ID:

dmo_2200

 Coordinate:

scaffold_6541:558653-558803 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-23.7 -23.4 -23.4

Flybase annnotation

exon [dmoj_GLEANR_14407:4]; CDS [Dmoj\GI14184-cds]; intron [Dmoj\GI14184-in]

No Repeatable elements found

mature
star
  1. dmo_2200  scaffold_6541:558692-558715 -
  2. scaffold_6541:1714938-1714961 -

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CTTTTCTGCTAAAAAGCGAATCGAGCAAGCAGAAAGCAGACAAAGAAGAAAGAGTTCATGCAGAGACGTCGAAGAAGTCGGTCGAGGTCAAATTTTGCTGATACGCAGGCGGATGAGCTGGTGCGTAAAGAAACAAAGTTAATCAAGAACGCAAGCAAGGTGGCTGTGCGCTACGATTAACTACACTAACTTGTCGGTGAGATTCGTCGTGGGACGTAGTCGATCGAGAGCGCAAGCCAGGTGGCTGTGCG
****************************************************.((((.((....(((.((((.........)))).))).(((((((((..(((((((((......)))..)))))).))...)))))))...)).))))............***************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 V041
embryo
 M060
embryo
....................................................AGTTCATGCAGAGACGTCGAAGA................................................................................................................................................................................ 23 0 1 4.00 4 3 0 1 0
..........................................................................................................................................TTAATCAAGAACGCAAGCAAGGTG......................................................................................... 24 0 2 1.50 3 3 0 0 0
...........................................................................................................................................................................TACGATTAACTACACTAACTTGTCGGT..................................................... 27 0 1 1.00 1 1 0 0 0
....................................................AGTTCATGCAGAGACGTCGAAGAAGT............................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0
..........................................................................................................................................TTAATCAAGAACGCAAGCAAGGT.......................................................................................... 23 0 2 1.00 2 2 0 0 0
....................................................................................................................................................................TGTGCGCTACGATTAACTACACTAACTTG.......................................................... 29 0 1 1.00 1 1 0 0 0
............................GCAGAAAGCAGACAAAGAAGAAAGAGT.................................................................................................................................................................................................... 27 0 1 1.00 1 0 1 0 0
..........................................................................................................................................TTAATCAAGAACGCAAGCAAGGTGG........................................................................................ 25 0 2 1.00 2 2 0 0 0
........................................CAAAGAAGAAAGAGTTCATGCAG............................................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0
....................................................................................................................................ACAAAGTTAATCAAGAACGCAAG................................................................................................ 23 0 1 1.00 1 1 0 0 0
..TTTCTGCTAAAAAGCGAATCGAGCAA............................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0
....................................................AGTTCATGCAGAGACGTCGAAGAAG.............................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0
..........................................................................................................................................TTAATCAAGAACGCAAGCAAGGTGGCTG..................................................................................... 28 0 2 0.50 1 1 0 0 0
..........................................................................................................................................TTAATCAAGAACGCAAGCAAGGTGGC....................................................................................... 26 0 2 0.50 1 1 0 0 0
............................................................................................................................................AATCAAGAACGAAAGCAGG............................................................................................ 19 2 3 0.33 1 1 0 0 0
..........................................................................................................AGGCGGATGAGCTGGTGCGTAAA.......................................................................................................................... 23 0 5 0.20 1 1 0 0 0
.............................................................................................TTTGCTGATACGCAGGCGGATGAGCTGG.................................................................................................................................. 28 0 6 0.17 1 1 0 0 0
...........................................................................................ATTTTGCTGATACGCAGGCGG........................................................................................................................................... 21 0 6 0.17 1 1 0 0 0
..................................................................................................TGATACGCAGGCGGATGAGC..................................................................................................................................... 20 0 6 0.17 1 0 0 0 1
.........................................................................................................................................GTTAATCAAGAACGAAAGT............................................................................................... 19 2 7 0.14 1 0 1 0 0
............................................................................................................................................AATCAAGAACGAAAGTAGGG........................................................................................... 20 3 9 0.11 1 0 1 0 0
...................................................................................................................................................................................................GTTGGCATTCGTCGTGGGA..................................... 19 3 20 0.10 2 0 2 0 0
............ATAGCGAATCGAGCAGGC............................................................................................................................................................................................................................. 18 2 10 0.10 1 1 0 0 0
............................................................................................................................................AATCAAGAACGCAAGTTAGA........................................................................................... 20 3 15 0.07 1 0 1 0 0
..........................................AAGAAGACTGAGTTCTTGC.............................................................................................................................................................................................. 19 3 18 0.06 1 0 0 0 1
.........................................................................................................................................................................................CTAACTTGTCGGCGGTATT............................................... 19 3 20 0.05 1 0 1 0 0
.........................................................................................................................................................GGCAAGGAGGCTGTGAGCT............................................................................... 19 3 20 0.05 1 0 1 0 0

Anti-sense strand reads

GAAAAGACGATTTTTCGCTTAGCTCGTTCGTCTTTCGTCTGTTTCTTCTTTCTCAAGTACGTCTCTGCAGCTTCTTCAGCCAGCTCCAGTTTAAAACGACTATGCGTCCGCCTACTCGACCACGCATTTCTTTGTTTCAATTAGTTCTTGCGTTCGTTCCACCGACACGCGATGCTAATTGATGTGATTGAACAGCCACTCTAAGCAGCACCCTGCATCAGCTAGCTCTCGCGTTCGGTCCACCGACACGC
*****************************************************************************************.((((.((....(((.((((.........)))).))).(((((((((..(((((((((......)))..)))))).))...)))))))...)).))))............**************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V041
embryo
 V110
male body		 V056
head
........................................................................................................................CACGCATTTCTTTGTTTCAATTAGTTCT....................................................................................................... 28 0 1 36.00 36 29 6 1 0 0
...................................CGTCTGTTTCTTCTTTCTCAAGTACGT............................................................................................................................................................................................. 27 0 1 20.00 20 11 9 0 0 0
..........................................................................................................................................................................................................................CAGCTAGCTCTCGCGTTCGGTCCAC........ 25 0 1 15.00 15 8 7 0 0 0
..........................................................................................................................CGCATTTCTTTGTTTCAATTAGTTCT....................................................................................................... 26 0 1 12.00 12 4 8 0 0 0
