ID:

dmo_22

 Coordinate:

scaffold_6496:17707902-17707969 -

 Confidence:

Known Ortholog

 Class:

Canonical miRNA

 Genomic Locale:

intron

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-30.0 -29.6 -29.6

Flybase annnotation

intron [Dmoj\GI18694-in]; utr5 [utr5_plus_3445]

No Repeatable elements found

Sense Strand Reads

AAAGTTGTTGGCGAACTTTCAATGGCTCATTTAACTGGCTAATTGCCTTCTCTCGAATTGCATTATGGCCGATGACACAATTCTGCAAAATCATCAGTTGGAATGCCATTCGGGTCAAGGCATTTACGAATCGCCAACGAGCAGCAAATTCGATATCAGTTCTGCAAA

***********************************....(((.((((((..(((((((.(((((..(((.(((((...............))))).)))..))))).)))))))..)))))).)))......************************************ 		Read size # Mismatch Hit Count Total Norm Total M046

female body

 V056

head

 V049

head

 V110

male body		 M060

embryo

 V041

embryo
..................................................TCTCGAATTGCATTATGGCCGA................................................................................................ 22 0 1 11060.00 11060 5635 2349 1597 832 592 55
..................................................TCTCGAATTGCATTATGGCCG................................................................................................. 21 0 1 1951.00 1951 937 503 336 154 19 2
...................................................CTCGAATTGCATTATGGCCGA................................................................................................ 21 0 1 494.00 494 488 2 0 0 4 0
...............................................................................................AGTTGGAATGCCATTCGGGTCA................................................... 22 0 1 346.00 346 42 80 44 146 18 16
............................................................................................ATCAGTTGGAATGCCATTCGGG...................................................... 22 0 1 318.00 318 40 49 44 155 21 9
............................................................................................ATCAGTTGGAATGCCATTCGG....................................................... 21 0 1 215.00 215 22 32 22 135 1 3
..................................................TCTCGAATTGCATTATGGCC.................................................................................................. 20 0 1 141.00 141 57 30 16 11 26 1
..................................................TCTCGAATTGCATTATGGCCGC................................................................................................ 22 1 1 104.00 104 4 50 46 2 2 0
...................................................CTCGAATTGCATTATGGCCG................................................................................................. 20 0 1 81.00 81 80 1 0 0 0 0
..................................................TCTCGAATTGCATTATGGCCGAT............................................................................................... 23 0 1 79.00 79 49 17 7 5 1 0
..................................................TCTCGAATTGCATTATTGCCGA................................................................................................ 22 1 1 70.00 70 4 8 55 3 0 0
...............................................................................................AGTTGGAATGCCATTCGGGTC.................................................... 21 0 1 63.00 63 9 8 5 11 25 5
.................................................CTCTCGAATTGCATTATGGCCGA................................................................................................ 23 0 1 59.00 59 11 32 12 0 3 1
..................................................TCTCGAATTGCCTTATGGCCGA................................................................................................ 22 1 1 53.00 53 1 4 46 0 0 2
..................................................TCTCGAATTGCATTATGGCCGT................................................................................................ 22 1 1 51.00 51 12 29 6 2 2 0
....................................................TCGAATTGCATTATGGCCGA................................................................................................ 20 0 1 41.00 41 25 6 4 2 2 2
..................................................TCTCGAATTGCGTTATGGCCGA................................................................................................ 22 1 1 40.00 40 30 8 1 0 0 1
.....................................................CGAATTGCATTATGGCCGATGA............................................................................................. 22 0 1 37.00 37 27 2 2 3 1 2
..................................................TCTCGAATTGCATTATGTCCGA................................................................................................ 22 1 1 33.00 33 0 13 16 2 2 0
..................................................TCTCGAATTGCATTATGGC................................................................................................... 19 0 1 33.00 33 21 6 2 3 1 0
........................................................................TGACACAATTCTGCAAAATCATC......................................................................... 23 0 1 28.00 28 4 0 1 0 23 0
..................................................TCTCGAATTGCATTATGGCCGAA............................................................................................... 23 1 1 27.00 27 17 6 1 3 0 0
..................................................TCTTGAATTGCATTATGGCCGA................................................................................................ 22 1 1 26.00 26 0 2 2 1 21 0
............................................................................................ATCAGTTGGAATGCCATTCG........................................................ 20 0 1 26.00 26 6 4 3 13 0 0
..................................................TCTCGAATTGCATTCTGGCCGA................................................................................................ 22 1 1 25.00 25 0 4 19 0 2 0
..................................................TGTCGAATTGCATTATGGCCGA................................................................................................ 22 1 1 22.00 22 0 1 0 0 21 0
............................................................................................ATCAGTTGGAATGCCATTCGGGT..................................................... 23 0 1 21.00 21 4 3 0 14 0 0
..................................................TCTCAAATTGCATTATGGCCGA................................................................................................ 22 1 1 20.00 20 9 0 1 3 7 0
..................................................TCTCGAATTGCATTATGGCCGG................................................................................................ 22 1 1 19.00 19 0 12 6 0 1 0
..................................................TCTCGAATTGCATTATGGCCTA................................................................................................ 22 1 1 15.00 15 0 6 8 0 1 0
..................................................TCCCGAATTGCATTATGGCCGA................................................................................................ 22 1 1 15.00 15 1 1 2 0 11 0
..................................................TCTCGAATTGCATTATCGCCGA................................................................................................ 22 1 1 14.00 14 2 6 5 1 0 0
..................................................TCTCGAATTGCATTATTGCCG................................................................................................. 21 1 1 14.00 14 0 0 14 0 0 0
..................................................TCTCGAATTGCATTATGGCCT................................................................................................. 21 1 1 12.00 12 3 0 9 0 0 0
..................................................TCTCGAATTTCATTATGGCCGA................................................................................................ 22 1 1 12.00 12 3 3 5 1 0 0
..................................................TCTCGAATTGCATTATAGCCGA................................................................................................ 22 1 1 11.00 11 1 6 4 0 0 0
..................................................TCTCGAATTGCATTATGCCCGA................................................................................................ 22 1 1 11.00 11 0 6 3 0 2 0
..................................................CCTCGAATTGCATTATGGCCGA................................................................................................ 22 1 1 11.00 11 2 3 2 2 2 0
..................................................TATCGAATTGCATTATGGCCGA................................................................................................ 22 1 1 11.00 11 0 7 3 1 0 0
....................................................TCGAATTGCATTATGGCCG................................................................................................. 19 0 1 11.00 11 7 2 2 0 0 0
..................................................TCTCGAATTGCATTATGGCCGATG.............................................................................................. 24 0 1 10.00 10 5 2 1 2 0 0
..................................................TCTCGAATTGCATTATGGACGA................................................................................................ 22 1 1 10.00 10 1 4 3 1 1 0
...............................................................................................ATTTGGAATGCCATTCGGGTC.................................................... 21 1 1 10.00 10 0 0 0 0 10 0
......................................................GAATTGCATTATGGCCGA................................................................................................ 18 0 1 9.00 9 5 3 0 0 1 0
..................................................TCTCGGATTGCATTATGGCCGA................................................................................................ 22 1 1 9.00 9 0 5 4 0 0 0
..................................................TCTCGAAGTGCATTATGGCCGA................................................................................................ 22 1 1 9.00 9 0 6 3 0 0 0
.................................................ATCTCGAATTGCATTATGGCCGA................................................................................................ 23 1 1 9.00 9 9 0 0 0 0 0
..................................................TCTCGAATTCCATTATGGCCGA................................................................................................ 22 1 1 8.00 8 1 4 3 0 0 0
..................................................TCTCGAATTGCCTTATGGCCG................................................................................................. 21 1 1 8.00 8 1 1 6 0 0 0
...............................................................................................ATTTGGAATGCCATTCGGGTCA................................................... 22 1 1 8.00 8 0 0 0 0 8 0
.............................................................................................TCAGTTGGAATGCCATTCGGG...................................................... 21 0 1 8.00 8 3 1 2 1 1 0
..................................................TCTCGAATTGCATTATGGCTGA................................................................................................ 22 1 1 8.00 8 1 4 1 2 0 0
...............................................................................................AGTTGGAATGCCATTCGGGT..................................................... 20 0 1 8.00 8 2 1 2 3 0 0
..................................................TCTCGAGTTGCATTATGGCCGA................................................................................................ 22 1 1 8.00 8 2 6 0 0 0 0
..................................................TCTCGCATTGCATTATGGCCGA................................................................................................ 22 1 1 7.00 7 0 1 5 0 0 1
..................................................TCTCGAATTGCATTATGGCCCA................................................................................................ 22 1 1 7.00 7 0 2 3 0 1 1
............................................................................................ATCAGTTGGAATGCCATTCGGGA..................................................... 23 1 1 7.00 7 0 1 0 6 0 0
.................................................CTCTCGAATTGCATTATGGCCG................................................................................................. 22 0 1 7.00 7 4 1 2 0 0 0
..................................................TCTCGAATTGCATTCTGGCCG................................................................................................. 21 1 1 7.00 7 0 2 5 0 0 0
..................................................TCGCGAATTGCATTATGGCCGA................................................................................................ 22 1 1 7.00 7 1 5 0 0 1 0
..................................................TCTCGAATCGCATTATGGCCGA................................................................................................ 22 1 1 7.00 7 1 1 3 1 1 0
...................................................CTCGAATTGCATTATGGCCGAT............................................................................................... 22 0 1 7.00 7 7 0 0 0 0 0
.....................................................CGAATTGCATTATGGCCGATG.............................................................................................. 21 0 1 7.00 7 4 2 1 0 0 0
..................................................TCTCGAATTGCATTATGGCCAA................................................................................................ 22 1 1 7.00 7 0 0 5 0 2 0
..................................................TCTAGAATTGCATTATGGCCGA................................................................................................ 22 1 1 7.00 7 0 5 0 2 0 0
.....................................................CGAATTGCATTATGGCCGA................................................................................................ 19 0 1 7.00 7 7 0 0 0 0 0
..................................................GCTCGAATTGCATTATGGCCGA................................................................................................ 22 1 1 6.00 6 0 1 2 0 3 0
.................................................TTCTCGAATTGCATTATGGCCGA................................................................................................ 23 1 1 6.00 6 6 0 0 0 0 0
...................................................CTCGAATTGCATTATGGCC.................................................................................................. 19 0 1 6.00 6 6 0 0 0 0 0
..................................................TCTCGAATTGCATTATGTCCG................................................................................................. 21 1 1 6.00 6 0 1 2 3 0 0
..................................................TCTCGAATTGCCTTATGGCCGC................................................................................................ 22 2 1 6.00 6 0 3 3 0 0 0
............................................................................................ATCAGTTGGAATGCCATTCGGT...................................................... 22 1 1 6.00 6 0 0 3 3 0 0
..................................................TCTCGAATTGAATTATGGCCGA................................................................................................ 22 1 1 6.00 6 0 3 1 1 1 0
........................................................................TTACACAATTCTGCAAAATCATC......................................................................... 23 1 1 6.00 6 0 0 0 0 6 0
................................................................................................GTTGGAATGCCATTCGGGTCA................................................... 21 0 1 6.00 6 6 0 0 0 0 0
..................................................TCTCGAATTGCATTACGGCCGA................................................................................................ 22 1 1 6.00 6 1 4 1 0 0 0
..................................................TCTCGAATTGCATTATTGCCTA................................................................................................ 22 2 1 6.00 6 0 1 5 0 0 0
..................................................TCTCGACTTGCATTATGGCCGA................................................................................................ 22 1 1 6.00 6 0 2 4 0 0 0
..................................................TCTCTAATTGCATTATGGCCGA................................................................................................ 22 1 1 6.00 6 4 0 1 1 0 0
.............................................................................................TCAGTTGGAATGCCATTCGGGT..................................................... 22 0 1 5.00 5 3 0 1 0 1 0
..................................................TCTCGAATTGCGTTATGGCCG................................................................................................. 21 1 1 5.00 5 4 1 0 0 0 0
..................................................TCTCGAATTGCATTATGGCCGATT.............................................................................................. 24 1 1 5.00 5 4 0 1 0 0 0
..................................................TCGCGGATTGCATTATGGCCGA................................................................................................ 22 2 1 5.00 5 0 2 3 0 0 0
..................................................TCTCGAATTGCATTATGGCCGAG............................................................................................... 23 1 1 5.00 5 5 0 0 0 0 0
..................................................TCTCGAATTGCTTTATGGCCGA................................................................................................ 22 1 1 5.00 5 3 1 1 0 0 0
..................................................TCTCGAATTGCATTATGACCGA................................................................................................ 22 1 1 5.00 5 0 2 2 0 0 1
..................................................TTTCGAATTGCATTATGGCCGA................................................................................................ 22 1 1 5.00 5 0 1 2 0 2 0
...............................................................................................AGCTGGAATGCCATTCGGGTC.................................................... 21 1 1 5.00 5 0 0 0 0 5 0
..................................................TCTCGAATTGCATTATTGCCGT................................................................................................ 22 2 1 5.00 5 0 3 2 0 0 0
..................................................TCTCGAATTGCATTGTGGCCG................................................................................................. 21 1 1 4.00 4 2 2 0 0 0 0
...............................................................................................AGTTGGAATGCCATTCGGG...................................................... 19 0 1 4.00 4 1 2 1 0 0 0
..................................................TCTCGAATTGCATTATGG.................................................................................................... 18 0 1 4.00 4 1 1 1 0 1 0
..................................................TCTCGAATTGGATTATGGCCGA................................................................................................ 22 1 1 4.00 4 2 1 1 0 0 0
............................................................................................ATCAGTTGGAATGCCATTCTGG...................................................... 22 1 1 4.00 4 0 2 2 0 0 0
..................................................ACTCGAATTGCATTATGGCCGA................................................................................................ 22 1 1 4.00 4 2 1 0 0 1 0
..................................................TCTCGAATTGCATTATTGCCGC................................................................................................ 22 2 1 4.00 4 0 2 2 0 0 0
