ID:

dmo_216

 Coordinate:

scaffold_3682:3879-3930 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.7 -12.4 -12.1

Flybase annnotation

intergenic

No Repeatable elements found

mature
  1. scaffold_598:1334-1360 +
  2. scaffold_3100:1203-1229 +
  3. dmo_216  scaffold_3682:3904-3930 +
  4. scaffold_3784:7743-7769 +
  5. scaffold_3952:501-527 +
  6. scaffold_4746:6948-6974 +
  7. scaffold_5002:2388-2414 +
  8. scaffold_5055:837-863 +
  9. scaffold_5834:708-734 +
  10. scaffold_6262:66082-66108 +
  11. scaffold_6425:15050-15076 +
  12. scaffold_6427:1115-1141 +
  13. scaffold_6471:3174-3200 +
  14. scaffold_6482:284652-284678 +
  15. scaffold_6498:1723157-1723183 +
  16. scaffold_6498:2350878-2350904 +
  17. scaffold_6540:1435116-1435142 +
  18. scaffold_6540:23449706-23449732 +
  19. scaffold_6540:31811086-31811112 +
  20. scaffold_6680:24241533-24241559 +
  21. scaffold_359:637-663 +
  22. scaffold_1618:738-764 +
  23. scaffold_1856:4639-4665 +
  24. scaffold_1957:13124-13150 +
  25. scaffold_2148:3337-3363 +
  26. scaffold_3783:851-877 +
  27. scaffold_4033:1720-1746 +
  28. scaffold_4341:76-102 +
  29. scaffold_6308:1010133-1010159 +
  30. scaffold_6441:83531-83557 +
  31. scaffold_6473:2603881-2603907 +
  32. scaffold_6496:26558666-26558692 +
  33. scaffold_6498:2753282-2753308 +
  34. scaffold_6500:32244862-32244888 +
  35. scaffold_6541:284383-284409 +
  36. scaffold_6541:2363856-2363882 +
  37. scaffold_6680:24166438-24166464 +
  38. scaffold_0:4322-4348 -
  39. scaffold_2287:918-944 -
  40. scaffold_2670:3210-3236 -
  41. scaffold_3901:478-504 -
  42. scaffold_3966:4480-4506 -
  43. scaffold_4327:2316-2342 -
  44. scaffold_5135:156-182 -
  45. scaffold_6437:76065-76091 -
  46. scaffold_6473:16864423-16864449 -
  47. scaffold_6490:39772-39798 -
  48. scaffold_6496:26694332-26694358 -
  49. scaffold_6496:26749917-26749943 -
  50. scaffold_6496:26760910-26760936 -
  51. scaffold_6498:760510-760536 -
  52. scaffold_6498:2834080-2834106 -
  53. scaffold_6540:622768-622794 -
  54. scaffold_6540:1094565-1094591 -
  55. scaffold_6680:20830705-20830731 -
  56. scaffold_6680:24261961-24261987 -
  57. scaffold_6838:9108-9134 -
  58. scaffold_438:2911-2937 +
  59. scaffold_2555:3996-4022 +
  60. scaffold_3301:715-741 +
  61. scaffold_4711:3460-3486 +
star

Sense Strand Reads

GCGTTTTTAATAATTTGCTTTTTTAATTTGTGAAGCTTTGTGTGCAGTGTTCATTAGTTTCATTATTTGCATTTTTGCTTTAGTGTTTCTATTTGTTGGCGCTCTCCCCAGTTCACTCTTTCTAAGTCTGTGTGAGTGTGTGCATAAGTTGC
***********************************....(((.((((((((((.(((...(((((...(((....)))..)))))...)))..))..)))))).......)).))).*********************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V041
embryo
 V110
male body
........................................................................................................TCCCCAGTTCACTCTTTCTAAGTCT....................... 25 0 1 18.00 18 16 2 0 0
...........................................................................TGCTTTAGTGTTTCTATTTGTTGGCGC.................................................. 27 0 20 17.10 342 325 0 17 0
........................................................................................................TCCCCAGTTCACTCTTTCTAAGTCTG...................... 26 0 1 16.00 16 16 0 0 0
........................................................................................................TCCCCAGTTCACTCTTTCTAAGTCTGTG.................... 28 0 1 7.00 7 7 0 0 0
...........................................................................TGCTTTAGTGTTTCTATTTGTTGGCGCTC................................................ 29 0 20 4.75 95 95 0 0 0
........................................................................................................TCCCCAGTTCACTCTTTCTAAGTCTGT..................... 27 0 1 4.00 4 4 0 0 0
......................................................................................................TCTCCCCAGTTCACTCTTTCTAAGTC........................ 26 0 2 3.50 7 1 6 0 0
................................................................................................................TCACTCTTTCTAAGTCTGTGTGAGT............... 25 0 1 3.00 3 3 0 0 0
......................................................................................................TCTCCCCAGTTCACTCTTTCTAAGTCTG...................... 28 0 1 3.00 3 3 0 0 0
...........................................................................TTCTTTAGTGTTTCTATTTGTTGGCGC.................................................. 27 1 20 2.05 41 0 41 0 0
.......................................................................................................................TTCTAAGTCTGTGTGAGTGT............. 20 0 1 2.00 2 2 0 0 0
.........................................................................................................CCCCAGTTCACTCTTTCTAAGTCTG...................... 25 0 1 2.00 2 2 0 0 0
....................................................................................................................TCTTTCTAAGTCTGTGTGAGTGTGT........... 25 0 1 2.00 2 0 1 1 0
............................................................................GCTTTAGTGTTTCTATTTGTTGG..................................................... 23 0 20 1.45 29 29 0 0 0