....................................GTCTGTTTCTTCTTTCTCAAGTACGT............................................................................................................................................................................................. 26 0 1 9.00 9 9 0 0 0 0
.......................................................................................................................CCACGCATTTCTTTGTTTCAATTAGTTCT....................................................................................................... 29 0 1 8.00 8 2 6 0 0 0
........................................................................................................................CACGCATTTCTTTGTTTCAATTAGTT......................................................................................................... 26 0 1 8.00 8 7 1 0 0 0
.........................................................................................................................ACGCATTTCTTTGTTTCAATTAGTTCT....................................................................................................... 27 0 1 8.00 8 7 1 0 0 0
......................................CTGTTTCTTCTTTCTCAAGTACGT............................................................................................................................................................................................. 24 0 1 5.00 5 4 1 0 0 0
.........................................................................................................................................................................................................................TCAGCTAGCTCTCGCGTTCGGTCCAC........ 26 0 1 4.00 4 2 2 0 0 0
...........................................................................................................................................................................................................................AGCTAGCTCTCGCGTTCGGTCCAC........ 24 0 1 4.00 4 2 1 0 1 0
............................................................................................................................................................................................TGAACAGCCACTCTAAGCAGCACCCT..................................... 26 0 1 3.00 3 2 1 0 0 0
...................................CGTCTGTTTCTTCTTTCTCAAGTACTT............................................................................................................................................................................................. 27 1 1 3.00 3 0 3 0 0 0
........................................................................................................................CACGCATTTCTTTGTTTCAATTAGTTC........................................................................................................ 27 0 1 3.00 3 3 0 0 0 0
...........................................................................................................................GCATTTCTTTGTTTCAATTAGTTCT....................................................................................................... 25 0 1 2.00 2 1 0 1 0 0
..............TCGCTTAGCTCGTTCGTCTTTCGT..................................................................................................................................................................................................................... 24 0 1 2.00 2 2 0 0 0 0
.......CGATTTTTCGCTTAGCTCGTTCGTCT.......................................................................................................................................................................................................................... 26 0 1 2.00 2 2 0 0 0 0
..........................................................ACGTCTCTGCAGCTTCTTCAGCCAGCT...................................................................................................................................................................... 27 0 1 2.00 2 2 0 0 0 0
.............................................................................................................................................................................GCTAATTGATGTGATTGAACAGCCACT................................................... 27 0 1 2.00 2 2 0 0 0 0
.....GACGATTTTTCGCTTAGCTCGTTCGT............................................................................................................................................................................................................................ 26 0 1 2.00 2 2 0 0 0 0
...............................CTTTCGTCTGTTTCTTCTTTCTCAAGT................................................................................................................................................................................................. 27 0 1 2.00 2 2 0 0 0 0
..........................................................................................................................................................................................................AAGCAGCACCCTGCATCAGCTAGCTCT...................... 27 0 1 2.00 2 2 0 0 0 0
.........................................................................................................................ACGCATTTCTTTGTTTCAATTAGTT......................................................................................................... 25 0 1 2.00 2 2 0 0 0 0
..................................................................................................................CTCGACCACGCATTTCTTTGTTTCAATTA............................................................................................................ 29 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................CGTTCCACCGACACGCGATGCTAAT........................................................................ 25 0 1 1.00 1 1 0 0 0 0
.....................................................................................CCAGTTTAAAACGACTATGCGTCCGCCT.......................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0
............................................................................................................................................................................TGCTAATTGATGTGATTGAACAGCCACT................................................... 28 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................CGACACGCGATGCTAATTGATGTGATT.............................................................. 27 0 1 1.00 1 1 0 0 0 0
......................................CTGTTTCTTCTTTCTCAAGTACGTCT........................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................CGCATTTCTTTGTTTCAATTAGTT......................................................................................................... 24 0 1 1.00 1 0 1 0 0 0
........................................................................................................................................................................................................CTAAGCAGCACCCTGCATCAGCTAGC......................... 26 0 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................................................................ATCAGCTAGCTCTCGCGTTCGGTCCAC........ 27 0 1 1.00 1 0 1 0 0 0
...............................................................................CCAGCTCCAGTTTAAAACGACTATGCG................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0
........................CGTTCGTCTTTCGTCTGTTTCTTCTTT........................................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................................................................CAGCTAGCTCTCGCGTTCGGTCCGC........ 25 1 1 1.00 1 0 1 0 0 0
....................................GTCTGTTTCTTCTTTCTCAAGTACTT............................................................................................................................................................................................. 26 1 1 1.00 1 0 1 0 0 0
...........TTTTCGCTTAGCTCGTTCGTCTTTCGT..................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................CCACCGACACGCGATGCTAATTGAT.................................................................... 25 0 1 1.00 1 0 1 0 0 0
..............................................TCTTTCTCAAGTACGTCTCTGCAGCT................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0
..........................................................................................................................................................................................................................CAGCTAGCTCTCGCGTTCGGTCCA......... 24 0 1 1.00 1 1 0 0 0 0
...............................................................................CCAGCTCCAGTTTGAAACGAC....................................................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0
............................CGTCTTTCGTCTGTTTCTTCTTT........................................................................................................................................................................................................ 23 0 1 1.00 1 0 0 1 0 0
.......................................................................................................................................................................CGCGATGCTAATTGATGTGATTGAAC.......................................................... 26 0 1 1.00 1 1 0 0 0 0
............................................................................CAGCCAGCTCCAGTTTAAAACGACTA..................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................................................................CAGATAGCGCTCGCGTTAGGTCCAC........ 25 3 1 1.00 1 0 1 0 0 0
