  9. scaffold_6175:4377-4398 -
  10. scaffold_6385:43819-43840 -
  11. scaffold_6460:7750-7771 -
  12. scaffold_6482:55325-55346 -
  13. scaffold_6482:1423111-1423132 -
  14. scaffold_6498:2132651-2132672 -
  15. scaffold_6500:30393185-30393206 -
  16. scaffold_6540:1010215-1010236 -
  17. dmo_2216  scaffold_6541:1340398-1340419 -
  18. scaffold_6541:1640400-1640421 -
  19. scaffold_6541:2415055-2415076 -
  20. scaffold_6680:23921065-23921086 -
  21. scaffold_176:1007-1028 +
  22. scaffold_490:979-1000 +
  23. scaffold_1948:576-597 +
  24. scaffold_3673:942-963 +
  25. scaffold_4034:1263-1284 +
  26. scaffold_4094:6254-6275 +
  27. scaffold_4498:1213-1234 +
  28. scaffold_5445:3071-3092 +
  29. scaffold_5457:2968-2989 +
  30. scaffold_5918:2095-2116 +
  31. scaffold_6111:32255-32276 +
  32. scaffold_6118:10901-10922 +
  33. scaffold_6320:83044-83065 +
  34. scaffold_6327:81348-81369 +
  35. scaffold_6339:42244-42265 +
  36. scaffold_6496:26596606-26596627 +
  37. scaffold_6497:202488-202509 +
  38. dmo_1267  scaffold_6497:226007-226028 +
  39. scaffold_6540:91670-91691 +
  40. scaffold_6541:554866-554887 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TCCATCCGGTTGTCCGTGCTGAGACGTAGGCGCGTTTTGTTGGCCGATCCTCGCGCACTGGCCAGCGACTTTGCTGGAGCTGTGCGCGAATGAGGAGTGAGCCGCAAAATAGCAGCCGGCGTCAAAGCTCGACACCGGTGGCAGTTGCGAACGACATCGATGTGGCCAGCTCCCAACAGCAATCCAATTATGTGTCTGCAGCAGCGCCACCACGGAGTTCCAGCCGCAAACGGAGATCAGCGACGAGCCTT
******************************************************************************************...((((...((((((.....((.(((((.(((.......))).))))).))..................))))))...)))).***************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body		 V041
embryo
 V049
head
......................................................................................................................................................ACGACATCGATGTGGCCAGCTCCC............................................................................. 24 0 20 5.75 115 115 0 0 0 0
......................................................................................................................................................ACGACATCGATGTGGCCAGCTC............................................................................... 22 0 20 2.10 42 0 40 1 1 0
..................................................................................................................................................................................................................................CAAACGGAGATCAGCGACGAGCCT. 24 0 20 1.45 29 11 13 4 0 1
..................................................................................................................................................................................................................................CAAACGGAGATCAGCGACGAGC... 22 0 20 1.40 28 10 18 0 0 0
............................................................................................................................................................................................TATGTGTCTGCAGCAGCGCCACC........................................ 23 0 6 1.00 6 5 0 0 1 0
..................................................................................................................................................................................................................................CAAACGGAGATCAGCGACGAGCC.. 23 0 20 0.90 18 18 0 0 0 0
......................................................................................................................................................ACGACATCGATGTGGCCAGCTCCCAAC.......................................................................... 27 0 20 0.75 15 0 15 0 0 0
......................................................................................................................................................................................TCCAATTATGTGTCTGCAGCAGCGCC........................................... 26 0 7 0.57 4 0 4 0 0 0
............................................................................................................................................................................................TATGTGTCTGCAGCAGCGCCA.......................................... 21 0 6 0.33 2 1 0 1 0 0
...........................................................................................................................................................................................TTATGTGTCTGCAGCAGCGCCACCACAA.................................... 28 2 4 0.25 1 1 0 0 0 0
..............................................................................................................................................................................................TGTGTCTGCAGCAGCGCCACCACGG.................................... 25 0 4 0.25 1 1 0 0 0 0
............................................................................................................................................................................................TATGTGTCTGCAGCAGCGCCACCA....................................... 24 0 4 0.25 1 1 0 0 0 0
..............................................................................................................................................................................................TGTGTCTGCAGCGGCGCCACCA....................................... 22 1 4 0.25 1 1 0 0 0 0
..................................................................................................................................................................................................................................CAAACGGAGATCAGCGACGAGCCTT 25 0 20 0.25 5 4 1 0 0 0
......................................................................................................................................................ACCACATCGATGTGGCCAGCTCC.............................................................................. 23 1 20 0.25 5 0 5 0 0 0
......................................................................................................................................................ACGACATCGATGTGGCCAGCTCCCAACA......................................................................... 28 0 20 0.25 5 5 0 0 0 0
TCCATCCGGTTGTCCGTGCTGAGACG................................................................................................................................................................................................................................. 26 0 20 0.20 4 3 0 1 0 0
......................................................................................................................................................................................TCCAATTATGTGTCTGCAGCAGCGCCA.......................................... 27 0 6 0.17 1 1 0 0 0 0
............................................................................................................................................................................................TATGTGTCTGCAGCAGCGCCAC......................................... 22 0 6 0.17 1 0 0 0 1 0
......................................................................................................................................................ATGACATCGATGTGGCCAGCTCC.............................................................................. 23 1 20 0.15 3 0 3 0 0 0
......................................................................................................................................................ACGACATCGATGTAGCCAGCTCC.............................................................................. 23 1 20 0.15 3 0 3 0 0 0
..........................................................................................TGAGGAGTGAGCCGCAAAATAG........................................................................................................................................... 22 0 20 0.15 3 3 0 0 0 0
........................................................................................................CAAAATAGCAGCCGGCGTCAAAGC........................................................................................................................... 24 0 14 0.14 2 1 1 0 0 0
........................................................................................................CAAAATAGCAGCCGGCGTCAAAGCTCGA....................................................................................................................... 28 0 7 0.14 1 1 0 0 0 0
............................................................................................................................................................................................TATGTGCCTGCAGCAGCGCC........................................... 20 1 7 0.14 1 0 0 1 0 0
........................................................................................................CAAAATAGCAGCCGGCGTCAAAGCTCG........................................................................................................................ 27 0 7 0.14 1 1 0 0 0 0
............................................................................................................................................................................................TATGTGTCTGCAGCAGCGCC........................................... 20 0 7 0.14 1 1 0 0 0 0
.....................................................................................................................GGCGTCAAAGCTCGACACCGG................................................................................................................. 21 0 8 0.13 1 1 0 0 0 0
..........................................................................................TGAGGAGTGAGCCGCAAAATAGCAA........................................................................................................................................ 25 1 20 0.10 2 2 0 0 0 0
....................................TTGTTGGCCGATCCTCGCGCACTGG.............................................................................................................................................................................................. 25 0 20 0.10 2 2 0 0 0 0
......................................................................................................................................................ACGGCATCGATGTGGCCAGCTCC.............................................................................. 23 1 20 0.10 2 0 2 0 0 0
..........................................................................................TTAGGAGTGAGCCGCAAAATAGCAGC....................................................................................................................................... 26 1 20 0.10 2 0 2 0 0 0
.............................................................................................................................AGCTCGACACCGGTGGCAGTT......................................................................................................... 21 0 11 0.09 1 1 0 0 0 0
............................................................................................................................................GCAGTTGCGAACGACATCGATGTG....................................................................................... 24 0 20 0.05 1 1 0 0 0 0
.........TTGTCCGTGCTGAGACGTAGGCGCGTTT...................................................................................................................................................................................................................... 28 0 20 0.05 1 0 1 0 0 0
..........................................GCCGATCCTCGCGCACTGGCCAAC......................................................................................................................................................................................... 24 1 20 0.05 1 0 1 0 0 0
................................................................................................................................................TTCCGAACGACATCGATGTGGCC.................................................................................... 23 1 20 0.05 1 0 1 0 0 0
........................................................................GCTGGAGCTGTGCGCGAATGAGGA........................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0
..........................................................................................TGAGGAGTGAGCCGCAAAAT............................................................................................................................................. 20 0 20 0.05 1 1 0 0 0 0
..........................................................................................TTAGGAGTGAGCCGCAAAATAGCAGCC...................................................................................................................................... 27 1 20 0.05 1 0 1 0 0 0
.....................................................................................................................................................CAAGACATCGATGTGGCCAGCTCCC............................................................................. 25 2 20 0.05 1 0 1 0 0 0
..................................................................................................................................................................................................................................CAAACGGAGATCAGCGACGAGACT. 24 1 20 0.05 1 0 1 0 0 0
......................................................................................................................................................ACGACATCGATGTTGCCAGCTCC.............................................................................. 23 1 20 0.05 1 0 1 0 0 0
......................................................................................................................................................ACGACATCGATGTGGCCAG.................................................................................. 19 0 20 0.05 1 0 1 0 0 0
.......................................................................TGCTGGAGCTGTGCGCGAA................................................................................................................................................................. 19 0 20 0.05 1 1 0 0 0 0
..................................................................................................................................................................................................................................CAATCGTAGATCAGCGACGAGCC.. 23 2 20 0.05 1 0 1 0 0 0
..........................................................................................TTAGGAGAGAGCCGCAAAATAGCAGCCG..................................................................................................................................... 28 2 20 0.05 1 0 1 0 0 0
......................................................................................................................................................ACGACATCGATGTGGCCAGCTCCCC............................................................................ 25 1 20 0.05 1 0 1 0 0 0