......................................................................................TTCTATTTGTTGGCGCTCTCCCCAGT........................................ 26 0 20 1.30 26 26 0 0 0
...........................................................................TGCTTTAGTGTTTCTATTTGTTGGC.................................................... 25 0 20 1.30 26 0 0 26 0
....................................................................................................................TCTTTCTAAGTCTGTGTGAGTGT............. 23 0 1 1.00 1 1 0 0 0
.........................................................................................................CCCCAGTTCACTCTTTCTAAGTCTGT..................... 26 0 1 1.00 1 1 0 0 0
...................................................................................................................CTCTTTCTAAGTCTGTGTGAGTG.............. 23 0 1 1.00 1 1 0 0 0
................................................................................................................TCACTCTTTCTAAGTCTGTGTGAGTT.............. 26 1 1 1.00 1 1 0 0 0
......................................................................................................................TTTCTAAGTCTGTGTGAGTGT............. 21 0 1 1.00 1 1 0 0 0
.......................................................................................................GTCCCCAGTTCACTCTTTCTAAGTCTG...................... 27 1 1 1.00 1 1 0 0 0
.........................................................................................................CCCCAGTTCACTCTTTCTAAGTCT....................... 24 0 1 1.00 1 1 0 0 0
...............................................................................................................TTCACTCTTTCTAAGTCTGTGTGAGT............... 26 0 1 1.00 1 1 0 0 0
............................................................................................................CAGTTCACTCTTTCTAAGTCTGTGT................... 25 0 1 1.00 1 1 0 0 0
...........................................................................................................CCAGTTCACTCTTTCTAAGTCTGT..................... 24 0 1 1.00 1 0 1 0 0
........................................................................................................................TCTAAGTCTGTGTGAGTGTGTG.......... 22 0 1 1.00 1 0 1 0 0
........................................................................................................TCCCCAGTTCACTCTTTCTAAGTC........................ 24 0 2 1.00 2 1 1 0 0
.......................................................................................................................TTCTAAGTCTGTGTGAGTGTGTGC......... 24 0 1 1.00 1 0 0 1 0
............................................................................................................CAGTTCACTCTTTCTAAGTCTGTGTGA................. 27 0 1 1.00 1 1 0 0 0
...............................................................................................................................CTGTGTGAGTGTGTGCATAAGTTGC 25 0 1 1.00 1 1 0 0 0
.............................................................................................................AGTTCACTCTTTCTAAGTCTGTGTGAGT............... 28 0 1 1.00 1 0 1 0 0
........................................................................................................TCCCCAGTTCAATCTTTCTAAGTCT....................... 25 1 1 1.00 1 0 1 0 0
........................................................................................................................TCTAAGTCTGTGTGAGTGTGT........... 21 0 1 1.00 1 1 0 0 0
....................................................................................................................TCTTTCTAAGTCTGTGTGAGTGTGC........... 25 1 1 1.00 1 0 1 0 0
......................................................................................................TCTCCCCAGTTCACTCTTTCTAAGTCT....................... 27 0 1 1.00 1 0 1 0 0
......................................................................................................TCTCCCCAGTTCACTCTTTCTAAGTCTGT..................... 29 0 1 1.00 1 1 0 0 0
....................................................................................................................TCTTTCTAAGTCTGTGTGAGTG.............. 22 0 1 1.00 1 0 1 0 0
......................................................................................................TCTCCCCAGTTCACTCTTTCTAAGCCT....................... 27 1 1 1.00 1 1 0 0 0
...........................................................................................................CCAGTTCACTCTTTCTAAGTCTGTGTGA................. 28 0 1 1.00 1 1 0 0 0
...................................................................................................................CTCTTTCTAAGTCTGTGTGAGTGT............. 24 0 1 1.00 1 1 0 0 0
................................................................................................................TCACTCTTTCTAAGTCTGTGTGAGC............... 25 1 1 1.00 1 0 1 0 0
...................................................................................................................CGCTTTCTAAGTCTGTGTGAGTGT............. 24 1 1 1.00 1 0 1 0 0
.......................................................................................................................TTCTAAGTCTGTGTGAGTGTG............ 21 0 1 1.00 1 1 0 0 0