.......................................................................................................................CCACGCATTTCTTTGTTTCAATTAGTCCT....................................................................................................... 29 1 1 1.00 1 0 1 0 0 0
..........................................................................TTCAGCCAGCTCCAGTTTAAAACGAC....................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................................................................CCTGCATCAGCTAGCTCTCGCGTTC............... 25 0 1 1.00 1 0 0 1 0 0
.................................................................................................................................................................................ATTGATGTGATTGAACAGCCACT................................................... 23 0 1 1.00 1 1 0 0 0 0
...................................CGTCTGTTTCTTCTTTCTCAAGTACG.............................................................................................................................................................................................. 26 0 1 1.00 1 0 1 0 0 0
..........................................................................................................................................................................................................................CAGCTAGCTCTCGCGTTCGGTCCACC....... 26 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................................................................................CCAGCTAGCTCTCGCGTTCGGTCCAC........ 26 1 1 1.00 1 0 1 0 0 0
.........................................................................................................................CTGCATTTCTTTGTTTCAATTAGTTCT....................................................................................................... 27 2 1 1.00 1 1 0 0 0 0
.......................................TGTTTCTTCTTTCTCAAGTACGTCT........................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................ATTGATGTGATTGAACAGCCACTCT................................................. 25 0 1 1.00 1 1 0 0 0 0
................................................................CTGCAGCTTCTTCAGCCAGCTCCAGTT................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0
.................................TTCGTCTGTTTCTTCTTTCTCAAGTACGT............................................................................................................................................................................................. 29 0 1 1.00 1 1 0 0 0 0
........................................................................................................................CACGCATTTCTTTGTTTCAATTAG........................................................................................................... 24 0 1 1.00 1 0 1 0 0 0
....................AGCTCGTTCGTCTTTCGTCTGTTTCT............................................................................................................................................................................................................. 26 0 1 1.00 1 0 1 0 0 0
..........................................................................................................................CGCATTTCTTTGTTTCAATTAGTTCTT...................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
...................................................................................................................................TTGTTTCAATTAGTTCTTGCGTTCGT.............................................................................................. 26 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................CCGACACGCGATGCTAATTGATGTGATT.............................................................. 28 0 1 1.00 1 0 1 0 0 0
.................................TTCGTCTGTTTCTTCCTTCTCAAGT................................................................................................................................................................................................. 25 1 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................................................................................CATCAGCTAGCTCTCGCGTTCGGTCAAC........ 28 1 1 1.00 1 0 1 0 0 0
.......................................TGTTTCTTCTTTCTCAAGTACGT............................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0 0
GAAAAGACGATTTTTCGCTTAGCTCGT................................................................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................GAACAGCCACTCTACGCAGCACCCT..................................... 25 1 1 1.00 1 0 1 0 0 0
.............................................................................................................................ATTTCTTTGTTTCAATTAGTTCT....................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................................................................CAGCTAGCTCTCGCGTTCGGTCCAT........ 25 1 1 1.00 1 0 1 0 0 0
...........................................................................................................................................................................................................................AGCTAGCTCTCGCGTTCGGTCCA......... 23 0 1 1.00 1 1 0 0 0 0
.................................TTCGTCTGTTTCTTCTTTCTCAAGTA................................................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................CTAATTGATGTGATTGAACAGCCAC.................................................... 25 0 1 1.00 1 1 0 0 0 0
..................TTAGCTCGTTCGTCTTTCGTCTGT................................................................................................................................................................................................................. 24 0 1 1.00 1 1 0 0 0 0
...........................................................CGTCTCTGCAGCTTCTTCAGCCAGCTT..................................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0
....AGACGATTTTTCGCTTAGCTCGTTCGT............................................................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0
........................CGTTCGTCTTTCGTCTGTTTCTTCT.......................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................CTGCATTTCTTTGTTTCAATTAGTTCTT...................................................................................................... 28 2 1 1.00 1 1 0 0 0 0
......ACGATTTTTCGCTTAGCTCGTTCGTCT.......................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
.................................................TTCTCAAGTACGTCTCTGCAGCTTCT................................................................................................................................................................................ 26 0 1 1.00 1 0 1 0 0 0
.........................GTTCGTCTTTCGTCTGTTTCTTCTT......................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
..................TTAGCTCGTTCGTCTTTCGTCTGTTT............................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0
.....................................................................................................................................................................CACGCGATGCTAATTGATGTGATT.............................................................. 24 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................CCGACACGCGATGCTAATTGATGTGAT............................................................... 27 0 1 1.00 1 1 0 0 0 0
...........................................................CGTCTCTGCAGCTTCTTCAGCCAGCT...................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
....................................................................................................................CGACCACGCATTTCTTTGTTTCAAT.............................................................................................................. 25 0 1 1.00 1 1 0 0 0 0
.........ATTTTTCGCTTAGCTCGTTCGT............................................................................................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0
............................................................................................................................................................................TGCTAATTGATGTGATTGAACAGCCA..................................................... 26 0 1 1.00 1 0 1 0 0 0
.................................................TTCTCAAGTACGTCTCTGCAGCTT.................................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0
.................................TTCGTCTGTTTCTTCTTTCTCAAGT................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................................................CCACTCTAAGCAGCACCCTGCATCAGCT............................ 28 0 1 1.00 1 0 1 0 0 0
...............................................................................................ACGACTATGCGTCCGCCTACTCGAC................................................................................................................................... 25 0 6 0.67 4 4 0 0 0 0
..........................................................................................TTAAAACGACTATGCGTCCGCCTACT....................................................................................................................................... 26 0 5 0.60 3 3 0 0 0 0