......................................................................................................................................................ACGACATCGATGTTGCCAGCT................................................................................ 21 1 20 0.05 1 0 1 0 0 0
..................................................................................................................................................................................................................................TAAACGGAGATCAGCGACGAGCC.. 23 1 20 0.05 1 0 1 0 0 0
......................................................................................................................................................ATGACATCGATGTGGCCAGCTC............................................................................... 22 1 20 0.05 1 0 1 0 0 0
.............................................................................................GGAGTGAGCCGCAAAATAGCAGC....................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0
..........................................GCCTATCCTCGCGCACTGGCCAGCGA....................................................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0
......................................................................................................................................................ACAACATCGATGTGGCCAGCTCC.............................................................................. 23 1 20 0.05 1 0 1 0 0 0
..........................................................................................TGAGGAGTGAGCCGCAAAATAGCAGCCGG.................................................................................................................................... 29 0 20 0.05 1 0 0 1 0 0
.......................................................................................................GCAAAATAGCAGCCGGCGTC................................................................................................................................ 20 0 20 0.05 1 0 1 0 0 0
.................................................................................................................................................................................AGCAATCCAATTATGTGTCTGCA................................................... 23 0 20 0.05 1 1 0 0 0 0
..................................................................................................................................................................................................................................CAAACGGAGATCAGCGACGAGAC.. 23 1 20 0.05 1 0 1 0 0 0
..........................................................................................TGAGGAGTTAGCCGCAAAATAG........................................................................................................................................... 22 1 20 0.05 1 1 0 0 0 0
........................................................................GCTGGAGCTGTGCGCGAATGAGG............................................................................................................................................................ 23 0 20 0.05 1 1 0 0 0 0
................................................................................................................CACCCGGCGTCACTGCTCG........................................................................................................................ 19 3 20 0.05 1 0 0 1 0 0
..........................................................................................TTAGGAGTGAGCCGCAAAATAG........................................................................................................................................... 22 1 20 0.05 1 0 1 0 0 0
..........................................GCCGATCCTCGCGCACTGGCCAA.......................................................................................................................................................................................... 23 1 20 0.05 1 1 0 0 0 0
......................................................................................................................................................ACCACATCGATGTGGCCAGCTCCCAAC.......................................................................... 27 1 20 0.05 1 0 1 0 0 0
...................................................................................................................................................................................................................................AAACGGAGATCAGCGACGAGCCT. 23 0 20 0.05 1 1 0 0 0 0
...................................................................................................................................................................................CAATCCAATTATGTGTCTGCA................................................... 21 0 20 0.05 1 1 0 0 0 0
..............................CGCGTTTTGTTGGCCGATCCT........................................................................................................................................................................................................ 21 0 20 0.05 1 1 0 0 0 0
.................................................................................................................................CGACACCGGTGGCAGTTGCGA..................................................................................................... 21 0 20 0.05 1 1 0 0 0 0
..................................................................................................................................................................................................................................CGAACGGAGATCAGCGACGAGC... 22 1 20 0.05 1 0 1 0 0 0
..................................................................................................................................................................................................................................CAATCGGAGATCAGCGACGAGC... 22 1 20 0.05 1 0 1 0 0 0
..........................................................................................TTAGGAGTGAGCCGCAAAATAAC.......................................................................................................................................... 23 2 20 0.05 1 0 1 0 0 0
..................................................................................................................................................................................................................................CAAACGGAGATCAGCGACGAG.... 21 0 20 0.05 1 1 0 0 0 0
..............CGTGCTGAGACGTAGGCGCGTTTTG.................................................................................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0
......................................................................................................................................................ACGACATAGATGTGGCCAGC................................................................................. 20 1 20 0.05 1 0 0 0 1 0
......................................................................................CGAATGAGGAGTGAGCCGCAAA............................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0
......................................................................................................................................................ACGACATCGATGTGGCCTGCTCC.............................................................................. 23 1 20 0.05 1 0 1 0 0 0

Anti-sense strand reads

AGGTAGGCCAACAGGCACGACTCTGCATCCGCGCAAAACAACCGGCTAGGAGCGCGTGACCGGTCGCTGAAACGACCTCGACACGCGCTTACTCCTCACTCGGCGTTTTATCGTCGGCCGCAGTTTCGAGCTGTGGCCACCGTCAACGCTTGCTGTAGCTACACCGGTCGAGGGTTGTCGTTAGGTTAATACACAGACGTCGTCGCGGTGGTGCCTCAAGGTCGGCGTTTGCCTCTAGTCGCTGCTCGGAA
*****************************************************************************...((((...((((((.....((.(((((.(((.......))).))))).))..................))))))...)))).****************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V041
embryo
 V110
male body		 V056
head
 V049
head
.................................................................................................................................................................................................................GGTGCCTCAAGGTCGGCGTTTGCCTCT............... 27 0 3 42.33 127 114 13 0 0 0 0
.......................................................................................................................................GCCACCGTCAACGCTTGCTGTAGCT........................................................................................... 25 0 20 40.50 810 680 100 30 0 0 0
...........................................................................CCTCGACACGCGCTTACTCCTCACT....................................................................................................................................................... 25 0 20 26.75 535 531 0 0 4 0 0
..........................................................................ACCTCGACACGCGCTTACTCCTCACT....................................................................................................................................................... 26 0 20 11.75 235 235 0 0 0 0 0
....................................................................................................................................GTGGCCACCGTCAACGCTTGCTGTAGCT........................................................................................... 28 0 20 11.15 223 206 17 0 0 0 0
.........................................................................GACCTCGACACGCGCTTACTCCTCACT....................................................................................................................................................... 27 0 20 10.35 207 207 0 0 0 0 0
......................................................................................................................................GGCCACCGTCAACGCTTGCTGTAGCT........................................................................................... 26 0 20 7.85 157 0 154 0 0 3 0
............................CCGCGCAAAACAACCGGCTAGGAG....................................................................................................................................................................................................... 24 0 20 7.75 155 45 108 1 1 0 0
..................................................................................................................................................................................................................GTGCCTCAAGGTCGGCGTTTGCCTCT............... 26 0 3 5.67 17 14 3 0 0 0 0
...........................TCCGCGCAAAACAACCGGCTAGGAG....................................................................................................................................................................................................... 25 0 20 4.80 96 81 0 15 0 0 0
......................................................................................................................................GGCCACCGTCAACGCTTGCTGTAGC............................................................................................ 25 0 20 4.50 90 90 0 0 0 0 0
....................................................................GAAACGACCTCGACACGCGCTTACTCCT........................................................................................................................................................... 28 0 20 4.40 88 87 0 1 0 0 0
....................................................................................................................................................................................................................GCCTCAAGGTCGGCGTTTGCCTCT............... 24 0 3 4.00 12 8 2 0 2 0 0
...................................................................................................................................................................................................................TGCCTCAAGGTCGGCGTTTGCCTCT............... 25 0 3 4.00 12 9 3 0 0 0 0
........................................................................CGACCTCGACACGCGCTTACTCCTCACT....................................................................................................................................................... 28 0 20 3.90 78 78 0 0 0 0 0
........................................................................................................................................CCACCGTCAACGCTTGCTGTTGCT........................................................................................... 24 1 20 3.75 75 0 75 0 0 0 0
..........................................CGGCTAGGAGCGCGTGACCGGTCGCT....................................................................................................................................................................................... 26 0 20 3.40 68 43 25 0 0 0 0
.........................................................................................................................................CACCGTCAACGCTTGCTGTAGCT........................................................................................... 23 0 20 3.05 61 61 0 0 0 0 0
.........................................CCGGCTAGGAGCGCGTGACCGGTCGCT....................................................................................................................................................................................... 27 0 20 3.05 61 31 30 0 0 0 0
...........................................................................................................................................CCGTCAACGCTTGCTGTAGCT........................................................................................... 21 0 20 2.95 59 13 46 0 0 0 0
.........................CATCCGCGCAAAACAACCGGCTAGGAG....................................................................................................................................................................................................... 27 0 20 2.50 50 28 13 2 7 0 0
.............................................................................TCGACACGCGCTTACTCCTCACT....................................................................................................................................................... 23 0 20 2.30 46 26 19 0 1 0 0
...........................................................................CCTCGACACGCGCTTACTCCTCAGT....................................................................................................................................................... 25 1 20 1.95 39 0 39 0 0 0 0
...............................................................................................................................................................................TGTCGTTAGGTTAATACACAGACGT................................................... 25 0 20 1.80 36 24 0 8 4 0 0