........................................................................................................TCCCCAGTTCACTCTTTCTAAGTCTGC..................... 27 1 1 1.00 1 0 1 0 0
........................................................................................................TCCCCAGTTCACTCTTTCTAAGTCTGTGT................... 29 0 1 1.00 1 1 0 0 0
.........................................................................................................CCCCAGTTCACTCTTTCTAAGTCTGTG.................... 27 0 1 1.00 1 1 0 0 0
............................................................................GCTTTAGTGTTTCTATTTGTTGGCG................................................... 25 0 20 0.95 19 19 0 0 0
..........................................................................TTGCTTTAGTGTTTCTATTTGTTGGC.................................................... 26 0 20 0.90 18 18 0 0 0
...........................................................................TGCTTTAGTGTTTCTATTTGTTGG..................................................... 24 0 20 0.65 13 0 0 13 0
...........................................................................TGCTTTAGTGTTTCTATTTGTTGGCGCC................................................. 28 1 20 0.60 12 0 12 0 0
........................................................................................................TCCCCAGTTCACTCTTTCTAAGTCC....................... 25 1 2 0.50 1 0 1 0 0
..............................................................................TTTAGTGTTTCTATTTGTTGGCGC.................................................. 24 0 20 0.50 10 10 0 0 0
.....................................................................................................CTCTCCCCAGTTCACTCTTTCTAAGTC........................ 27 0 2 0.50 1 1 0 0 0
............................................................................GCTTTAGTGTTTCTATTTGTTGGCGCT................................................. 27 0 20 0.45 9 9 0 0 0
.............................................................................CTTTAGTGTTTCTATTTGTTGGCGC.................................................. 25 0 20 0.45 9 0 9 0 0
.......................TAATTTGTGAAGCTTTGTGTGCAGT........................................................................................................ 25 0 20 0.45 9 7 2 0 0
...........................................................................TGCTTTAGTGTTTCTATTTGTTGGCG................................................... 26 0 20 0.40 8 0 0 8 0
...........................................................................TGCTTTAGTGTTTCTATTTGTT....................................................... 22 0 20 0.40 8 8 0 0 0
...........................................................................TTCTTTAGTGTTTCTATTTGTTGGCGCT................................................. 28 1 20 0.35 7 0 7 0 0
......................................................................................................................TGTCTAAGTCTGTGTGAGTGT............. 21 1 3 0.33 1 0 1 0 0
......................................................................................TTCTATTTGTTGGCGCTCTCCCCA.......................................... 24 0 20 0.30 6 6 0 0 0
...............................................................................TTAGTGTTTCTATTTGTTGGCGC.................................................. 23 0 20 0.30 6 0 6 0 0
.......................................................................................TCTATTTGTTGGCGCTCTCCCCAGT........................................ 25 0 20 0.25 5 5 0 0 0
..........................................................................TTGCTTTAGTGTTTCTATTTGTTGGCG................................................... 27 0 20 0.25 5 5 0 0 0
............................................................................................TTGTTGGCGCTCTCCCCAGTTCACTCT................................. 27 0 20 0.20 4 4 0 0 0
....................................................................................GTTTCTATTTGTTGGCGC.................................................. 18 0 20 0.20 4 0 4 0 0
....................................................................................GTTTCTATTTGTTGGCGCTC................................................ 20 0 20 0.20 4 0 4 0 0
................................................................................TAGTGTTTCTATTTGTTGGCG................................................... 21 0 20 0.20 4 4 0 0 0
.....................TTTAATTTGTGAAGCTTTGTGTGCA.......................................................................................................... 25 0 20 0.20 4 4 0 0 0
...............................................................................TTAGTGTTTCTATTTGTTGGC.................................................... 21 0 20 0.20 4 4 0 0 0
...........................................................................................TTTGTTGGCGCTCTCCCCAGTTCAC.................................... 25 0 20 0.15 3 3 0 0 0
................................................................................TAGTGTTTCTATTTGTTGGCGC.................................................. 22 0 20 0.15 3 0 3 0 0