..................................................TCTCGAATTGCATTGTGGCCGA................................................................................................ 22 1 1 4.00 4 1 0 3 0 0 0
..................................................TCTCGAATTGCATTATGGCCGAC............................................................................................... 23 1 1 4.00 4 4 0 0 0 0 0
..................................................TCTCGAATTGCCTTCTGGCCGA................................................................................................ 22 2 1 4.00 4 0 0 4 0 0 0
..................................................TCTCGAATTGCATTATGGCAGA................................................................................................ 22 1 1 4.00 4 0 3 0 1 0 0
...............................................................................................GGTTGGAATGCCATTCGGGTCA................................................... 22 1 1 4.00 4 1 1 1 1 0 0
..................................................TCTCGAATTGCATTAGGGCCGA................................................................................................ 22 1 1 4.00 4 0 3 1 0 0 0
..................................................TCTCGAACTGCATTATGGCCGA................................................................................................ 22 1 1 4.00 4 2 1 1 0 0 0
..................................................TCTCGAATTGCATTATGGTCGA................................................................................................ 22 1 1 4.00 4 1 2 0 1 0 0
............................................................................................ATCAGTTGGAATGCCATTCGGC...................................................... 22 1 1 4.00 4 1 0 0 1 2 0
..................................................TCTCGAATTGCACTATGGCCGA................................................................................................ 22 1 1 4.00 4 1 3 0 0 0 0
...............................................................................................AGCTGGAATGCCATTCGGGTCA................................................... 22 1 1 4.00 4 0 0 0 0 4 0
..................................................TCTCGAATTGCATTATGGCCGTT............................................................................................... 23 1 1 4.00 4 2 1 0 1 0 0
..................................................TCGCGAAGTGCATTATGGCCGA................................................................................................ 22 2 1 4.00 4 0 2 2 0 0 0
..................................................TCTCGAATTGCAGTATGGCCGA................................................................................................ 22 1 1 3.00 3 0 2 1 0 0 0
..................................................TCTCGAATTGCATTCTGGCCGC................................................................................................ 22 2 1 3.00 3 0 1 2 0 0 0
..................................................TCTCGGATTGCATTATGGCCGG................................................................................................ 22 2 1 3.00 3 0 2 1 0 0 0
..................................................TCTCGACTTGCATTATGGCCGC................................................................................................ 22 2 1 3.00 3 0 1 2 0 0 0
..................................................TCTCGGATTGCATTATGGCCGC................................................................................................ 22 2 1 3.00 3 0 1 2 0 0 0
..................................................CCTCGAATTGCATTATGGCCG................................................................................................. 21 1 1 3.00 3 1 0 1 0 1 0
.................................................CTCTCGAATTGCATTATGGCCGC................................................................................................ 23 1 1 3.00 3 0 2 1 0 0 0
..................................................TCTCGAATTGCATTAAGGCCGA................................................................................................ 22 1 1 3.00 3 2 0 1 0 0 0
..................................................TCTCGAATTGCATTATGGCCGAAA.............................................................................................. 24 2 1 3.00 3 3 0 0 0 0 0
............................................................................................AGCAGTTGGAATGCCATTCGGG...................................................... 22 1 1 3.00 3 0 0 0 0 3 0
..................................................TCTCGAATTGTATTATGGCCGA................................................................................................ 22 1 1 3.00 3 0 1 1 0 1 0
..................................................TCTAGAATTGCATTATGGCCG................................................................................................. 21 1 1 3.00 3 0 2 0 1 0 0
.................................................................................................TTGGAATGCCATTCGGGTCA................................................... 20 0 1 3.00 3 2 0 0 1 0 0
..................................................TCTCGGATTGCCTTATGGCCGA................................................................................................ 22 2 1 3.00 3 0 2 1 0 0 0
..................................................TCTCGTATTGCATTATGGCCGA................................................................................................ 22 1 1 3.00 3 1 1 0 0 1 0
.............................................................................................TCAGTTGGAATGCCATTCGGGTC.................................................... 23 0 1 3.00 3 0 0 0 2 1 0
............................................................................................ATCAGTTGGAATGCCATTCGT....................................................... 21 1 1 3.00 3 1 1 0 1 0 0
..................................................TCTCGAATTGCATTATCGCCTA................................................................................................ 22 2 1 3.00 3 0 0 3 0 0 0
..................................................TGTCAAATTGCATTATGGCCGA................................................................................................ 22 2 1 3.00 3 0 0 0 0 3 0
..................................................TCTCGAATAGCATTATGGCTGA................................................................................................ 22 2 1 3.00 3 3 0 0 0 0 0
..................................................TCTCGAATTGCATTATGGCCGTC............................................................................................... 23 2 1 3.00 3 1 1 0 1 0 0
..................................................TCTCGAAATGCATTATGGCCGA................................................................................................ 22 1 1 3.00 3 0 1 0 0 2 0
..................................................TCTCGAATTGCGTTATGGCCGG................................................................................................ 22 2 1 3.00 3 1 1 1 0 0 0
..................................................TCTCGCATTGCATTATGGCCGC................................................................................................ 22 2 2 2.50 5 0 1 4 0 0 0
..................................................TCTCGAAGTGCATTATGGCCGT................................................................................................ 22 2 1 2.00 2 0 1 1 0 0 0
..................................................TCGCGAATTGCATTAGGGCCGA................................................................................................ 22 2 1 2.00 2 0 2 0 0 0 0
............................................................................................ATCAGTTGGAATGCCATTCGGA...................................................... 22 1 1 2.00 2 0 0 0 2 0 0
............................................................................................ATCAGTTGGAATGCCATTCGTG...................................................... 22 1 1 2.00 2 0 1 1 0 0 0
..................................................TCGCGAATGGCATTATGGCCGA................................................................................................ 22 2 1 2.00 2 0 1 1 0 0 0
...............................................................................................TGTTGGAATGCCATTCGGGTC.................................................... 21 1 1 2.00 2 0 0 0 0 2 0
..................................................TCTCGAATTGCATTATCGCCGC................................................................................................ 22 2 1 2.00 2 0 2 0 0 0 0
..................................................TCTCGAATTTCATTATGGCCG................................................................................................. 21 1 1 2.00 2 2 0 0 0 0 0
..................................................TCTCCAATTGCATTATGGCCG................................................................................................. 21 1 1 2.00 2 1 0 1 0 0 0
.....................................................CGAATTGCATTATGGCCGATGAA............................................................................................ 23 1 1 2.00 2 0 0 1 1 0 0
...................................................CTCGAATTGCAGTATGGCCGA................................................................................................ 21 1 1 2.00 2 2 0 0 0 0 0
.........................................ATTGCCTTCTCTCGAATTGCA.......................................................................................................... 21 0 1 2.00 2 0 1 0 1 0 0
..................................................TCTCTAATTGCATTATGGCCGC................................................................................................ 22 2 1 2.00 2 0 2 0 0 0 0
............................................................................................ATCAGTTGTAATGCCATTCGGG...................................................... 22 1 1 2.00 2 0 0 0 2 0 0
..................................................TCTCGAATTGCATTATAGCCG................................................................................................. 21 1 1 2.00 2 1 0 1 0 0 0
..................................................TCTCGAATTGCATTCAGGCCGA................................................................................................ 22 2 1 2.00 2 0 1 1 0 0 0
..................................................TCTCGAATTGCATTATTGCC.................................................................................................. 20 1 1 2.00 2 0 0 2 0 0 0
..................................................TCTCGAATTGCATTATGGCCGCT............................................................................................... 23 1 1 2.00 2 0 1 1 0 0 0
..................................................TCCCGAATTGCATTATGGCCGC................................................................................................ 22 2 1 2.00 2 0 0 1 0 1 0
..................................................TATCGAATTGCATTATGGACGA................................................................................................ 22 2 1 2.00 2 0 0 2 0 0 0
..................................................TCTCGAAGTGCGTTATGGCCGA................................................................................................ 22 2 1 2.00 2 0 2 0 0 0 0
...................................................CTCGAATTGCATTATGGCCGAA............................................................................................... 22 1 1 2.00 2 2 0 0 0 0 0
..................................................TCCCGAATTGCATTATGGCC.................................................................................................. 20 1 1 2.00 2 0 0 0 0 2 0
..................................................TCGCGAATTGCATTATGGCCG................................................................................................. 21 1 1 2.00 2 0 2 0 0 0 0
.................................................GTCTCGAATTGCATTATGGCCGA................................................................................................ 23 1 1 2.00 2 2 0 0 0 0 0
..................................................TCTCGACTTGCATTCTGGCCGC................................................................................................ 22 3 1 2.00 2 0 0 2 0 0 0
...............................................................................................AGTTGGAATGCCATTCGGGTCC................................................... 22 1 1 2.00 2 0 0 2 0 0 0
..................................................TCTCGAATTGCCTTATGGCCGG................................................................................................ 22 2 1 2.00 2 0 1 1 0 0 0
...............................................................................................AGTTGGAATGACATTCGGGTCA................................................... 22 1 1 2.00 2 0 1 0 0 1 0
..................................................TCTCGAATTGCATTATTGCCT................................................................................................. 21 2 1 2.00 2 0 1 1 0 0 0
............................................................................................ATCATTTGGAATGCCATTCGGG...................................................... 22 1 1 2.00 2 0 0 0 2 0 0
..................................................TCTTGAATTGCATTATGGCCG................................................................................................. 21 1 1 2.00 2 0 1 0 0 1 0
..................................................TCTCGAATTGCATTATGGCCA................................................................................................. 21 1 1 2.00 2 1 0 1 0 0 0
..................................................TCTCGAACTGCATTATGGCCG................................................................................................. 21 1 1 2.00 2 0 1 1 0 0 0
.............................................................................................TCAGTTGGAATGCCATTCGGGTCA................................................... 24 0 1 2.00 2 1 0 0 0 1 0
..................................................TCTCGAATTGCATTATGGCCGAAT.............................................................................................. 24 2 1 2.00 2 2 0 0 0 0 0
..................................................TCTCGAATTGCATCATGGCCGA................................................................................................ 22 1 1 2.00 2 0 1 0 0 1 0
.............................................................................................TCAGTTGGAATGCCATTCGG....................................................... 20 0 1 2.00 2 2 0 0 0 0 0
..................................................TCTCGAATTGCGTTATGGCCGT................................................................................................ 22 2 1 2.00 2 1 1 0 0 0 0
......................................................GAATTGCATTATGGCCGATGA............................................................................................. 21 0 1 2.00 2 2 0 0 0 0 0
..................................................TCTCGAATTGCATTATGGCCC................................................................................................. 21 1 1 2.00 2 0 0 0 0 2 0
............................................................................................ATCGGTTGGAATGCCATTCGGG...................................................... 22 1 1 2.00 2 0 0 0 2 0 0
...............................................................................................AGTTGGAGTGCCATTCGGGTCA................................................... 22 1 1 2.00 2 1 0 0 1 0 0
..................................................TCTCGAATTGCATTATGGCCTC................................................................................................ 22 2 1 2.00 2 0 2 0 0 0 0
...................................................CTCGAATTGCAATATGGCCGA................................................................................................ 21 1 1 2.00 2 2 0 0 0 0 0
..................................................TCTCGAATTGCATTATTACCGT................................................................................................ 22 3 1 2.00 2 0 0 2 0 0 0
..................................................TCTCAAATTGCATTATGGCCG................................................................................................. 21 1 1 2.00 2 1 0 0 1 0 0
..................................................TCTCGCATTGCCTTATGGCCGA................................................................................................ 22 2 1 2.00 2 0 0 2 0 0 0
............................................................................................ATCAGTTGGAATGCCATTCGGGAT.................................................... 24 2 1 2.00 2 0 2 0 0 0 0
...............................................................................................AGTTGGAATGCCATTCTGGTCA................................................... 22 1 1 2.00 2 0 0 1 1 0 0
..................................................TCTCGAATGGCATTATGGCCGA................................................................................................ 22 1 1 2.00 2 0 2 0 0 0 0
..................................................TCACGAATTGCATTATGGCCGT................................................................................................ 22 2 1 2.00 2 0 2 0 0 0 0
..................................................TCTCGAATTGCATTATGGGCGA................................................................................................ 22 1 1 2.00 2 0 0 2 0 0 0
..................................................TCGCGGAGTGCATTATGGCCGA................................................................................................ 22 3 2 1.50 3 0 1 2 0 0 0
................................................ATTCTCGAATTGCATTATGGCCG................................................................................................. 23 2 1 1.00 1 1 0 0 0 0 0
..................................................TCTCGAGTTGCATTATGGCCG................................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0
........................................................ATTCCATTATGGCCGATGA............................................................................................. 19 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................AGTTGGAATGCCATTCGGCTT.................................................... 21 2 1 1.00 1 0 0 1 0 0 0
............................................................................................ATCAGTACCAATGCCATTCGGG...................................................... 22 3 1 1.00 1 0 1 0 0 0 0
..................................................TCTCGAATTGCAGTCTGGCCGC................................................................................................ 22 3 1 1.00 1 0 0 1 0 0 0
..................................................TCGCGACTTGCATTATGGCCGA................................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
..................................................TCTCGAATTGCACTATGGCCG................................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0
..................................................TCTCGATTTGCATTAAGGCCGT................................................................................................ 22 3 1 1.00 1 0 1 0 0 0 0
............................................................................................ATCAGTTGGAATGCCCTTCGT....................................................... 21 2 1 1.00 1 0 0 0 1 0 0
