ID:

dmo_2195

 Coordinate:

scaffold_6541:370923-371073 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.2 -12.2 -12.1 -12.1

Flybase annnotation

exon [dmoj_GLEANR_14470:1]; CDS [Dmoj\GI14199-cds]; intron [Dmoj\GI14199-in]

No Repeatable elements found

mature
star
  1. scaffold_6541:69550-69576 -
  2. dmo_2195  scaffold_6541:370932-370958 +
  3. dmo_2208  scaffold_6541:944118-944144 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GGCACTAAACACTGCAATAGAAGATGCCTCTACGGTATCCTTAATGTGCAGTAATCTTGAAAACATTGAAAATACTGTGCAGAACCATGAGTTTTCCCGAAAAGCTCCTAAAAGGCCTCAATCTCCATTGCCAGTTATTGAAGGAGCAACACATGCAACTTTACCATCTTCTGGTGGCTTTAATGGGCTTAGTAAGCAAGTCATTACTTTGAATTATAATACAACTCATTATTTTATTTCATTAGATATTA
***********************************************************.................((........(((.(((..........((((((((..(((.............)))..))).....)))))))).)))...))******************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body		 V049
head
.GCACTAAACACTGCAATAGAAGATGCC............................................................................................................................................................................................................................... 27 0 5 6.80 34 19 15 0 0
...................................................................................................................................CAGTTATTGAAGGAGCAACACATGCAAC............................................................................................ 28 0 1 5.00 5 2 3 0 0
...........................................................AAAACATTGAAAATACTGTGCAGAACC..................................................................................................................................................................... 27 0 3 2.33 7 4 3 0 0
...................................................................................................................................CAGTTATTGAAGGAGCAACACATGC............................................................................................... 25 0 1 2.00 2 0 1 1 0
....................................................AATCTTGAAAACATTGAAAATACTG.............................................................................................................................................................................. 25 0 5 1.40 7 7 0 0 0
.GCACTAAACACTGCAATAGAAGATG................................................................................................................................................................................................................................. 25 0 6 1.33 8 8 0 0 0
...................................................................................................................................CAGTTATTGAAGGAGCAACACATGCAACT........................................................................................... 29 0 1 1.00 1 1 0 0 0
...................................................................................................................................CAGATATTGAAGGAGCAACACATGCAACT........................................................................................... 29 1 1 1.00 1 0 1 0 0
....................................................................................................................................AGTTATTGAAGGAGCAACACATG................................................................................................ 23 0 1 1.00 1 1 0 0 0
....................................................................................................................................AGTTATTGAAGGAGCAACACATGCAAC............................................................................................ 27 0 1 1.00 1 1 0 0 0
.........................................................................................................................................TTGAAGGAGCAACACATGCAACTTT......................................................................................... 25 0 1 1.00 1 1 0 0 0
...................................................................................................................................CAGTTATTGAAGGAGCAACACATG................................................................................................ 24 0 1 1.00 1 0 0 1 0
....................................................AATCTTGAAAACATTGAAAATACT............................................................................................................................................................................... 24 0 5 0.80 4 4 0 0 0
...........................................................AAAACATTGAAAATACTGTGCAGAACCA.................................................................................................................................................................... 28 0 3 0.67 2 2 0 0 0
.GCACTAAACACTGCAATAGAAGATGCCTC............................................................................................................................................................................................................................. 29 0 5 0.60 3 2 1 0 0
....................................................AATCTTGAAAACATTGAAAATACTGT............................................................................................................................................................................. 26 0 5 0.40 2 1 1 0 0
.GCATTAAACACTGCAATAGAAGATGCC............................................................................................................................................................................................................................... 27 1 5 0.40 2 0 2 0 0
....................................................AATCTTGAAAACATTGAAAATACTGTGC........................................................................................................................................................................... 28 0 5 0.40 2 2 0 0 0
...........................................................AAAACATTGAACATACTGTGCAGAACC..................................................................................................................................................................... 27 1 3 0.33 1 0 1 0 0
..........................................................GAAAACATTGAAAATACTGTGCAGAACCA.................................................................................................................................................................... 29 0 3 0.33 1 1 0 0 0
..............................................................ACATTGAAAATACTGTGCAGAACC..................................................................................................................................................................... 24 0 3 0.33 1 0 1 0 0
.GCACTAAACACTGCAATAGAAGATGC................................................................................................................................................................................................................................ 26 0 6 0.33 2 2 0 0 0
...................................................................................................................................CAGTTATTGAAGGAGCAACACAT................................................................................................. 23 0 6 0.33 2 1 1 0 0
....................................................................................................................................................CCACACGCAACTTTACCATTTT................................................................................. 22 3 3 0.33 1 0 0 0 1
............................................................AAACATTGAAAATACTGTGCAGAACC..................................................................................................................................................................... 26 0 3 0.33 1 0 1 0 0
.............................................................................................................................................................................................................................CAACTCATTATTTTATTTCATTAGATAT.. 28 0 4 0.25 1 1 0 0 0
.............................................................................................................................................................................................................................CAACTCATTATTTTATTTCATTAGATA... 27 0 4 0.25 1 1 0 0 0
.............................................................................................TTCCCGAAAAGCTCCTAAAAGGCC...................................................................................................................................... 24 0 4 0.25 1 0 1 0 0
..............................................................................................TCCCGAAAAGCTCCTAAAAGGCC...................................................................................................................................... 23 0 4 0.25 1 0 1 0 0
............................................................................................TTTCCCGAAAAGCTCCTAAAAGGCC...................................................................................................................................... 25 0 4 0.25 1 1 0 0 0
.GCACTAAACACTGCAATAGAAGATGCCC.............................................................................................................................................................................................................................. 28 1 5 0.20 1 0 1 0 0
.GCACTAAACACTGCAATAGAAGATGCCT.............................................................................................................................................................................................................................. 28 0 5 0.20 1 0 1 0 0
.GCACTAAACACTGCAATAGAAGATGAC............................................................................................................................................................................................................................... 27 1 5 0.20 1 0 1 0 0
.GTACTAAACACTGCAATAGAAGATGCC............................................................................................................................................................................................................................... 27 1 5 0.20 1 0 1 0 0
.......................................................CTTGAAAACATTGAAAATACTGTGC........................................................................................................................................................................... 25 0 5 0.20 1 1 0 0 0
..................................................GTAATCTTGAAAACATTGAAAATACTG.............................................................................................................................................................................. 27 0 5 0.20 1 1 0 0 0
..CACTAAACACTGCAATAGAAGATGCC............................................................................................................................................................................................................................... 26 0 5 0.20 1 1 0 0 0
....................................................AGTCTTGAAAACATTGAAAATACTGT............................................................................................................................................................................. 26 1 5 0.20 1 0 1 0 0
....................................................AATCTTGAAAAGATTGAAAATACTG.............................................................................................................................................................................. 25 1 5 0.20 1 1 0 0 0
...........................................................AAAACATTGAAAATACTGTGCAGA........................................................................................................................................................................ 24 0 5 0.20 1 1 0 0 0
.......................................................CTCGAAAACATTGAAAATACTGT............................................................................................................................................................................. 23 1 5 0.20 1 0 1 0 0
....................................................AATCTTGAAAACATTGAAAATACTGTG............................................................................................................................................................................ 27 0 5 0.20 1 1 0 0 0
.GGACTAAACACTGCAATAGAAGATGCC............................................................................................................................................................................................................................... 27 1 5 0.20 1 0 1 0 0
..CACTAAACACTGCAATAGAAGATG................................................................................................................................................................................................................................. 24 0 6 0.17 1 1 0 0 0
...................................................................................................................................CAGTTATTGAAGGAGCAACACA.................................................................................................. 22 0 6 0.17 1 1 0 0 0
...........................................................................................................................................................................................CTTAGTAAGCAAGTCATTACT........................................... 21 0 6 0.17 1 1 0 0 0
.GCACTAAACACTGCAATAGAAGAT.................................................................................................................................................................................................................................. 24 0 20 0.15 3 3 0 0 0
...........................................................................................................................................................................................CCTAGTAAGCAAGTCATC.............................................. 18 2 7 0.14 1 0 0 1 0
...........................................................................................................................................................................................CCTAGTAAGCAAGTCATCA............................................. 19 2 7 0.14 1 0 0 1 0
...................................................................................................................................CAGTTATTGAAGGAGCAAC..................................................................................................... 19 0 8 0.13 1 0 0 1 0
...........................................................................................................................TTCATGGGCAGTTATTGAAGG........................................................................................................... 21 3 10 0.10 1 0 0 1 0
..............................................................................................................................ATGGGCAGTTATTGAAGG........................................................................................................... 18 2 12 0.08 1 0 0 1 0
...................................................................................TCGATGATTTTTCCCGAAAA.................................................................................................................................................... 20 3 17 0.06 1 0 1 0 0