...........................................................................TGATTTAGTGTTTCTATTTGTTGG..................................................... 24 1 20 0.15 3 0 2 1 0
...........................................................................TGCTTTAGTGTGTCTATTTGTTGGCGCTC................................................ 29 1 20 0.15 3 3 0 0 0
......................................................TAGTTTCATTATTTGCATTTTTGCTT........................................................................ 26 0 20 0.10 2 2 0 0 0
..............................................................................TGTAGTGTTTCTATTTGTTGGCGC.................................................. 24 1 20 0.10 2 0 2 0 0
..................................................TCATTAGTTTCATTATTTGCATTTT............................................................................. 25 0 20 0.10 2 2 0 0 0
..................................................................................GTGTTTCTATTTGTTGGCGCTCTCC............................................. 25 0 20 0.10 2 1 1 0 0
....................................................................................................................................TGAGTGTGTGCATAAGTTGC 20 0 20 0.10 2 1 1 0 0
..................................................TCATTAGTTTCATTATTTGCATTTTT............................................................................ 26 0 20 0.10 2 2 0 0 0
.............................................................................CTTTAGTGTTTCTATTTGTTGGCGCC................................................. 26 1 20 0.10 2 0 2 0 0
..................................................TCATTAGTTTCATTATTTGCATTT.............................................................................. 24 0 20 0.10 2 1 0 1 0
.....................................................................................TTTCTATTTGTTGGCGCTCTC.............................................. 21 0 20 0.10 2 1 1 0 0
.....................................................................................TTTCTATTTGTTGGCGCTCTCCCC........................................... 24 0 20 0.10 2 1 1 0 0
..................................................................................GTGTTTCTATTTGTTGGCGC.................................................. 20 0 20 0.10 2 0 2 0 0
..............................................................................TTTAGTGTTTCTATTTGTTGGCGA.................................................. 24 1 20 0.10 2 0 0 2 0
..........................................................................ATGCTTTAGTGTTTCTATTTGTTGGC.................................................... 26 1 20 0.10 2 2 0 0 0
......................................................................................TTCTATTTGTTGGCGCTCTCC............................................. 21 0 20 0.10 2 0 2 0 0
......................................................................................TTCTATTTGTTGGCGCTCTCCCCAG......................................... 25 0 20 0.10 2 0 2 0 0
...........................................................................TGCTTTAGTGTTTCTATTTGTTGTCGC.................................................. 27 1 20 0.10 2 0 0 2 0
.......................TAATTTGTGAAGCTTTGTGTGCAG......................................................................................................... 24 0 20 0.10 2 0 1 1 0
........................AATTTGTGAAGCTTTGTGTGCAGTG....................................................................................................... 25 0 20 0.05 1 0 0 0 1
....................................................................................................................................TGAGTGTGTGCATAAGTTG. 19 0 20 0.05 1 1 0 0 0
......................................................................................TTCTATTTGTTGGCGCTCTCCCCAGTTC...................................... 28 0 20 0.05 1 0 1 0 0
...........................................................................TGCTTTAGTGATTCTATTTGTTGGCGC.................................................. 27 1 20 0.05 1 0 1 0 0
..................................................................TTGCATTTTTGCTTTAGTGTTTCTA............................................................. 25 0 20 0.05 1 1 0 0 0
.................................................................................AGTGTTTCTATTTGTTGGCG................................................... 20 0 20 0.05 1 1 0 0 0
............................................................................GCTTTAGTTTTTCTATTTGTTGGC.................................................... 24 1 20 0.05 1 1 0 0 0
...........................................................................TGCTTTAGTGTGTCTTTTTGTTTGC.................................................... 25 3 20 0.05 1 0 0 1 0
...........................................................................TTATTTAGTGTTTCTATTTGTTGGCGCTC................................................ 29 2 20 0.05 1 0 1 0 0
..................TTTTTTAATTTGTGAAGCTTTGTGTG............................................................................................................ 26 0 20 0.05 1 1 0 0 0
