ID:

dmo_2205

 Coordinate:

scaffold_6541:692341-692491 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.7 -13.5 -13.4

Flybase annnotation

CDS [Dmoj\GI14182-cds]; exon [dmoj_GLEANR_14401:2]; intron [Dmoj\GI14182-in]

Repeatable elements

NameClassFamilyStrand
Homo6DNAhAT-Pegasus+
mature
star
  1. scaffold_37:944-968 +
  2. scaffold_1805:1183-1207 +
  3. scaffold_2490:1585-1609 +
  4. scaffold_5557:3328-3352 +
  5. scaffold_6071:78070-78094 +
  6. scaffold_6473:7921970-7921994 +
  7. scaffold_6473:16440738-16440762 +
  8. scaffold_6482:1127986-1128010 +
  9. scaffold_6496:24362494-24362518 +
  10. scaffold_6498:645580-645604 +
  11. scaffold_6500:4030631-4030655 +
  12. scaffold_6500:7489683-7489707 +
  13. scaffold_6500:13699582-13699606 +
  14. scaffold_6500:16682310-16682334 +
  15. scaffold_6500:19783300-19783324 +
  16. scaffold_6500:26906334-26906358 +
  17. scaffold_6540:13493550-13493574 +
  18. scaffold_6540:14918148-14918172 +
  19. scaffold_6541:3657-3681 +
  20. scaffold_6680:1953481-1953505 +
  21. scaffold_3247:126-150 -
  22. scaffold_3828:1848-1872 -
  23. scaffold_6482:1467097-1467121 -
  24. scaffold_6482:1763077-1763101 -
  25. scaffold_6496:26286470-26286494 -
  26. scaffold_6496:26569397-26569421 -
  27. scaffold_6498:420118-420142 -
  28. scaffold_6498:530301-530325 -
  29. scaffold_6500:22124261-22124285 -
  30. scaffold_6500:29996604-29996628 -
  31. scaffold_6540:710528-710552 -
  32. scaffold_6540:711652-711676 -
  33. scaffold_6540:1370309-1370333 -
  34. scaffold_6540:13991109-13991133 -
  35. scaffold_6540:15199243-15199267 -
  36. scaffold_6540:21000920-21000944 -
  37. dmo_2205  scaffold_6541:692359-692383 -
  38. scaffold_6541:1951539-1951563 -
  39. scaffold_6680:23823449-23823473 -
  40. scaffold_6680:24288590-24288614 -

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GCACTGCGCTTGGGCTGCGCTGCAATGTAGGCAATATTATGAGAATTTATTTGTTGAATAATTTTTTTTGCAGACATACAATCTTAATAAAACTTTCAGAACATAATCGTAATGTTCGAGTGTGAAATGAGTTTTTACAAATTGGGGTCGAAGAGGGCGTGGTATCCAAAATCTGTAAATTACAAAATCTTAAATCTCTAGGTCTAAAAGTGCAGGTGCAGGTGGAATCGCGAATCAGGCTGGCCGATGGA
*****************************************************************************************.....(((.((((((.......)))))))))(((((((.....)))))))..((((((((......)))......)))))..............******************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 M060
embryo
 V056
head
 V049
head
........................................................................................................................................................................................................................TGAAGGTGGAATCGCTAGT................ 19 3 20 1.90 38 13 22 0 2 1
..............................................................................................................................................................................GTAAATTACAAAATCTTAAATCTCTAGG................................................. 28 0 1 1.00 1 1 0 0 0 0
.CACTGCGCTTGGGCTGCGCTGC.................................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
.........................................................................................AAACTTTCAGAACATAATCGT............................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................................................................................GTGAAGGTGGAATCGCTAGT................ 20 3 6 0.17 1 0 1 0 0 0
.................................................TGTGTTGAATATTTTTGTTTGCA................................................................................................................................................................................... 23 3 6 0.17 1 1 0 0 0 0
...........................................................................................................................................................................................................................AGGTGGAATCGCTAGTAA.............. 18 3 20 0.10 2 2 0 0 0 0
..............................................................................................................................................................GTGGTATCCAAAATCTGTAAATTAC.................................................................... 25 0 20 0.10 2 0 0 2 0 0
..............................................................................................................................................................................................................................AGTAATCGCGAATCCGGCT.......... 19 3 13 0.08 1 0 0 1 0 0
.....................................................................................................................................................................................................................................GCGAATCAGGCTGGCCGATGGA 22 0 20 0.05 1 1 0 0 0 0
.................................................................................................................................................................................................................................AATCGCGAATCAGAATGTC....... 19 3 20 0.05 1 0 0 1 0 0