..................................................TCACGTATTGCATTATGGCCGC................................................................................................ 22 3 1 1.00 1 0 1 0 0 0 0
.............................................................................CAATTCTGCAAAATCATC......................................................................... 18 0 1 1.00 1 0 0 0 0 1 0
................................................................................................GTTGGAATGCCATTCGGGT..................................................... 19 0 1 1.00 1 1 0 0 0 0 0
..................................................TCTCGAATTGCATTAGGGCTGA................................................................................................ 22 2 1 1.00 1 0 1 0 0 0 0
............................................ACGATCTCTCGAATTGCATTATGGCCGA................................................................................................ 28 3 1 1.00 1 0 0 0 0 1 0
..................................................TCGCGAATTGCATTATGGCCTATT.............................................................................................. 24 3 1 1.00 1 0 0 1 0 0 0
..................................................TCTCGCATTGCATTATGGCCGCT............................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0
.............................................CAAACTCTCGAATTGCATTATGGCCGA................................................................................................ 27 3 1 1.00 1 1 0 0 0 0 0
................................................AGTCTCGAATTGCATTATGGCC.................................................................................................. 22 2 1 1.00 1 1 0 0 0 0 0
..................................................TCTCGAATTGCATTCTGGCCGT................................................................................................ 22 2 1 1.00 1 0 1 0 0 0 0
.....................................................CGAATTGCAATATGGCCGATGA............................................................................................. 22 1 1 1.00 1 0 1 0 0 0 0
....................................................ACGAATTGCATTATGGCCGATGA............................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0
................................................TTTCTCGAATTGCATTATGGCCGA................................................................................................ 24 1 1 1.00 1 1 0 0 0 0 0
.................................................TTCTCGAATTGCATTATGGC................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
............................................................................................ATCAGCTGGAATGCCATTCGGG...................................................... 22 1 1 1.00 1 0 0 0 0 0 1
...................................................CTCGAATTGCATTATGGCCGATT.............................................................................................. 23 1 1 1.00 1 1 0 0 0 0 0
..................................................TCGCGAATGGCATGATGGCCGA................................................................................................ 22 3 1 1.00 1 0 1 0 0 0 0
.................................................TTCTCGAATTGGATTATGGCCGA................................................................................................ 23 2 1 1.00 1 1 0 0 0 0 0
.................................................ATCTCGAATTGCATTATGGTCGA................................................................................................ 23 2 1 1.00 1 0 1 0 0 0 0
..................................................TCTCGAGTGGCATTATGGCCG................................................................................................. 21 2 1 1.00 1 0 1 0 0 0 0
..................................................TCTCGAATGGAATTATGGCCGA................................................................................................ 22 2 1 1.00 1 0 1 0 0 0 0
..................................................TCTCGACTTGCATTCTGGCCGA................................................................................................ 22 2 1 1.00 1 0 1 0 0 0 0
............................................................................................ATCAGTTGGAATCCCATTCGGG...................................................... 22 1 1 1.00 1 0 0 0 1 0 0
............................................................................................ATTAGTTGGAATGCCATTCGGT...................................................... 22 2 1 1.00 1 0 0 0 1 0 0
..................................................TCTCGAATTGCATTGTGGCCGT................................................................................................ 22 2 1 1.00 1 0 1 0 0 0 0
..................................................TCTCGGAGTGCATTATGGGCGA................................................................................................ 22 3 1 1.00 1 0 0 1 0 0 0
..................................................TCGCGAATGGCATGATGGCCG................................................................................................. 21 3 1 1.00 1 0 1 0 0 0 0
..................................................TCTCGAAGTGAATTATGGCCGAA............................................................................................... 23 3 1 1.00 1 0 1 0 0 0 0
..................................................TCTCGAATTGCATTATGCCCG................................................................................................. 21 1 1 1.00 1 0 0 1 0 0 0
..................................................TCTCGAATCGCATTATGGCCGC................................................................................................ 22 2 1 1.00 1 0 1 0 0 0 0
..................................................TCTCGATTTGCATTATGGC................................................................................................... 19 1 1 1.00 1 0 1 0 0 0 0
..................................................TCTCGAATTGCATTAGGGCCGC................................................................................................ 22 2 1 1.00 1 0 1 0 0 0 0
............................................................................................ATCAGTTGGGATGCCATTCGGG...................................................... 22 1 1 1.00 1 0 0 0 0 0 1
..................................................TCACGAATTGCATTATGGCCG................................................................................................. 21 1 1 1.00 1 0 1 0 0 0 0
..................................................TCTCGAATTGCGTCATGGCCGA................................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
............................................................................................ATCAGTTGGACTGCCATTCGGGC..................................................... 23 2 1 1.00 1 0 1 0 0 0 0
..................................................TCTCGAACTGCATTATGGACGA................................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
.................................................CTCTCGAATTGCATTATGGCCTA................................................................................................ 23 1 1 1.00 1 0 0 1 0 0 0
..................................................TCGCGAATTGCATTATGGCCGT................................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
...............................................ACTTCTCGAATTGCATTATGGCCG................................................................................................. 24 3 1 1.00 1 1 0 0 0 0 0
..................................................TCTCGAATTGAATTACGGCCGA................................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
..................................................TCTCGAATTGCCTTATTGCCGC................................................................................................ 22 3 1 1.00 1 0 0 1 0 0 0
..................................................TCGCGAAGTGCATTATTGCCGA................................................................................................ 22 3 1 1.00 1 0 1 0 0 0 0
...............................................................................................ACTTGGAATGACATTCGGGTCA................................................... 22 2 1 1.00 1 0 0 1 0 0 0
..................................................TGTCGATTTGCATTATGGCCGA................................................................................................ 22 2 1 1.00 1 0 1 0 0 0 0
..............................................................................................TAGTTGGAATGCCATTCGGGTC.................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.....................................................CGAATTGCATTATGGACGA................................................................................................ 19 1 1 1.00 1 0 0 1 0 0 0
............................................................................................ATCAGTTAGAATGCCATTCG........................................................ 20 1 1 1.00 1 0 0 1 0 0 0
..................................................TCGCGAATTGCATTATGGGCGT................................................................................................ 22 3 1 1.00 1 0 0 1 0 0 0
..................................................TCTAGAATTGCATTATCGCCG................................................................................................. 21 2 1 1.00 1 0 1 0 0 0 0
.............................................................................................TCAGTTGGAATGACATTCGGGT..................................................... 22 1 1 1.00 1 0 0 0 0 1 0
..................................................TCTCGAATTGCATTATGGCATA................................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
.....................................................CGAATTGCATTATGGCAGATGAC............................................................................................ 23 1 1 1.00 1 0 1 0 0 0 0
..................................................TCTAGAATTGCATTATGGCC.................................................................................................. 20 1 1 1.00 1 0 0 1 0 0 0
..................................................TCCCGAATTGCATTATGGCCTA................................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
.........................................................................................ATCATCAGTTGGAACGCCT............................................................ 19 2 1 1.00 1 0 0 0 1 0 0
...............................................................................................AGTTGGACTGCCGTTCGGGTCC................................................... 22 3 1 1.00 1 0 1 0 0 0 0
..................................................TCTCGGATTGCATTATGGCCGT................................................................................................ 22 2 1 1.00 1 0 1 0 0 0 0
............................................................................................ATCAGGTGGAATGCCATTCGG....................................................... 21 1 1 1.00 1 0 1 0 0 0 0
..................................................CCTGGAATTGCGTTATGGCCGA................................................................................................ 22 3 1 1.00 1 0 1 0 0 0 0
..................................................TCTCGAATTACATTATGGCCGG................................................................................................ 22 2 1 1.00 1 0 1 0 0 0 0
..................................................TCTCGAATTGCATGAGGGACG................................................................................................. 21 3 1 1.00 1 0 1 0 0 0 0
..................................................TCGCGAATTGCATTATGACCGA................................................................................................ 22 2 1 1.00 1 0 1 0 0 0 0
...............................................................................................AGTTGGAATGCCATTCGGGTCAA.................................................. 23 0 1 1.00 1 0 0 1 0 0 0
...............................................................................................AGTTGGCATGCCATTCGGGTCT................................................... 22 2 1 1.00 1 0 0 1 0 0 0
..................................................TCTCGAATTGCATTATGGACG................................................................................................. 21 1 1 1.00 1 0 0 0 1 0 0
..................................................TCTCGAATTGCGTTATGTCCGG................................................................................................ 22 3 1 1.00 1 0 1 0 0 0 0
.................................................CCCTCGAATTGCATTATGGCCGA................................................................................................ 23 1 1 1.00 1 0 1 0 0 0 0
............................................................................................ATCAGTTGGAATTCCATTCGTG...................................................... 22 2 1 1.00 1 0 0 1 0 0 0
...............................................................................................AATTGGAATGCCATTCGGGTC.................................................... 21 1 1 1.00 1 0 0 0 0 1 0
..................................................TCGCGAATTGAATTATGGCCGA................................................................................................ 22 2 1 1.00 1 0 1 0 0 0 0
..................................................TCTCGAATTGCATTATGGCCGGG............................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
..................................................TCTCGAATTGCATTATGGACGG................................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
............................................................................................ATCAGTGGGAATGCCATCCGG....................................................... 21 2 1 1.00 1 0 1 0 0 0 0
...............................................................................................AGGTGGAATGCCATTCGGGTC.................................................... 21 1 1 1.00 1 0 0 0 0 0 1
..................................................TCTCGAATTACATTATTGCCGA................................................................................................ 22 2 1 1.00 1 0 0 0 1 0 0
..................................................TCTCGAATTGCATGATGGCCGA................................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
.............................................................................................TCGGTTGGAATGCCATTCGGGTC.................................................... 23 1 1 1.00 1 1 0 0 0 0 0
................................................CCTCTCGAATTGCATTATGGCCGA................................................................................................ 24 1 1 1.00 1 1 0 0 0 0 0
.................................................CTCTCGAATTGCATTATGTCCGA................................................................................................ 23 1 1 1.00 1 0 0 1 0 0 0
..................................................TCACGAATTGCATTATGGCCGA................................................................................................ 22 1 1 1.00 1 0 0 0 1 0 0
............................................................................................ATCAGGGCGAATGCCATTCGGG...................................................... 22 3 1 1.00 1 0 0 1 0 0 0
...................................................CGCGAATTGCATTATGGCCGA................................................................................................ 21 1 1 1.00 1 0 0 0 0 1 0
..................................................TCTCGAATTGCATTATGGCCGTA............................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0
..................................................TCTCGAATTGCATTCTGGCCT................................................................................................. 21 2 1 1.00 1 0 0 1 0 0 0
............................................................................................ATAAGTTGGAATGCCATTCGGG...................................................... 22 1 1 1.00 1 0 0 0 0 1 0
..................................................TCTAGAATTGAATTATGGCCGA................................................................................................ 22 2 1 1.00 1 0 1 0 0 0 0
..................................................TCTCGAATTGCATTATGGCA.................................................................................................. 20 1 1 1.00 1 0 0 1 0 0 0
...................................................CTCGAATTGCATTATGGTCGA................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0
..................................................TCTCGAATTGCCTTATAGCCGC................................................................................................ 22 3 1 1.00 1 0 1 0 0 0 0
..................................................TCTCGAATTGCATTATTG.................................................................................................... 18 1 1 1.00 1 0 0 1 0 0 0
..................................................TCTCGAATTTCATTATGGCC.................................................................................................. 20 1 1 1.00 1 0 0 1 0 0 0
.....................................................CTAATTGCATTATGGCCGATGA............................................................................................. 22 1 1 1.00 1 0 0 0 0 1 0
..................................................TCTCGAATTGCCTTATAGCCGA................................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
..................................................TCTCGAATTGAATTATGACCGA................................................................................................ 22 2 1 1.00 1 0 1 0 0 0 0
..................................................TCTCGAATTGCATCATTTCCGA................................................................................................ 22 3 1 1.00 1 0 0 1 0 0 0
..................................................TCACGAATTGCATTATGGCCGC................................................................................................ 22 2 1 1.00 1 0 1 0 0 0 0
..................................................TCTCGACTTGCATTATGGCAGA................................................................................................ 22 2 1 1.00 1 0 0 1 0 0 0
..................................................TCTCGACTTGCATTATGCCCGC................................................................................................ 22 3 1 1.00 1 0 1 0 0 0 0
..................................................TCTCGGATTGGATTATGGCCGA................................................................................................ 22 2 1 1.00 1 0 1 0 0 0 0
..................................................TCTTGAATTGCATTATGACCGAC............................................................................................... 23 3 1 1.00 1 0 0 1 0 0 0
..................................................TCTGGAATTGCATTATGGCCGA................................................................................................ 22 1 1 1.00 1 0 0 1 0 0 0
..................................................TCTAGAATTGCATTATGGCCGT................................................................................................ 22 2 1 1.00 1 0 1 0 0 0 0
.............................................CTGTCTCTCGAATTGCATTATGGCCGA................................................................................................ 27 2 1 1.00 1 1 0 0 0 0 0