.........CTAATTTGCTTTTTTAATTTGTGAAGC.................................................................................................................... 27 1 20 0.05 1 0 0 1 0
.......................................................................TTTTTGCTTTAGTGTTTCT.............................................................. 19 0 20 0.05 1 1 0 0 0
........................................................................................CTATTTGTTGGCGCTCTCCCCAGTTCA..................................... 27 0 20 0.05 1 1 0 0 0
............................................................................GCTTTAGTGTTTCTATTTATTGGC.................................................... 24 1 20 0.05 1 1 0 0 0
...........................................................................TGCTTTAGTGTTTCTATTT.......................................................... 19 0 20 0.05 1 1 0 0 0
......................TTAATTTGTGAAGCTTTGTGTGCA.......................................................................................................... 24 0 20 0.05 1 1 0 0 0
...........................................................................................TTTGTTGGCGCTCTCTCCAGTTCACTC.................................. 27 1 20 0.05 1 0 1 0 0
..............................................................................................GTTGGCGCTCTCCCCAGTTCACTCT................................. 25 0 20 0.05 1 0 1 0 0
...........................................................................TGCTTTAGTGATTCTATTTGTTGGC.................................................... 25 1 20 0.05 1 1 0 0 0
...........................................................................TGCTTTAGTGTTTCTATTTGTTG...................................................... 23 0 20 0.05 1 0 0 1 0
.................................................TTCATTAGTTTCATTATTTGCATTTTTGC.......................................................................... 29 0 20 0.05 1 1 0 0 0
...........................................................................TGCTTTAGTGTTTCTATTTGTTGGCGCG................................................. 28 1 20 0.05 1 1 0 0 0
...................TTTTTAATTTGTGAAGCTTTGTGTG............................................................................................................ 25 0 20 0.05 1 1 0 0 0
...........................................................................TTATTTAGTGTTTCTATTTGTTGGCGC.................................................. 27 2 20 0.05 1 0 1 0 0
...........................................................................TGCCTTAGTGTTTCTATTTGTTGGC.................................................... 25 1 20 0.05 1 1 0 0 0
...........................................................................TGATTTAGTGTTTCTATTTGTTGGCG................................................... 26 1 20 0.05 1 0 1 0 0
.........................................................................TTTGCTTTAGTGTTTCTATTTGTTGGCGC.................................................. 29 0 20 0.05 1 1 0 0 0
..........................................................................TTGCTTTAGTGTTTCTATTTGTT....................................................... 23 0 20 0.05 1 1 0 0 0
.............................................................................................TGTTGGCGCTCTCCCCAGTTCACTC.................................. 25 0 20 0.05 1 0 0 1 0
........................AATTTGTGAAGCTTTGTGTGCAGT........................................................................................................ 24 0 20 0.05 1 1 0 0 0
............................TGTGAAGCTTTGTGTGCAGTG....................................................................................................... 21 0 20 0.05 1 0 1 0 0
........................................................................TTTTGCTTTAGTGTTTCTATTTGTTGG..................................................... 27 0 20 0.05 1 1 0 0 0
...........................................................................TGCTTTAGTTTTTCTATTTGTTGGCGCTC................................................ 29 1 20 0.05 1 0 1 0 0
...........................................................................TTCGTTAGTGTTTCTATTTGTTGGCGC.................................................. 27 2 20 0.05 1 0 1 0 0
....................................................................................GATCCTATTTGTTGGCGC.................................................. 18 2 20 0.05 1 0 1 0 0
.........................................................................TGTGCTTTAGTGTTTCTATTTGTTGG..................................................... 26 1 20 0.05 1 0 1 0 0
...........................................................................................TTTGTTGGCGCTCTCCCCAGT........................................ 21 0 20 0.05 1 0 1 0 0
...............................................................................TTAGTGTTTCTATTTGTTGGCGCTCTCC............................................. 28 0 20 0.05 1 1 0 0 0
................................................................................................................................TGTGTGAGTGTGTGCATAAGTTG. 23 0 20 0.05 1 1 0 0 0
...................................................................................TGTTTCTATTTGTTGGCGCT................................................. 20 0 20 0.05 1 0 1 0 0