Anti-sense strand reads

CGTGACGCGAACCCGACGCGACGTTACATCCGTTATAATACTCTTAAATAAACAACTTATTAAAAAAAACGTCTGTATGTTAGAATTATTTTGAAAGTCTTGTATTAGCATTACAAGCTCACACTTTACTCAAAAATGTTTAACCCCAGCTTCTCCCGCACCATAGGTTTTAGACATTTAATGTTTTAGAATTTAGAGATCCAGATTTTCACGTCCACGTCCACCTTAGCGCTTAGTCCGACCGGCTACCT
********************************************************************.....(((.((((((.......)))))))))(((((((.....)))))))..((((((((......)))......)))))..............***************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M060
embryo
 M046
female body
 V041
embryo
...................................................................................................................................................................................................................CGTCCACGTCCACCTTAGCGCTTAGT.............. 26 0 1 3.00 3 2 1 0
...................................................................................................................................................................................................................CGTCCACGTCCACCTTAGCGCTTAGTC............. 27 0 1 2.00 2 2 0 0
.................................................................................................................................................................................................................................TTAGCGCTTAGTCCGACCGGCTACCT 26 0 1 2.00 2 1 1 0
........................................................................................................................................................................................................CCATATTTTCACGTCCACGTCCACCT......................... 26 1 1 1.00 1 1 0 0
...................................................................................................................................................................................................GAGATCCAGATTTTCACGTCCACGT............................... 25 0 1 1.00 1 0 1 0
...............................................................................................................................................................................................................TTCACGTCCACGTCCACCTTAGCGC................... 25 0 1 1.00 1 0 1 0
................CGCGACGTTACATCCGTTATAATACTCT............................................................................................................................................................................................................... 28 0 1 1.00 1 0 1 0
......................................................................................................................................................................................................................CCACGTCCACCTTAGCGCTTAGGC............. 24 1 1 1.00 1 1 0 0
..................................................................................................................................................................................................AGAGATCCAGATTTTCACGTCCACGT............................... 26 0 1 1.00 1 0 1 0
......................................................................................................................................................................................................................CCACGTCCACCTTAGCGCTTAGTCC............ 25 0 1 1.00 1 1 0 0
..................CGACGTTACATCCGTTATAATACTCT............................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0
..............................................................................................................................................ACCCCAGCTTCTCCCGCACCATAGGT................................................................................... 26 0 1 1.00 1 0 1 0
........................................................................................................................................................................................................CCAGATTTTCACGTCCACGTCCACCT......................... 26 0 1 1.00 1 1 0 0
......................................................................................................................................................................................................................CCACGTCCACCTTAGCGCTTAGTCCG........... 26 0 1 1.00 1 1 0 0
....................ACGTTACATCCGTTATAATACTCTTA............................................................................................................................................................................................................. 26 0 1 1.00 1 0 1 0
.................GCGACGTTACATCCGATATAATACTCT............................................................................................................................................................................................................... 27 1 2 0.50 1 1 0 0
.............................................................................................................................................................GCACCATAGGTTTTAGACATTTAATGT................................................................... 27 0 20 0.35 7 0 7 0
..............GACGCGACGTTACATCCGTTATAATAC.................................................................................................................................................................................................................. 27 0 3 0.33 1 0 1 0