Anti-sense strand reads

TTTCAACAACCGCTTGAAAGTTACCGAGTAAATTGACCGATTAACGGAAGAGAGCTTAACGTAATACCGGCTACTGTGTTAAGACGTTTTAGTAGTCAACCTTACGGTAAGCCCAGTTCCGTAAATGCTTAGCGGTTGCTCGTCGTTTAAGCTATAGTCAAGACGTTT

************************************....(((.((((((..(((((((.(((((..(((.(((((...............))))).)))..))))).)))))))..)))))).)))......*********************************** 		Read size # Mismatch Hit Count Total Norm Total M046

female body

 V110

male body		 V056

head
....................................................................................CGTTATAGTAGTCTACCTG................................................................. 19 3 20 1.05 21 21 0 0
...........................................................................................................................................TCGTTGTTGAAGCTATAGTGAA....... 22 3 3 0.67 2 0 2 0
............................................................GTAATAACAGCTACTGTGT......................................................................................... 19 2 2 0.50 1 0 0 1
............................................................................................................................................CGTTGTTGAAGCTATAGTGAA....... 21 3 6 0.33 2 0 2 0
...........................................................................................................................................TCGTTGTTGAAGCTATAGTGA........ 21 3 9 0.11 1 0 1 0
...................................................................................ACGTTATAGTAGTCTACCTG................................................................. 20 3 20 0.10 2 2 0 0
..................................................................................TACGTTATAGTAGTCTACCT.................................................................. 20 3 20 0.10 2 2 0 0
.........................................................................................................GGTAGGCCCAGATCAGTA............................................. 18 3 12 0.08 1 0 1 0
............................................CGGAAGCGCGCTGAACGTA......................................................................................................... 19 3 13 0.08 1 1 0 0
...................................................................................ACGTTATAGTAGTCTACCT.................................................................. 19 2 15 0.07 1 1 0 0
....................................................................................CGTTATAGTAGTCTACCT.................................................................. 18 2 15 0.07 1 1 0 0
............................................CGGAAGAACGCTGAACGTA......................................................................................................... 19 3 20 0.05 1 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droMoj3 scaffold_6496:17707852-17708019 - dmo_22 confident AAA------GTTGTTGG--CGAACTTTCAATGGCTCATTTAACTGGCTAATTGCCTTCTCTCGAATTGCATTATGGCCGATGACACAATTCTGCAAAA-TCATCAGTTGGAATGCCATTCGGGTCAAGGCATTTACGAATCGCCAACGAGCAGCAAATTCGA-TATCAGTT------------CTGCAAA
droVir3 scaffold_12875:9403383-9403534 + dvi-mir-986 Known_mirbase AAA------GTGTT-------T-----TAATGGTTCACTTAAATGGCTAATTGTCTTCTCTCGAATAGCATTATGGCTGATGACAATT--C-TGGAATAACATCAGTTGAAATGCCATTCGGGTTAAGGCACTTGAGAAATGGCAGCGAGCA-----TTTGAGTACCAGAC------------CATATAA
droGri2 scaffold_15245:2671300-2671409 + dgr_11 confident AAA------GTTT---------------------------GAATGGCTTATTGCCTTTTCTCGAATTGCATTGTGACTGATGAAAATT----TAGAAATTCATCAGTTAAAATGCCATTCGAGTTAAGGCACTTATGCATTAACAAC-------------------------------------------
droWil2 scf2_1100000004513:3161026-3161143 - dwi_121 confident AAA------GTGAA-------C-----AGTTCG-ATGACTT-------AAATGCCCAATCTCGAATAGCGTTGTAACTGATGA--TTGTGA-TATGAGAGAGTCAGCCACTATGCTATACGAGGTGGGGCATTTGTGGGTAAACAAC-------------------------------------------
droTak1 scf7180000415627:215810-215969 + ATA------GCTCTCGGCAAAACAAGGAGACGATACACCCG-------AAATTACCCATCTCGAATAGCGTTGTGACTGAGGTAACTGCGCATCGAAACGACTCAGCGGCAACGCTATTTCAGATAGGTCATTT-TGGGCCAGC---GACTTTAC-------------GACCGGAAAATTGTTCTGCTAA
dm3 chr2R:4332467-4332580 + dme-mir-986 Known_mirbase AGC------GTT-------AGCCACGCAGAGGACACACCTG-------AAATTACCCATCTCGAATAGCGTTGTGACTGAGGTAACTGCGCATCGAATCTACTCAGCGGCGAGGCTATTCAAGTAAGGTTATTT--------------------------------------------------------
droSim2 2r:5149918-5149922 + AAT------GT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSec2 scaffold_1:1974067-1974182 + dse_15 confident GTG------GTTTT-----AGCCACGCAGAGGACACACCTG-------AAATTACCCATCTCGAATAGCGTTGTGACTGAGGTAACTGCGCATCGAATCTACTCAGCGGCGAGGCTATTCCAGTAAGGTTGTTT--------------------------------------------------------
droYak3 2L:16988541-16988656 + dya_15 confident GTT------GTTTT-----AGAAACGCAGAGGACACACCTA-------AAATTACCCATCTCGAATAGCGTTGTGACTGAGGTAACTGCGCATCGTATCTACTCAGCGGCGAAGCTATTCCAGTAAGGTTATTT--------------------------------------------------------
droEre2 scaffold_4929:18305696-18305838 - der_115 confident AAAGTCGTACTTTT-----AG------ATACGAGATACCTA-------AGATTACCCATCTCGAATAGCGTTGTGACTGAGGTAACTGCGCATCGAATCTACTCAGCGGCAAGGCTATTCCAGTAAGGTTATTT-TGGGCCAGC---GACTCAAC-------------GAC------------CGGAAAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
AAA------GTTGTTGG--CGAACTTTCAATGGCTCATTTAACTGGCTAATTGCCTTCTCTCGAATTGCATTATGGCCGATGACACAATTCTGCAAAA-TCATCAGTTGGAATGCCATTCGGGTCAAGGCATTTACGAATCGCCAACGAGCAGCAAATTCGA-TATCAGTT------------CTGCAAASizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
..........................................................TCTCGAATTGCATTATGGCCGA..............................................................................................................22111060.001106056355515972349592832
..........................................................TCTCGAATTGCATTATGGCCG...............................................................................................................2111951.001951937233650319154
...........................................................CTCGAATTGCATTATGGCCGA..............................................................................................................211494.0049448800240
........................................................................................................AGTTGGAATGCCATTCGGGTCA................................................................221346.003464216448018146
.....................................................................................................ATCAGTTGGAATGCCATTCGGG...................................................................221318.00318409444921155
.....................................................................................................ATCAGTTGGAATGCCATTCGG....................................................................211215.0021522322321135
..........................................................TCTCGAATTGCATTATGGCC................................................................................................................201141.0014157116302611
..........................................................TCTCGAATTGCATTATGGCCGC..............................................................................................................221104.0010440465022
...........................................................CTCGAATTGCATTATGGCCG...............................................................................................................20181.00818000100
..........................................................TCTCGAATTGCATTATGGCCGAT.............................................................................................................23179.007949071715
........................................................................................................AGTTGGAATGCCATTCGGGTC.................................................................21163.006395582511
.........................................................CTCTCGAATTGCATTATGGCCGA..............................................................................................................23159.0059111123230
..........................................................TCTCGAATTGCATTATGGCCGT..............................................................................................................22151.005112062922
............................................................TCGAATTGCATTATGGCCGA..............................................................................................................20141.00412524622
.............................................................CGAATTGCATTATGGCCGATGA...........................................................................................................22137.00372722213
..........................................................TCTCGAATTGCATTATGGC.................................................................................................................19133.00332102613
................................................................................TGACACAATTCTGCAAAA-TCATC......................................................................................23128.00284010230
..........................................................TCTCGAATTGCATTATGGCCGAA.............................................................................................................23127.00271701603
.....................................................................................................ATCAGTTGGAATGCCATTCG.....................................................................20126.00266034013
.....................................................................................................ATCAGTTGGAATGCCATTCGGGT..................................................................23121.00214003014
..........................................................TCTCGAATTGCATTATGGCCGG..............................................................................................................22119.00190061210
..........................................................TCTCGAATTGCATTATGGCCT...............................................................................................................21112.0012309000
............................................................TCGAATTGCATTATGGCCG...............................................................................................................19111.0011702200
..........................................................TCTCGAATTGCATTATGGCCGATG............................................................................................................24110.0010501202
..............................................................GAATTGCATTATGGCCGA..............................................................................................................1819.009500310
......................................................................................................TCAGTTGGAATGCCATTCGGG...................................................................2118.008302111
........................................................................................................AGTTGGAATGCCATTCGGGT..................................................................2018.008202103
.....................................................................................................ATCAGTTGGAATGCCATTCGGGA..................................................................2317.007000106
.........................................................CTCTCGAATTGCATTATGGCCG...............................................................................................................2217.007402100
...........................................................CTCGAATTGCATTATGGCCGAT.............................................................................................................2217.007700000
.............................................................CGAATTGCATTATGGCCGATG............................................................................................................2117.007401200
.............................................................CGAATTGCATTATGGCCGA..............................................................................................................1917.007700000
...........................................................CTCGAATTGCATTATGGCC................................................................................................................1916.006600000
.....................................................................................................ATCAGTTGGAATGCCATTCGGT...................................................................2216.006003003
.........................................................................................................GTTGGAATGCCATTCGGGTCA................................................................2116.006600000
......................................................................................................TCAGTTGGAATGCCATTCGGGT..................................................................2215.005301010
..........................................................TCTCGAATTGCATTATGGCCGATT............................................................................................................2415.005401000
..........................................................TCTCGAATTGCATTATGGCCGAG.............................................................................................................2315.005500000
........................................................................................................AGTTGGAATGCCATTCGGG...................................................................1914.004101200
..........................................................TCTCGAATTGCATTATGG..................................................................................................................1814.004101110
..........................................................TCTCGAATTGCATTATGGCCGAC.............................................................................................................2314.004400000
.....................................................................................................ATCAGTTGGAATGCCATTCGGC...................................................................2214.004100021
.........................................................CTCTCGAATTGCATTATGGCCGC..............................................................................................................2313.003001200
..........................................................TCTCGAATTGCATTATGGCCGAAA............................................................................................................2413.003300000
..........................................................................................................TTGGAATGCCATTCGGGTCA................................................................2013.003200001
......................................................................................................TCAGTTGGAATGCCATTCGGGTC.................................................................2313.003000012
.....................................................................................................ATCAGTTGGAATGCCATTCGT....................................................................2113.003100101
..........................................................TCTCGAATTGCATTATGGCCGTC.............................................................................................................2313.003100101
.....................................................................................................ATCAGTTGGAATGCCATTCGGA...................................................................2212.002000002
.............................................................CGAATTGCATTATGGCCGATGAA..........................................................................................................2312.002001001
.................................................ATTGCCTTCTCTCGAATTGCA........................................................................................................................2112.002000101
...........................................................CTCGAATTGCATTATGGCCGAA.............................................................................................................2212.002200000
........................................................................................................AGTTGGAATGCCATTCGGGTCC................................................................2212.002002000
..........................................................TCTCGAATTGCATTATGGCCA...............................................................................................................2112.002101000
......................................................................................................TCAGTTGGAATGCCATTCGGGTCA................................................................2412.002100010
..........................................................TCTCGAATTGCATTATGGCCGAAT............................................................................................................2412.002200000
......................................................................................................TCAGTTGGAATGCCATTCGG....................................................................2012.002200000
..............................................................GAATTGCATTATGGCCGATGA...........................................................................................................2112.002200000
..........................................................TCTCGAATTGCATTATGGCCC...............................................................................................................2112.002000020
..........................................................TCTCGAATTGCATTATGGCCTC..............................................................................................................2212.002000200
.....................................................................................................ATCAGTTGGAATGCCATTCGGGAT.................................................................2412.002000200
.....................................................................................CAATTCTGCAAAA-TCATC......................................................................................1811.001000010
.........................................................................................................GTTGGAATGCCATTCGGGT..................................................................1911.001100000
...........................................................CTCGAATTGCATTATGGCCGATT............................................................................................................2311.001100000
........................................................................................................AGTTGGAATGCCATTCGGGTCAA...............................................................2311.001001000
..........................................................TCTCGAATTGCATTATGGCCGGG.............................................................................................................2311.001100000
..........................................................TCTCGAATTGCATTATGGCCGTA.............................................................................................................2311.001000100
..........................................................TCTCGAATTGCATTATGGCA................................................................................................................2011.001001000
droVir3
AAA------GTGTT-------T-----TAATGGTTCACTTAAATGGCTAATTGTCTTCTCTCGAATAGCATTATGGCTGATGACAATT--C-TGGAATAACATCAGTTGAAATGCCATTCGGGTTAAGGCACTTGAGAAATGGCAGCGAGCA-----TTTGAGTACCAGAC------------CATATAASizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
..........................................................TCTCGAATAGCATTATGGCTGA..............................................................................................................22115538.00155382774133610631112047262181100024569050151222621673112174117317942536118721201101387002000125314003991238655815970114000111831500000
..........................................................TCTCGAATAGCATTATGGCTG...............................................................................................................2111051.0010511041263969018220900000000002020001111563433062000014300000000000100000124517500200001200000000
..........................................................TCTCGAATAGCATTATGGCTGG..............................................................................................................221391.003912609730060000000000010000000000010603000002000000000000010001116100100000000000000
..........................................................TCTCGAATAGCATTATGGCTGAT.............................................................................................................231364.0036412949103300050000002100308000005102358062000005200000000000000010001191000000000000000000
...........................................................CTCGAATAGCATTATGGCTGA..............................................................................................................211307.00307012940000000000000100000000000101206000000000000000000000000000100000000000000000
..........................................................TCTCGAATAGCATTATGGCTGATG............................................................................................................241249.00249336530230208000000000020400010414174001800100180000000011000000000091000000000200000000
..........................................................TCTCGAATAGCATTATGGC.................................................................................................................191230.0023070925140000000000000000000000000000010000000110000011123214441211000000012402000000
........................................................................................................AGTTGAAATGCCATTCGGGTTA................................................................221212.002122375580900010000211074104500000712516040000030000021010100000006221000000000100200000
..........................................................TCTCGAATAGCATTATGGCT................................................................................................................201175.00175695300802060000000000200000010428018000001300000000000000000011172400000000000000000
..........................................................TCTCGAATAGCATTATGGCTGC..............................................................................................................221107.001070000027000000000001002000000000100360000129000000000000000000027100000000000000000
................................................................................TGACAATT--C-TGGAATAACATC......................................................................................21199.00990010390000000000000000000000000000000000000000024372206030016130000000000000010000
........................................................................................................AGTTGAAATGCCATTCGGGTT.................................................................21158.0058321411010000000000001010100000023000000001000000022030000000630200000000000000000
..........................................................TCTCGAATAGCATTATGGCTGAA.............................................................................................................23153.0053031600400000000000010002000002501007000000000000000000000000001100000000000000001
..........................................................TCTCGAATAGCATTATGGCTGT..............................................................................................................22152.005202610100040000000000000000000000070000050010000000000002111013700000000000000000
.........................................................CTCTCGAATAGCATTATGGCTGA..............................................................................................................23140.004000100050001000000000000000000221908000001000000000000000000001000000000000000000
...........................................................CTCGAATAGCATTATGGCTG...............................................................................................................20137.003700370000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................TCGAATAGCATTATGGCTGA..............................................................................................................20137.003701170000001000000000000100000002207000002000000000001000000003000000000000000000
..........................................................TCTCGAATAGCATTATGGCTGGG.............................................................................................................23131.0031131800000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................TCTCGAATAGCATTATGG..................................................................................................................18125.00251220040000000000000000000000300105000001000000000000000000001500000000000000000
......................................................................................................TCAGTTGAAATGCCATTCGGG...................................................................21124.00240080010000000000010000100000012301000002000000000000000000001300000000000000000
..........................................................TCTCGAATAGCATTATGGCTGATT............................................................................................................24123.00231130010003000000000020000000000204000004000000000000000000000100000000100000000
..............................................................GAATAGCATTATGGCTGA..............................................................................................................18120.002000100010000000000110000000000010303000000000000000000000000000000000000000000000
......................................................................................................TCAGTTGAAATGCCATTCGGGT..................................................................22116.00161250010000000000000000000000000101000001000000000000000000002200000000000000000
.........................................................................................................GTTGAAATGCCATTCGGGTTA................................................................21116.00160151010000000000000011000000100200000000000000000001000000000200000000000000000
......................................................................................................TCAGTTGAAATGCCATTCGGGTTA................................................................24115.00150100010000000000000001100000112302000000000000000000000000001100000000000000000