...........................................................................TGCTTTAGTGTTTCTATTTGTTTGCGCT................................................. 28 1 20 0.05 1 0 1 0 0
......................TTAATTTGTGAAGCTTTGTGTGCAGT........................................................................................................ 26 0 20 0.05 1 1 0 0 0
.............................................................................CTTTAGTGTTTCTATTTGTTGGCGCTC................................................ 27 0 20 0.05 1 1 0 0 0
...........................................................................................TTTGTTGGCGCTCTCCCCAGTTCACT................................... 26 0 20 0.05 1 1 0 0 0
....................................................ATTAGTTTCATTATTTGCATTTTTGCTT........................................................................ 28 0 20 0.05 1 1 0 0 0
........................................................................................CTATTTGTTGGCGCTCTCCCCAGTTT...................................... 26 1 20 0.05 1 1 0 0 0
......................................................TAGTTTCATTATTTGCATTTTTGC.......................................................................... 24 0 20 0.05 1 1 0 0 0
...........................................................................TGCTTTAGTGTTTCTATTTGTTGGCGTA................................................. 28 2 20 0.05 1 0 1 0 0
...........................................................................TGCTTTAGTGTTTCTATTTG......................................................... 20 0 20 0.05 1 0 0 1 0
...........................................................................TGCTTTAGTGTTTCGATTTGTTGG..................................................... 24 1 20 0.05 1 1 0 0 0
.........................................................................TTTGCTTTAGTGTTTCTATTTGTTGG..................................................... 26 0 20 0.05 1 1 0 0 0
..........................TTTGTGAAGCTTTGTGTGC........................................................................................................... 19 0 20 0.05 1 1 0 0 0
...................................................................................TTTTTCTATTTGTTGGCGCTCTCC............................................. 24 1 20 0.05 1 0 1 0 0
...............................................................................TTAGTGTTTCTATTTGTTGGCGCTCT............................................... 26 0 20 0.05 1 0 0 0 1
..........................................................................................ATTTGTTGGCGCTCTCCCCAGTTCA..................................... 25 0 20 0.05 1 1 0 0 0
.............................................................................................TGTTGGCGCTCTCCCCAGTTCACT................................... 24 0 20 0.05 1 0 1 0 0
...........................................................................TTCTTTAGTGTTTCTATTTTTTGGCGC.................................................. 27 2 20 0.05 1 0 1 0 0
..............................................................................................GTTGGCGCTCTCCCCAGTTCAC.................................... 22 0 20 0.05 1 1 0 0 0
..............TTGCTTTTTTAATTTGTGAAG..................................................................................................................... 21 0 20 0.05 1 0 0 1 0
...................................................................TGCATTTTTGCTTTAGTGTTTCTA............................................................. 24 0 20 0.05 1 1 0 0 0
..............................................................................TCTAGTGTTTCTATTTGTTGGCGC.................................................. 24 1 20 0.05 1 0 1 0 0
..........................................................................................ATTTGTTGGCGCTCTCCCCAGTTCACTC.................................. 28 0 20 0.05 1 1 0 0 0
..............................................................................TGTTGTGTTTCTATTTGTTGGCGCT................................................. 25 2 20 0.05 1 0 1 0 0
..........................................................................TTGTTTTAGTGTTTCTATTTGTT....................................................... 23 1 20 0.05 1 0 1 0 0
............................................................................................TTGTTGGCGCTCTCCCCAGTTCACT................................... 25 0 20 0.05 1 0 1 0 0
.......................TAATTTGTGAAGCTTTGTGTGCAGC........................................................................................................ 25 1 20 0.05 1 0 1 0 0
....................AGTTAATTTGTGAAGCTTTGTGTGCAG......................................................................................................... 27 2 20 0.05 1 1 0 0 0
.............................................................................CTTTAGTTTTTCTATTTGTTGGGGC.................................................. 25 2 20 0.05 1 0 1 0 0
.................................................................................AGTGTTTCTATTTGTTGGC.................................................... 19 0 20 0.05 1 0 1 0 0