..........................................................................................................................................................CCCGCACCATAGGTTTTAGACATT......................................................................... 24 0 20 0.30 6 6 0 0
..............................................................AAAAAAATGTCTGAATTTTAGA....................................................................................................................................................................... 22 3 9 0.11 1 1 0 0
..........................................................................GTATGTTAGAATTATTTTGAAAGT......................................................................................................................................................... 24 0 10 0.10 1 0 1 0
..............................................................................................................................................................CACCATAGGTTTTAGACATTTAAT..................................................................... 24 0 20 0.10 2 0 2 0
................................................................................................................ACAACCTCACACTTTGCTCT....................................................................................................................... 20 3 16 0.06 1 1 0 0
....................................................................................................................................................CCTTCTCCCGCACCATAGGTTTTAGACA........................................................................... 28 1 19 0.05 1 1 0 0
...........................................................................................................................................................CCGCACCATAGGTTTTAGACATTT........................................................................ 24 0 20 0.05 1 0 0 1
....................................................................................................................................................................................................................................GCGCTTAGTCCGACCGGCTACCT 23 0 20 0.05 1 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6541:692291-692541 - dmo_2205 GCACTGCGCTTGGGCTGCGCTGCAATGTAGGCAATATTATGAGAATTTATTTGTTGAATAATTTTTTTTGCAGACATACAATCTTAATAAAACTTTCAGAACATAATCGTAATGTTCG--AGTGTG------AAATGAGTTTTTACAAATTGGG------------------GTCGAAGAGGGCG--TGGTATCCAAAATCTGTAAATTACAAAATCTTAAATCTCTAGGTCTAAAAG---------------------TGCAGGTGCAGGTGGAATCGCGAA--------------------TCAGGCTGGCCGATGGA-
droVir3 scaffold_12928:6264882-6265090 + TCTTTTTGCTTCTATTGATTTCTATTGTGGCATG---TATGGAAATGCAT-TCTTGATTAACTTCGGTGCTTGTAGTCCGATTTTTATGAAACTTTTAGGGAACAAATGTCGCATACAAAAGTGTGTATATACTAAGTATGTTTACTATTCAATTTTGGCGAAAATGGGGGAGCAAAAGAGCGAGTGAAGTATTCTTAATCTTT-------------------------------------------------------------------------------------------------------ATATTATA----A-
droWil2 scf2_1100000004521:3312600-3312646 - ATT-----------------------------------ACAAAAATTTAGCAATTAAAGAAATTTTTTTGCAGAAGTGAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-
dp5 Unknown_singleton_887:59172-59202 + GG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG------------CGAACGACGA--------------------TCAGATTGGCGGATGGG-
droPer2 scaffold_2:167280-167310 + GG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA------------CGAACGACGA--------------------TCAGATTGGCGGATGGG-
droAna3 scaffold_13499:1279467-1279488 - CG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG--------------------TAAAGTTGGCCAATGGGA
droBip1 scf7180000393210:11706-11725 - GG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G--------------------TGAAGTTGGCCAATGGA-
droKik1 scf7180000302493:3287-3377 - CCGAAGCGCGTTAAGTATG------------------AATAGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCAAGACCTCAGAAAGCAGGACAGGTGGAGCGGAGCC------------CGGGCCGAAA--------------------TCGTGATGGCTGACGGA-
droFic1 scf7180000453173:4819-4869 - AG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG------------CAGGTGAGGTTCGGGATGTCGTCACTAGAATAGCGTTGGCCGATCGG-
droEle1 scf7180000490696:26521-26600 - GCA-AGAG-----------------------------TATAAAAAGTTACATTTTTAAAAATTTTTTTTATATTTTTATTGTTTTTATGGGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTATGTTATAGTCGT-
droRho1 scf7180000766545:5070-5111 + TGCCCGCGC---------------------------------------------------------------------------------------------------------------------------------------------------------AGAC---------------------------------------------------------------------------------------------GA------------GGAACTAGAA--------------------TAGCGTTGTCCGATCGT-
droTak1 scf7180000411235:1757-1788 - AAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG------------CGAACGCGAA--------------------TTTCTCTTGCGGATGGG-
droEug1 scf7180000405383:9094-9112 + AG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAAGTTAGCCGACGGA-
droYak3 v2_chrUn_4206:12311-12324 + GG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGCTGATGGA-
droEre2 scaffold_3407:19509-19522 + GG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGCGGATGGA-