..........................................................TCTCGAATAGCATTATGGCTGATGT...........................................................................................................25113.00130011010000000000000000100000001400000004000000000000000000000000000000000000000
......................................................................................................TCAGTTGAAATGCCATTCGGGTT.................................................................23112.00120052000000000000010000000000000100000000000000001000100000100000000000000000000
.............................................................CGAATAGCATTATGGCTGA..............................................................................................................19111.00110070010000000000000000000000110100000000000000000000000000000000000000000000000
..........................................................TCTCGAATAGCATTATGGCC................................................................................................................20110.00103610000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................ATCAGTTGAAATGCCATTCGGG...................................................................2219.0090022000001000000000000000000011200000000000000000000000000000000000000000000000
......................................................................................................TCAGTTGAAATGCCATTCGG....................................................................2018.0080030010000000000000000000000010100000000000000000000000000001100000000000000000
..........................................................TCTCGAATAGCATTATGGCTGAC.............................................................................................................2317.0070100000000000000000000000000001002000001000000000000000000011000000000000000000
..........................................................TCTCGAATAGCATTATGGCTGAAA............................................................................................................2416.0060030000000000000000000100000001100000000000000000000000000000000000000000000000
..........................................................TCTCGAATAGCATTATGGCTC...............................................................................................................2116.0062020000000000000000000100000000000000000000000000000000000000100000000000000000
........................................................................................................AGTTGAAATGCCATTCGGGT..................................................................2016.0060120000000000000000000000000101000000000000000000000000000000100000000000000000
...........................................................CTCGAATAGCATTATGGCT................................................................................................................1916.0060060000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................CTCGAATAGCATTATGGCTGATG............................................................................................................2316.0060060000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................TCTCGAATAGCATTATGGCTGATC............................................................................................................2415.0050120000000000000000000000000001000000000000000000000000000000000000000100000000
..........................................................TCTCGAATAGCATTATGGCTT...............................................................................................................2115.0050210000000000000000000000000000002000000000000000000000000000000000000000000000
.....................................................................................................ATCAGTTGAAATGCCATTCGGGT..................................................................2315.0050120000000000000000000100000000000000000000000000000000000000010000000000000000
..........................................................TCTCGAATAGCATTATGGCTGAG.............................................................................................................2315.0050030010000000000000000000000000100000000000000000000000000000000000000000000000
.....................................................................................................ATCAGTTGAAATGCCATTCGG....................................................................2114.0040000000000000000000000000000010000000000000000000000000000001100100000000000000
........................................................................................................AGTTGAAATGCCATTCGGG...................................................................1914.0040010000000000000000001000000000000000001000000000000000000001000000000000000000
..........................................................TCTCGAATAGCATTATGGCTTC..............................................................................................................2213.0030000000000000000000010000000000001000000000000000000000000001000000000000000000
.............................................................CGAATAGCATTATGGCTGATG............................................................................................................2113.0030030000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................GTTGAAATGCCATTCGGGTT.................................................................2013.0030030000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................TCGAATAGCATTATGGCTG...............................................................................................................1913.0031010000000000000000000000000000000000000000000000000000000001000000000000000000
.....................................................................................................ATCAGTTGAAATGCCATTCG.....................................................................2012.0020010000000000000000000000000000000000000000000000000000000000100000000000000000
............................................................TCGAATAGCATTATGGCTGATG............................................................................................................2212.0020000000001000000000000000000000001000000000000000000000000000000000000000000000
..........................................................TCTCGAATAGCATTATGGCTGATTT...........................................................................................................2512.0020000000000000000000010000000000100000000000000000000000000000000000000000000000
........................................................................................................AGTTGAAATGCCATTCGGGTTC................................................................2212.0020000000000000010000000000000000000000000000000001000000000000000000000000000000
..........................................................TCTCGAATAGCATTATGGCTTT..............................................................................................................2212.0020000000000000000000000000000000100000000000000000000000000001000000000000000000
.................................................................................GACAATT--C-TGGAATAACATC......................................................................................2012.0020011000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................TCTCGAATAGCATTATGGCTGTC.............................................................................................................2312.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................TCTCGAATAGCATTATGGCTTG..............................................................................................................2212.0020000000000000000000000000000000001000000000000000000000000001000000000000000000
.......................................................................................................CAGTTGAAATGCCATTCGGG...................................................................2012.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................CTCGAATAGCATTATGGCTGAT.............................................................................................................2212.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................TCTCGAATAGCATTATGGCTGGC.............................................................................................................2311.0010100000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................TCAGTTGAAATGCCATTCGGGTTATA..............................................................2611.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
......................................................................................................TCAGTTGAAATGCCATTCGGGTTAA...............................................................2511.0010000000000000000000000000000000100000000000000000000000000000000000000000000000
.........................................................................................................GTTGAAATGCCATTCGGGTTC................................................................2111.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................TCTCGAATAGCATTATGGA.................................................................................................................1911.0011000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................TCGAATAGCATTATGGCTGAT.............................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000001000000000000000000
........................................................TCTCTCGAATAGCATTATGGCTGA..............................................................................................................2411.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................CGAATAGCATTATGGCTGATGA...........................................................................................................2211.0010000000000000000000000000000001000000000000000000000000000000000000000000000000
.............................................................CGAATAGCATTATGGCTG...............................................................................................................1811.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................TCTCGAATAGCATTATGGCTGATGTT..........................................................................................................2611.0010000000001000000000000000000000000000000000000000000000000000000000000000000000
.......................................................TTCTCTCGAATAGCATTATGGCTGA..............................................................................................................2511.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................TCTCGAATAGCATTATGGCTGAAT............................................................................................................2411.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................GAATAGCATTATGGCTGAT.............................................................................................................1911.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................TCTCGAATAGCATTATGGCTGCA.............................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000001000000000000000000
..........................................................TCTCGAATAGCATTATGGCTGATTC...........................................................................................................2511.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................TCAGTTGAAATGCCATTCGGGTTT................................................................2411.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................AGGCACTTGAGAAATGGCAGCGA.........................................2311.0010000000000000000000000000000000000000000000000000000000000000100000000000000000
..........................................................TCTCGAATAGCATTATGGCTAC..............................................................................................................2211.0010000000000000000000000000000000001000000000000000000000000000000000000000000000
.........................................................CTCTCGAATAGCATTATGGCTGATG............................................................................................................2511.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................CTCGAATAGCATTATGGC.................................................................................................................1811.0010010000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................TCTCGAATAGCATTATGGCTAG..............................................................................................................2211.0010000000000000000000000000000000000000001000000000000000000000000000000000000000
..........................................................TCTCGAATAGCATTATGGCTGGA.............................................................................................................2311.0010000000000000000000001000000000000000000000000000000000000000000000000000000000
........................................................................................................AGTTGAAATGCCATTCGGGTTT................................................................2211.0010000000000000000000000000000100000000000000000000000000000000000000000000000000
droGri2
AAA------GTTT---------------------------GAATGGCTTATTGCCTTTTCTCGAATTGCATTGTGACTGATGAAAATT----TAGAAATTCATCAGTTAAAATGCCATTCGAGTTAAGGCACTTATGCATTAACAAC-------------------------------------------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
..........................................................TCTCGAATTGCATTGTGACTGA..............................................................................................................221267.0026717988
..........................................................TCTCGAATTGCATTGTGACTG...............................................................................................................21188.00884741
..........................................................TCTCGAATTGCATTGTGACT................................................................................................................20137.00372611
..........................................................TCTCGAATTGCATTGTGACTGAT.............................................................................................................23123.0023203
...........................................................CTCGAATTGCATTGTGACTGA..............................................................................................................21116.0016160
............................................................TCGAATTGCATTGTGACTGAT.............................................................................................................2115.00541
...........................................................CTCGAATTGCATTGTGACTG...............................................................................................................2015.00550
..........................................................TCTCGAATTGCATTGTGA..................................................................................................................1815.00505
..........................................................TCTCGAATTGCATTGTGACTGAA.............................................................................................................2313.00321
...........................................................CTCGAATTGCATTGTGACT................................................................................................................1912.00220
..........................................................TCTCGAATTGCATTGTGACTGATG............................................................................................................2412.00202
............................................................TCGAATTGCATTGTGACTGA..............................................................................................................2012.00220
..........................................................TCTCGAATTGCATTGTGACTGAG.............................................................................................................2312.00220
.............................................................CGAATTGCATTGTGACTGATG............................................................................................................2111.00110
...........................................................CTCGAATTGCATTGTGACTGAT.............................................................................................................2211.00101
..........................................................TCTCGAATTGCATTGTGACTGG..............................................................................................................2211.00110
..........................................................TCTCGAATTGCATTGTGACTGATC............................................................................................................2411.00101
.............................................................CGAATTGCATTGTGACTGAT.............................................................................................................2011.00110
...............................................................AATTGCATTGTGACTGATGA...........................................................................................................2011.00110
........................................................................................................AGTTAAAATGCCATTCGAGTT.................................................................2111.00101
............................................................TCGAATTGCATTGTGACTG...............................................................................................................1911.00101
.........................................................................................................GTTAAAATGCCATTCGAGTTA................................................................2111.00110
........................................................................................................AGTTAAAATGCCATTCGAGTTA................................................................2211.00101
..........................................................TCTCGAATTGCATTGTGACTGATT............................................................................................................2411.00110
droWil2
AAA------GTGAA-------C-----AGTTCG-ATGACTT-------AAATGCCCAATCTCGAATAGCGTTGTAACTGATGA--TTGTGA-TATGAGAGAGTCAGCCACTATGCTATACGAGGTGGGGCATTTGTGGGTAAACAAC-------------------------------------------SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
..........................................................TCTCGAATAGCGTTGTAACTGA..............................................................................................................221121238.001212381083243869125356632129
..........................................................TCTCGAATAGCGTTGTAACTGG..............................................................................................................22114438.0014438144293024
..........................................................TCTCGAATAGCGTTGTAACTG...............................................................................................................21110155.00101554312170775713981981
..........................................................TCTCGAATAGCGTTGTAACT................................................................................................................2014197.004197345823011599295
..........................................................TCTCGAATAGCGTTGTAACTGAA.............................................................................................................2313808.0038083338972429356
..........................................................TCTCGAATAGCGTTGTAAC.................................................................................................................1911579.00157915627046
..........................................................TCTCGAATAGCGTTGTAACTGAT.............................................................................................................2311250.001250110059155026
..........................................................TCTCGAATAGCGTTGTAACTGAAA............................................................................................................241451.004511868321746
...........................................................CTCGAATAGCGTTGTAACTGA..............................................................................................................211329.0032948270074
............................................................TCGAATAGCGTTGTAACTGATG............................................................................................................221312.0031211816512998
............................................................TCGAATAGCGTTGTAACTGAT.............................................................................................................211182.0018212439964
..........................................................TCTCGAATAGCGTTGTAACTGAC.............................................................................................................231176.001761724000
..........................................................TCTCGAATAGCGTTGTAACTGT..............................................................................................................221172.0017215110416
............................................................TCGAATAGCGTTGTAACTGA..............................................................................................................201163.0016311725786
..........................................................TCTCGAATAGCGTTGTAACC................................................................................................................201147.001471460001
...........................................................CTCGAATAGCGTTGTAACTG...............................................................................................................201117.001178105013
................................................................................TGA--TTGTGA-TATGAGAGAGTC......................................................................................21183.00831723565
........................................................................................................AGCCACTATGCTATACGAGGTG................................................................22181.00813541041
..........................................................TCTCGAATAGCGTTGTAACTGC..............................................................................................................22164.0064581203
..........................................................TCTCGAATAGCGTTGTAA..................................................................................................................18161.00615153911
......................................................................................................TCAGCCACTATGCTATACGAGT..................................................................22154.0054362934
..........................................................TCTCGAATAGCGTTGTAACTGATT............................................................................................................24150.0050432014
..........................................................TCTCGAATAGCGTTGTAACG................................................................................................................20132.0032320000
......................................................................................................TCAGCCACTATGCTATACGAGG..................................................................22127.0027017064
..............................................................GAATAGCGTTGTAACTGA..............................................................................................................18123.0023156002
..........................................................TCTCGAATAGCGTTGTAACTGAG.............................................................................................................23122.0022182020
......................................................................................................TCAGCCACTATGCTATACGAG...................................................................21120.0020150113
..........................................................TCTCGAATAGCGTTGTAACTGATC............................................................................................................24119.0019151003
..........................................................TCTCGAATAGCGTTGTAACTA...............................................................................................................21119.001933157
............................................................TCGAATAGCGTTGTAACTGG..............................................................................................................20118.0018180000
...........................................................CTCGAATAGCGTTGTAACT................................................................................................................19117.0017115001
...........................................................CTCGAATAGCGTTGTAACTGAA.............................................................................................................22115.0015312000
..........................................................TCTCGAATAGCGTTGTAACTGATGA--.........................................................................................................25114.0014110120
........................................................................................................AGCCACTATGCTATACGAGGTGT...............................................................23114.001400275
.............................................................CGAATAGCGTTGTAACTGA..............................................................................................................19114.001459000
............................................................TCGAATAGCGTTGTAACTGATT............................................................................................................22114.001483021
..........................................................TCTCGAATAGCGTTGTAACTT...............................................................................................................21113.001361015
............................................................TCGAATAGCGTTGTAACTG...............................................................................................................19113.001306205