.GCACTAAACACTGCAATAGAAGATTCC............................................................................................................................................................................................................................... 27 1 20 0.05 1 1 0 0 0
.GCACTAAACACCGCAATAGAAGAT.................................................................................................................................................................................................................................. 24 1 20 0.05 1 0 1 0 0

Anti-sense strand reads

CCGTGATTTGTGACGTTATCTTCTACGGAGATGCCATAGGAATTACACGTCATTAGAACTTTTGTAACTTTTATGACACGTCTTGGTACTCAAAAGGGCTTTTCGAGGATTTTCCGGAGTTAGAGGTAACGGTCAATAACTTCCTCGTTGTGTACGTTGAAATGGTAGAAGACCACCGAAATTACCCGAATCATTCGTTCAGTAATGAAACTTAATATTATGTTGAGTAATAAAATAAAGTAATCTATAAT
********************************************************************************************.................((........(((.(((..........((((((((..(((.............)))..))).....)))))))).)))...))*********************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V041
embryo
 V110
male body		 V056
head
 V049
head
...................................................................................................................GGAGTTAGAGGTAACGGTCAATAACT.............................................................................................................. 26 0 3 39.33 118 88 18 5 6 1 0
.................................................................................................................CCGGAGTTAGAGGTAACGGTCAATAACT.............................................................................................................. 28 0 3 27.67 83 31 52 0 0 0 0
..................................................................................................................CGGAGTTAGAGGTAACGGTCAATAACT.............................................................................................................. 27 0 3 22.67 68 43 24 1 0 0 0
....................................................................................................................GAGTTAGAGGTAACGGTCAATAACT.............................................................................................................. 25 0 3 13.33 40 39 0 1 0 0 0
....................................TAGGAATTACACGTCATTAGAACTTT............................................................................................................................................................................................. 26 0 5 10.80 54 46 6 2 0 0 0
......................................GGAATTACACGTCATTAGAACTTT............................................................................................................................................................................................. 24 0 5 9.60 48 43 1 4 0 0 0
.....................................AGGAATTACACGTCATTAGAACTTT............................................................................................................................................................................................. 25 0 5 7.80 39 37 1 0 1 0 0
...........................................TACACGTCATTAGAACTTTTGTAACT...................................................................................................................................................................................... 26 0 4 6.00 24 12 12 0 0 0 0
......................................................................................................................GTTAGAGGTAACGGTCAATAACT.............................................................................................................. 23 0 3 5.00 15 14 1 0 0 0 0
.....................................................................................................................AGTTAGAGGTAACGGTCAATAACT.............................................................................................................. 24 0 3 3.00 9 8 1 0 0 0 0
....................................................................................GGTACTCAAAAGGGCTTTTCGAGGAT............................................................................................................................................. 26 0 4 2.75 11 8 1 1 1 0 0
............................................ACACGTCATTAGAACTTTTGTAACT...................................................................................................................................................................................... 25 0 4 2.75 11 9 1 1 0 0 0
...................................................................................................................GGAGTTAGAGGTAACGGTCAATAAC............................................................................................................... 25 0 3 1.67 5 5 0 0 0 0 0
................................................................................................................TCCGGAGTTAGAGGTAACGGTCAATAACT.............................................................................................................. 29 0 3 1.67 5 0 5 0 0 0 0
.................................................................................................................CAGGAGTTAGAGGTAACGGTCAATAACT.............................................................................................................. 28 1 3 1.67 5 0 5 0 0 0 0
..........................................TTACACGTCATTAGAACTTTTGTAACT...................................................................................................................................................................................... 27 0 4 1.50 6 3 3 0 0 0 0
............................................ACACGTCATTAGAACTTTTGTAACTT..................................................................................................................................................................................... 26 0 4 1.50 6 6 0 0 0 0 0
......................................GGAATTACACGTCATTAGAACTTTTGT.......................................................................................................................................................................................... 27 0 5 1.40 7 6 1 0 0 0 0
.................................................................................................................CCGGAGTTAGAGGTAACGGTCAATAAC............................................................................................................... 27 0 3 1.33 4 4 0 0 0 0 0
....................................................................................................................GAGTTAGAGGTAACGGTCAATAAC............................................................................................................... 24 0 3 1.33 4 4 0 0 0 0 0
...........................................TACACGTCATTAGAACTTTTGTAACTT..................................................................................................................................................................................... 27 0 4 1.25 5 4 1 0 0 0 0
................................GCCATAGGAATTACACGTCATTAGAACT............................................................................................................................................................................................... 28 0 5 1.20 6 6 0 0 0 0 0
....................................TAGGAATTACACGTCATTAGAACTTTTGT.......................................................................................................................................................................................... 29 0 5 1.00 5 3 2 0 0 0 0
............................................................................................................................................................................CCACCGAAATTACCCGAATCATTCGT..................................................... 26 0 2 1.00 2 1 1 0 0 0 0
.....................................AGGAATTACACGTCATTAGAACTT.............................................................................................................................................................................................. 24 0 5 1.00 5 5 0 0 0 0 0
.................................................................................................................CCGGAGTTAGAGGTAACGGTCAATTACT.............................................................................................................. 28 1 3 1.00 3 0 3 0 0 0 0
.........................................................................................................................................................................AGACCACCGAAATTACCCGAATCATTCGT..................................................... 29 0 2 1.00 2 2 0 0 0 0 0
.......................................................................................................................TTAGAGGTAACGGTCAATAACT.............................................................................................................. 22 0 3 1.00 3 2 1 0 0 0 0
.....................................AGGAATTACACGTCATTAGAACTTTTGT.......................................................................................................................................................................................... 28 0 5 1.00 5 4 1 0 0 0 0
....................................TAGGAATTACACGTCATTAGAACTT.............................................................................................................................................................................................. 25 0 5 1.00 5 5 0 0 0 0 0
.............................................................................................................................................CCCTCGTTGTGTACGTTGAAATGGT..................................................................................... 25 1 1 1.00 1 0 1 0 0 0 0
..............................................................................................................................................................................ACCGAAATTACCCGAATCATTCGTT.................................................... 25 0 4 0.75 3 2 1 0 0 0 0
.............................................CACGTCATTAGAACTTTTGTAACT...................................................................................................................................................................................... 24 0 4 0.75 3 3 0 0 0 0 0
..............................................................................................................................................................................ACCGAAATTACCCGAATCATTCGTTCAGT................................................ 29 0 4 0.75 3 3 0 0 0 0 0
.........................................ATTACACGTCATTAGAACTTTTGTAACT...................................................................................................................................................................................... 28 0 4 0.75 3 3 0 0 0 0 0
...........GACGTTATCTTCTACGGAGATGCCAT...................................................................................................................................................................................................................... 26 0 4 0.75 3 3 0 0 0 0 0
.....................................................................................GTACTCAAAAGGGCTTTTCGAGGAT............................................................................................................................................. 25 0 4 0.75 3 3 0 0 0 0 0
..................................................................................................................CGGAGTTAGAGGTAACGGTCAATAAC............................................................................................................... 26 0 3 0.67 2 2 0 0 0 0 0
...............................................................................................................................................................................................CATTCGTTCAGTAATGAAACTTAATAT................................. 27 0 4 0.50 2 0 2 0 0 0 0
..............................................ACGTCATTAGAACTTTTGTAACT...................................................................................................................................................................................... 23 0 4 0.50 2 1 0 1 0 0 0
..........................................................................................................................................................................GACCACCGAAATTACCCGAATCATTCGT..................................................... 28 0 2 0.50 1 1 0 0 0 0 0
..................................................................................................................CGGAGTTAGAGGTAACGGTCAAT.................................................................................................................. 23 0 4 0.50 2 0 2 0 0 0 0
.............................................................................................................................................................................CACCGAAATTACCCGAATCATTCGT..................................................... 25 0 2 0.50 1 1 0 0 0 0 0
...........................................................................................................................................................................ACCACCGAAATTACCCGAATCATTCGT..................................................... 27 0 2 0.50 1 0 1 0 0 0 0
..........................................................................GACACGTCTTGGTACTCAAAAGGGCTTTT.................................................................................................................................................... 29 0 6 0.50 3 3 0 0 0 0 0
.................................................................................................................................................................................GAAATTACCCGAATCATTCGTTCAGT................................................ 26 0 4 0.50 2 2 0 0 0 0 0
........................................................................................CTCAAAAGGGCTTTTCGAGGATTTT.......................................................................................................................................... 25 0 4 0.50 2 0 1 1 0 0 0
........................ACGGAGATGCCATAGGAATTACACGT......................................................................................................................................................................................................... 26 0 5 0.40 2 2 0 0 0 0 0
....................................TAGGAATTACACGTCATTAGAACTGT............................................................................................................................................................................................. 26 1 5 0.40 2 0 2 0 0 0 0
.................................CCATAGGAATTACACGTCATTAGAACT............................................................................................................................................................................................... 27 0 5 0.40 2 0 2 0 0 0 0
...........................................TACACGTCATTAGAACTTTTGTAA........................................................................................................................................................................................ 24 0 5 0.40 2 0 2 0 0 0 0
...............................TGCCATAGGAATTACACGTCATTAGAACT............................................................................................................................................................................................... 29 0 5 0.40 2 2 0 0 0 0 0