..........................ATCCGCGCAAAACAACCGGCTAGGAG....................................................................................................................................................................................................... 26 0 20 1.70 34 31 3 0 0 0 0
.....................................................................................................................................................................................................................CCTCAAGGTCGGCGTTTGCCTCT............... 23 0 3 1.67 5 3 2 0 0 0 0
........................................................................................................................................CCACCGTCAACGCTTGCTGTAGC............................................................................................ 23 0 20 1.65 33 33 0 0 0 0 0
...............................................................................................................................................................................TGTCGTTAGGTTAATACACAGAC..................................................... 23 0 20 1.50 30 10 0 10 10 0 0
............................................................................................................................................................................GGTTGTCGTTAGGTTAATACACAGAC..................................................... 26 0 20 1.45 29 26 2 1 0 0 0
........................................................................................................................................CCACCGTCAACGCTTGCTGTAGCT........................................................................................... 24 0 20 1.40 28 0 0 8 20 0 0
...........................................................................CCTCGACACGCGCTTACTCCTCAC........................................................................................................................................................ 24 0 20 1.25 25 23 2 0 0 0 0
..............................................................................CGACACGCGCTTACTCCTCACT....................................................................................................................................................... 22 0 20 1.20 24 11 13 0 0 0 0
......................................................................AACGACCTCGACACGCGCTTACTCCT........................................................................................................................................................... 26 0 20 1.20 24 23 0 1 0 0 0
.......................................................................ACGACCTCGACACGCGCTTACTCCTCACT....................................................................................................................................................... 29 0 20 1.10 22 22 0 0 0 0 0
.................................................................................................................................................................................................................GGTGCCTCAAGGTCGGCGTTTGCCTC................ 26 0 3 1.00 3 3 0 0 0 0 0
..................................................................................................................................................................................................................GTGCCTCAAGGTCGGCGTTTGCCTC................ 25 0 3 1.00 3 3 0 0 0 0 0
.............................CGCGCAAAACAACCGGCTAGGAG....................................................................................................................................................................................................... 23 0 20 0.90 18 0 16 2 0 0 0
...........................TCCGCGCAAAACAACCGGCTAGGGG....................................................................................................................................................................................................... 25 1 20 0.85 17 0 17 0 0 0 0
......................................................................................................................................GGCCACCGTCAACGCTTGCTGTAGGT........................................................................................... 26 1 20 0.70 14 0 14 0 0 0 0
.........................................................................GACCTCGACACGCGCTTACTCCTCAC........................................................................................................................................................ 26 0 20 0.70 14 14 0 0 0 0 0
......................................................................................................................................................................................................................CTCAAGGTCGGCGTTTGCCTCT............... 22 0 3 0.67 2 0 2 0 0 0 0
............................CCGCGCAAAACAACCGGCTAGGGG....................................................................................................................................................................................................... 24 1 20 0.60 12 0 12 0 0 0 0
...........................................................................CCTCGACACGCGCTTACTCCTCACTC...................................................................................................................................................... 26 0 20 0.55 11 2 9 0 0 0 0
...............................CGCAAAACAACCGGCTAGGAG....................................................................................................................................................................................................... 21 0 20 0.55 11 4 7 0 0 0 0
..............................................................................................................................................TCAACGCTTGCTGTAGCT........................................................................................... 18 0 20 0.50 10 6 4 0 0 0 0
............................................................................................................................................CGTCAACGCTTGCTGTAGCT........................................................................................... 20 0 20 0.45 9 8 0 0 0 0 1
...........................................................................................................TTATCGTCGGCCGCAGTTTCGAGCT....................................................................................................................... 25 0 7 0.43 3 2 1 0 0 0 0
....................................................................GAAACGACCTCGACACGCGCTTACTCC............................................................................................................................................................ 27 0 20 0.40 8 8 0 0 0 0 0
...........................................................................................................................................................................GGGTTGTCGTTAGGTTAATACACAGAC..................................................... 27 0 20 0.40 8 7 1 0 0 0 0
........................................................................CGACCTCGACACGCGCTTACTCCTCAC........................................................................................................................................................ 27 0 20 0.35 7 7 0 0 0 0 0
.............................................................................................................................................................................GTTGTCGTTAGGTTAATACACAGAC..................................................... 25 0 20 0.35 7 6 0 0 1 0 0
...........................................................................................................................................................................GGGTTGTCGTTAGGTTAATACACAGA...................................................... 26 0 20 0.35 7 5 2 0 0 0 0
..................................................................................................................................................................................................................GTGCCTCAAGGTCGGCGTTTGCCTGT............... 26 1 3 0.33 1 0 1 0 0 0 0
....................................................................................................................................................................................................................GCCTCAAGGTCGGCGTTTGCCCCT............... 24 1 3 0.33 1 0 1 0 0 0 0
........................................................................................................................................................................................................................CAAGGTCGGCGTTTGCCTCTAGTCGCTA....... 28 1 3 0.33 1 1 0 0 0 0 0
................................................................................................................................................................................................................CGGTGCCTCAAGGTCGGCGTTTGCCTCT............... 28 1 3 0.33 1 0 1 0 0 0 0
..................................................................................................................................................................................................................CTGCCTCAAGGTCGGCGTTTGCCTCT............... 26 1 3 0.33 1 1 0 0 0 0 0
.................................................................................................................................................................................................................GGTGCCTCAAGGTCGGCATTTGCCTCT............... 27 1 3 0.33 1 0 1 0 0 0 0
.....................................................................................................................................................................................................................CCTCAAGGTCGGCGTTTGCCT................. 21 0 3 0.33 1 0 1 0 0 0 0
..................................................................................................................................................................................................................GTGCCTCAGGGTCGGCGTTTGCCTCT............... 26 1 3 0.33 1 0 0 1 0 0 0
.................................................................................................................................................................................................................GGTGCCTCAAGGTCGGCGTTGG.................... 22 1 3 0.33 1 0 1 0 0 0 0
...................................................................................................................................................................................................................TGCCTCAGGGTCGGCGTTTGCCTCT............... 25 1 3 0.33 1 0 0 1 0 0 0
....................................................................................................................................................................................................................GCCTCAGGGTCGGCGTTTGCCTCT............... 24 1 3 0.33 1 0 0 1 0 0 0
................................................................................................................................................................................................................AGGTGCCTCAAGGTCGGCGTTTGCCTCT............... 28 1 3 0.33 1 1 0 0 0 0 0
.....................................................................................................................................................................................................................CCTCAAGGTCGGCGTTTGCCCCT............... 23 1 3 0.33 1 0 1 0 0 0 0
.................................................................................................................................................................................................................GGTGCCTCAAGGTCGGCGTTTGCCT................. 25 0 3 0.33 1 1 0 0 0 0 0
....................................................................................................................................................................................................................GCCTCAAGGTCGGCGTTTGCCTC................ 23 0 3 0.33 1 1 0 0 0 0 0
..................................................................................................................................................................................................................GTGCCTCAAGGTCGGCGTTTGCCT................. 24 0 3 0.33 1 1 0 0 0 0 0
.................................................................................................................................................................................................................GGTGCCTCAGGGTCGGCGTTTGCCTCT............... 27 1 3 0.33 1 1 0 0 0 0 0
.......................................................................................................................................................................................................................TCAAGGTCGGCGTTTGCCTCTAG............. 23 0 3 0.33 1 1 0 0 0 0 0
.................................................................................................................................................................................................................GGTGCCTCAAGGTCGGCGTTTGCC.................. 24 0 3 0.33 1 1 0 0 0 0 0
..........................................................................ACCTCGACACGCGCTTACTCCTCACTC...................................................................................................................................................... 27 0 20 0.30 6 5 1 0 0 0 0
.....................................................................................................................................TGGCCACCGTCAACGCTTGCTGTTGCT........................................................................................... 27 1 20 0.30 6 0 6 0 0 0 0
...........................................................................CCTCGACACGCGCTTACTCCT........................................................................................................................................................... 21 0 20 0.30 6 0 6 0 0 0 0
...........................TCCGCGCAAAACAACCGGCTAGGA........................................................................................................................................................................................................ 24 0 20 0.30 6 6 0 0 0 0 0
................................................................................................................................................................................GTCGTTAGGTTAATACACAGACGTCGT................................................ 27 0 10 0.30 3 3 0 0 0 0 0
............................CCGCGCAAAACAACCGGCTATGAG....................................................................................................................................................................................................... 24 1 20 0.25 5 0 5 0 0 0 0
........................................................................................................................................CCACCGTCAACGCTTGCTGT............................................................................................... 20 0 20 0.25 5 1 4 0 0 0 0