..........................................................TCTCGAATAGCGTTGTAACTGATG............................................................................................................24111.001150033
............................................................TCGAATAGCGTTGTAACT................................................................................................................18110.001054001
................................................................................TGA--TTGTGA-TATGAGAGAGT.......................................................................................20110.001011143
......................................................................................................TCAGCCACTATGCTATACGAGGT.................................................................2319.00903033
...........................................................CTCGAATAGCGTTGTAACTGAT.............................................................................................................2219.00909000
..........................................................TCTCGAATAGCGTTGTAACTC...............................................................................................................2119.00920313
...........................................................CTCGAATAGCGTTGTAACTGG..............................................................................................................2119.00990000
..........................................................TCTCGAATAGCGTTGTAACTGATA............................................................................................................2418.00851020
.......................................................................................................CAGCCACTATGCTATACGAGGT.................................................................2218.00800044
............................................................TCGAATAGCGTTGTAACTGATGA--.........................................................................................................2317.00730220
.............................................................CGAATAGCGTTGTAACTGAT.............................................................................................................2016.00615000
............................................................TCGAATAGCGTTGTAACTGAA.............................................................................................................2116.00660000
..........................................................TCTCGAATAGCGTTGTAACTGAAC............................................................................................................2416.00650010
.........................................................ATCTCGAATAGCGTTGTAACTGA..............................................................................................................2315.00512110
..........................................................TCTCGAATAGCGTTGTAACTGAAT............................................................................................................2414.00422000
........................................................................................................AGCCACTATGCTATACGAGGT.................................................................2114.00400040
................................................................................TGA--TTGTGA-TATGAGAGAGTCT.....................................................................................2214.00400220
..........................................................TCTCGAATAGCGTTGTAACTGACA............................................................................................................2414.00440000
..........................................................TCTCGAATAGCGTTGTAACA................................................................................................................2014.00430010
.............................................................CGAATAGCGTTGTAACTG...............................................................................................................1813.00303000
...........................................................CTCGAATAGCGTTGTAACTGAAA............................................................................................................2313.00303000
............................................................TCGAATAGCGTTGTAACTGATGT--.........................................................................................................2313.00320001
...........................................................CTCGAATAGCGTTGTAACTGT..............................................................................................................2113.00303000
............................................................TCGAATAGCGTTGTAACTGATGA--TTG......................................................................................................2613.00300021
.................................................................................GA--TTGTGA-TATGAGAGAGTC......................................................................................2012.00210001
..........................................................TCTCGAATAGCGTTGTAACTGTA.............................................................................................................2312.00210001
............................................................TCGAATAGCGTTGTAACTGATGA--T........................................................................................................2412.00202000
............................................................TCGAATAGCGTTGTAACTGAC.............................................................................................................2112.00220000
droTak1
ATA------GCTCTCGGCAAAACAAGGAGACGATACACCCG-------AAATTACCCATCTCGAATAGCGTTGTGACTGAGGTAACTGCGCATCGAAACGACTCAGCGGCAACGCTATTTCAGATAGGTCATTT-TGGGCCAGC---GACTTTAC-------------GACCGGAAAATTGTTCTGCTAASizeHit CountTotal NormTotal
No Reads
dm3
AGC------GTT-------AGCCACGCAGAGGACACACCTG-------AAATTACCCATCTCGAATAGCGTTGTGACTGAGGTAACTGCGCATCGAATCTACTCAGCGGCGAGGCTATTCAAGTAAGGTTATTT--------------------------------------------------------SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
..........................................................TCTCGAATAGCGTTGTGACTGA..............................................................................................................221312350.00312350000084134331700000202183252302182722276132791746913103018611444146300441436102886281982176323655542734100092111600000000000000000106123108716472794539135948214362116561103655229224320325115108191873516157801220580571138011023416649019151100016106033753196410113378904618000101022301259329101313531267123161639210728089684517153142700403789194311881695148764521556442123313811101973171672420776155642510184101733541308341282101182182154159001432000526382174908568316461240962129229210542681616432271511841134338427992314181424275110858520401203941803634809813764332191643399636729489484530128542050018902423253721842805508103717302388504711841465725296214476232116993679036423017918749977138185431948936001457189914619892201530122525452214713354
..........................................................TCTCGAATAGCGTTGTGACTG...............................................................................................................21172067.0072067000020000010200000105555756001010820142149763211635259210810771202336913529116699220800041610000000000000000010118102124220020192011513581023161720002524041273172029029726020165126000520000101011190112001414117610000010000023898802511941342511141841892617922935549000107955892744162653400394651491201001117212500139940120553961279371628141193332000001007973075751368873497530561118891945001555101972291174362509623658722891353102876204089002013471115237502178263732860922124438827762843914503151162023065964413124151470006832029943220107373204019282043592261386260751962111949289722865983055171
..........................................................TCTCGAATAGCGTTGTGACT................................................................................................................20124963.002496300000000010000000000612151301028521582711129331716002233018826171622440010200000000000000000012138514020100201421148201087520000601140041035020012241110228301183200003001002200010030111700000000000835770767135813523645614016836000103021058142280006105511003012418602012010041124797342153009111360000100081005936330201692212345444029165316008272739223356397206739541007913510326551313213971116331410881377482664021717150113414304686158187115060111597231586380611121100061917042580953173895901492216616854794250
..........................................................TCTCGAATAGCGTTGTGACTGAATC...........................................................................................................2517737.007737000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022305507000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................TCTCGAATAGCGTTGTGACTGAA.............................................................................................................2317615.00761500000000000000000000815510000000000142112800278503221191611810000000000000000000000023031100731001126100157001000000220300016002020200032128000000000001016600100010522230000020000016920252091022411612800000030274211831001731714200001638310000000010035291150232057722740000186700980230710016001113504148000139273859014241344100611471183284511142521100001696134724917251721113955731712018439001373672884640342983050108729351913286243600011
..........................................................TCTCGAATAGCGTTGTGACTGAG.............................................................................................................2313303.00330300000000000000000000521500003000000022390010815134317413600001217100000000000000000020102002100022300215004315000000101100100501031500045000100000200001400100030237000000000001132019531354501010120000002560142815000230463800000224030210000000075583761443204200000000125041082305001411401193000102232242511440132580015363292120276103701126708302018192120101225176518359450041361953950500426718502451212171326391700001
..........................................................TCTCGAATAGCGTTGTGACTGAAA............................................................................................................2413221.00322100000011100000000000830000000000001323141001362118046231200000000000000000000000010006130400000000020001030000001000000000000000000000000000000000035000000502212000000000006120410020000020000005123241000011590000034551000000000001168481954238172000012001001000001003070020000311620221010035737919323657517300000731009740321014253878005300756555440001121902012601016318500000
..........................................................TCTCGAATAGCGTTGTGACTGAT.............................................................................................................2313002.0030020000000000000000000010120000000000012130025206009351100000000000000000000000320202001100102000127005060000000101001000303020002119000000000000004001000504500000000000257901714145215211633300000432131470001208240103013130020000000001618810315222448100000013380021000051002110120250053000722513270831342500154030641123042554000087101296471717131365182045160352900116145524851128637401623437367101073600005
........................................................................................................AGCGGCGAGGCTATTCAAGTAA................................................................2212286.002286000000000000000000002120003000000000011001013011002100009000000000000000000010002903110121831202011062020046812923469914461021340730908040000100000000000000021032140010000012030102723019001619112020025000120515651000601900000033000000623332122630000100000003201525243143371324408427230138144617126160010920322183031495017171815311113139211002003144009431647193240874302442236221021321912134160
..........................................................TCTCGAATAGCGTTGTGA..................................................................................................................1811818.001818000000000000000000004512100453750001010000500100901100000000000000000000000011010000000000100110100110000000010000010200022000558002170000050000100000000010000000000051300910555375104533000001526261120050197000002200600000021071000000000000000050001052603101024204131000411582430136227014110455122236320200162182069121215166918211012142140020182717101452380131881955182800000
..........................................................TCTCGAATAGCGTTGTGACTGC..............................................................................................................2211713.0017130000000000000000000033220000000000000040024460333081302241000000000000000000000000010000000000000001020021000000000000011090200010134805000110000000000300000031613000000000212229017302000010210000072223000003100000050000000000001001010024000010003101521584021008015073101006118715169381900838103240192115000027333410216721337397204214523000251480001311720404321011400000
..........................................................TCTCGAATAGCGTTGTGACTATC.............................................................................................................2321691.00338200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008862496000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................TCTCGAATAGCGTTGTGACTGT..............................................................................................................2211647.001647000000000000000000001010000000000000207002190115036109010000000000000000000000011101002000010160001200321100000000000000400010205130180002000000000010000000012000000000001410802811540617180000001652810003029020004600100000000012172613002140000790001013133002000170220417320056171312061980160091941918131610000032837866713151001210519100002296218010305065118428473111185112800010
..........................................................TCTCGAATAGCGTTGTGACTGATC............................................................................................................2411423.00142300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000010000000000000000000000000100000000000000100000100002821125000000000000000000000000000000000000000101000000000001001000011000000001100000000100010000100000
...........................................................CTCGAATAGCGTTGTGACTGA..............................................................................................................2111052.0010520000000000000000000000120004191190102000005200110301000000220000000000000000000000000000001100010500360000020000100000101020103052000300000500000000000300100000000000269002421515111113181118000000621332000101200000110310000000002117106311311000000001200103111300120120151000012924053118004163121312105000110231408856314045013200122912110005183408060943277000021
............................................................TCGAATAGCGTTGTGACTGA..............................................................................................................2011030.001030000000000000000000007230000100000002193101010112114250000000000000000000000000001000000000011000100000000000000000000000000000000000000000000000000000050411000000000002801411633000100000056992000800900000070010000000001423101012750000000054000059080040130311000084141112051650330094310484013063700001423004201200150290161000026101500123253207552557221000000
..........................................................TCTCGAATAGCGTTGTGAC.................................................................................................................191997.009970000000000000000000001070000200000100220011000002000000000000000000000000000412100000000003000202000020000000000000001000000010040012210000030000400000000000000000000072830240222324108800000961200001019000100200100000010016440001120000010022000022007307014013000014226140710193300021314221200006423011824950222701690002111000021391308011147440221000025
...........................................................CTCGAATAGCGTTGTGACTGAG.............................................................................................................221808.008080000000000100000000000010008300000000210042001104240000001000000000000000000000000000100002000103000580000000000002000010100000010002000000000000000004021000000000009220122981521134191300000154212003038000002525600000010027754400314000000001100002100700120900430001261069013410150021001490000011961367615560000030120000441206002816300103984127141600000
..........................................................TCTCGAATAGCGTTGTGACTGG..............................................................................................................221620.006200000000000000000000001010000000000000000011500111335001000000000000000000000000000100000000000000010040010000100000010000001010203200000000000000000100000000000000000017220140413030456000000161200000201000000150010000000001210100000000000001008003901300202001210010621023316007124132697260000121100337113115011007300021365001512300700110022200000
........................................................................................................AGCGGCGAGGCTATTCAAGTA.................................................................211531.005310000100000000000000000000000107110000100000002200000100000000000000000000000001011002002012000412000312103500200001002701010100010000000000000001100001000000000004000750450120101413000601113003000104000000110000001320300000000000000000000002246021001400201000220132166420022700105200322028213323213200001230030217012811230606371073423063140
...........................................................CTCGAATAGCGTTGTGACTG...............................................................................................................201416.00416000000000000000000001002000620000000001000110000100000000000000000000000000000000000000000000000100000000000000000000101000100000000000000000000000000000100000000000953051398374245400000019403000030110000000001000000000711100002000000001000003600107060161000034010328300170032600000043422042211300113081000297100038120205864426300000
..........................................................TCTCGAATAGCGTTGTGACTT...............................................................................................................211366.003660000000000000000000001100000000000000100020020000010000000000000000000000000000000000000000000000000000000000000000002000001010260002000000000000000000000000000000003510140110000100000002002030010200000012000000000000101000000000002001100201270730140801051210001312034720000000200000001725020001250021307700010320012180123542200300000
..........................................................TCTCGAATAGCGTTGTGACTGAAAA...........................................................................................................251313.003130000000000000000000010000000000000200200011002102100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001000000000000101000000000000000000105000010000000680000000000000177410263500000000000000000000000000000000001001100045813165102000000000610000035800100041152000000110000003201000000
..........................................................TCTCGAATAGCGTTGTGACTGAC.............................................................................................................231307.0030700000000000000000000000000000000000001000110010061000000000000000000000000000000000000000000000000000000000000000000000102000001100000000000000000000000010000000000012020012000000000000100032000015000000000000000000022562200314000038001202000401001010002000003000353700124542705000012020043005130260081000318850104490406531110200000
..........................................................TCTCGAATAGCGTTGTGACTGTT.............................................................................................................231246.00246000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000100000000000000000100000000000002000000000000000000000000000000000000217000010020100000000510100001050000000000000000000030200000000000100000000110120201020100000111001200000020600000033020002074000220210000415800049120511736144345500000
..........................................................TCTCGAATAGCGTTGTGACTGAAT............................................................................................................241235.00235000000000000000000000000000000000001000000000100001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000340000000000000000001100100000000001000000000000000042000223000031143000000000000000000000000000130000100000005000000101002000000010104100003100000100101010101200000
............................................................TCGAATAGCGTTGTGACTG...............................................................................................................191213.00213000000000000000000000010000100000001100000111011002000000000000000000000000010000000000000000000000000000000000000000001000000000000000000000002000000000000000000000100021001201000000001303400030300000001000000000000411000000000000000000001402008030112000107020151140033044161200007122200002000011021000224300057130400351125200000
.............................................................CGAATAGCGTTGTGACTGAGGTA..........................................................................................................231191.001910000000000000000000000000000000000010000000000000000000000000000000000000000000000001000000000000000100000000000000000000000000000000000000000000000000000000000000000100100031001000000000001000000004000100000000000005430000210000000010000003010020300210001611203020000001117000000610112554130020110810000109300058140121121000400000
..........................................................TCTCGAATAGCGTTGTGT..................................................................................................................181165.00165000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000101000000020000000000000000000000000000000000000036020200100481000000110000000010000000000100000000020000000000000000000010030010305011000022404033711000000000000001603110021230000202200000000000110201200000600000
..............................................................GAATAGCGTTGTGACTGA..............................................................................................................181164.00164000000000000000000000100000100000000000000001000000000000000000000000000000011010000000000000000000000000000000000000000000000010001200000000000000000106300000000000150001121200100000005241000020100000000000000000000510000110000000000000000100000000000000000000012200224036192400001001000101000040011000000000020100000000000000028
..........................................................TCTCGAATAGCGTTGTGACTGATT............................................................................................................241157.001570000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000002400000100000200000004013000107300000110000000000001610000130000000000000000030020000010003101100010000002190000001411010111000010072000082500017120303781205300000
........................................................................................................AGCGGCGAGGCTATTCAAGT..................................................................201133.0013300000000000000000000110000001000008001000000000000000000000000000000000000000000000000010000000100000600106010000000000102000000100000000000000010000000000000000000054000010021001000020100000000000000000000000010100000000000000000000000000000000003000010000001000010000000100100012021000000000002000100411430201000410621151240030
.........................................................ATCTCGAATAGCGTTGTGACTG...............................................................................................................221132.0013200000000000000000000000100000000100000000000000000020000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000100000700000000000010012000000010000000000010000050000000100000000010041000000000000000000000040100101002000000002000210000001240100003211101302000042010000412310000350131043000000000
.............................................................CGAATAGCGTTGTGACTGAGGT...........................................................................................................221126.00126000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000060000001001000000000011000002000000000000000300002010010000012010002000130151101000030000013250010210510001127300000190202311000100000
.........................................................ATCTCGAATAGCGTTGTGACTGA..............................................................................................................231117.001170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000301000001000000000001001000101000000000000000000002110000200000000011000002000000000100001000201021000512347020000201003112110000001000026100001120200000000000000
..........................................................TCTCGAATAGCGTTGTGACTGATA............................................................................................................241114.00114000000000000000000000000000000000000011001030100001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000010010000100000001001100000000000000000000000000010210001500000200000100000100001000000000000001100013028121000002001050210023040000000119100000110000110000000000
.......................................................................................................CAGCGGCGAGGCTATTCAAGT..................................................................211107.0010700000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000001000000000000001000000000000000000000000000020000100000000000000000000000000100000010000000000000000000000000000000000000000000000000000000000000012000100000000000000014005190000000100110000000000100001220014001010002853222221030
.......................................................................................................CAGCGGCGAGGCTATTCAAGTA.................................................................221103.001030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000100000000000000000020000000000000000000000000000000000100000000000000000011010000000001000400001200001500519000000032111000300000000000048031300721221461100000000
................................................................................GGTAACTGCGCATCGAATCTACTC......................................................................................241101.0010100000000000000000000000000001000000100000000000000000000100000000000000000000000000000010022005100001140000031101002000000000000000000000000000000101010000000000000004204000401111011000000000002000000000000000000000000072143101000000000000000000000000000100000000000000000000000000000000010001300000000110100000000000100000100000