......................................GGAATTACACGTCATTAGAACTT.............................................................................................................................................................................................. 23 0 5 0.40 2 2 0 0 0 0 0
..................................CATAGGAATTACACGTCATTAGAACT............................................................................................................................................................................................... 26 0 5 0.40 2 1 1 0 0 0 0
...................................ATAGGAATTACACGTCATTAGAACTTT............................................................................................................................................................................................. 27 0 5 0.40 2 2 0 0 0 0 0
.......................................GAATTACACGTCATTAGAACTTT............................................................................................................................................................................................. 23 0 5 0.40 2 1 1 0 0 0 0
.................................................................................................................CCGGAGTTAGAGGTAAGGGTCAATAACT.............................................................................................................. 28 1 3 0.33 1 1 0 0 0 0 0
...................................................................................................................TGAGTTAGAGGTAACGGTCAATAACT.............................................................................................................. 26 1 3 0.33 1 1 0 0 0 0 0
.............................................................TTGTAACTTTTATGACACGTCTTGGT.................................................................................................................................................................... 26 0 3 0.33 1 0 1 0 0 0 0
.....................................................................................................................AGTTAGAGGTAATGGTCAATAACT.............................................................................................................. 24 1 3 0.33 1 1 0 0 0 0 0
......................................................................................................................GTTAGAGGTAACGGTCAATAACTTCCT.......................................................................................................... 27 0 3 0.33 1 1 0 0 0 0 0
.................................................................................................................CCGGAGTTAGAGGTAACGGTCAATAAGT.............................................................................................................. 28 1 3 0.33 1 0 1 0 0 0 0
............................................................................................................................................................................CCACCGAAATTACCCGAATCATTCTT..................................................... 26 1 3 0.33 1 0 1 0 0 0 0
..................................................................................................................CGGAGTTAGAGGTAACGGTCAATAAGT.............................................................................................................. 27 1 3 0.33 1 0 1 0 0 0 0
....................................................................................................................GAGTTAGAGGTAACGGTCAATAA................................................................................................................ 23 0 3 0.33 1 1 0 0 0 0 0
...................................................................................................................GGAGTTAGAGTTAACGGTCAATAACT.............................................................................................................. 26 1 3 0.33 1 1 0 0 0 0 0
.................................................................................................................CCGGAGTTAGAGGTAACGGTCGATTACT.............................................................................................................. 28 2 3 0.33 1 0 1 0 0 0 0
......................................................................................................................GTTAGAGGTAACGGTCAATAACTT............................................................................................................. 24 0 3 0.33 1 1 0 0 0 0 0
.....................................................................................................................AGTTAGAGGTAACGGTCAATAAC............................................................................................................... 23 0 3 0.33 1 1 0 0 0 0 0
....................................................................................................................GAGTTAGAGGTAACGGTCAATAACTTACG.......................................................................................................... 29 2 3 0.33 1 1 0 0 0 0 0
...................................................................................................................GGAGTTAGAGGTAAGGGTCAATAACT.............................................................................................................. 26 1 3 0.33 1 1 0 0 0 0 0
..........................................................................GACACGTCTTGGTACTCAAAAGGGCT....................................................................................................................................................... 26 0 6 0.33 2 2 0 0 0 0 0
.......................................................................................................................................................................................ACCCGAATCATTCGTTCAGTAATGAAAC........................................ 28 0 3 0.33 1 1 0 0 0 0 0
...................................................................................................................GGAGTTAGAGGTAACGGTCAATAAGT.............................................................................................................. 26 1 3 0.33 1 0 1 0 0 0 0
..................................................................................................................CGGAGTTAGAGGTAAGGGTCAATAAC............................................................................................................... 26 1 3 0.33 1 1 0 0 0 0 0
.................................................................................................................CCGTAGTTAGAGGTAACGGTCAATAACT.............................................................................................................. 28 1 3 0.33 1 0 1 0 0 0 0
....................................................................................................................GAGTTAGAGGTAAGGGTCAATAACT.............................................................................................................. 25 1 3 0.33 1 1 0 0 0 0 0
............................................ACACGTCATTAGAACTTTTGTAACTTT.................................................................................................................................................................................... 27 0 4 0.25 1 1 0 0 0 0 0
..................................................................................................................................................................................AAATTACCCGAATCATTCGTTCAGT................................................ 25 0 4 0.25 1 1 0 0 0 0 0
....................................................................................................................GAGTTAGAGGTAACGGTCAAT.................................................................................................................. 21 0 4 0.25 1 1 0 0 0 0 0
...................................................................................TGGTACTCAAAAGGGCTTTTCGAGGAT............................................................................................................................................. 27 0 4 0.25 1 0 1 0 0 0 0
..................................................................................................................CGGAGTTAGAGGTAACGGT...................................................................................................................... 19 0 4 0.25 1 1 0 0 0 0 0
...........CACGTTATCTTCTACGGAGATGCCAT...................................................................................................................................................................................................................... 26 1 4 0.25 1 1 0 0 0 0 0
............................................................................................................................................................................................AATCATTCGTTCAGTAATGAAACTTA..................................... 26 0 4 0.25 1 1 0 0 0 0 0
.............................................................................................................................................................................................ATCATTCGTTCAGTAATGAAACTTAAT................................... 27 0 4 0.25 1 1 0 0 0 0 0
.............................................................................................................TTTTCCGGAGTTAGAGGTAACGGT...................................................................................................................... 24 0 4 0.25 1 1 0 0 0 0 0
..........CGACGTTATCTTCTACGGAGATGCCAT...................................................................................................................................................................................................................... 27 1 4 0.25 1 1 0 0 0 0 0
............................................ACACGTCATTAGAACTTTTGTAACTTTT................................................................................................................................................................................... 28 0 4 0.25 1 1 0 0 0 0 0
...................................................................................AGGTACTCAAAAGGGCTTTTCGAGGAT............................................................................................................................................. 27 1 4 0.25 1 1 0 0 0 0 0
.....................................................................................................................................................................................TTACCCGAATCATTCGTTCAG................................................. 21 0 4 0.25 1 1 0 0 0 0 0
..................................................................................................................CAGAGTTAGAGGTAACGGTCAATAACT.............................................................................................................. 27 1 4 0.25 1 0 1 0 0 0 0
...................................................................................................................GGAGTTAGAGGTAACGGTCAATA................................................................................................................. 23 0 4 0.25 1 1 0 0 0 0 0
...........................................CACACGTCATTAGAACTTTTGTAACT...................................................................................................................................................................................... 26 1 4 0.25 1 0 1 0 0 0 0
..............................................................................................................................................................................ACCGAAATTACCCGAATCATTCGT..................................................... 24 0 4 0.25 1 1 0 0 0 0 0
.................................................................................................................CCGGAGTTAGAGGTAACGGTCAA................................................................................................................... 23 0 4 0.25 1 1 0 0 0 0 0
......................CTACGGAGATGCCATAGGAATTACACGT......................................................................................................................................................................................................... 28 0 4 0.25 1 1 0 0 0 0 0
......................CTACGGAGATGCCATAGGAATTACA............................................................................................................................................................................................................ 25 0 4 0.25 1 0 1 0 0 0 0
......................CTACGGAGATGCCATAGGAATTAC............................................................................................................................................................................................................. 24 0 4 0.25 1 0 1 0 0 0 0
....................................................................................GGTACTCAAAAGGGCTTTTCGAGGA.............................................................................................................................................. 25 0 4 0.25 1 1 0 0 0 0 0
...............................................CGTCATTAGAACTTTTGTAACT...................................................................................................................................................................................... 22 0 4 0.25 1 0 1 0 0 0 0
...........................................................................................................................................................................................................................ATGTTGAGTAATAAAATAAAGTAAT....... 25 0 4 0.25 1 1 0 0 0 0 0
.................................................................................................................TCGGAGTTAGAGGTAACGGTCAATAAC............................................................................................................... 27 1 4 0.25 1 1 0 0 0 0 0
.............................................................................................................................................................................................................TGAAACTTAATATTATGTTGAGTAAT.................... 26 0 4 0.25 1 1 0 0 0 0 0
.................................................................................CTTGGTACTCAAAAGGGCTTTTCGAGGAT............................................................................................................................................. 29 0 4 0.25 1 0 0 0 1 0 0
...........................................................................................................................................................................................................................ATGTTGAGTAATAAAATAAAGTAATCT..... 27 0 4 0.25 1 1 0 0 0 0 0
...................................................................................................................GGAGTTAGAGGTAACGGTCAAT.................................................................................................................. 22 0 4 0.25 1 0 1 0 0 0 0
.............................................................................................................................................................................................................................GTTGAGTAATAAAATAAAGTAATC...... 24 0 4 0.25 1 1 0 0 0 0 0
....................................................................................GGTACTCAAAAGGGCTTTTCGAGGATT............................................................................................................................................ 27 0 4 0.25 1 1 0 0 0 0 0