................................................................................................CGACTATGCGTCCGCCTACTCGAC................................................................................................................................... 24 0 6 0.50 3 1 2 0 0 0
........................................................................................................................................TCAATTAGTTCTTGCGTTCGTTCCAC......................................................................................... 26 0 2 0.50 1 0 1 0 0 0
.......................................................................................................................................TTCAATTAGTTCTTGCGTTCGTTCCAC......................................................................................... 27 0 2 0.50 1 1 0 0 0 0
.........................................................................................TTTAAAACGACTATGCGTCCGCCTACT....................................................................................................................................... 27 0 5 0.40 2 2 0 0 0 0
.........................................CCCCTTCTTTCTCAAGTACGT............................................................................................................................................................................................. 21 3 3 0.33 1 1 0 0 0 0
...........................................................................................TAAAACGACTATGCGTCCGCCTACT....................................................................................................................................... 25 0 6 0.33 2 2 0 0 0 0
...............................................................................................ACGACTATGCGTCCGCCTAC........................................................................................................................................ 20 0 6 0.33 2 2 0 0 0 0
.........................................................................................GTTAAAACGACTATGCGTCCGCCTACT....................................................................................................................................... 27 1 5 0.20 1 1 0 0 0 0
........................................................................................................CGTCCGCCTACTCGACCACGCATTTCT........................................................................................................................ 27 0 5 0.20 1 1 0 0 0 0
..........................CTCGTCAATCGTCTGTTTCTTC........................................................................................................................................................................................................... 22 3 5 0.20 1 0 0 0 0 1
..............................................................................................AACGACTATGCGTCCGCCTACTCGA.................................................................................................................................... 25 0 6 0.17 1 1 0 0 0 0
............................................................................................AAAACGACTATGCATCCGCCTACTCGAC................................................................................................................................... 28 1 6 0.17 1 1 0 0 0 0
............................................................................................AAAACGACTATGCGTCCGCCTACTCGAC................................................................................................................................... 28 0 6 0.17 1 1 0 0 0 0
..........................................................................................CTAAAACGACTATGCGTCCGCCTACT....................................................................................................................................... 26 1 6 0.17 1 1 0 0 0 0
............................................................................................AAAACGACTATGCGTCCGCCTACT....................................................................................................................................... 24 0 6 0.17 1 0 1 0 0 0
.....................................................................................................................................................GAGTTCTTTCCACCGACACT.................................................................................. 20 3 8 0.13 1 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6541:558603-558853 - dmo_2200 CTTTTCTGCTAAAAAGCGAATCGAGCAAGCAGAAA----GCAGACAAAGAAGAAAGAGTTCATGCAGAGACGTCGAAGAAGTCGGTCGAGGTCAAAT-----TTTGCTGATACGCAGGCGGATGAGCTGGTGCGTAAA-GAAACAAAGTTAATCAA--------------------GAACGCAAGCAAGGTGGCTGTGCGCTACGATTAACTACACTAACTTGTCGG-----TGAGATTCGTCGTGGGACGTAGTCG------ATCGAGAGCGCAAGCCAGGTGGCTGTGCG
droVir3 scaffold_13274:132713-132959 + -----------AAAAGCGAAGC----AGACAGAAAAACTGAGAAGAGAGAAGAGAA-------------AAGTAATAGAAGGC---TGGAGTAGAGTTGGCGTTTTCTGTTACGCAGGCAGATGAGCCGGTGCGTAAGGGAAACAAAAACGATCAAAGCAGCTGGTCATCTATGAGGAACGTAGGCAAGTTGGCCAAGGCGTGGAATAGACAGCAGCAATTTTTTGGGTCGCTGGC-----------AAGGTGGTCGAGCGTAATAGAAGGCTGGAGCAGAGTCGCTGT---

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
CTTTTCTGCTAAAAAGCGAATCGAGCAAGCAGAAA----GCAGACAAAGAAGAAAGAGTTCATGCAGAGACGTCGAAGAAGTCGGTCGAGGTCAAAT-----TTTGCTGATACGCAGGCGGATGAGCTGGTGCGTAAA-GAAACAAAGTTAATCAA--------------------GAACGCAAGCAAGGTGGCTGTGCGCTACGATTAACTACACTAACTTGTCGG-----TGAGATTCGTCGTGGGACGTAGTCG------ATCGAGAGCGCAAGCCAGGTGGCTGTGCGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
........................................................AGTTCATGCAGAGACGTCGAAGA.....................................................................................................................................................................................................................2314.004310000
....................................................................................................................................................TTAATCAA--------------------GAACGCAAGCAAGGTG....................................................................................................2421.503300000
.........................................................................................................................................................................................................TACGATTAACTACACTAACTTGTCGG-----T...........................................................2711.001100000
........................................................AGTTCATGCAGAGACGTCGAAGAAGT..................................................................................................................................................................................................................2611.001100000
....................................................................................................................................................TTAATCAA--------------------GAACGCAAGCAAGGT.....................................................................................................2321.002200000
..................................................................................................................................................................................................TGTGCGCTACGATTAACTACACTAACTTG.....................................................................2911.001100000
............................GCAGAAA----GCAGACAAAGAAGAAAGAGT.........................................................................................................................................................................................................................................2711.001000001
....................................................................................................................................................TTAATCAA--------------------GAACGCAAGCAAGGTGG...................................................................................................2521.002200000
............................................CAAAGAAGAAAGAGTTCATGCAG.................................................................................................................................................................................................................................2311.001100000
..............................................................................................................................................ACAAAGTTAATCAA--------------------GAACGCAAG...........................................................................................................2311.001100000
..TTTCTGCTAAAAAGCGAATCGAGCAA........................................................................................................................................................................................................................................................................2611.001100000
........................................................AGTTCATGCAGAGACGTCGAAGAAG...................................................................................................................................................................................................................2511.001100000
....................................................................................................................................................TTAATCAA--------------------GAACGCAAGCAAGGTGGCTG................................................................................................2820.501100000