.............................................................CGAATAGCGTTGTGACTGA..............................................................................................................19196.009600000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000100010000000000000000000000000000000001010000020000000000221000000006000000200000000000020000000000000000000000000000000000000001001010530016214161500001000010100000020000000000000000100001000000000020
..........................................................TCTCGAATAGCGTTGTGACTC...............................................................................................................21193.00930000000000000000000000020000000000000000010000200010000000000000000000000000000000000000000000000000000000000000000000000101000010000000000000010000000000000000000001200000000010200000040020000000000000000000000000000000000000000000000000001000020000001000100300121000303211010000601101010031010003300003220001220300010101000000
...........................................................CTCGAATAGCGTTGTGACT................................................................................................................19191.00910000000000000000000000000001000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000010100000200003000000000000000000000000000000003190042102201120000008010000000001200000000000000000200010000000000000000000000100000000000000001000400000012000000120000000200000002100002200002220010110000000000
..........................................................TCTCGAATAGCGTTGTGACA................................................................................................................20191.00910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000300001001000000000010110000001000000000000000000000100010000000020000000000000020100000000030000222000000380100102010100200200000143000031310000070100320301200000
..........................................................TCTCGAATAGCGTTGTGACTA...............................................................................................................21187.00870000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000002301200011001100000021021000000000000020000000000001100000010000511000000000001000000000000001100001100000005110000600000001200001002200011400002020101032100100000
............................................................TCGAATAGCGTTGTGACTGAGG............................................................................................................22186.00860000000000000000000000010000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000100001000000000000000002000000000000000000000000000000000000021000000000000010000000000002110000010000000000000002000000000010000020000021000307024000000000000010100001001000029240000020110002000200000
..........................................................TCTCGAATAGCGTTGTGACTGAAC............................................................................................................24184.008400000000000000000000000000000000000000000010000011100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000003510000100001038000000000000000000000000000000003000100204000000000002100001011100000001000000210000000000000000
.........................................................................................................GCGGCGAGGCTATTCAAGTAA................................................................21182.0082000000000000000000000000000000000000000000100000000000000000000000000000000000000000200100300001300003003404210000000000000000000000000000000000000000020000000000000300400010201040000006010000000000000000000000401000000000000000000000000000100000010010001010001000000020002000000000001000000100020000002000200100000211020000000
...........................................................CTCGAATAGCGTTGTGACTGAGG............................................................................................................23177.00770000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000100010004000000000002000000000000000000000000002200000000000000000000014000000100000000121010400000000003000000402000010500000001000015010051510011011000000000
............................................................TCGAATAGCGTTGTGACT................................................................................................................18176.0076000000000000000000000110000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000100000000000000001000100000000101000000000000000210000001000000000000001002001020030000004130033300000034010000101000001000200000200002330004110011030010200000
..........................................................TCTCGAATAGCGTTGTGACTGAGA............................................................................................................24175.0075000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000100100110000001020100000000000001000000000000114110003000001000000000000000010010000000010013100000125030000002001000000002002000227001000170111010001000000
..........................................................TCTCGAATAGCGTTGTGAT.................................................................................................................19174.00740000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000001270031000001301000000000000000000000000000000000000100000000000000000000001000101010000000001100010000000000000000101110000100000001000000000002100100316001600000
.........................................................................................................GCGGCGAGGCTATTCAAGTAAA...............................................................22172.0072000000000000000000000010000000000000000000000000000000000000000000000000000000000000000100000001300010019623000000000000000000022000000000000000000000040000000000000220100000002000000001000000000000000020000000030000000000000000100000002000000000000000000000001000000010014000010100000000000000001000114000000300000100000000000
droSim2
AAT------GT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
No Reads
droSec2
GTG------GTTTT-----AGCCACGCAGAGGACACACCTG-------AAATTACCCATCTCGAATAGCGTTGTGACTGAGGTAACTGCGCATCGAATCTACTCAGCGGCGAGGCTATTCCAGTAAGGTTGTTT--------------------------------------------------------SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
..........................................................TCTCGAATAGCGTTGTGACTGA..............................................................................................................22130646.0030646147041123815163188
..........................................................TCTCGAATAGCGTTGTGACTG...............................................................................................................2119539.009539333843992471555
..........................................................TCTCGAATAGCGTTGTGACT................................................................................................................2012994.002994925151946504
...........................................................CTCGAATAGCGTTGTGACTGA..............................................................................................................2111246.00124612152425
..........................................................TCTCGAATAGCGTTGTGACTGAA.............................................................................................................231330.003301401103149
...........................................................CTCGAATAGCGTTGTGACTG...............................................................................................................201279.002792651004
..........................................................TCTCGAATAGCGTTGTGACTGT..............................................................................................................221234.0023488119324
..........................................................TCTCGAATAGCGTTGTGACTGAG.............................................................................................................231195.0019596541629
..........................................................TCTCGAATAGCGTTGTGACTGAT.............................................................................................................231171.001718561520
............................................................TCGAATAGCGTTGTGACTGA..............................................................................................................201103.001037010419
...........................................................CTCGAATAGCGTTGTGACTGAG.............................................................................................................22181.0081512415
...........................................................CTCGAATAGCGTTGTGACT................................................................................................................19165.006562102
..........................................................TCTCGAATAGCGTTGTGA..................................................................................................................18158.0058429520
..........................................................TCTCGAATAGCGTTGTGACTT...............................................................................................................21155.0055391006
..........................................................TCTCGAATAGCGTTGTGACTGTT.............................................................................................................23139.003932709
..........................................................TCTCGAATAGCGTTGTGACTGAAA............................................................................................................24137.0037131212
..........................................................TCTCGAATAGCGTTGTGAC.................................................................................................................19135.0035213110
..........................................................TCTCGAATAGCGTTGTGACTGC..............................................................................................................22130.003031908
............................................................TCGAATAGCGTTGTGACTG...............................................................................................................19129.002915329
........................................................................................................AGCGGCGAGGCTATTCCAGTAA................................................................22125.00257828
..........................................................TCTCGAATAGCGTTGTGACTGG..............................................................................................................22121.002111604
........................................................................................................AGCGGCGAGGCTATTCCAGTA.................................................................21118.00182817
.............................................................CGAATAGCGTTGTGACTGA..............................................................................................................19116.001614200
...........................................................CTCGAATAGCGTTGTGACTGAA.............................................................................................................22115.001515000
..........................................................TCTCGAATAGCGTTGTGACTGATT............................................................................................................24114.00144802
..........................................................TCTCGAATAGCGTTGTGACTGAC.............................................................................................................23112.00128220
...........................................................CTCGAATAGCGTTGTGACTGG..............................................................................................................21112.001212000
.........................................................ATCTCGAATAGCGTTGTGACTGA..............................................................................................................23112.001212000
...........................................................CTCGAATAGCGTTGTGACTGT..............................................................................................................21111.00119101
............................................................TCGAATAGCGTTGTGACT................................................................................................................18111.00117202
.............................................................CGAATAGCGTTGTGACTGAGGT...........................................................................................................2219.0093501
........................................................................................................AGCGGCGAGGCTATTCCAGT..................................................................2019.0094500
..........................................................TCTCGAATAGCGTTGTGACTA...............................................................................................................2118.0083401
.............................................................CGAATAGCGTTGTGACTGAGG............................................................................................................2117.0071501
.............................................................CGAATAGCGTTGTGACTGAGGTA..........................................................................................................2317.0073301
..........................................................TCTCGAATAGCGTTGTGAT.................................................................................................................1917.0072203
..........................................................TCTCGAATAGCGTTGTGACTGAAAA...........................................................................................................2516.0064110
..........................................................TCTCGAATAGCGTTGTGTT.................................................................................................................1925.50115303
..............................................................GAATAGCGTTGTGACTGA..............................................................................................................1815.0054001
................................................................................GGTAACTGCGCATCGAATCTACT.......................................................................................2315.0055000
.........................................................ATCTCGAATAGCGTTGTGACTG...............................................................................................................2215.0052102
..........................................................TCTCGAATAGCGTTGTGT..................................................................................................................1815.0050005
...........................................................CTCGAATAGCGTTGTGACTGAGG............................................................................................................2315.0052120
..........................................................TCTCGAATAGCGTTGTGACA................................................................................................................2015.0052210
..........................................................TCTCGAATAGCGTTGTGACC................................................................................................................2015.0050401
..........................................................TCTCGAATAGCGTTGTGACTGAGGTC..........................................................................................................2614.0040400
..........................................................TCTCGAATAGCGTTGTGACTTT..............................................................................................................2214.0042200
..........................................................TCTCGAATAGCGTTGTGACTGAGA............................................................................................................2414.0040310
.............................................................CGAATAGCGTTGTGACTG...............................................................................................................1814.0044000
.........................................................................................................GCGGCGAGGCTATTCCAGTAA................................................................2114.0044000
........................................................................................................AGCGGCGAGGCTATTCCAG...................................................................1914.0040004
............................................................TCGAATAGCGTTGTGACTGAGG............................................................................................................2214.0041300
..........................................................TCTCGAATAGCGTTGTGACTGAGT............................................................................................................2414.0042200
...........................................................CTCGAATAGCGTTGTGACTGAT.............................................................................................................2214.0044000
............................................................TCGAATAGCGTTGTGACTGAG.............................................................................................................2114.0043001
..........................................................TCTCGAATAGCGTTGTGACTGACTC...........................................................................................................2513.0030201
..........................................................TCTCGAATAGCGTTGTGACTGTTT............................................................................................................2413.0032100
..........................................................TCTCGAATAGCGTTGTGACTGAAT............................................................................................................2413.0032100
..........................................................TCTCGAATAGCGTTGTGACTGAGG............................................................................................................2413.0032001
...........................................................CTCGAATAGCGTTGTGACTGAGT............................................................................................................2313.0033000
..........................................................TCTCGAATAGCGTTGTGAA.................................................................................................................1913.0032001
.............................................................CGAATAGCGTTGTGACTGAGGTT..........................................................................................................2313.0031101
.........................................................ATCTCGAATAGCGTTGTGACT................................................................................................................2113.0032100
..........................................................TCTCGAATAGCGTTGTGACG................................................................................................................2012.0022000
......................................................................................................TCAGCGGCGAGGCTATTCCAG...................................................................2112.0021001
...........................................................CTCGAATAGCGTTGTGACTGAC.............................................................................................................2212.0022000
...........................................................CTCGAATAGCGTTGTGACTT...............................................................................................................2012.0022000
..........................................................TCTCGAATAGCGTTGTGACTC...............................................................................................................2112.0021001
...........................................................CTCGAATAGCGTTGTGACTTG..............................................................................................................2111.0011000
..........................................................TCTCGAATAGCGTTGTGACCT...............................................................................................................2111.0010100
droYak3
GTT------GTTTT-----AGAAACGCAGAGGACACACCTA-------AAATTACCCATCTCGAATAGCGTTGTGACTGAGGTAACTGCGCATCGTATCTACTCAGCGGCGAAGCTATTCCAGTAAGGTTATTT--------------------------------------------------------SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
..........................................................TCTCGAATAGCGTTGTGACTGA..............................................................................................................22114537.0014537974917451770176167282605311425
..........................................................TCTCGAATAGCGTTGTGACT................................................................................................................2012407.00240721121116101326830010
..........................................................TCTCGAATAGCGTTGTGACTGG..............................................................................................................2211878.001878186311210100000
..........................................................TCTCGAATAGCGTTGTGACTG...............................................................................................................2111077.001077231388813044702177270
..........................................................TCTCGAATAGCGTTGTGACTGAA.............................................................................................................231443.004433163764434150000
..........................................................TCTCGAATAGCGTTGTGACC................................................................................................................201283.0028325602700000000
..........................................................TCTCGAATAGCGTTGTGAC.................................................................................................................191270.00270129512301102018
...........................................................CTCGAATAGCGTTGTGACTGA..............................................................................................................211175.0017514156300020000
..........................................................TCTCGAATAGCGTTGTGACTGT..............................................................................................................22188.00885415311590000
..........................................................TCTCGAATAGCGTTGTGACTGAT.............................................................................................................23186.008638177014300016
..........................................................TCTCGAATAGCGTTGTGACTGAAA............................................................................................................24162.006215113240000000
..........................................................TCTCGAATAGCGTTGTGACG................................................................................................................20148.0048480000000000
...........................................................CTCGAATAGCGTTGTGACTGAG.............................................................................................................22147.00471323202250000
..........................................................TCTCGAATAGCGTTGTGACTGC..............................................................................................................22138.00381525101410000
...........................................................CTCGAATAGCGTTGTGACTG...............................................................................................................20135.0035133000010000
..........................................................TCTCGAATAGCGTTGTGACTGAG.............................................................................................................23133.0033158700030000
..........................................................TCTCGAATAGCGTTGTGACTGAC.............................................................................................................23128.0028212400100000
..........................................................TCTCGAATAGCGTTGTGACTGTT.............................................................................................................23121.0021141000240000
............................................................TCGAATAGCGTTGTGACTGA..............................................................................................................20118.0018213001110000
..........................................................TCTCGAATAGCGTTGTGACTGAGG............................................................................................................24111.001121000000008
............................................................TCGAATAGCGTTGTGACTGAGG............................................................................................................22110.001032310010000
..........................................................TCTCGAATAGCGTTGTGA..................................................................................................................1819.00921011210100
..........................................................TCTCGAATAGCGTTGTGACTGATT............................................................................................................2419.00951100020000
...........................................................CTCGAATAGCGTTGTGACT................................................................................................................1918.00844000000000
........................................................................................................AGCGGCGAAGCTATTCCAGTAA................................................................2216.00601130100000
..........................................................TCTCGAATAGCGTTGTGACTGAAAA...........................................................................................................2516.00601400010000