..........................................................................................................................................................................................................................TATGTTGAGTAATAAAATAAAGTAATCT..... 28 0 4 0.25 1 1 0 0 0 0 0
...............................................................................................................................................................................CCGAAATTACCCGAATCATTCGTTCTG................................................. 27 1 4 0.25 1 0 1 0 0 0 0
...................................................................................................................................................................................AATTACCCGAATCATTCGTT.................................................... 20 0 4 0.25 1 1 0 0 0 0 0
................................................................................................................................................................................CGAAATTACCCGAATCATTCGTTCAGT................................................ 27 0 4 0.25 1 0 1 0 0 0 0
....................................TAGGAATTACACGTCATTAGAAC................................................................................................................................................................................................ 23 0 5 0.20 1 1 0 0 0 0 0
......................................GGAATTACACGTCATTAGAACTGT............................................................................................................................................................................................. 24 1 5 0.20 1 0 1 0 0 0 0
...............................CGCCATAGGAATTACACGTCATTAGAACT............................................................................................................................................................................................... 29 1 5 0.20 1 0 1 0 0 0 0
...............................TGCCATAGGAATTACACGTCATTAGAAC................................................................................................................................................................................................ 28 0 5 0.20 1 1 0 0 0 0 0
........................................................................ATGACACGTCTTGGTACTCAAAAGGGCTT...................................................................................................................................................... 29 0 5 0.20 1 1 0 0 0 0 0
.....................................AGGAATTACACGTCATTAG................................................................................................................................................................................................... 19 0 5 0.20 1 1 0 0 0 0 0
...................................ATAGGAATTACACGTCATTAGAACT............................................................................................................................................................................................... 25 0 5 0.20 1 1 0 0 0 0 0
....GATTTGTGCCGTTATCTTCTACGGA.............................................................................................................................................................................................................................. 25 1 5 0.20 1 0 0 0 0 0 1
................................GCCATAGGAATTACACGTCATTAGAACTT.............................................................................................................................................................................................. 29 0 5 0.20 1 1 0 0 0 0 0
....................................TAGGAATTACACGTCATTAGAACTCT............................................................................................................................................................................................. 26 1 5 0.20 1 1 0 0 0 0 0
......................................................AGAACTTTTGTAACTTTTA.................................................................................................................................................................................. 19 0 5 0.20 1 1 0 0 0 0 0
....................................................................................................................AAGTTAGAGGTAACGGTCAATAACT.............................................................................................................. 25 1 5 0.20 1 1 0 0 0 0 0
........................ACGGAGATGCCATAGGAATTA.............................................................................................................................................................................................................. 21 0 5 0.20 1 1 0 0 0 0 0
....................................CAGGAATTACACGTCATTAGAACTGT............................................................................................................................................................................................. 26 2 5 0.20 1 0 1 0 0 0 0
....................................TAGGAATTACACGTCATTAGAACTTTT............................................................................................................................................................................................ 27 0 5 0.20 1 1 0 0 0 0 0
.....................................AGGAATTACACGTCATTAGAACTTTTG........................................................................................................................................................................................... 27 0 5 0.20 1 1 0 0 0 0 0
.........................CGGAGATGCCATAGGAATTACACGTCAT...................................................................................................................................................................................................... 28 0 5 0.20 1 1 0 0 0 0 0
................................GCCATAGGAATTACACGTCATTAGAAC................................................................................................................................................................................................ 27 0 5 0.20 1 0 1 0 0 0 0
..................................CATAGGAATTACACGTCATTAGAACTTT............................................................................................................................................................................................. 28 0 5 0.20 1 0 1 0 0 0 0
.......................................GAATTACACGTCATTAGAACTTTTTT.......................................................................................................................................................................................... 26 1 5 0.20 1 0 1 0 0 0 0
..............................ATGCCATAGGAATTACACGTCATTAGAAC................................................................................................................................................................................................ 29 0 5 0.20 1 1 0 0 0 0 0
..................................................................................................................GGAGGTTAGAGGTAACGGTCAATAACT.............................................................................................................. 27 3 5 0.20 1 1 0 0 0 0 0
......................................GGAATTACACGTCATTAGAACT............................................................................................................................................................................................... 22 0 5 0.20 1 1 0 0 0 0 0
..................................................CATTAGAACTTTTGTAACTTTTAT................................................................................................................................................................................. 24 0 5 0.20 1 1 0 0 0 0 0
......................................GGAATTACACGGCATTAGAACTT.............................................................................................................................................................................................. 23 1 5 0.20 1 1 0 0 0 0 0
.........................................................................................................................................................................................CCGAATCATTCGTTCAGCAAT............................................. 21 1 5 0.20 1 0 1 0 0 0 0
.....................................AGGAATTACACGTCATTAGAACTGT............................................................................................................................................................................................. 25 1 5 0.20 1 0 1 0 0 0 0
.................................CCATAGGAATTACACGTCATTAGAA................................................................................................................................................................................................. 25 0 5 0.20 1 0 1 0 0 0 0
...........................................TACACGTCATTAGAACTTTTGT.......................................................................................................................................................................................... 22 0 5 0.20 1 1 0 0 0 0 0
...................................ATAGGAATTACACGTCATTAGAAC................................................................................................................................................................................................ 24 0 5 0.20 1 1 0 0 0 0 0
......................................GGAATTACACGTCATTAGAACTTTT............................................................................................................................................................................................ 25 0 5 0.20 1 1 0 0 0 0 0
.....................................................TAGAACTTTTGTAACTTTTATGACACGT.......................................................................................................................................................................... 28 0 5 0.20 1 0 1 0 0 0 0
..................................CATAGGAATTACACGTCATTAGAAC................................................................................................................................................................................................ 25 0 5 0.20 1 1 0 0 0 0 0
............................................................................CACGTCTTGGTACTCAAAAGGGCTTTT.................................................................................................................................................... 27 0 6 0.17 1 1 0 0 0 0 0
.........................................................................AAACACGTCTTGGTACTCAAAAGGGCTT...................................................................................................................................................... 28 2 6 0.17 1 1 0 0 0 0 0
...............................................................................GTCTTGGTACTCAAAAGGGCT....................................................................................................................................................... 21 0 6 0.17 1 1 0 0 0 0 0
............................................ACACGTCATTAGAACTTT............................................................................................................................................................................................. 18 0 6 0.17 1 0 1 0 0 0 0
..................................AATAGGAATTACACGTCATTAGAACT............................................................................................................................................................................................... 26 1 6 0.17 1 1 0 0 0 0 0
....................................TAGGAATTACACGTTATTAGAACTTT............................................................................................................................................................................................. 26 1 6 0.17 1 1 0 0 0 0 0
...............................TGCCATAGGAGTTACACGTCATTAGAAC................................................................................................................................................................................................ 28 1 6 0.17 1 0 0 0 1 0 0
............................................................................CACGTCTTGGTACTCAAAAGGGCTT...................................................................................................................................................... 25 0 6 0.17 1 0 1 0 0 0 0
....................................................................................GGTACTCAAAAGGGCTTTT.................................................................................................................................................... 19 0 6 0.17 1 1 0 0 0 0 0
..........................................................................GACACGTCTTGGTACTCAAAAGGGCTT...................................................................................................................................................... 27 0 6 0.17 1 1 0 0 0 0 0
..........................................................................GACACGTCTTGGTACTCAAAAGGGCTTT..................................................................................................................................................... 28 0 6 0.17 1 1 0 0 0 0 0
.....................................AGGAATTACACGTAATTAGAACTTT............................................................................................................................................................................................. 25 1 6 0.17 1 1 0 0 0 0 0
..........................................................................GACACGTCTTGGTACTCAAAAGGGC........................................................................................................................................................ 25 0 6 0.17 1 1 0 0 0 0 0
....................................TAGGCGTTACACGTCATTAGAACTTT............................................................................................................................................................................................. 26 2 6 0.17 1 1 0 0 0 0 0
.........................................................................TGACACGTCTTGGTACTCAAAAGGGCTT...................................................................................................................................................... 28 0 6 0.17 1 1 0 0 0 0 0
.....................................................................................................................................................................................................................................AAAAAATAAAGTAATCTATAA. 21 1 8 0.13 1 1 0 0 0 0 0
.........................................................................................................................................................................................CCGAATGCCTCGTTCAGTA............................................... 19 3 17 0.06 1 0 1 0 0 0 0
.......................................................................................................................................................................GAAGACCACCGAAATTACCCGAATCAGT........................................................ 28 1 20 0.05 1 0 1 0 0 0 0
......................................................................................................................................................................AGAAGACCACCGAAATTACCCGAA............................................................. 24 0 20 0.05 1 1 0 0 0 0 0