....................................................................................................................................................TTAATCAA--------------------GAACGCAAGCAAGGTGGC..................................................................................................2620.501100000
...................................................................................................................AGGCGGATGAGCTGGTGCGTAAA-.........................................................................................................................................................2350.201100000
......................................................................................................TTTGCTGATACGCAGGCGGATGAGCTGG..................................................................................................................................................................2860.171100000
...............................................................................................AT-----TTTGCTGATACGCAGGCGG...........................................................................................................................................................................2160.171100000
...........................................................................................................TGATACGCAGGCGGATGAGC.....................................................................................................................................................................2060.171000010
droVir3
-----------AAAAGCGAAGC----AGACAGAAAAACTGAGAAGAGAGAAGAGAA-------------AAGTAATAGAAGGC---TGGAGTAGAGTTGGCGTTTTCTGTTACGCAGGCAGATGAGCCGGTGCGTAAGGGAAACAAAAACGATCAAAGCAGCTGGTCATCTATGAGGAACGTAGGCAAGTTGGCCAAGGCGTGGAATAGACAGCAGCAATTTTTTGGGTCGCTGGC-----------AAGGTGGTCGAGCGTAATAGAAGGCTGGAGCAGAGTCGCTGT---SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................................................................................................................AAACGATCAAAGCAGCTGGTC.............................................................................................................................21710.00700021427000010100000050070022160611102011500000000000000000000020
..................................................................................................................................................AAACGATCAAAGCAGCTGGTCATC..........................................................................................................................2479.43661015164500000000000001004109060311200002300000000000000000000010
..................................................................................................................................................AAACGATCAAAGCAGCTGGTCA............................................................................................................................2277.00490010233000000000000000031013070321000043100000000000000000000020
..................................................................................................................................................AAACGATCAAAGCAGCTGGT..............................................................................................................................2085.2542000013200100110000005003003171802100101000000000000000000000000
..................................................................................................................................................AAACGATCAAAGCAGCTGGTCAT...........................................................................................................................2374.86340010401000000000000000050011150020000011200000000000000000000000
..................................................................................................................................................AAACGATCAAAGCAGCTGG...............................................................................................................................1984.3835003046100000000000005003002021240000000100000000000000000000010
..................................................................................................................................................................................................................................................................GCGTAATAGAAGGCTGGAGC..............2034.3313000000000000000000004000000013020001010100000000000000000000000
.................................................................................................................................................AAAACGATCAAAGCAGCTGGT..............................................................................................................................2183.502800000000016000000000000000000000110000000000100000000000000000000
.................................................................................................................................................AAAACGATCAAAGCAGCTGG...............................................................................................................................2082.38190000000003000000000000000000000140100000000000000000000000000010
.................................................................................................................................................AAAACGATCAAAGCAGCTGGTCATC..........................................................................................................................2571.7112000100000000000000001000000600040000000000000000000000000000000
..................................................................................................................................................AAACGATCAAAGCAGCTGGTCATCT.........................................................................................................................2571.7112001011100000000000001000003020110000000000000000000000000000000
..................................................................................................................................................AAACGATCAAAGCAGCTGGTCATT..........................................................................................................................2471.7112000030300000000000001000001000020100001000000000000000000000000
.................................................................................................................................................AAAACGATCAAAGCAGCTGGTC.............................................................................................................................2271.5711000000000100000000000000000101070000000100000000000000000000000
................................................................................................................................................................................................................................................................GAGCGTAATAGAAGGCTGGAGC..............2231.334000000000000000000002000001001000000000000000000000000000000000
..................................................................................................................................................................................................................................................................GCGTAATAGAAGGCTGGAGCAG............2231.334001000000000000000000000001000100000000100000000000000000000000
..................................................................................................................................................AAACGATCAAAGCAGCTGGTCATCTA........................................................................................................................2671.299002011000000000000000001001000020000100000000000000000000000000
.................................................................................................................................................AAAACGATCAAAGCAGCTGGTCA............................................................................................................................2371.299000000000100000000000000000300050000000000000000000000000000000
.............................................................................................................................................................................................................ATAGACAGCAGCAATTTTTTGGGTCG.............................................................2611.001000010000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................CTATGAGGAACGTAGGCAAGTTGGCCAAG..............................................................................................2911.001000000000000000000000000010000000000000000000000000000000000000
..............................................................................................................................................................................................TGGCCAAGGCGTGGAATA....................................................................................1811.001000000000000000000000000001000000000000000000000000000000000000
...............................GAAAAACTGAGAAGAGAGAAGAGA.............................................................................................................................................................................................................................................2411.001000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................GCGTAATAGAAGGCTGGAGCATT...........2331.003000000000000000000003000000000000000000000000000000000000000000