...........................................................CTCGAATAGCGTTGTGACTGG..............................................................................................................2116.00660000000000
..........................................................TCTCGAATAGCGTTGTGACTGAAC............................................................................................................2414.00411200000000
.............................................................CGAATAGCGTTGTGACTGAGGT...........................................................................................................2214.00421000010000
..........................................................TCTCGAATAGCGTTGTGACTGAAT............................................................................................................2414.00412100000000
..........................................................TCTCGAATAGCGTTGTGACTT...............................................................................................................2114.00430001000000
.............................................................CGAATAGCGTTGTGACTGA..............................................................................................................1914.00422000000000
........................................................................................................AGCGGCGAAGCTATTCCAGTA.................................................................2113.00302010000000
...........................................................CTCGAATAGCGTTGTGACTGAT.............................................................................................................2213.00303000000000
............................................................TCGAATAGCGTTGTGACTG...............................................................................................................1913.00302000010000
.........................................................ATCTCGAATAGCGTTGTGACTG...............................................................................................................2213.00311100000000
.............................................................CGAATAGCGTTGTGACTGAGG............................................................................................................2113.00301000020000
..........................................................TCTCGAATAGCGTTGTGACTGAGGT...........................................................................................................2513.00320100000000
..........................................................TCTCGAATAGCGTTGTGACTA...............................................................................................................2113.00310001010000
..............................................................GAATAGCGTTGTGACTGA..............................................................................................................1813.00312000000000
...........................................................CTCGAATAGCGTTGTGAC.................................................................................................................1812.00202000000000
.........................................................................................................GCGGCGAAGCTATTCCAGTAA................................................................2112.00202000000000
.........................................................................................................GCGGCGAAGCTATTCCAGTAAA...............................................................2212.00202000000000
..........................................................TCTCGAATAGCGTTGTGACTGTCT............................................................................................................2412.00220000000000
...........................................................CTCGAATAGCGTTGTGACTGAA.............................................................................................................2212.00202000000000
.............................................................CGAATAGCGTTGTGACTGAG.............................................................................................................2012.00200000020000
.........................................................................................................GCGGCGAAGCTATTCCAGTAAG...............................................................2212.00201100000000
.........................................................ATCTCGAATAGCGTTGTGACTGA..............................................................................................................2311.00101000000000
............................................................TCGAATAGCGTTGTGACTGAGGTAACT.......................................................................................................2711.00100000010000
...........................................................CTCGAATAGCGTTGTGACTGAGGG...........................................................................................................2411.00110000000000
..........................................................TCTCGAATAGCGTTGTGACTGACA............................................................................................................2411.00100100000000
..........................................................TCTCGAATAGCGTTGTGACTGAGGTAACC.......................................................................................................2911.00110000000000
........................................................................................................AGCGGCGAAGCTATTCCAGTAAA...............................................................2311.00101000000000
....................................................................................................ACTCAGCGGCGAAGCTATTCCA....................................................................2211.00100000010000
............................................................TCGAATAGCGTTGTGACTGAGGT...........................................................................................................2311.00100100000000
..........................................................TCTCGAATAGCGTTGTGACTCG..............................................................................................................2211.00110000000000
..........................................................TCTCGAATAGCGTTGTGACTGAGT............................................................................................................2411.00110000000000
..........................................................TCTCGAATAGCGTTGTGACTGCC.............................................................................................................2311.00100000100000
.........................................................................................................GCGGCGAAGCTATTCCAGTAAGC..............................................................2311.00100100000000
..........................................................TCTCGAATAGCGTTGTGACTGTTT............................................................................................................2411.00110000000000
..........................................................................................................CGGCGAAGCTATTCCAGTA.................................................................1911.00101000000000
..................................................................................................CTACTCAGCGGCGAAGCTATTCCA....................................................................2411.00101000000000
.............................................................CGAATAGCGTTGTGACTGATT............................................................................................................2111.00100000100000
.........................................................ATCTCGAATAGCGTTGTGACT................................................................................................................2111.00101000000000
droEre2
AAAGTCGTACTTTT-----AG------ATACGAGATACCTA-------AGATTACCCATCTCGAATAGCGTTGTGACTGAGGTAACTGCGCATCGAATCTACTCAGCGGCAAGGCTATTCCAGTAAGGTTATTT-TGGGCCAGC---GACTCAAC-------------GAC------------CGGAAAASizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
..........................................................TCTCGAATAGCGTTGTGACTG...............................................................................................................2112879.00287915461943879442400
..........................................................TCTCGAATAGCGTTGTGACTGA..............................................................................................................2212833.002833156412635132676157143
..........................................................TCTCGAATAGCGTTGTGACT................................................................................................................2012625.002625119941391710243023
...........................................................CTCGAATAGCGTTGTGACTG...............................................................................................................201323.00323200030110100
...........................................................CTCGAATAGCGTTGTGACTGAG.............................................................................................................221303.00303144032123238
...........................................................CTCGAATAGCGTTGTGACTGA..............................................................................................................211219.0021916001038416
.............................................................CGAATAGCGTTGTGACTGAGG............................................................................................................211171.001717311084120
...........................................................CTCGAATAGCGTTGTGACT................................................................................................................191120.00120830003430
.............................................................CGAATAGCGTTGTGACTGAGGTA..........................................................................................................231114.00114441215970
..........................................................TCTCGAATAGCGTTGTGAC.................................................................................................................191109.001095316213430
.............................................................CGAATAGCGTTGTGACTGAGGT...........................................................................................................22195.00952802250121
..........................................................TCTCGAATAGCGTTGTGACTGAT.............................................................................................................23158.00581400010034
..........................................................TCTCGAATAGCGTTGTGACTGAG.............................................................................................................23157.005781026238
..........................................................TCTCGAATAGCGTTGTGACTT...............................................................................................................21149.0049261311530
..........................................................TCTCGAATAGCGTTGTGA..................................................................................................................18144.0044180029150
..........................................................TCTCGAATAGCGTTGTGACTGAA.............................................................................................................23136.00361110010410
..........................................................TCTCGAATAGCGTTGTGACTGT..............................................................................................................22126.0026120021110
........................................................................................................AGCGGCAAGGCTATTCCAGTAA................................................................22125.002516400410
.....................................................................................................CTCAGCGGCAAGGCTATTCCAG...................................................................22125.002550031340
.............................................................CGAATAGCGTTGTGACTGAG.............................................................................................................20122.002230101530
............................................................TCGAATAGCGTTGTGACTG...............................................................................................................19115.001510001310
............................................................TCGAATAGCGTTGTGACTGA..............................................................................................................20114.001413000010
.......................................................................................................CAGCGGCAAGGCTATTCCAGTA.................................................................22114.00146000620
..........................................................TCTCGAATAGCGTTGTGACA................................................................................................................20112.00123000630
.............................................................CGAATAGCGTTGTGACTGAGGTT..........................................................................................................23110.00103000610
..........................................................TCTCGAATAGCGTTGTGACC................................................................................................................2019.0091600200
............................................................TCGAATAGCGTTGTGACT................................................................................................................1819.0093000420
.....................................................................................................CTCAGCGGCAAGGCTATTCCA....................................................................2119.0090001800
............................................................TCGAATAGCGTTGTGACTGAG.............................................................................................................2119.0098000100
...........................................................CTCGAATAGCGTTGTGACTGTT.............................................................................................................2219.0090000630
...........................................................CTCGAATAGCGTTGTGAC.................................................................................................................1818.0087000100
........................................................................................................AGCGGCAAGGCTATTCCAGT..................................................................2017.0074010200
...........................................................CTCGAATAGCGTTGTGACTT...............................................................................................................2017.0072000500
.......................................................................................................CAGCGGCAAGGCTATTCCAGT..................................................................2117.0072000500
......................................................................................................TCAGCGGCAAGGCTATTCCAG...................................................................2117.0072001310
.............................................................CGAATAGCGTTGTGACTG...............................................................................................................1817.0073000310
...........................................................CTCGAATAGCGTTGTGACTGT..............................................................................................................2117.0074000210
..........................................................TCTCGAATAGCGTTGTGACTGG..............................................................................................................2217.0075001010
..........................................................TCTCGAATAGCGTTGTGACTGTT.............................................................................................................2317.0071000420
...........................................................CTCGAATAGCGTTGTGACTTT..............................................................................................................2117.0072000500
.............................................................CGAATAGCGTTGTGACTGA..............................................................................................................1917.0074001200
..............................................................GAATAGCGTTGTGACTGAGG............................................................................................................2016.0065000100
..........................................................TCTCGAATAGCGTTGTGAA.................................................................................................................1916.0063000300
.........................................................................................................GCGGCAAGGCTATTCCAGTAAA...............................................................2215.0054100000
..........................................................TCTCGAATAGCGTTGTGT..................................................................................................................1815.0051010300
..........................................................TCTCGAATAGCGTTGTGACTGAC.............................................................................................................2315.0051000103
......................................................................................................TCAGCGGCAAGGCTATTCCAGT..................................................................2215.0052000300
............................................................TCGAATAGCGTTGTGACTGAGG............................................................................................................2214.0042000200
........................................................................................................AGCGGCAAGGCTATTCCAGTA.................................................................2114.0041100200
..........................................................TCTCGAATAGCGTTGTGAT.................................................................................................................1914.0044000000
.............................................................CGAATAGCGTTGTGACTGAGGTTT.........................................................................................................2414.0041000300
..........................................................TCTCGAATAGCGTTGTGACTGATT............................................................................................................2414.0041000300
.........................................................ATCTCGAATAGCGTTGTGACTG...............................................................................................................2214.0041011100
.............................................................CGAATAGCGTTGTGACTGAGGTAT.........................................................................................................2413.0031000200
.............................................................CGAATAGCGTTGTGACTGTT.............................................................................................................2013.0031000200
..........................................................TCTCGAATAGCGTTGTGACTTT..............................................................................................................2213.0032000100
.........................................................................................................GCGGCAAGGCTATTCCAGTAA................................................................2113.0032100000
...........................................................CTCGAATAGCGTTGTGACTGAGT............................................................................................................2313.0032000100
..........................................................TCTCGAATAGCGTTGTGACTGAAA............................................................................................................2413.0031000200
..........................................................TCTCGAATAGCGTTGTGTT.................................................................................................................1932.3374000210
..........................................................TCTCGAATAGCGTTGTGACTGGA.............................................................................................................2312.0021000100
..............................................................GAATAGCGTTGTGACTGAGGTA..........................................................................................................2212.0021000100
.............................................................CGAATAGCGTTGTGACTGTTT............................................................................................................2112.0020000200
...........................................................CTCGAATAGCGTTGTGACTGTTT............................................................................................................2312.0020000200
.....................................................................................................CTCAGCGGCAAGGCTATTCCAGT..................................................................2312.0020000200
.........................................................................................................GCGGCAAGGCTATTCCAGTAAT...............................................................2212.0021001000
...........................................................CTCGAATAGCGTTGTGACTGG..............................................................................................................2112.0022000000
..............................................................GAATAGCGTTGTGACTGAG.............................................................................................................1912.0022000000
..........................................................TCTCGAATAGCGTTGTGACTGC..............................................................................................................2212.0020000101
...........................................................CTCGAATAGCGTTGTGACTTTT.............................................................................................................2212.0020000200
......................................................................................................TCAGCGGCAAGGCTATTCCAGTT.................................................................2312.0021000100
..........................................................TCTCGAATAGCGTTGTGACTA...............................................................................................................2112.0022000000
.......................................................................................................CAGCGGCAAGGCTATTCCAGTT.................................................................2212.0022000000
..........................................................TCTCGAATAGCGTTGTGACTC...............................................................................................................2112.0021010000
..........................................................TCTCGAATAGCGTTGTGTA.................................................................................................................1921.5030000300
.................................................................................................TCTACTCAGCGGCAAGGCTAT........................................................................2111.0011000000
......................................................................................................TCAGCGGCAAGGCTATTCCA....................................................................2011.0010000100
....................................................................................................ACTCAGCGGCAAGGCTATTCCAG...................................................................2311.0010000100
.........................................................................................................GCGGCAAGGCTATTCCAGTA.................................................................2011.0011000000
..........................................................TCTCGAATAGCGTTGTGACG................................................................................................................2011.0011000000
...............................................................AATAGCGTTGTGACTGAGGTA..........................................................................................................2111.0011000000
...........................................................CTCGAATAGCGTTGTGACTGAT.............................................................................................................2211.0010000100
................................................................................GGTAACTGCGCATCGAATCTACTC......................................................................................2411.0011000000
................................................................ATAGCGTTGTGACTGAGG............................................................................................................1811.0011000000
.........................................................................................................GCGGCAAGGCTATTCCAGT..................................................................1911.0010000100
.......................................................................TGTGACTGAGGTAACTGCGC...................................................................................................2011.0010100000
..........................................................TCTCGAATAGCGTTGTGACTGTA.............................................................................................................2311.0010000010
......................................................................................................TCAGCGGCAAGGCTATTCCAGTAA................................................................2411.0011000000
.............................................................CGAATAGCGTTGTGACTGAGT............................................................................................................2111.0010000100

Generated: 10/20/2015 at 06:56 PM