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
GCACTGCGCTTGGGCTGCGCTGCAATGTAGGCAATATTATGAGAATTTATTTGTTGAATAATTTTTTTTGCAGACATACAATCTTAATAAAACTTTCAGAACATAATCGTAATGTTCG--AGTGTG------AAATGAGTTTTTACAAATTGGG------------------GTCGAAGAGGGCG--TGGTATCCAAAATCTGTAAATTACAAAATCTTAAATCTCTAGGTCTAAAAG---------------------TGCAGGTGCAGGTGGAATCGCGAA--------------------TCAGGCTGGCCGATGGA-SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................................................................................................................................................................GTAAATTACAAAATCTTAAATCTCTAGG...........................................................................................2811.001100000
.CACTGCGCTTGGGCTGCGCTGC..........................................................................................................................................................................................................................................................................................................2211.001100000
.........................................................................................AAACTTTCAGAACATAATCGT...................................................................................................................................................................................................................2111.001100000
........................................................................................................................................................................................G--TGGTATCCAAAATCTGTAAATTAC..............................................................................................................25200.102000020
......................................................................................................................................................................................................................................................................................GCGAA--------------------TCAGGCTGGCCGATGGA-22200.051100000
droVir3
TCTTTTTGCTTCTATTGATTTCTATTGTGGCATG---TATGGAAATGCAT-TCTTGATTAACTTCGGTGCTTGTAGTCCGATTTTTATGAAACTTTTAGGGAACAAATGTCGCATACAAAAGTGTGTATATACTAAGTATGTTTACTATTCAATTTTGGCGAAAATGGGGGAGCAAAAGAGCGAGTGAAGTATTCTTAATCTTT-------------------------------------------------------------------------------------------------------ATATTATA----A-SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droWil2
ATT-----------------------------------ACAAAAATTTAGCAATTAAAGAAATTTTTTTGCAGAAGTGAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
dp5
GG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG------------CGAACGACGA--------------------TCAGATTGGCGGATGGG-SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................................................................................................................................................................................................................................................................CGAACGACGA--------------------TCAGATTGGCGGA.....231627.00432130230210102210
.................................................................................................................................................................................................................................................................................CGAACGACGA--------------------TCAGATTGGCGG......221626.634260388403012460
.................................................................................................................................................................................................................................................................................CGAACGACGA--------------------TCAGATTGGCGGAT....241616.562650213301014610
...................................................................................................................................................................................................................................................................TG------------CGAACGACGA--------------------TCAGATTGGCGGA.....2518.0080500000300
.................................................................................................................................................................................................................................................................................CGAACGACGA--------------------TCAGATTGGCG.......21177.941350107306011440
.................................................................................................................................................................................................................................................................................CGAACGACGA--------------------TCAGATTGGC........20177.241230694080128130
.................................................................................................................................................................................................................................................................................CGAACGACGA--------------------TCAGATTGGCGGATGG..26165.448708210000400
.................................................................................................................................................................................................................................................................................CGAACGACGA--------------------TCAGATTGGCGGATG...25164.637406500000810
....................................................................................................................................................................................................................................................................G------------CGAACGACGA--------------------TCAGATTGGCGG......2314.0040200000200
...................................................................................................................................................................................................................................................................TG------------CGAACGACGA--------------------TCAGATTGGCG.......2312.0020200000000
..................................................................................................................................................................................................................................................................................GAACGACGA--------------------TCAGATTGGCGG......21161.752802600000200
..................................................................................................................................................................................................................................................................................GAACGACGA--------------------TCAGATTGGCGGA.....22161.312102100000000
.................................................................................................................................................................................................................................................................................CGAACGACGA--------------------TCAGATTGG.........19171.121901900000000
...................................................................................................................................................................................................................................................................TG------------CGAACGACGA--------------------TCAGATTGGC........2211.0010000000010
....................................................................................................................................................................................................................................................................G------------CGAACGACGA--------------------TCAGATTGGCGGA.....2411.0010100000000
....................................................................................................................................................................................................................................................................G------------CGAACGACGA--------------------TCAGATTGGCG.......2211.0010100000000
GG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG------------CGAACGACGA--------------------TCAGATTGG.........2311.0010100000000
...................................................................................................................................................................................................................................................................TG------------CGAACGACGA--------------------TCAGATTGG.........2111.0010100000000
....................................................................................................................................................................................................................................................................G------------CGAACGACGA--------------------TCAGATTGGC........2111.0010010000000
...................................................................................................................................................................................................................................................................TG------------CGAACGACGA--------------------TCAGATTGGCGGAT....2611.0010100000000
...................................................................................................................................................................................................................................................................TG------------CGAACGACGA--------------------TCAGATTGGCGG......2411.0010100000000