.................................................................................................................................GTGCGTAAGGGAAACAAAAACGATT..........................................................................................................................................2511.001000000000000000000000000000000000001000000000000000000000000000
..................................................................................................................................................AAACGATCAAAGCAGCTGGTCC............................................................................................................................2270.715001001200000000000000000000000000100000000000000000000000000000
...........................................................................................................................................................................................................................................................TGGTCGAGCGTAATAGAAGGCTGGAGC..............2730.672002000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................GCGTAATAGAAGGCTGGAGCA.............2130.672000000000020000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................GTCGAGCGTAATAGAAGGCTGGA................2330.672000000000100000000001000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................TCGAGCGTAATAGAAGGCTGGA................2230.672000000000000000000001000000000100000000000000000000000000000000
..................................................................................................................................................................................................................................................................GCGTAATAGAAGGCTGGAG...............1930.672000000000000000000000000000000010000001000000000000000000000000
...........................................................................................................................................................................................................................................C-----------AAGGTGGTCGAGCGTAATAGAAGGC....................2630.672000000000001000000000000000000010000000000000000000000000000000
...................................................................................................................................................AACGATCAAAGCAGCTGGTCATC..........................................................................................................................2370.574001001000000000000000000000010000100000000000000000000000000000
.................................................................................................................................................AAAACGATCAAAGCAGCTGGTCATT..........................................................................................................................2570.574000000000000000000000000000200000000200000000000000000000000000
.....................................................................AAGTAATAGAAGGC---TGGAGTAG......................................................................................................................................................................................................2240.502000000000000000000000002000000000000000000000000000000000000000
...................................................................................................................................................AACGATCAAAGCAGCTGG...............................................................................................................................1880.504000000000000000000000000000011010100000000000000000000000000000
..................................................................................................................................................AAACGATCAAAGCAGCTG................................................................................................................................1880.504000000000000000000000000002000200000000000000000000000000000000
.....................................................................AAGTAATAGAAGGC---TGGAGTAGAG....................................................................................................................................................................................................2440.502000000000020000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................ATAGACAGCAGCAATTTTTTCC.................................................................2220.501000010000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................AAAACGATCAAAGCAGCTGGTCATCTA........................................................................................................................2770.433000000000100000000000000000000000000200000000000000000000000000
..................................................................................................................................................AAACGATCAAAGCAGCTGGTCATG..........................................................................................................................2470.433000000000000000000000000000000000000002100000000000000000000000
.................................................................................................................................................AAAACGATCAAAGCAGCTG................................................................................................................................1980.383000000000000000000000000000000030000000000000000000000000000000
........................................................................................................................................................................................................................................TGGC-----------AAGGTGGTCGAGCGTAATAGAAG......................2730.331000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................................................................................GTCGAGCGTAATAGAAGGCTGGAGC..............2530.331000000000000000000000000000001000000000000000000000000000000000
....................................................AGAA-------------AAGTAATAGAAGGC---TGGAG.........................................................................................................................................................................................................2330.331000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................................................................................................................................................................CGTAATAGAAGGCTGGAGCAGAGTCG.......2630.331000000000000000000000000000000000100000000000000000000000000000
.........................................................................................................................................................................................................................................................GGTGGTCGAGCGTAATAGAAGG.....................2230.331000000000000000000001000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................GTAATAGAAGGCTGGAGCAGAGTC........2430.331100000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................AACGATCAAAGCAGCTGGTCATCTATGATC...................................................................................................................3060.332000000000000000000000000000000000000000000000000000000000000002
..............................................................................................................................................................................................................................................................TCGAGCGTAATAGAAGGCTGGAGC..............2430.331000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................................................CGAGCGTAATAGAAGGCTGGA................2130.331000000000000000000000001000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................AGCGTAATAGAAGGCTGGAG...............2030.331001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................AAGGTGGTCGAGCGTAATAGAAGGCT...................2630.331000000000100000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................CGTAATAGAAGGCTGGAGCAGA...........2230.331000000000000000000000000000001000000000000000000000000000000000
..............................................................................................................................................................................................................................................................TCGAGCGTAATAGAAGGCTGGAG...............2330.331000000000000000000000000000000000100000000000000000000000000000
...................................................................................................................................................................................................................................................................CGTAATAGAAGGCTGGAGCA.............2030.331000000000000000000000000000000010000000000000000000000000000000