...........................................................................TGCCTTAGTGTTTCTATTTGTTGGCGC.................................................. 27 1 20 0.05 1 0 1 0 0
...........................................................................TGCTTTAGTGTTTCTATTTGCTGGC.................................................... 25 1 20 0.05 1 1 0 0 0
..................................................TCATTAGTTTCATTATTTGCATTTTTGC.......................................................................... 28 0 20 0.05 1 1 0 0 0
................................................................................................TGGCGCTCTCCCCAGTTCACT................................... 21 0 20 0.05 1 1 0 0 0
...........................................................................TGATTTAGTGTTTCTATTTGTTGGCGCT................................................. 28 1 20 0.05 1 0 1 0 0
...........................................................................TGCTTTAGTGTTTCTATTTGGTGGGGCC................................................. 28 3 20 0.05 1 0 1 0 0
.....................TTTAATTTGTGAAGCTTTGTGTGCAG......................................................................................................... 26 0 20 0.05 1 0 1 0 0
...........................................................................TGCTTTAGTTTTTCTATTTGTTGGC.................................................... 25 1 20 0.05 1 0 1 0 0
.................................................................................................TGCGCTCTCCCCAGTTCACTCTTTCT............................. 26 1 20 0.05 1 0 1 0 0

Anti-sense strand reads

CGCAAAAATTATTAAACGAAAAAATTAAACACTTCGAAACACACGTCACAAGTAATCAAAGTAATAAACGTAAAAACGAAATCACAAAGATAAACAACCGCGAGAGGGGTCAAGTGAGAAAGATTCAGACACACTCACACACGTATTCAACG
***********************************....(((.((((((((((.(((...(((((...(((....)))..)))))...)))..))..)))))).......)).))).*********************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body
............................................................................................................................TCAGACACACTCACACACGTATTCA... 25 0 1 1.00 1 1 0 0
....................................................................................................................AGAAAGATTCAGACACACTCACACACGT........ 28 0 1 1.00 1 1 0 0
......................................................................................................................AAAGATTCAGACATACTC................ 18 1 1 1.00 1 1 0 0
............................................................................................................................TCAGACACACTCACAAACGTATTCAA.. 26 1 1 1.00 1 0 1 0
....................................................................................................................AGAAAGATTCAGACACACTCACAC............ 24 0 1 1.00 1 1 0 0
.............................................................................................................................CAGACACACTCACACACGTATT..... 22 0 1 1.00 1 0 1 0
............................................................................................................................TCAGACACACTCACACACGTATTCGT.. 26 2 1 1.00 1 0 1 0
..................................................................................................................TGAGAAAGATTCAGACACACTCACACAC.......... 28 0 1 1.00 1 1 0 0
.........................................................................................................GGGGTCAAGTGAGAAAGATTCAGA....................... 24 0 1 1.00 1 0 1 0
.....................................................................................................................AAAAGATTCAGACACACTCACACAC.......... 25 1 1 1.00 1 1 0 0
.........................................................................................................................GATTCAGACACACTCACACAC.......... 21 0 1 1.00 1 1 0 0
...............................................ACAAATAATCAAAGGAATATA.................................................................................... 21 3 20 0.10 2 1 0 1
...............................CCTCGAAACACACGTCACAAGT................................................................................................... 22 1 19 0.05 1 0 1 0
..................................CGAAACACACGTCACAAGTAATCAAA............................................................................................ 26 0 19 0.05 1 1 0 0
......CCTTATTAAACGAAAAAATTAAACACT....................................................................................................................... 27 2 20 0.05 1 1 0 0
........................................................................................................AGGGGTCAAGTGAGAAAGATT........................... 21 0 20 0.05 1 0 1 0
.................................................................................................CCGCGAGAGGGGTCAAGTGAGAA................................ 23 0 20 0.05 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_3682:3829-3980 + dmo_216 GCGTTTTTAATAATTTGCTTT--TTTAATTTGTG------AAGC--TTTGTGTGCAGTG----------------TTCATTAGTTTCATTATTT------GCA---TT--------------------------TTTGCTTTAGTGTTTCTATTTGTTGGCGCTCTCCCCAGTTCACTCTTTCTAAGTCTGTGTGAGTGTGTGCATAAGTTGC