.....................................................................................................................................................................TAGAAGACCACCGAAATTACCCGAA............................................................. 25 0 20 0.05 1 1 0 0 0 0 0
...........................................................................................CAAAGGGCCTTTCGATGA.............................................................................................................................................. 18 3 20 0.05 1 0 0 0 0 0 1
..GTGATTTGTGACGTTATCTT..................................................................................................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0 0 0
...................................................................................................................................................................GGTAGAAGACCACCGAAATTACCCGAAT............................................................ 28 0 20 0.05 1 0 1 0 0 0 0
....................................................................................................................................................................GTAGAAGACCACCGAAATTAC.................................................................. 21 0 20 0.05 1 0 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6541:370873-371123 + dmo_2195 GGCACTAAACACTGCAATAGAAGATGCCTCTACGGTATCCTTAATGTGCAGTAATCTTGAAAACATTGAAAATACTG--TGCAGAACCATGAGTTT-TCCCGAAAAGCTCCTAAAAGGCCTCAATCTCCATTGCCAGTTATTGAAGGAGCAACACATGCAACTTTACCATCTTCTGGTGGCTTTAATGGG--CTTAGTAAGC-AAGTCATTACTTTGAATTATAATACAACTCATTA-----TTTTATTTCATTAGATATTA
droWil2 scf2_1100000004875:18104-18356 + GGCACTTAACACTGCATTAGAAGATGTCTCTACTGTATCCTTAATGTGCAGTAATATTGAAAACAATGAAAATACTG--TGCACAGCCATGAGCCT-TCCCGAAAAACTCGTAAGAGGCCTCGATCACCATTGCCAGTTATTGAAGGAGCAACACCTGTATCTTTACCGTCTTCTGGTGGTTTTAATGGG--CTTGGTAAGC-AAATCATTACTTTGATTTGTAATACAACTCATTAATTTAT---TTATGAATAGGTATTG
dp5 Unknown_group_82:5761-5985 - AGCTCTGACCACTGCTTTAAAGGATGCTGATACCGTTTCATTTATGGACACTAATGTTGAAAATTTGCAAAATATAG--TACA---ATCTAAGTCT-ACCCGGGAAACCGTAAAAAGGCCTAGATCGCCATTGACAACTATTGAAGAT------------------------TCTGGTGGCTTCAATGGT--TTTGGTAAGC-AAA-CATAATTGCAATATGTTAAACAAGTGAGTAATTAATT---TATGTATAGGTATTG
droPer2 scaffold_144:3663-3887 + AGCTCTGACCACTGCTTTAAAGGATGCTGATACCGTTTCATTTATGGACACTAATGTTGAAAATTTGCAAAATATAG--TACA---ATCTAAGTCT-ACACGGGAAACCGTAAAAAGGCCTAGATCGCCATTGACAACTATTGAAGAT------------------------TCTGGTGGCTTCAATGGT--TTTGGTAAGC-AAA-CATAATTGCGATATGTTAAACAAGTGAGTAATTAATT---TATGTATAGGTATTG
droAna3 scaffold_12984:68810-69065 + TGCTCTTAATTCTGCGTTAGAGGATGCTGAAACTATATCATTTATTGAAAGTAATGTTGAAAATGTCCAAAACAATG--CACAAAAAGCTGAGACT-TCCCAGAGAACTGAAAAAAGACCGCGATCACCATTACCAATCAGTGAAGATTCGGCGTGCGCATCTCCGCCAAATTCGGGTGGATTCAATGGA--GCTGGTAAACCAAA-TTTAATTGCTATGTGTTACTTTTGTGAATAATTAGTTTTTTTTACACAGGTATTG
droBip1 scf7180000393438:11031-11285 - AGCTCTAAACGCTGCATTAGAGGAAGCCGATTCTGTCTCTTTTATAGTTGGCAATAAGGAAAATGTTTTAAATAGTG--CCCAGGATCCTAAGTCT-ACTGGAAAGGCTACAAAACGTCCTCGATCGCCATTGCCAACTATAGAAGATTCGGGATGCGAATATTTACCAAATTCTGGAGGATTTAATGCT--GCTGGTAAAC-AAA-TATAACTGAGATTTTTTATATAAGTGATTAATAATTTATATATGGGTAGGTCTTG
droKik1 scf7180000301802:5733-5983 + ATCA-TTAACACGGCATTGGAGGACGCCGAAACTATTTCATTTATCGACAATAACGCTGATAATGTCAAAGATAATG--TACAGGA-GCTGGAAATTACCAAAAATCCTGCAAAGAGACCTCGTTCACCACTGCCGATAAAGGAATATTCAGTGTGTACATCTGAGCCTTTTTCTGGTGGTTTCAATTGT--GCCGGTAAGA-AAA-CTAAATTATATAATGGTACTCAAATAACTAATTAATT---TATTAACAGATGTTG
droFic1 scf7180000453162:3923-4177 + GGCTCTAAATACTGCATTAGAGGATGCGGAGGCTATATAATTTATTGAGAGTAATGTTGAAAATGTCCAAAACAATG--CACAGAAAGCTGAGACA-TCCCAGAAAGCTGCGAAAAGGCCGCGATCACCATTACCAATCAGTGAAGATTCGGCGTGCGCATCTCCGCCAACTGCTGGTGGGTTCAATGGA--GCTGGTAAGCCAAA-TTTAATTGCTAC-TGGTATTTTAGTGTACAATTAGTTTTATTTACACAGGTATTG
droRho1 scf7180000765007:7907-8161 + GGCTCTTAGTACTGCATTAGAGGATACGGAGACTGTATCATTTATTGAGAGTAATGTTGAAAATGTCA-AAATGTTATACACAAAAAGCTGAGACT-TCCCAGAAAACTGCAAAAAGGCCGCGATCACCATTACCAATCTGTGAAGATTCGGCGTGCGCATCTCCGCCAACTTTTGGTAGGTTCAATGCA--GCTGGTAAGCCAAA-TTTAATTGC--TGTGTTATTTTAGTGAATAATTAGTTTTATTTACACAGGTACTG
droBia1 scf7180000301342:31085-31333 - GGCTCTTAATACTGACTTAGAAGATGCTTAGACTATATCATTTATTGAAACTAATGTTGAAAATGTCCCAAACCATG--CACAGGAAGCTGAGACT-TCCCAGAAAACTCCGAAAAGGCCGCAATCACCATTACCAATCATTGAAGATTCGGCGTGCCCATCTCCGCCAACTTCTGGAGGTTTCAATGAA--GCTGCTAA-----A-TTTAATTGC--TGTGTTATTTTTGTGAATAATTGGTTTTATTTACACAGGTATTG
droTak1 scf7180000410708:7422-7673 - GGCTCTTAATACTGCATTAGAGGATGCTGAGACCATATCATTTATTGAGAGTAATGTTGAAAATGTCCCAAACAATG--CACAGGAAGCTGAGACT-TCCCAGAAAACTCCGAAAAGGCCGCGATCACCATTACCAATCATTGAAGATTCGG------CATCTCCGCCAACTTCTGGTGGGTTCAATGGTGGGCTGGTAAGCTAAA-TTTAATTGCTATGTGGTATTTTTGTGAATAAGTAGTTTTATTTACTCAGGTATTG
droEug1 scf7180000409745:3445-3699 - AGCTCTAAACGCTGCATTAGAGGAAGCCGATTCTGTCTCTTTTATAGTTGGCAATAAGGAAAATGTTTTAAATAGTG--CCCAGGATCCTAAGTCT-ACTGGAAAGGCTACAAAACGTCCTCGATCGCCATTGCCAACTATAGAAGATTCGGGATGCGAATATTTACCAAATTCTGGAGGATTTAATGCT--GATGGTAAAC-AAA-TATAACTGAGATTTTTTATATAAGTGATTAATAATTTATATATGGGTAGGTCTTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
GGCACTAAACACTGCAATAGAAGATGCCTCTACGGTATCCTTAATGTGCAGTAATCTTGAAAACATTGAAAATACTG--TGCAGAACCATGAGTTT-TCCCGAAAAGCTCCTAAAAGGCCTCAATCTCCATTGCCAGTTATTGAAGGAGCAACACATGCAACTTTACCATCTTCTGGTGGCTTTAATGGG--CTTAGTAAGC-AAGTCATTACTTTGAATTATAATACAACTCATTA-----TTTTATTTCATTAGATATTASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.GCACTAAACACTGCAATAGAAGATGCC..........................................................................................................................................................................................................................................2756.803419000150
......................................................................................................................................CAGTTATTGAAGGAGCAACACATGCAAC....................................................................................................2815.005200030
...........................................................AAAACATTGAAAATACTG--TGCAGAACC..............................................................................................................................................................................2732.337400030
......................................................................................................................................CAGTTATTGAAGGAGCAACACATGC.......................................................................................................2512.002000011
....................................................AATCTTGAAAACATTGAAAATACTG--.......................................................................................................................................................................................2551.407700000
.GCACTAAACACTGCAATAGAAGATG............................................................................................................................................................................................................................................2561.338800000
......................................................................................................................................CAGTTATTGAAGGAGCAACACATGCAACT...................................................................................................2911.001100000
.......................................................................................................................................AGTTATTGAAGGAGCAACACATG........................................................................................................2311.001100000
.......................................................................................................................................AGTTATTGAAGGAGCAACACATGCAAC....................................................................................................2711.001100000
............................................................................................................................................TTGAAGGAGCAACACATGCAACTTT.................................................................................................2511.001100000
......................................................................................................................................CAGTTATTGAAGGAGCAACACATG........................................................................................................2411.001000001
....................................................AATCTTGAAAACATTGAAAATACT..........................................................................................................................................................................................2450.804400000
...........................................................AAAACATTGAAAATACTG--TGCAGAACCA.............................................................................................................................................................................2830.672200000
.GCACTAAACACTGCAATAGAAGATGCCTC........................................................................................................................................................................................................................................2950.603200010
....................................................AATCTTGAAAACATTGAAAATACTG--T......................................................................................................................................................................................2650.402100010
....................................................AATCTTGAAAACATTGAAAATACTG--TGC....................................................................................................................................................................................2850.402200000
..........................................................GAAAACATTGAAAATACTG--TGCAGAACCA.............................................................................................................................................................................2930.331100000
..............................................................ACATTGAAAATACTG--TGCAGAACC..............................................................................................................................................................................2430.331000010
.GCACTAAACACTGCAATAGAAGATGC...........................................................................................................................................................................................................................................2660.332200000
......................................................................................................................................CAGTTATTGAAGGAGCAACACAT.........................................................................................................2360.332100010
............................................................AAACATTGAAAATACTG--TGCAGAACC..............................................................................................................................................................................2630.331000010
...................................................................................................................................................................................................................................CAACTCATTA-----TTTTATTTCATTAGATAT..2840.251100000
...................................................................................................................................................................................................................................CAACTCATTA-----TTTTATTTCATTAGATA...2740.251100000
...............................................................................................T-TCCCGAAAAGCTCCTAAAAGGCC..............................................................................................................................................2440.251000010
.................................................................................................TCCCGAAAAGCTCCTAAAAGGCC..............................................................................................................................................2340.251000010
..............................................................................................TT-TCCCGAAAAGCTCCTAAAAGGCC..............................................................................................................................................2540.251100000
.GCACTAAACACTGCAATAGAAGATGCCC.........................................................................................................................................................................................................................................2850.201000010
.GCACTAAACACTGCAATAGAAGATGCCT.........................................................................................................................................................................................................................................2850.201000010
.......................................................CTTGAAAACATTGAAAATACTG--TGC....................................................................................................................................................................................2550.201100000
..................................................GTAATCTTGAAAACATTGAAAATACTG--.......................................................................................................................................................................................2750.201100000
..CACTAAACACTGCAATAGAAGATGCC..........................................................................................................................................................................................................................................2650.201100000
...........................................................AAAACATTGAAAATACTG--TGCAGA.................................................................................................................................................................................2450.201100000
....................................................AATCTTGAAAACATTGAAAATACTG--TG.....................................................................................................................................................................................2750.201100000
..CACTAAACACTGCAATAGAAGATG............................................................................................................................................................................................................................................2460.171100000
......................................................................................................................................CAGTTATTGAAGGAGCAACACA..........................................................................................................2260.171100000
................................................................................................................................................................................................CTTAGTAAGC-AAGTCATTACT................................................2160.171100000
.GCACTAAACACTGCAATAGAAGAT.............................................................................................................................................................................................................................................24200.153300000