........................................................................................................................................................................................................................................................AGGTGGTCGAGCGTAATAGAAGGC....................2430.331000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................................AGGTGGTCGAGCGTAATAGAAG......................2230.331000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................................................................................................................C-----------AAGGTGGTCGAGCGTAATAGAAG......................2430.331000000000000000000000000000010000000000000000000000000000000000
........................................................................................................................................................................................................................................TGGC-----------AAGGTGGTCGAGCGTAATAGA........................2530.331000000000000000000000000000001000000000000000000000000000000000
..................................................................................................................................................................................................................................................................GCGTAATAGAAGGCTGGAGCAGA...........2330.331000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................................................CGAGCGTAATAGAAGGCTGGAGCC.............2430.331100000000000000000000000000000000000000000000000000000000000000
...............................................AGAAGAGAA-------------AAGTAATAGAAGGC---T.............................................................................................................................................................................................................2460.332000000000010000000000000000000000000000000000000000000000000010
..................................................................................................................................................................................................................................................................GCGTAATAGAAGGCTGGAGCAGAAA.........2530.331000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................................................GTGGTCGAGCGTAATAGAAGGCTGG.................2530.331000000000000000000000000000000010000000000000000000000000000000
.................................................................................................................................................................................................................................................................AGCGTAATAGAAGGCTGGAGCAGAG..........2530.331000000000000000000000000000000010000000000000000000000000000000
..................................................................................................................................................................................................................................................................GCGTAATAGAAGGCTGGAGCAGAGTCG.......2730.331000000000000000000000000000000010000000000000000000000000000000
...........................................................................................................................................................................................................................................C-----------AAGGTGGTCGAGCGTAATAG.........................2130.331000000000000000000000000001000000000000000000000000000000000000
...........................................................................................................................................................................................................................................C-----------AAGGTGGTCGAGCGTAATAGAA.......................2330.331000000000000000000000000100000000000000000000000000000000000000
..................................................................................................................................................AAACGATCAAAGCAGCTGGTCATCTG........................................................................................................................2670.292000000000000000000000001000010000000000000000000000000000000000
...................................................................................................................................................AACGATCAAAGCAGCTGGTCA............................................................................................................................2170.292000000000000000000000000000000010000000100000000000000000000000
..................................................................................................................................................AAACGATCAAAGCAGCTGGTCATCTT........................................................................................................................2670.292000010100000000000000000000000000000000000000000000000000000000
.................................................................................................................................................AAAACGATCAAAGCAGCTGGTCAT...........................................................................................................................2470.292000000000000000000000000000100010000000000000000000000000000000
.................................................................................................................................................AAAACGATCAAAGCAGCTGGTCC............................................................................................................................2370.292000000000000000000000000000000020000000000000000000000000000000
...........................................................................................................................................................................................................................................................TGGTCGAGCGTAATAGAAGGCTGTCC...............2640.251100000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................TAGAAGGCTGGAGCAGAGTCG.......2140.251000000000000000000000000000000010000000000000000000000000000000
..................................................................................................................................................................................................................................................................GCGTAATAGAAGGCTGGAC...............1940.251000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................GATGAGCCGGTGCGTAAG..........................................................................................................................................................1840.251000000000000000000000000000000000000001000000000000000000000000
..............................................GAGAAGAGAA-------------AAGTAATAGAAGGC---T.............................................................................................................................................................................................................2560.171000100000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................AAACGATCAAAGCAGCTGGTCATCTATG......................................................................................................................2860.171001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................CGATCAAAGCAGCTGGTCATCTATGAGG...................................................................................................................2860.171001000000000000000000000000000000000000000000000000000000000000
................................................GAAGAGAA-------------AAGTAATAGAAGGC---..............................................................................................................................................................................................................2260.171000000000000000000000000001000000000000000000000000000000000000
.............................................AGAGAAGAGAA-------------AAGTAATAGAAG...................................................................................................................................................................................................................2360.171000000000000000000000000001000000000000000000000000000000000000
..............................................GAGAAGAGAA-------------AAGTAATAGAAGG..................................................................................................................................................................................................................2360.171000000000000000000000000000100000000000000000000000000000000000
...............................................AGAAGAGAA-------------AAGTAATAGAAGGC---TG............................................................................................................................................................................................................2560.171000000000000000000000000001000000000000000000000000000000000000
...............................................AGAAGAGAA-------------AAGTAATAGAAGGC---..............................................................................................................................................................................................................2360.171000000000100000000000000000000000000000000000000000000000000000