.............................................CTAGGAGCGCGTGACCGGTCGCT....................................................................................................................................................................................... 23 0 20 0.25 5 5 0 0 0 0 0
........................................................................................................................................CCACCGTCAACCCTTGCTGTAGCT........................................................................................... 24 1 20 0.25 5 0 5 0 0 0 0
............................CCGCGCAAAACAACCGGCTAGGAGCGCGT.................................................................................................................................................................................................. 29 0 20 0.25 5 0 4 0 1 0 0
.......................................................................ACGACCTCGACACGCGCTTACTCCT........................................................................................................................................................... 25 0 20 0.25 5 0 5 0 0 0 0
.......................................................................................................................................GCCACCGTCAACGCTTGCTGTTGCT........................................................................................... 25 1 20 0.20 4 0 4 0 0 0 0
.GGTAGGCCAACAGGCACGACTCT................................................................................................................................................................................................................................... 23 0 20 0.20 4 1 0 3 0 0 0
...TAGGCCAACAGGCACGACTCTGCAT............................................................................................................................................................................................................................... 25 0 20 0.20 4 3 1 0 0 0 0
...................................................................................................................................AGTGGCCACCGTCAACGCTTGCTGTAGCT........................................................................................... 29 1 20 0.20 4 4 0 0 0 0 0
......................................................................................................................................AGCCACCGTCAACGCTTGCTGTAGCT........................................................................................... 26 1 20 0.20 4 0 4 0 0 0 0
........................................................................CGACCTCGACACGCGCTTACTCCT........................................................................................................................................................... 24 0 20 0.20 4 0 0 4 0 0 0
............................................................................CTCGACACGCGCTTACTCCTCAC........................................................................................................................................................ 23 0 20 0.20 4 4 0 0 0 0 0
................................................................................................................................................................................GTCGTTAGGTTAATACACAGACGT................................................... 24 0 20 0.20 4 3 0 0 1 0 0
........................................................................................................................................CCACCCTCAACGCTTGCTGTAGCT........................................................................................... 24 1 20 0.20 4 0 4 0 0 0 0
..............................................................................................................................................................................TTGTCGTTAGGTTAATACACAGAC..................................................... 24 0 20 0.20 4 3 0 0 1 0 0
........................................................................................................................................CCACCGTCAACGCTTGCTGTAGCA........................................................................................... 24 1 20 0.20 4 0 4 0 0 0 0
............................................................................................................................................................................GGTTGTCGTTAGGTTAATACACAGA...................................................... 25 0 20 0.20 4 4 0 0 0 0 0
.....................................................................................................................................................................................TAGGTTAATACACAGACGTCGTCGCGGT.......................................... 28 0 6 0.17 1 1 0 0 0 0 0
............................................................................CTCGACACGCGCTTACTCCTCACT....................................................................................................................................................... 24 0 20 0.15 3 0 0 0 3 0 0
..............................................................................................................................................................................TTGTCGTTAGGTTAATACACAGACGT................................................... 26 0 20 0.15 3 3 0 0 0 0 0
...............................................................................................................................................CAACGCTTGCTGTAGCTACACCGGT................................................................................... 25 0 20 0.15 3 3 0 0 0 0 0
...............................................................................................................................................................................TGTCGTTAGGTTAATACACAGACG.................................................... 24 0 20 0.15 3 3 0 0 0 0 0
......................................................................AACGACCTCGACACGCGCTTACTCC............................................................................................................................................................ 25 0 20 0.15 3 3 0 0 0 0 0
............................CCGCGCAAAACAACCGGCTAGGA........................................................................................................................................................................................................ 23 0 20 0.15 3 3 0 0 0 0 0
......................................................................................................................................TGCCACCGTCAACGCTTGCTGTAGCT........................................................................................... 26 1 20 0.15 3 2 0 1 0 0 0
..................................................................................................................................................................................CGTTAGGTTAATACACAGAC..................................................... 20 0 20 0.15 3 0 2 1 0 0 0
..........................................................................................ACTCCTCACTCGGCGTTTTATCGT......................................................................................................................................... 24 0 20 0.15 3 3 0 0 0 0 0
...........................................................................CCTCGACACGCGCTTACTC............................................................................................................................................................. 19 0 20 0.15 3 3 0 0 0 0 0
...................................................................................................................................TGTGGCCACCGTCAACGCTTGCTGTAGCT........................................................................................... 29 0 20 0.15 3 3 0 0 0 0 0
...........................................GGCTAGGAGCGCGTGACCGGTCGCT....................................................................................................................................................................................... 25 0 20 0.15 3 0 3 0 0 0 0
...........................GCCGCGCAAAACAACCGGCTAGGAG....................................................................................................................................................................................................... 25 1 20 0.15 3 0 3 0 0 0 0
............................CCGCGCAAAACAACCGGCTAGCAG....................................................................................................................................................................................................... 24 1 20 0.15 3 0 3 0 0 0 0
.........................................................................................................................................CACCGTCAACGCTTGCTGTTGCT........................................................................................... 23 1 20 0.15 3 0 3 0 0 0 0
.....................................................................................................................................TGTCCACCGTCAACGCTTGCTGTAGCT........................................................................................... 27 1 20 0.15 3 0 3 0 0 0 0
.......................................................................ACGACCTCGACACGCGCTTACTCCTCAC........................................................................................................................................................ 28 0 20 0.15 3 3 0 0 0 0 0
...........................................................................CCTCGACACGCGCTTACTCC............................................................................................................................................................ 20 0 20 0.15 3 2 1 0 0 0 0
............................CCGCGCAAAACAACCGGCTAGGTG....................................................................................................................................................................................................... 24 1 20 0.15 3 0 3 0 0 0 0
.......................................................................................................................................GCCACCGTCAACGCTTGCTGTACCT........................................................................................... 25 1 20 0.15 3 0 3 0 0 0 0
.....................................................................................................................................TGGCCACCGTCAACGCTTGCTGTAGCT........................................................................................... 27 0 20 0.15 3 0 0 0 3 0 0
........................GCATCCGCGCAAAACAACCGGCTAGGA........................................................................................................................................................................................................ 27 0 20 0.15 3 3 0 0 0 0 0
...........................................................................CCGCGACACGCGCTTACTCCTCACT....................................................................................................................................................... 25 1 20 0.15 3 0 3 0 0 0 0
......................................................................................................................................GGCCACCGTCAACGCTTGCTGTACCT........................................................................................... 26 1 20 0.15 3 0 3 0 0 0 0
AGGTAGGCCAACAGGCACGACTCT................................................................................................................................................................................................................................... 24 0 20 0.15 3 3 0 0 0 0 0
...............................................................................GACACGCGCTTACTCCTCACT....................................................................................................................................................... 21 0 20 0.15 3 1 2 0 0 0 0
............................................................................................................TATCGTCGGCCGCAGTTTCGAGCT....................................................................................................................... 24 0 7 0.14 1 1 0 0 0 0 0
.........................................................................................................CTTTATCGTCGGCCGCAGTTTCGAGCT....................................................................................................................... 27 1 7 0.14 1 1 0 0 0 0 0
............................................................................................................................................................................................ATACACAGACGTCGTCGCGG........................................... 20 0 7 0.14 1 1 0 0 0 0 0
.......................................................................................................................................................................................GGTTAATACACAGACGTCGTCGCGG........................................... 25 0 7 0.14 1 1 0 0 0 0 0
..........................................................................................................CTTATCGTCGGCCGCAGTTTCGAGCT....................................................................................................................... 26 1 7 0.14 1 1 0 0 0 0 0
..............................................................................................................ATCTCGGCCGCAGTTTCGAGCT....................................................................................................................... 22 3 8 0.13 1 1 0 0 0 0 0
............................................................................................................................................................................GGTTGTCGTTAGGTTAATACACAG....................................................... 24 0 20 0.10 2 2 0 0 0 0 0
.....................................................................................................................................................................GGTCGAGGGTTGTCGTTAGGTT................................................................ 22 0 20 0.10 2 2 0 0 0 0 0
........................................................................TGACCTCGACACGCGCTTACTCCTCACT....................................................................................................................................................... 28 1 20 0.10 2 0 2 0 0 0 0
..........................................................................TCCTCGACACGCGCTTACTCCTCACT....................................................................................................................................................... 26 1 20 0.10 2 0 2 0 0 0 0