......................................................................................................................................CAGTTATTGAAGGAGCAAC.............................................................................................................1980.131000001
droWil2
GGCACTTAACACTGCATTAGAAGATGTCTCTACTGTATCCTTAATGTGCAGTAATATTGAAAACAATGAAAATACTG--TGCACAGCCATGAGCCT-TCCCGAAAAACTCGTAAGAGGCCTCGATCACCATTGCCAGTTATTGAAGGAGCAACACCTGTATCTTTACCGTCTTCTGGTGGTTTTAATGGG--CTTGGTAAGC-AAATCATTACTTTGATTTGTAATACAACTCATTAATTTAT---TTATGAATAGGTATTGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
............................................................................................................................................................TGTATCTTTACCGTCTTCTGGTGG..................................................................................24200.20404000
.............................................................AACAATGAAAATACTG--TGCACAGCCA.............................................................................................................................................................................2660.17101000
..................................................................TGAAAATACTG--TGCACAGCCATGAGCC.......................................................................................................................................................................2760.17100010
.......................................................................ATACTG--TGCACAGCCATGAGCCT-.....................................................................................................................................................................2360.17101000
.............................................................AACAATGAAAATACTG--TGCACA.................................................................................................................................................................................2260.17101000
.................TAGAAGATGTCTCTACTGTATCCT.............................................................................................................................................................................................................................24170.12202000
.......................................................................................................AAAACTCGTAAGAGGCCTCGATCACCAT...................................................................................................................................28200.10201010
.....................................................................................................................GCCTCGATCACCATTGCCAGTTAT.........................................................................................................................24200.10202000
......................................................................................................................................................AACACCTGTATCTTTACCGTCTTCTGG.....................................................................................27200.10211000
............................................................................................................................TCACCATTGCCAGTTATTGAAGGAGC................................................................................................................26200.10200020
.GCACTTAACACTGCATTAGAAGATGTC..........................................................................................................................................................................................................................................27200.10202000
......................................................................................................................................................AACACCTGTATCTTTACCGTCTTCTG......................................................................................26200.10202000
.......................................................................................................AAAACTCGTAAGAGGCCTCGATCA.......................................................................................................................................24200.10202000
...............................................................................................................................................................................GGTGGTTTTAATGGG--CTTGGTAT..............................................................23100.10100010
....................................................................................................................................................................TACCGTCTTCTGGTGGTTTTAATGGG--......................................................................26110.09100010
............................................................................................................................................................TGTATCTTTACCGTCTTCTGGTGGT.................................................................................25130.08101000
.................TAGAAGATGTCTCTACTGTATCCTTAATG........................................................................................................................................................................................................................29140.07101000
....................AAGATGTCTCTACTGTATCCTTAATG........................................................................................................................................................................................................................26140.07101000
..CACTTAACACTGCATTAGAAGATGTC..........................................................................................................................................................................................................................................26200.05101000
.........CACTGCATTAGAAGATGTCTCTACTG...................................................................................................................................................................................................................................26200.05101000
.....................................................................................................................................CCAGTTATTGAAGGAGCAACACC..........................................................................................................23200.05100100
.......................................................................................................AAAACTCGTAAGAGGCCTCGATCAC......................................................................................................................................25200.05101000
...............................................................................................................................................AAGGAGCAACACCTGTATCTTTACCG.............................................................................................26200.05101000
.............................................................................................................................................TGAAGGAGCAACACCTGTATCTTT.................................................................................................24200.05101000
..........ACTGCATTAGAAGATGTCTCTAC.....................................................................................................................................................................................................................................23200.05101000
..........................................................................................................................................................................................TGGG--CTTGGTAAGC-AAATCATTACTT...............................................26200.05101000
.................................TGTATCCTTAATGTGCAGTAATAT.............................................................................................................................................................................................................24200.05100010
......................................................................................................................................................................................TTAATGGG--CTTGGTAAGC-AAA........................................................21200.05100010
............................................................................................................................................................TGTATCTTTACCGTCTTCTGGTG...................................................................................23200.05101000
...........................................................................................................................................................CTGTATCTTTACCGTCTTCTGG.....................................................................................22200.05110000
........................................TTAATGTGCAGTAATATTGAA.........................................................................................................................................................................................................21200.05100010
...........................................ATGTGCAGTAATATTGAAAACAA....................................................................................................................................................................................................23200.05100010
.......................................................................................................AAAACTCGTAAGAGGCCTCGATCACC.....................................................................................................................................26200.05101000
........................................................................................................................TCGATCACCATTGCCAGTTATTGAAGGA..................................................................................................................28200.05101000
..........................................................................................................ACTCGTAAGAGGCCTCGATCACCA....................................................................................................................................24200.05101000
......................................................................................................................................CAGTTATTGAAGGAGCAACACCT.........................................................................................................23200.05101000
.........................................................................................................................................................ACCTGTATCTTTACCGTCTTCTGG.....................................................................................24200.05101000
.........................................................................................TGAGCCT-TCCCGAAAAACTC........................................................................................................................................................20200.05100010
.............................................................................................................................................TGAAGGAGCAACACCTGTATCTTTACCG.............................................................................................28200.05101000
......TAACACTGCATTAGAAGATGT...........................................................................................................................................................................................................................................21200.05101000
..............................TACTGTATCCTTAATGTGCAGT..................................................................................................................................................................................................................22200.05100010
...............................................................................................T-TCCCGAAAAACTCGTAAGAGGCCTC............................................................................................................................................26200.05101000
..........................................................................................................................................................CCTGTATCTTTACCGTCTTCTGG.....................................................................................23200.05101000
.GCACTTAACACTGCATTAGAAGATG............................................................................................................................................................................................................................................25200.05101000
......................................................................................................................................................AACACCTGTATCTTTACCGTCTTC........................................................................................24200.05101000
.................................TGTATCCTTAATGTGCAGTAATATTG...........................................................................................................................................................................................................26200.05100010
..........................................................................................................................................TATTGAAGGAGCAACACCTGTAT.....................................................................................................23200.05101000
..........................................................................................................ACTCGTAAGAGGCCTCGATCACCAT...................................................................................................................................25200.05101000
.........CACTGCATTAGAAGATGTCTCTAC.....................................................................................................................................................................................................................................24200.05101000
........................................................................................................................TCGATCACCATTGCCAGTTATTG.......................................................................................................................23200.05101000
.GCACTTAACACTGCATTAGAAGATGTCTC........................................................................................................................................................................................................................................29200.05101000
........................................................................................................................TCGATCACCATTGCCAGTTATTGAAGG...................................................................................................................27200.05101000
.............................................................................................................................CACCATTGCCAGTTATTGAAGGAGC................................................................................................................25200.05100010
dp5