................................................GAAGAGAA-------------AAGTAATAGAAGG..................................................................................................................................................................................................................2160.171000000000000000000000001000000000000000000000000000000000000000
..................................................................................................................................................AAACGATCAAAGCAGCTGGTCATCA.........................................................................................................................2570.141000000000000000000000000000010000000000000000000000000000000000
...................................................................................................................................................AACGATCAAAGCAGCTGGTCAT...........................................................................................................................2270.141000000000000000000000000000010000000000000000000000000000000000
..................................................................................................................................................AAACGATCAAAGCAGCTGGTCATA..........................................................................................................................2470.141000000000000000000000000001000000000000000000000000000000000000
......................................................................................................................................................GATCAAAGCAGCTGGTCATCTATGAG....................................................................................................................2670.141001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................AAACGATCAAAGCAGCTGGTCT............................................................................................................................2270.141000000000000000000001000000000000000000000000000000000000000000
.................................................................................................................................................AAAACGATCAAAGCAGCTGGTCATG..........................................................................................................................2570.141000000000000000000000000000100000000000000000000000000000000000
..................................................................................................................................................AAACGATCAAAGCAGCTGGTCATAA.........................................................................................................................2570.141000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................AAACGATCAAAGCAGCTGGTCATTC.........................................................................................................................2570.141000000000000000000000000000000100000000000000000000000000000000
..................................................................................................................................................AAACGATCAAAGCAGCTGGTCATCTAT.......................................................................................................................2770.141000000000000000000000000001000000000000000000000000000000000000
.................................................................................................................................................AAAACGATCAAAGCAGCTGGTCATCTG........................................................................................................................2770.141000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................ACGATCAAAGCAGCTGGTCATCTATG......................................................................................................................2670.141001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................AACGATCAAAGCAGCTGGTCATCC.........................................................................................................................2470.141001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................AAAACGATCAAAGCAGCTGGTCATCC.........................................................................................................................2670.141000000000000000000000000000000010000000000000000000000000000000
.................................................................................................................................................AAAACGATCAAAGCAGCTGGTCAG...........................................................................................................................2470.141000000000000000000000000000100000000000000000000000000000000000
.................................................................................................................................................AAAACGATCAAAGCAGCTGGTCT............................................................................................................................2370.141000000000000000000000000000000010000000000000000000000000000000
...................................................................................................................................................AACGATCAAAGCAGCTGGTCATG..........................................................................................................................2370.141001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................AAACGATCAAAGCAGCTGGTCATCG.........................................................................................................................2570.141000000000000000000000000001000000000000000000000000000000000000
.................................................................................................................................................AAAACGATCAAAGCAGCTGGTCATCTAA.......................................................................................................................2870.141001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................AACGATCAAAGCAGCTGGT..............................................................................................................................1980.131000000000000000000000000000000000000000100000000000000000000000
.................................................................................................................................................AAAACGATCAAAGCAGCTGGTAG............................................................................................................................2380.131000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................................................ATCAAAGCAGCTGGTCATCTAT.......................................................................................................................2280.131000000000000000000000000000000010000000000000000000000000000000
.....................................................................................................................................................CGATCAAAGCAGCTGGTCATCT.........................................................................................................................2280.131000000000000000000000000000000000000001000000000000000000000000
....................................................................................................................................................ACGATCAAAGCAGCTGGTCATCT.........................................................................................................................2380.131001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................AAACGATCAAAGCAGCTGGTA.............................................................................................................................2180.131000000000000000000000000000000000100000000000000000000000000000
..................................................................................................................................................AAACGATCAAAGCAGCTGGG..............................................................................................................................2080.131100000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................TCAAAGCAGCTGGTCATCTA........................................................................................................................2080.131000000000000000000000000000010000000000000000000000000000000000
..............................................................................................................................................................CAGCTGGTCATCTATGAGGAAC................................................................................................................2280.131000000000000000000000000000000000000000000000000000000000001000
.......................................................................................................................................................ATCAAAGCAGCTGGTCATCTTA.......................................................................................................................2290.111000000000000000000000000000000010000000000000000000000000000000
..................................................................................................................................................AAACGATCAAAGCAGCTTT...............................................................................................................................19120.081001000000000000000000000000000000000000000000000000000000000000

Generated: 05/18/2015 at 02:08 AM