...................................................................................................................................................................................................................................................................TG------------CGAACGACGA--------------------TCAGATTGGCGGATG...2711.0010100000000
..................................................................................................................................................................................................................................................................................GAACGACGA--------------------TCAGATTGGCG.......20170.761301300000000
..................................................................................................................................................................................................................................................................................GAACGACGA--------------------TCAGATTGGCGGATGG..25160.5690900000000
.................................................................................................................................................................................................................................................................................CGAACGACGA--------------------TCAGATTGGCGGATGGG-27160.5690800000100
..................................................................................................................................................................................................................................................................................GAACGACGA--------------------TCAGATTGGCGGAT....23160.5690900000000
..................................................................................................................................................................................................................................................................................GAACGACGA--------------------TCAGATTGGCGGATG...24160.4470700000000
.................................................................................................................................................................................................................................................................................CGAACGACGA--------------------TCAGATTGGCGGAC....24160.4470430000000
.................................................................................................................................................................................................................................................................................CGAACGACGA--------------------TCAGATTGGCGGATA...25160.3860600000000
...................................................................................................................................................................................................................................................................................AACGACGA--------------------TCAGATTGGCGGATGG..24160.3150500000000
......................................................................................................................................................................................................................................................................................GACGA--------------------TCAGATTGGCGGATGG..21160.3150400000100
.................................................................................................................................................................................................................................................................................CGAACGACGA--------------------TCAGATTGGCGGAA....24160.2540300000100
.................................................................................................................................................................................................................................................................................CGAACGACGA--------------------TCAGATTGGCGT......22170.2440400000000
.................................................................................................................................................................................................................................................................................CGAACGACGA--------------------TCAGATTGGCGGG.....23160.1930200000100
..................................................................................................................................................................................................................................................................................GAACGACGA--------------------TCAGATTGG.........18170.1830300000000
.......................................................................................................................................................................................................................................................................................ACGA--------------------TCAGATTGGCGGATGG..20160.1320200000000
.................................................................................................................................................................................................................................................................................CGAACGACGA--------------------TCAGATTGGCGGAG....24160.1320100000100
..................................................................................................................................................................................................................................................................................GAACGACGA--------------------TCAGATTGGC........19170.1220200000000
.................................................................................................................................................................................................................................................................................CGAACGACGA--------------------TCAGATTGGCGGAAAA..26160.0610100000000
.................................................................................................................................................................................................................................................................................CGAACGACGA--------------------TCAGATTGGCGGATGT..26160.0610100000000
.................................................................................................................................................................................................................................................................................CGAACGACGA--------------------TCAGATTGGCGGAAA...25160.0610100000000
.................................................................................................................................................................................................................................................................................CGAACGACGA--------------------TCAGATTGGCGGATAC..26160.0610100000000
..................................................................................................................................................................................................................................................................................GAACGACGA--------------------TCAGATTGGCGGATA...24160.0610100000000
.................................................................................................................................................................................................................................................................................CGAACGACGA--------------------TCAGATTGGCGGACAA..26160.0610100000000
..................................................................................................................................................................................................................................................................................GAACGACGA--------------------TCAGATTGGCGGAA....23160.0610100000000
....................................................................................................................................................................................................................................................................................ACGACGA--------------------TCAGATTGGCGGATGT..23160.0610100000000
.................................................................................................................................................................................................................................................................................CGAACGACGA--------------------TCAGATTGGCGGATGGT-27160.0610100000000
.................................................................................................................................................................................................................................................................................CGAACGACGA--------------------TCAGATTGGCGGATGGA-27160.0610100000000
..................................................................................................................................................................................................................................................................................GAACGACGA--------------------TCAGATTGGCGGAAA...24160.0610100000000