AGCTCTGACCACTGCTTTAAAGGATGCTGATACCGTTTCATTTATGGACACTAATGTTGAAAATTTGCAAAATATAG--TACA---ATCTAAGTCT-ACCCGGGAAACCGTAAAAAGGCCTAGATCGCCATTGACAACTATTGAAGAT------------------------TCTGGTGGCTTCAATGGT--TTTGGTAAGC-AAA-CATAATTGCAATATGTTAAACAAGTGAGTAATTAATT---TATGTATAGGTATTGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................................................................TTGACAACTATTGAAGAT------------------------TCTGG.....................................................................................23674.17445032220312103120
..................................................................................................................................TTGACAACTATTGAAGAT------------------------TCTG......................................................................................22614.0084059000002320
..................................................................................................................................TTGACAACTATTGAAGAT------------------------TCTGGT....................................................................................2469.505704730001510
..................................................................................................................................TTGACAACTATTGAAGAT------------------------TCTGGTG...................................................................................2565.833503020000300
...................................................................................................................................TGACAACTATTGAAGAT------------------------TCTGG.....................................................................................2264.002402300000010
..................................................................................................................................TTGACAACTATTGAAGAT------------------------TCTGGTGG..................................................................................2653.801901600000300
............................................................................................................................................................................................................................TGTTAAACAAGTGAGTAATTAATT---...............2433.0090410000400
............................................TGGACACTAATGTTGAAAATTTGC..................................................................................................................................................................................................2433.0090100000800
..................................................................................................................................TTGACAACTATTGAAGAT------------------------TCTGGTGGC.................................................................................2752.20110710000300
............................................TGGACACTAATGTTGAAAATTTGCA.................................................................................................................................................................................................2532.0060100000500
..................................................................................................................................TTGACAACTATTGAAGAT------------------------TCT.......................................................................................2161.67100900100000
..................................................................................................................................TTGACAACTATTGAAGAT------------------------TC........................................................................................2061.1770520000000
...................................................................................................................................TGACAACTATTGAAGAT------------------------TCTGGT....................................................................................2361.0060600000000
............................................TGGACACTAATGTTGAAAATTTG...................................................................................................................................................................................................2331.0030100000110
...................................................................................................................................TGACAACTATTGAAGAT------------------------TCTG......................................................................................2161.0060600000000
............................................................................................................................................................................................................................TGTTAAACAAGTGAGTAATTAAAC---...............2430.6720000000200
.......................................................................................TCTAAGTCT-ACCCGGGAAACCGTAAAA...................................................................................................................................................2750.6030200001000
.........................................................................................................................................CTATTGAAGAT------------------------TCTGGTGGC.................................................................................2050.6030000000300
............................................TGGACACTAATGTTGAAA........................................................................................................................................................................................................1840.5020000000200
..................................................................................................................................TTGACAACTATTGAAGAT------------------------TCTGGC....................................................................................2460.5030120000000
..................................................................................................................................TTGACAACTATTGAAGAT------------------------TCTGGA....................................................................................2460.5030300000000
..................................................................................................................................TTGACAACTATTGAAGAT------------------------TCA.......................................................................................2160.5030000000300
........................................................................................CTAAGTCT-ACCCGGGAAAC..........................................................................................................................................................1950.4020200000000
.........................................................................................TAAGTCT-ACCCGGGAAACCGTAAAA...................................................................................................................................................2550.4020200000000
.............................................................................................TCT-ACCCGGGAAACCGTAAAAAGGC...............................................................................................................................................2550.4020200000000
.......................................................................................TCTAAGTCT-ACCCGGGAAACCGTAA.....................................................................................................................................................2550.4020110000000
..................................................................................................................................TTGACAACTATTGAAGAT------------------------TCTGGTGGCT................................................................................2850.4020200000000
..........................................................................................................................................TATTGAAGAT------------------------TCTGGTGGC.................................................................................1950.4020000000020
........................................................................................CTAAGTCT-ACCCGGGAAACCGTA......................................................................................................................................................2350.4020200000000
.............................................................................................................................................................................................................................GTTAAACAAGTGAGTAATTAATT---...............2330.3310100000000
...........................................ATGGACACTAATGTTGAAAATTTG...................................................................................................................................................................................................2430.3310000000100
...................................................................................................................................TGACAACTATTGAAGAT------------------------TCTGGTG...................................................................................2460.3320200000000
............................................................................................................................................................................................................................TGTTAAACAAGTGAGTAATTAA....................2230.3310100000000
..................................................................................................................................TTGACAACTATTGAAGAT------------------------TCTGT.....................................................................................2360.3320100001000
............................................................................................................................................................................................GT--TTTGGTAAGC-AAA-CATAATTGC..............................................2440.2510100000000
..........................................................................................................................................................................................TGGT--TTTGGTAAGC-AAA-CATA...................................................2140.2510100000000
.......................................................................................................................................................................................CAATGGT--TTTGGTAAGC-AAA-CA.....................................................2240.2510100000000
..............................................................................................................................................................................TGGTGGCTTCAATGGT--TTTGGTAAGC-T..........................................................2740.2510100000000
.....................................................................................................................................................................................TTCAATGGT--TTTGGTAAGC-AAA-CATAAT.................................................2840.2510100000000
..................................................................................A---ATCTAAGTCT-ACCCGGGAAA...........................................................................................................................................................2150.2010100000000
................................................................................ACA---ATCTAAGTCT-ACCCGGGA.............................................................................................................................................................2150.2010100000000
................................................................................ACA---ATCTAAGTCT-ACCCGGGAAACCG........................................................................................................................................................2650.2010000001000
.......................................................................................TCTAAGTCT-ACCCGGGAAACCG........................................................................................................................................................2250.2010100000000
........................................................................................CTAAGTCT-ACCCGGGAAACCGTAAA....................................................................................................................................................2550.2010100000000
...................................................................................................................................TGACAACTATTGAAGAT------------------------TCTGGTGG..................................................................................2550.2010100000000
.......................................................................................TCTAAGTCT-ACCCGGGAAACCGT.......................................................................................................................................................2350.2010100000000
.......................................................................................TCTAAGTCT-ACCCGGGAAACCGTA......................................................................................................................................................2450.2010100000000
.........................................................................................TAAGTCT-ACCCGGGAAACCGTA......................................................................................................................................................2250.2010100000000
..................................................................................................................................................AT------------------------TCTGGTGGCTTCAATGGT--......................................................................2050.2010100000000
.......................................................................................................................................AACTATTGAAGAT------------------------TCTGGTGGC.................................................................................2250.2010100000000
..........................................................................................................................................TATTGAAGAT------------------------TCTGGTGGCTT...............................................................................2150.2010100000000
......................................................................................................................................CAACTATTGAAGAT------------------------TCTGGTGGCTTC..............................................................................2650.2010100000000
...........................................................................................................................................ATTGAAGAT------------------------TCTGGTGGCTTC..............................................................................2150.2010100000000
...........................................................................................................................................ATTGAAGAT------------------------TCTGGTGGCTT...............................................................................2050.2010100000000
..........................................................................................................................................TATTGAAGAT------------------------TCTGGTGG..................................................................................1850.2010100000000