.GGTAGGCCAACAGGCACGACTCTGCAT............................................................................................................................................................................................................................... 27 0 20 0.10 2 1 0 0 1 0 0
........................................................................................................................................CCACCGTCAACGCTTGCTGTAGCTAC......................................................................................... 26 0 20 0.10 2 0 2 0 0 0 0
...........................................................................CCTCGACACGCGCTTACT.............................................................................................................................................................. 18 0 20 0.10 2 0 2 0 0 0 0
...............................................................................................................................................................................TGTCGTTAGGTTAATACACAGA...................................................... 22 0 20 0.10 2 1 1 0 0 0 0
...............................................................................................................................................................................TGTCGTTAGGTTAATACACAGACTT................................................... 25 1 20 0.10 2 0 2 0 0 0 0
................................GCAAAACAACCGGCTAGGAG....................................................................................................................................................................................................... 20 0 20 0.10 2 2 0 0 0 0 0
..................................................................................................................................................................................CGTTAGGTTAATACACAGACGT................................................... 22 0 20 0.10 2 1 1 0 0 0 0
..........................TTCCGCGCAAAACAACCGGCTAGGAG....................................................................................................................................................................................................... 26 1 20 0.10 2 0 2 0 0 0 0
...........................................................................CCTCGACACGCGCCTACTCCTCACT....................................................................................................................................................... 25 1 20 0.10 2 2 0 0 0 0 0
............................................................................................................................................................................GGTTGTCGTTAGGTTAATACACA........................................................ 23 0 20 0.10 2 2 0 0 0 0 0
...........................................................................CCTCGACACGCGCTTACTCCTC.......................................................................................................................................................... 22 0 20 0.10 2 2 0 0 0 0 0
.........................................................................AACCTCGACACGCGCTTACTCCTCAC........................................................................................................................................................ 26 1 20 0.10 2 2 0 0 0 0 0
.........................................................................GACCTCGACACGCGCTTACTCCTCACTT...................................................................................................................................................... 28 1 20 0.10 2 2 0 0 0 0 0
...............................................................................................................................................................................CGTCGTTAGGTTAATACACAGAC..................................................... 23 1 20 0.10 2 0 2 0 0 0 0
.......................................................................................CTTACTCCTCACTCGGCGTTTTATCGT......................................................................................................................................... 27 0 20 0.10 2 2 0 0 0 0 0
..............................................................................................................................................................................TTGTCGTTAGGTTAATACACAGA...................................................... 23 0 20 0.10 2 1 0 0 1 0 0
.........................TATCCGCGCAAAACAACCGGCTAGGAG....................................................................................................................................................................................................... 27 1 20 0.10 2 0 0 0 2 0 0
......................................CAACCGGCTAGGAGCGCGTGACCGTT........................................................................................................................................................................................... 26 1 20 0.10 2 0 2 0 0 0 0
........................................................................................................................................CCACCGTCAACTCTTGCTGTAGCT........................................................................................... 24 1 20 0.10 2 0 2 0 0 0 0
.............................................................................................................................................................................GTTGTCGTTAGGTTAATACACAGACGT................................................... 27 0 20 0.10 2 2 0 0 0 0 0
........................................................................................................................................ACACCGTCAACGCTTGCTGTAGCT........................................................................................... 24 1 20 0.10 2 2 0 0 0 0 0
.........................CATCCGCGCAAAACAACCGGCTAGGA........................................................................................................................................................................................................ 26 0 20 0.10 2 2 0 0 0 0 0
...........................................................................CCTCGACACGCGCTTACTCCTCACG....................................................................................................................................................... 25 1 20 0.10 2 0 2 0 0 0 0
.................................................................................CACGCGCTTACTCCTCACTCGGCGTTT............................................................................................................................................... 27 0 20 0.10 2 2 0 0 0 0 0
................................................................CGCTGAAACGACCTCGACACGCGCTT................................................................................................................................................................. 26 0 20 0.10 2 2 0 0 0 0 0
...........................................................................................................................................CCGTCAACGCTTGCTGTAGCTACACC...................................................................................... 26 0 20 0.10 2 0 2 0 0 0 0
........................................................................................................................................CCACCGTCAACGGTTGCTGTAGCT........................................................................................... 24 1 20 0.10 2 2 0 0 0 0 0
........................................................................................................................................CCACCTTCAACGCTTGCTGTAGCT........................................................................................... 24 1 20 0.10 2 0 2 0 0 0 0
........................................................................................................................................................................CGAGGGTTGTCGTTAGGTTAATAC........................................................... 24 0 20 0.10 2 2 0 0 0 0 0
.....................................................................................................GGCGTTTTATCGTCGGCCGCAGTTT............................................................................................................................. 25 0 20 0.10 2 0 2 0 0 0 0
...........................TCCGCGCAAAACAACCGTCTAGGAG....................................................................................................................................................................................................... 25 1 20 0.10 2 0 1 0 1 0 0
...........................................................................CCTCGACACGCGCTTACTCCTGACT....................................................................................................................................................... 25 1 20 0.10 2 0 2 0 0 0 0
.........................CATCCGCGCAAAACAACCGGCTAGGGG....................................................................................................................................................................................................... 27 1 20 0.10 2 0 2 0 0 0 0
..............................................................................................................................................TCAACGCTTGCTGTAGCTACACCG..................................................................................... 24 0 20 0.10 2 0 2 0 0 0 0
................................................GGAGCGCGTGACCGGTCGCT....................................................................................................................................................................................... 20 0 20 0.10 2 2 0 0 0 0 0
..........................................................................................................................................................................AGGGTTGTCGTTAGGTTAATACACAGA...................................................... 27 0 20 0.10 2 1 0 0 1 0 0
........................................................................................................................................................................CGAGGGTTGTCGTTAGGTTAATACACA........................................................ 27 0 20 0.10 2 0 2 0 0 0 0
..GTAGGCCAACAGGCACGACTCT................................................................................................................................................................................................................................... 22 0 20 0.10 2 2 0 0 0 0 0
.....................................................................................................................................TGGCCACCGTCAACGCTTGCTGTAG............................................................................................. 25 0 20 0.10 2 2 0 0 0 0 0
..........................................................................................................................................................................AGGGTTGTCGTTAGGTTAATA............................................................ 21 0 20 0.10 2 0 0 0 2 0 0
........................................TCCGGCTAGGAGCGCGTGACCGGTCGCT....................................................................................................................................................................................... 28 1 20 0.10 2 0 2 0 0 0 0
...........................CCCGCGCAAAACAACCGGCTAGGGG....................................................................................................................................................................................................... 25 2 20 0.10 2 0 2 0 0 0 0
........................................................................................................................................CCACCGTCAACGCTTGTTGTAGCT........................................................................................... 24 1 20 0.10 2 0 2 0 0 0 0
..........................................................................................................................................ACCGTCAACGCTTGCTGTAGCT........................................................................................... 22 0 20 0.10 2 0 1 0 1 0 0
.........................................................................GACCTCGACACGCGCTTACTCCTTACT....................................................................................................................................................... 27 1 20 0.10 2 1 1 0 0 0 0
..........................................................................................................................................................................AGGGTTGTCGTTAGGTTAATACACAGAC..................................................... 28 0 20 0.10 2 1 0 0 1 0 0
......................................................................................................................................GGCCACCGTCAACGCTTGCTGTAGCTAC......................................................................................... 28 0 20 0.10 2 2 0 0 0 0 0
................................GCAAAACAACCGGCTAGGAGCGCGT.................................................................................................................................................................................................. 25 0 20 0.10 2 1 1 0 0 0 0
......................................................................................................................................GGCCACCGTCAACGGTTGCTGTAGCT........................................................................................... 26 1 20 0.10 2 2 0 0 0 0 0
.........................................CCGGCTAGGAGCGCGTGACCTGTCGCT....................................................................................................................................................................................... 27 1 20 0.10 2 0 2 0 0 0 0
.GGTAGGCCAACAGGCACGACT..................................................................................................................................................................................................................................... 21 0 20 0.10 2 1 0 1 0 0 0
...........................TCCGCGCAAAACAACCGGCTATGAG....................................................................................................................................................................................................... 25 1 20 0.10 2 0 2 0 0 0 0
.....................TCTGCATCCGCGCAAAACAACCGGCT............................................................................................................................................................................................................ 26 0 15 0.07 1 1 0 0 0 0 0