...................................................................................................................................................................................................................................................................................AACGACGA--------------------TCAGATTGGCGGA.....21160.0610100000000
....................................................................................................................................................................................................................................................................................ACGACGA--------------------TCAGATTGGCGGAT....21160.0610100000000
.................................................................................................................................................................................................................................................................................CGAACGACGA--------------------TCAGATTGGCGGATC...25160.0610100000000
..................................................................................................................................................................................................................................................................................GAACGACGA--------------------TCAGATTGGCGGT.....22160.0610100000000
.................................................................................................................................................................................................................................................................................CGAACGACGA--------------------TCAGATTGGCGGATAA..26160.0610100000000
.................................................................................................................................................................................................................................................................................CGAACGACGA--------------------TCAGATTGGCGGT.....23160.0610000000010
......................................................................................................................................................................................................................................................................................GACGA--------------------TCAGATTGGCGGA.....18160.0610100000000
...................................................................................................................................................................................................................................................................................AACGACGA--------------------TCAGATTGGCGGATGA..24160.0610100000000
.................................................................................................................................................................................................................................................................................CGAACGACGA--------------------TCAGATTGGCGGATGA..26160.0610100000000
.................................................................................................................................................................................................................................................................................CGAACGACGA--------------------TCAGATTGGCA.......21170.0610100000000
.................................................................................................................................................................................................................................................................................CGAACGACGA--------------------TCAGATTG..........18170.0610100000000
.................................................................................................................................................................................................................................................................................CGAACGACGA--------------------TCAGATTGGTAT......22170.0610100000000
droPer2
GG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA------------CGAACGACGA--------------------TCAGATTGGCGGATGGG-SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................................................................................................................................................................................................................................................................................CGAACGACGA--------------------TCAGATTGGCGG......22131.23160160000
.................................................................................................................................................................................................................................................................................CGAACGACGA--------------------TCAGATTGGCGGAT....24130.92120120000
.................................................................................................................................................................................................................................................................................CGAACGACGA--------------------TCAGATTGGCGGA.....23130.699261000
.................................................................................................................................................................................................................................................................................CGAACGACGA--------------------TCAGATTGGCGGATGG..26130.547060001
.................................................................................................................................................................................................................................................................................CGAACGACGA--------------------TCAGATTGGCGGATG...25130.466060000
.................................................................................................................................................................................................................................................................................CGAACGACGA--------------------TCAGATTGGCG.......21130.233030000
.................................................................................................................................................................................................................................................................................CGAACGACGA--------------------TCAGATTGGC........20130.152200000
..................................................................................................................................................................................................................................................................................GAACGACGA--------------------TCAGATTGGCGGAT....23130.152020000
.................................................................................................................................................................................................................................................................................CGAACGACGA--------------------TCAGATTGGCGGATGA..26130.081010000
.................................................................................................................................................................................................................................................................................CGAACGACGA--------------------TCAGATTGGCGGATGGG-27130.081010000
.................................................................................................................................................................................................................................................................................CGAACGACGA--------------------TCAGATTGG.........19130.081010000
droAna3
CG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG--------------------TAAAGTTGGCCAATGGGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
GG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G--------------------TGAAGTTGGCCAATGGA-SizeHit CountTotal NormTotal
No Reads
droKik1
CCGAAGCGCGTTAAGTATG------------------AATAGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCAAGACCTCAGAAAGCAGGACAGGTGGAGCGGAGCC------------CGGGCCGAAA--------------------TCGTGATGGCTGACGGA-SizeHit CountTotal NormTotal
No Reads
droFic1
AG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG------------CAGGTGAGGTTCGGGATGTCGTCACTAGAATAGCGTTGGCCGATCGG-SizeHit CountTotal NormTotal
No Reads
droEle1
GCA-AGAG-----------------------------TATAAAAAGTTACATTTTTAAAAATTTTTTTTATATTTTTATTGTTTTTATGGGTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTATGTTATAGTCGT-SizeHit CountTotal NormTotal
No Reads
droRho1
TGCCCGCGC---------------------------------------------------------------------------------------------------------------------------------------------------------AGAC---------------------------------------------------------------------------------------------GA------------GGAACTAGAA--------------------TAGCGTTGTCCGATCGT-SizeHit CountTotal NormTotal
No Reads
droTak1
AAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TG------------CGAACGCGAA--------------------TTTCTCTTGCGGATGGG-SizeHit CountTotal NormTotal
No Reads
droEug1
AG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAAGTTAGCCGACGGA-SizeHit CountTotal NormTotal
No Reads
droYak3
GG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGCTGATGGA-SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
GG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGGCGGATGGA-SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
No Reads

Generated: 05/18/2015 at 02:09 AM