........................................................................................CTAAGTCT-ACCCGGGAAACCGTAA.....................................................................................................................................................2450.2010100000000
..................................................................................................................................TTGACAACTATTGAAGAT------------------------TCTGGTA...................................................................................2560.1710100000000
........................................................................................................................................ACTATTGAAGAT------------------------TCTGGT....................................................................................1860.1710100000000
..................................................................................................................................TTGACAACTATTGAAGAT------------------------TCTA......................................................................................2260.1710100000000
..................................................................................................................................TTGACAACTATTGAAGAT------------------------T.........................................................................................1960.1710100000000
........................................................................................................AAACCGTAAAAAGGCCTAGATCGC......................................................................................................................................2460.1710100000000
....................................................................................................................................GACAACTATTGAAGAT------------------------TCTG......................................................................................2060.1710000000100
......................................................................................................GGAAACCGTAAAAAGGCCTAGATA........................................................................................................................................2460.1710100000000
.........................................................................................................AACCGTAAAAAGGCCTAGATCGC......................................................................................................................................2360.1710100000000
...............................................................................................T-ACCCGGGAAACCGTAAAAAGGCCTAG...........................................................................................................................................2760.1710100000000
..............................................................................................................TAAAAAGGCCTAGATCGCCATTGACA..............................................................................................................................2660.1710100000000
..................................................................................................................................TTGACAACTATTGAAGAT------------------------TCTGAAA...................................................................................2560.1710100000000
............................................................................................................CGTAAAAAGGCCTAGATCGCC.....................................................................................................................................2160.1710100000000
droPer2
AGCTCTGACCACTGCTTTAAAGGATGCTGATACCGTTTCATTTATGGACACTAATGTTGAAAATTTGCAAAATATAG--TACA---ATCTAAGTCT-ACACGGGAAACCGTAAAAAGGCCTAGATCGCCATTGACAACTATTGAAGAT------------------------TCTGGTGGCTTCAATGGT--TTTGGTAAGC-AAA-CATAATTGCGATATGTTAAACAAGTGAGTAATTAATT---TATGTATAGGTATTGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..................................................................................................................................TTGACAACTATTGAAGAT------------------------TCTGGT....................................................................................2432.006230001
..................................................................................................................................TTGACAACTATTGAAGAT------------------------TCTGG.....................................................................................2331.334022000
..................................................................................................................................TTGACAACTATTGAAGAT------------------------TCTGGTGG..................................................................................2631.003020001
..................................................................................................................................TTGACAACTATTGAAGAT------------------------TCTGGTGGC.................................................................................2730.672020000
..................................................................................................................................TTGACAACTATTGAAGAT------------------------TCTGGTG...................................................................................2530.331010000
..................................................................................................................................TTGACAACTATTGAAGAT------------------------TCTGGCA...................................................................................2530.331010000
........................................................................................................................TAGATCGCCATTGACAACTATTGAAG....................................................................................................................2630.331010000
............................................................................................................................................................................TCTGGTGGCTTCAATGGT--TTTG..................................................................2240.251010000
droAna3
TGCTCTTAATTCTGCGTTAGAGGATGCTGAAACTATATCATTTATTGAAAGTAATGTTGAAAATGTCCAAAACAATG--CACAAAAAGCTGAGACT-TCCCAGAGAACTGAAAAAAGACCGCGATCACCATTACCAATCAGTGAAGATTCGGCGTGCGCATCTCCGCCAAATTCGGGTGGATTCAATGGA--GCTGGTAAACCAAA-TTTAATTGCTATGTGTTACTTTTGTGAATAATTAGTTTTTTTTACACAGGTATTGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................ACTGAAAAAAGACCGCGATCACCATT..................................................................................................................................2612.002200000
.....TTAATTCTGCGTTAGAGGATGCTGA........................................................................................................................................................................................................................................2511.001100000
........................................................................................................GAACTGAAAAAAGACCGCGATCACC.....................................................................................................................................2511.001100000
...........................................................................TG--CACAAAAAGCTGAGACT-TCCCA................................................................................................................................................................2411.001100000
......................................................................................................GAGAACTGAAAAAAGACCGCGATCACC.....................................................................................................................................2711.001100000
.......................................................................................................AGAACTGAAAAAAGACCGCGATCACC.....................................................................................................................................2611.001010000
..........................................................................................................ACTGAAAAAAGACCGCGATCACCAT...................................................................................................................................2511.001100000
........................................................................................................GAACTGAAAAAAGACCGCGATCACCATTA.................................................................................................................................2911.001100000
......................................................................................................GAGAACTGAAAAAAGACCGCGATCAC......................................................................................................................................2611.001100000
..............................................GAAAGTAATGTTGAAAATGTGA..................................................................................................................................................................................................2211.001000001
............................................................................................................................................GTGAAGATTCGGCGTGCGCATC....................................................................................................2250.402020000
.......................................................................................................................................AATCAGTGAAGATTCGGCG............................................................................................................1950.201100000
...........................................................................................................................................................................................GGA--GCTGGTAAACCAAA-TTTAATTGC..............................................2650.201100000
......................................................................................................................................................................................TCAATGGA--GCTGGTAAACCAAA-TTT....................................................2550.201100000
.........................................................................................................................................TCAGTGAAGATTCGGCGTGCGCATC....................................................................................................2550.201010000
.........................................................................................................................................TCAGTGAAGATTCGGCGTGCGCAT.....................................................................................................2450.201000010
.......................................................................................................................................AATCAGTGAAGATTCGGCGTGC.........................................................................................................2250.201100000
......................................................................................................................................CAATCAGTGAAGATTCGGCGT...........................................................................................................2150.201010000
.........................................................................................................................................TCAGTGAAGATTCGGCGTGCGCATCT...................................................................................................2650.201100000
.........................................................................................................................................TCAGTGAAGATTCGGCGTGCGCATCTC..................................................................................................2750.201100000
.....................................................................................................................................CCAATCAGTGAAGATTCGGCG............................................................................................................2150.201100000
.......................................................................................................................................AATCAGTGAAGATTCGGCGTGCGT.......................................................................................................2450.201100000
..........................................................................................................................................................................................TGGA--GCTGGTAAACCAAA-TTTAATTGC..............................................2750.201100000
...........................................................................................................................................................................................GGA--GCTGGTAAACCAAA-TTTAATTG...............................................2550.201100000
..................................................................................................................................TTACCAATCAGTGAAGATTCGGCGTG..........................................................................................................2650.201001000
droBip1
AGCTCTAAACGCTGCATTAGAGGAAGCCGATTCTGTCTCTTTTATAGTTGGCAATAAGGAAAATGTTTTAAATAGTG--CCCAGGATCCTAAGTCT-ACTGGAAAGGCTACAAAACGTCCTCGATCGCCATTGCCAACTATAGAAGATTCGGGATGCGAATATTTACCAAATTCTGGAGGATTTAATGCT--GCTGGTAAAC-AAA-TATAACTGAGATTTTTTATATAAGTGATTAATAATTTATATATGGGTAGGTCTTGSizeHit CountTotal NormTotal
No Reads
droKik1
ATCA-TTAACACGGCATTGGAGGACGCCGAAACTATTTCATTTATCGACAATAACGCTGATAATGTCAAAGATAATG--TACAGGA-GCTGGAAATTACCAAAAATCCTGCAAAGAGACCTCGTTCACCACTGCCGATAAAGGAATATTCAGTGTGTACATCTGAGCCTTTTTCTGGTGGTTTCAATTGT--GCCGGTAAGA-AAA-CTAAATTATATAATGGTACTCAAATAACTAATTAATT---TATTAACAGATGTTGSizeHit CountTotal NormTotal
No Reads
droFic1
GGCTCTAAATACTGCATTAGAGGATGCGGAGGCTATATAATTTATTGAGAGTAATGTTGAAAATGTCCAAAACAATG--CACAGAAAGCTGAGACA-TCCCAGAAAGCTGCGAAAAGGCCGCGATCACCATTACCAATCAGTGAAGATTCGGCGTGCGCATCTCCGCCAACTGCTGGTGGGTTCAATGGA--GCTGGTAAGCCAAA-TTTAATTGCTAC-TGGTATTTTAGTGTACAATTAGTTTTATTTACACAGGTATTGSizeHit CountTotal NormTotal
No Reads
droRho1
GGCTCTTAGTACTGCATTAGAGGATACGGAGACTGTATCATTTATTGAGAGTAATGTTGAAAATGTCA-AAATGTTATACACAAAAAGCTGAGACT-TCCCAGAAAACTGCAAAAAGGCCGCGATCACCATTACCAATCTGTGAAGATTCGGCGTGCGCATCTCCGCCAACTTTTGGTAGGTTCAATGCA--GCTGGTAAGCCAAA-TTTAATTGC--TGTGTTATTTTAGTGAATAATTAGTTTTATTTACACAGGTACTGSizeHit CountTotal NormTotal
No Reads
droBia1
GGCTCTTAATACTGACTTAGAAGATGCTTAGACTATATCATTTATTGAAACTAATGTTGAAAATGTCCCAAACCATG--CACAGGAAGCTGAGACT-TCCCAGAAAACTCCGAAAAGGCCGCAATCACCATTACCAATCATTGAAGATTCGGCGTGCCCATCTCCGCCAACTTCTGGAGGTTTCAATGAA--GCTGCTAA-----A-TTTAATTGC--TGTGTTATTTTTGTGAATAATTGGTTTTATTTACACAGGTATTGSizeHit CountTotal NormTotal
No Reads
droTak1
GGCTCTTAATACTGCATTAGAGGATGCTGAGACCATATCATTTATTGAGAGTAATGTTGAAAATGTCCCAAACAATG--CACAGGAAGCTGAGACT-TCCCAGAAAACTCCGAAAAGGCCGCGATCACCATTACCAATCATTGAAGATTCGG------CATCTCCGCCAACTTCTGGTGGGTTCAATGGTGGGCTGGTAAGCTAAA-TTTAATTGCTATGTGGTATTTTTGTGAATAAGTAGTTTTATTTACTCAGGTATTGSizeHit CountTotal NormTotal
No Reads
droEug1
AGCTCTAAACGCTGCATTAGAGGAAGCCGATTCTGTCTCTTTTATAGTTGGCAATAAGGAAAATGTTTTAAATAGTG--CCCAGGATCCTAAGTCT-ACTGGAAAGGCTACAAAACGTCCTCGATCGCCATTGCCAACTATAGAAGATTCGGGATGCGAATATTTACCAAATTCTGGAGGATTTAATGCT--GATGGTAAAC-AAA-TATAACTGAGATTTTTTATATAAGTGATTAATAATTTATATATGGGTAGGTCTTGSizeHit CountTotal NormTotal
No Reads

Generated: 05/18/2015 at 02:07 AM