.......................TGCATCCGCGCAAAACAACCGGCTAGGAG....................................................................................................................................................................................................... 29 0 15 0.07 1 0 1 0 0 0 0
................ACGACTCTGCATCCGCGCAAAACAA.................................................................................................................................................................................................................. 25 0 16 0.06 1 1 0 0 0 0 0
.................CGACTCTGCATCCGCGCAAAACAACCG............................................................................................................................................................................................................... 27 0 16 0.06 1 1 0 0 0 0 0
......................CTGCATCCGCGCAAGACAACCGGCTA........................................................................................................................................................................................................... 26 1 17 0.06 1 1 0 0 0 0 0
...........CAGGCACGACTCTGCATCCGCGCAAAA..................................................................................................................................................................................................................... 27 0 18 0.06 1 1 0 0 0 0 0
.............................CGCGCAAAACAACCGGCTAGGGG....................................................................................................................................................................................................... 23 1 20 0.05 1 0 1 0 0 0 0
.........................................................................................................................................................................GAGGGTTGTCGTTAGGTTAATACACAG....................................................... 27 0 20 0.05 1 1 0 0 0 0 0
...........................................................................CCTCGACACGCGCTTACTCCTCACTGGAA................................................................................................................................................... 29 3 20 0.05 1 1 0 0 0 0 0
.........................................................................................................................................................................GAGGGTTGTCGTTAGGTTAATACACAGA...................................................... 28 0 20 0.05 1 1 0 0 0 0 0
........................................................................CGACCTCGACACCCGCTTACTCCTCACT....................................................................................................................................................... 28 1 20 0.05 1 0 1 0 0 0 0
...........................................................................................................................................CCGTCAACGCTTGCTGTAGCTACACCG..................................................................................... 27 0 20 0.05 1 0 1 0 0 0 0
.....................................ACAACCGGCTAGGAGCGCGTGACCGG............................................................................................................................................................................................ 26 0 20 0.05 1 1 0 0 0 0 0
............................................................................................................................................CGTCAACGCTTGCTGTAGCTACACCG..................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0
......................................................................................................................................GGCCACCGTCAACGCTTCCTGTTGCT........................................................................................... 26 2 20 0.05 1 0 1 0 0 0 0
............................CCGCGCAAAACAACCGGCTAGGAGCGC.................................................................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0 0 0
.......................................................................ACGACCTCGACACGCGCTTACTC............................................................................................................................................................. 23 0 20 0.05 1 1 0 0 0 0 0
......................................................................................................................................GGCCACCGTCAACGCTTGATGTAGCT........................................................................................... 26 1 20 0.05 1 0 1 0 0 0 0
...................................................................................CGCGCTTACTCCTCACTCGGCGTTTTAT............................................................................................................................................ 28 0 20 0.05 1 1 0 0 0 0 0
....................................................................................................CGGCGTTTTATCGTCGGCCGCAGTTTC............................................................................................................................ 27 0 20 0.05 1 1 0 0 0 0 0
........................................................................................................................................CCACCGTCAACGCTTGCTATAGCT........................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0
..................................................................................................................................................................ACCGGTCGAGGGTTGTCGTTA.................................................................... 21 0 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................................ACACCGGTCGAGGGTTGTCGT...................................................................... 21 0 20 0.05 1 1 0 0 0 0 0
..............................GCGCAAAACAACCGGCTAGGAG....................................................................................................................................................................................................... 22 0 20 0.05 1 0 0 1 0 0 0
.........................CATCCGCGCAAAACAACCGGCTCTGAG....................................................................................................................................................................................................... 27 2 20 0.05 1 0 1 0 0 0 0
.....................................................................................................GGCGTTTTATCGTCGGCCGCATTTT............................................................................................................................. 25 1 20 0.05 1 0 1 0 0 0 0
........................................................................................................................................CCACCGTCAACGCTTGCTGTAGCTT.......................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0
...........................TCCGCGCAAAACAACCGGCGA........................................................................................................................................................................................................... 21 1 20 0.05 1 0 1 0 0 0 0
....................................................................................GCGCTTACTCCTCACTCGGCGTTT............................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0 0
...........................TCCGCGCAAAACAACCGACTAGGAG....................................................................................................................................................................................................... 25 1 20 0.05 1 0 0 0 1 0 0
..GTAGGCCAACAGGCACGACTCTGCA................................................................................................................................................................................................................................ 25 0 20 0.05 1 1 0 0 0 0 0
.........................................CCGGCTAGGAGCGCGTGACCGGTCGCTC...................................................................................................................................................................................... 28 1 20 0.05 1 0 1 0 0 0 0
.............................................................................................................................................................................CTTGTCGTTAGGTTAATACACAGACGT................................................... 27 1 20 0.05 1 1 0 0 0 0 0
...........................................................................................................................................................................GGGTTGTCGTTAGGTTAATACACTGGC..................................................... 27 2 20 0.05 1 0 1 0 0 0 0
.GGTAGGCCAACAGGCACGACTCTG.................................................................................................................................................................................................................................. 24 0 20 0.05 1 1 0 0 0 0 0
................................................................................................................................................................ACACCGGTCGAGGGTTGTCGTT..................................................................... 22 0 20 0.05 1 1 0 0 0 0 0
...................................................................................................................................................................CCGGTCGAGGGTTGTCGTTATGTTA............................................................... 25 1 20 0.05 1 0 1 0 0 0 0
........................................................................................................................................CCACCGTCAACGCTTGCGGTTGCT........................................................................................... 24 2 20 0.05 1 0 1 0 0 0 0
....................................................................................................................................GTGGCCACCGTCAACGCT..................................................................................................... 18 0 20 0.05 1 1 0 0 0 0 0
..............................GCGCAAAACAACCGGCTAGGAGCGCGT.................................................................................................................................................................................................. 27 0 20 0.05 1 1 0 0 0 0 0
..........................................................................ACCTCGACACGCGCTTACT.............................................................................................................................................................. 19 0 20 0.05 1 1 0 0 0 0 0
........................................................................................................................................CCCCCGTCAACGCTTGCTGTACCT........................................................................................... 24 2 20 0.05 1 0 1 0 0 0 0
............................CCGCTCAAAACAACCGGCTAGGAG....................................................................................................................................................................................................... 24 1 20 0.05 1 0 1 0 0 0 0
...........................................................................................................................................................................GGGTTGTCGTTAGCTTAATACACAGAC..................................................... 27 1 20 0.05 1 1 0 0 0 0 0
...........................TCCGCGAAAAACAACCGGCTAGGAG....................................................................................................................................................................................................... 25 1 20 0.05 1 0 1 0 0 0 0
...................................................GCGCGTGACCGGTCGCTGAAACGAC............................................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0
..TTAGGCCAACAGGCACGACTCTGCA................................................................................................................................................................................................................................ 25 1 20 0.05 1 1 0 0 0 0 0
.......................................................................................................................................GCCACCGTCAACGCTTGCTGTAGCTG.......................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0
...................................................................................................TCGGCGTTTTATCGTCGGCCGCAGTT.............................................................................................................................. 26 0 20 0.05 1 1 0 0 0 0 0
............................CAGCGCAAAACAACCGGCTAGGAG....................................................................................................................................................................................................... 24 1 20 0.05 1 0 1 0 0 0 0
...CAGGCCAACAGGAACGACTCTGCAT............................................................................................................................................................................................................................... 25 2 20 0.05 1 0 1 0 0 0 0
...................................................................................................................................................................................GTTAGGTTAATACACAGACGT................................................... 21 0 20 0.05 1 1 0 0 0 0 0
..........................................................................................................................................ACCGTCAACGCTTGCTGTTGCT........................................................................................... 22 1 20 0.05 1 0 1 0 0 0 0
.....................................................................................................................................................................GGTCGAGGGTTGTCGTTAGGTTA............................................................... 23 0 20 0.05 1 0 0 0 1 0 0
...CAGGCCAACAGGCACGACTCTGCAT............................................................................................................................................................................................................................... 25 1 20 0.05 1 0 1 0 0 0 0
...............................................................................................................................................................AACACCGGTCGAGGGTTGTCGTTAGGTT................................................................ 28 1 20 0.05 1 1 0 0 0 0 0
......................................................................................................................................................................GTCGAGGGTTGTCGTTAGGT................................................................. 20 0 20 0.05 1 0 0 0 1 0 0
........................................CCCGGCTAGGAGCGCGTGACCGGTCGCT....................................................................................................................................................................................... 28 1 20 0.05 1 0 1 0 0 0 0
........................................................................................TTACTCCTCACTCGGCGTTTTATCG.......................................................................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0
.......................................................................................................................................................................CCGAGGGTTGTCGTTAGGTTAAT............................................................. 23 1 20 0.05 1 0 1 0 0 0 0
...........................................................................CCTCGACACGCGCTTACTCCGCACTC...................................................................................................................................................... 26 1 20 0.05 1 0 1 0 0 0 0
.....................................................................................................................................TGGCCACCGTCAACGCTTGCTATAGC............................................................................................ 26 1 20 0.05 1 1 0 0 0 0 0
...........................................................................CCTAGACACGCGATTACTCCTCACT....................................................................................................................................................... 25 2 20 0.05 1 0 1 0 0 0 0
...........................TCCGCGCAAAACCACCGGCTAGGAG....................................................................................................................................................................................................... 25 1 20 0.05 1 0 1 0 0 0 0
...............................CGCAAAACAACCGGCTAGGAGCGCGTGAC............................................................................................................................................................................................... 29 0 20 0.05 1 0 1 0 0 0 0
......................................................................................................................................................................GTCGAGGGTTGTCGTTAGGTTAAT............................................................. 24 0 20 0.05 1 1 0 0 0 0 0
........................TTATCCGCGCAAAACAACCGGCTAGGAG....................................................................................................................................................................................................... 28 2 20 0.05 1 0 1 0 0 0 0
........................................................................................................................................CCACCGTCAACGCTTGGT................................................................................................. 18 1 20 0.05 1 0 1 0 0 0 0
........................................................................CGACCTCGACACGCGCTTACTCGT........................................................................................................................................................... 24 1 20 0.05 1 0 1 0 0 0 0
.................................................................................................................................................................CACCGGTCGAGGGTTGTCGTTAGGTT................................................................ 26 0 20 0.05 1 0 1 0 0 0 0
.....................................................................................................GGCGTTTTATCGTCGGCCGCAGT............................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0
..........................................................................................................................................................................AGGGTTGTCGTTAGGTTAATACACAG....................................................... 26 0 20 0.05 1 0 0 0 1 0 0
.......................................................................................................................................................................TCGAGGGTTGTCGTTAGGTTAATA............................................................ 24 0 20 0.05 1 1 0 0 0 0 0
...........................................................................CCTAGACACGCGCTTACTCCTCACT....................................................................................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0
......................................................................................................................................GGCCACCGTCAACGCTTGCTGTAGCTG.......................................................................................... 27 1 20 0.05 1 1 0 0 0 0 0
......................................................................................................................................TGCCACCGTCAACGCTTGCTGTTGCT........................................................................................... 26 2 20 0.05 1 0 1 0 0 0 0
...........................................................................................................................................................................GGGTTGTCGTTAGGTTAATACACACAC..................................................... 27 1 20 0.05 1 0 1 0 0 0 0
.....................................................................................................................................TGGCCACCGTCAACGCTGGCTGTAGCT........................................................................................... 27 1 20 0.05 1 0 1 0 0 0 0
........................................................................................................................................GCACCGTCAACGCTTGCTGTAGCT........................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0
...........................................................................CCTCGACACGCGCTTACTCGTTACT....................................................................................................................................................... 25 2 20 0.05 1 0 1 0 0 0 0
.......................................................................................CTTACTCCTCACTCGGCGTTTTATCG.......................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0
............................................................................................................................................................AGCTACACCGGTCGAGGGTTG.......................................................................... 21 0 20 0.05 1 0 0 1 0 0 0
..............................................................................TGACACGCGCTTACTCCTCACT....................................................................................................................................................... 22 1 20 0.05 1 0 0 1 0 0 0
.........................................................................GACCTCGACACGCGCGTACTCCTCACT....................................................................................................................................................... 27 1 20 0.05 1 1 0 0 0 0 0
....................................................................GAAACGACCTCGACACGCGCTTACTCCTC.......................................................................................................................................................... 29 0 20 0.05 1 1 0 0 0 0 0
...............................................................................................................................................................................TGTCGTTAGGTTAATACACAGTCGT................................................... 25 1 20 0.05 1 0 1 0 0 0 0
......................................................................................GCTTACTCCTCACTCGGCGTTTTATCGT......................................................................................................................................... 28 0 20 0.05 1 1 0 0 0 0 0
..................................................................................................................................................................................CGTTAGGTTAATACACAGTCGT................................................... 22 1 20 0.05 1 0 1 0 0 0 0
.................................................................GCTGAAACGACCTCGACACGCGCT.................................................................................................................................................................. 24 0 20 0.05 1 0 0 0 1 0 0
................................................................................................................................................................................GTCGTTAGGTTAATACACAGAC..................................................... 22 0 20 0.05 1 1 0 0 0 0 0
..........................................................................ACCTAGACACGCGCTTACTCCTCACT....................................................................................................................................................... 26 1 20 0.05 1 0 1 0 0 0 0
.................................................................................................................................................................................TCGTTAGGTTAATACACTGAC..................................................... 21 1 20 0.05 1 0 1 0 0 0 0
......................................................................................................................................GGCCACCGTCAACGCTTGCTGTAGCG........................................................................................... 26 1 20 0.05 1 0 1 0 0 0 0
.......................................................................................................................................................................................................................................CCTCTCGTCCCTGCTCGG.. 18 2 20 0.05 1 0 1 0 0 0 0
............................CCGCGCAAAACAACCGGCTACGAG....................................................................................................................................................................................................... 24 1 20 0.05 1 0 1 0 0 0 0
...........................................................................................................................................CCGTCAACGCTTGCTGTAGCTACACCGGT................................................................................... 29 0 20 0.05 1 1 0 0 0 0 0
.............................................................................................................................................GTCAACGCTTGCTGTAGCTACACCGGT................................................................................... 27 0 20 0.05 1 0 1 0 0 0 0
........................................................................CGACCTCGACACGCGCTTACTCTT........................................................................................................................................................... 24 1 20 0.05 1 1 0 0 0 0 0
..........................................................................................ACTCCTCACTCGGCGTTTTATCG.......................................................................................................................................... 23 0 20 0.05 1 1 0 0 0 0 0
........................................................................................................................................CCACCGTCAACGCTTGCTGTAGCTA.......................................................................................... 25 0 20 0.05 1 1 0 0 0 0 0
.............................CGCGCAAAACAACCGGCTAGGA........................................................................................................................................................................................................ 22 0 20 0.05 1 1 0 0 0 0 0
.......................................................................................................................................GCCACCGTCAACGCTTGCTGGAGCT........................................................................................... 25 1 20 0.05 1 1 0 0 0 0 0
......................................................................................................................................................................GTCGAGGGTTGTCGTTAGGTTA............................................................... 22 0 20 0.05 1 1 0 0 0 0 0
..GTAGGCCAACAGGCACGACTCTGCAT............................................................................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0 0
......................................................................................................................................AGCCACCGTCAACGCTTGCTGTAGC............................................................................................ 25 1 20 0.05 1 1 0 0 0 0 0
..........................................................................ACCTCGACACGCGCTTACTC............................................................................................................................................................. 20 0 20 0.05 1 0 0 0 0 0 1
...........................................................................CCTAGACACGCGCTTACTCCTCACTCC..................................................................................................................................................... 27 2 20 0.05 1 0 1 0 0 0 0
..............................................................................................................................................TCAACGCTTGCTGTAGCTACACCGGT................................................................................... 26 0 20 0.05 1 0 0 1 0 0 0
..................................................................................................CTCGGCGTTTTATCGTCGGCCGCAGTT.............................................................................................................................. 27 0 20 0.05 1 1 0 0 0 0 0
.................................................................................................................................................................................TCGTTAGGTTAATACACAGACGT................................................... 23 0 20 0.05 1 1 0 0 0 0 0
....................................................................................................................................TTGGCCACCGTCAACGCTTGCTGTAGCT........................................................................................... 28 1 20 0.05 1 0 1 0 0 0 0
......................................................................................................................................GGCCACCGTCAGCGCTTGCTGTAGCT........................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0
.........................CATCCGCGGAAAACAACCGGCTAGGAG....................................................................................................................................................................................................... 27 1 20 0.05 1 0 1 0 0 0 0
.....................................................................................................................................TTGCCACCGTCAACGCTTGCTGTAGCT........................................................................................... 27 1 20 0.05 1 0 1 0 0 0 0
......................................................................................................................................GGCCACCGTCAACGCTTGCCGTAGCT........................................................................................... 26 1 20 0.05 1 1 0 0 0 0 0
......................................................................................................................................GGCCACCGTCAACGCTTGCGGTAGCT........................................................................................... 26 1 20 0.05 1 0 0 1 0 0 0
.........................................................................GACCTCAACACGCGCTTACTCCTCACT....................................................................................................................................................... 27 1 20 0.05 1 0 1 0 0 0 0
........................TCATCCGCGCAAAACAACCGGCTAGGAG....................................................................................................................................................................................................... 28 1 20 0.05 1 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6541:1340259-1340509 - dmo_2216 TCCATCCGGTTGTCCGTGCTGAGACGTAGGCGCGTTTTGTTGGCCGATCCTCGCGCACTGGCCAGCGACTTTGCTGGAGCTGTGCGCGAATGAGGAGTGAGCCGCAAAATAGCAGCCGGCGTCAAAGCTCGACACCGGTGGCAGTTGCGAACGACATCGATGTGGCCAGCTCCCAACAGCAATCCAATTATGTGTCTGCAGCAGCGCCACCACGGAGTTCCAGCCGCAAACGGAGATCAGCGACGAGCCTT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
TCCATCCGGTTGTCCGTGCTGAGACGTAGGCGCGTTTTGTTGGCCGATCCTCGCGCACTGGCCAGCGACTTTGCTGGAGCTGTGCGCGAATGAGGAGTGAGCCGCAAAATAGCAGCCGGCGTCAAAGCTCGACACCGGTGGCAGTTGCGAACGACATCGATGTGGCCAGCTCCCAACAGCAATCCAATTATGTGTCTGCAGCAGCGCCACCACGGAGTTCCAGCCGCAAACGGAGATCAGCGACGAGCCTTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................................................................................................................................................ACGACATCGATGTGGCCAGCTCCC.............................................................................24205.7511511500000
......................................................................................................................................................ACGACATCGATGTGGCCAGCTC...............................................................................22202.10420100401
..................................................................................................................................................................................................................................CAAACGGAGATCAGCGACGAGCCT.24201.452911010134
..................................................................................................................................................................................................................................CAAACGGAGATCAGCGACGAGC...22201.402810000180
............................................................................................................................................................................................TATGTGTCTGCAGCAGCGCCACC........................................2361.006510000
..................................................................................................................................................................................................................................CAAACGGAGATCAGCGACGAGCC..23200.90181800000
......................................................................................................................................................ACGACATCGATGTGGCCAGCTCCCAAC..........................................................................27200.75150000150
......................................................................................................................................................................................TCCAATTATGTGTCTGCAGCAGCGCC...........................................2670.574000040
............................................................................................................................................................................................TATGTGTCTGCAGCAGCGCCA..........................................2160.332100001
...........................................................................................................................................................................................TTATGTGTCTGCAGCAGCGCCACCACAA....................................2840.251100000
..............................................................................................................................................................................................TGTGTCTGCAGCAGCGCCACCACGG....................................2540.251100000
............................................................................................................................................................................................TATGTGTCTGCAGCAGCGCCACCA.......................................2440.251100000
..................................................................................................................................................................................................................................CAAACGGAGATCAGCGACGAGCCTT25200.255400010
......................................................................................................................................................ACGACATCGATGTGGCCAGCTCCCAACA.........................................................................28200.255500000
TCCATCCGGTTGTCCGTGCTGAGACG.................................................................................................................................................................................................................................26200.204300001
......................................................................................................................................................................................TCCAATTATGTGTCTGCAGCAGCGCCA..........................................2760.171100000
............................................................................................................................................................................................TATGTGTCTGCAGCAGCGCCAC.........................................2260.171010000
..........................................................................................TGAGGAGTGAGCCGCAAAATAG...........................................................................................................................................22200.153300000
........................................................................................................CAAAATAGCAGCCGGCGTCAAAGC...........................................................................................................................24140.142100010
........................................................................................................CAAAATAGCAGCCGGCGTCAAAGCTCGA.......................................................................................................................2870.141100000
........................................................................................................CAAAATAGCAGCCGGCGTCAAAGCTCG........................................................................................................................2770.141100000
............................................................................................................................................................................................TATGTGTCTGCAGCAGCGCC...........................................2070.141100000
.....................................................................................................................GGCGTCAAAGCTCGACACCGG.................................................................................................................2180.131100000
..........................................................................................TGAGGAGTGAGCCGCAAAATAGCAA........................................................................................................................................25200.102200000
....................................TTGTTGGCCGATCCTCGCGCACTGG..............................................................................................................................................................................................25200.102200000
.............................................................................................................................AGCTCGACACCGGTGGCAGTT.........................................................................................................21110.091100000
............................................................................................................................................GCAGTTGCGAACGACATCGATGTG.......................................................................................24200.051100000
.........TTGTCCGTGCTGAGACGTAGGCGCGTTT......................................................................................................................................................................................................................28200.051000010
........................................................................GCTGGAGCTGTGCGCGAATGAGGA...........................................................................................................................................................24200.051100000
..........................................................................................TGAGGAGTGAGCCGCAAAAT.............................................................................................................................................20200.051100000
......................................................................................................................................................ACGACATCGATGTGGCCAG..................................................................................19200.051000010
.......................................................................TGCTGGAGCTGTGCGCGAA.................................................................................................................................................................19200.051100000
......................................................................................................................................................ACGACATCGATGTGGCCAGCTCCCC............................................................................25200.051000010
.............................................................................................GGAGTGAGCCGCAAAATAGCAGC.......................................................................................................................................23200.051100000
..........................................................................................TGAGGAGTGAGCCGCAAAATAGCAGCCGG....................................................................................................................................29200.051000001
.......................................................................................................GCAAAATAGCAGCCGGCGTC................................................................................................................................20200.051000010
.................................................................................................................................................................................AGCAATCCAATTATGTGTCTGCA...................................................23200.051100000
........................................................................GCTGGAGCTGTGCGCGAATGAGG............................................................................................................................................................23200.051100000
..........................................GCCGATCCTCGCGCACTGGCCAA..........................................................................................................................................................................................23200.051100000
...................................................................................................................................................................................................................................AAACGGAGATCAGCGACGAGCCT.23200.051100000
...................................................................................................................................................................................CAATCCAATTATGTGTCTGCA...................................................21200.051100000
..............................CGCGTTTTGTTGGCCGATCCT........................................................................................................................................................................................................21200.051100000
.................................................................................................................................CGACACCGGTGGCAGTTGCGA.....................................................................................................21200.051100000
..................................................................................................................................................................................................................................CAAACGGAGATCAGCGACGAG....21200.051100000
..............CGTGCTGAGACGTAGGCGCGTTTTG....................................................................................................................................................................................................................25200.051100000
......................................................................................CGAATGAGGAGTGAGCCGCAAA...............................................................................................................................................22200.051100000

Generated: 05/18/2015 at 02:12 AM