droVir3 scaffold_12958:2856415-2856564 + T---TTAAA--AA---GCTTT--TGTAACTTGTGCAAAG-T-GCTACCTGTGTGCAGCGTTAGTCTTTTAATTATTGCATTTATTAAAAGCGTCAGTTCTGTG---TT--GTTGCTATTGCCTGTTTTGATTCTTTTGCTTTAGTGCTCC-------------CC------------------------TGCGCGTGTGT---------TTGC
dp5 4_group1:1960939-1961021 - T---TTGTATTAATTTATTTTGATTTTATTAATG------AAAC--T-------------------AATAAAAAATTTTTTTATTAAAATATTT------ATA---TTTTCTTAATTTT----------------------------------------------------TTT---------------------------------------
droBia1 scf7180000302402:2118786-2118835 + T---AGCTG--------------------------------------------------------------------------------------------CG---TT--------------------------TTCTTTGTAGCCTTTTTATTTGTTGGCCCGCTGGCCAGCT---------------------------------------
droEug1 scf7180000408642:503-581 + T---TTTTA--TT---ATTTT--TATTATTTTTATTACTTT-----------TATTATT----------------TTTATTATTTTTATTATTT------TTATTATTTTATTATTTTT----------------------------------------------------ATT---------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
GCGTTTTTAATAATTTGCTTT--TTTAATTTGTG------AAGC--TTTGTGTGCAGTG----------------TTCATTAGTTTCATTATTT------GCA---TT--------------------------TTTGCTTTAGTGTTTCTATTTGTTGGCGCTCTCCCCAGTTCACTCTTTCTAAGTCTGTGTGAGTGTGTGCATAAGTTGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.....................................................................................................................................................................TCCCCAGTTCACTCTTTCTAAGTCT.......................25118.00181600020
........................................................................................................................................TGCTTTAGTGTTTCTATTTGTTGGCGC..................................................272017.10342325170000
.....................................................................................................................................................................TCCCCAGTTCACTCTTTCTAAGTCTG......................26116.00161600000
.....................................................................................................................................................................TCCCCAGTTCACTCTTTCTAAGTCTGTG....................2817.007700000
........................................................................................................................................TGCTTTAGTGTTTCTATTTGTTGGCGCTC................................................29204.75959500000
.....................................................................................................................................................................TCCCCAGTTCACTCTTTCTAAGTCTGT.....................2714.004400000
...................................................................................................................................................................TCTCCCCAGTTCACTCTTTCTAAGTC........................2623.507100060
.............................................................................................................................................................................TCACTCTTTCTAAGTCTGTGTGAGT...............2513.003300000
...................................................................................................................................................................TCTCCCCAGTTCACTCTTTCTAAGTCTG......................2813.003300000
....................................................................................................................................................................................TTCTAAGTCTGTGTGAGTGT.............2012.002200000
......................................................................................................................................................................CCCCAGTTCACTCTTTCTAAGTCTG......................2512.002200000
.................................................................................................................................................................................TCTTTCTAAGTCTGTGTGAGTGTGT...........2512.002010010
.........................................................................................................................................GCTTTAGTGTTTCTATTTGTTGG.....................................................23201.45292900000
...................................................................................................................................................TTCTATTTGTTGGCGCTCTCCCCAGT........................................26201.30262600000
........................................................................................................................................TGCTTTAGTGTTTCTATTTGTTGGC....................................................25201.30260260000
.................................................................................................................................................................................TCTTTCTAAGTCTGTGTGAGTGT.............2311.001100000
......................................................................................................................................................................CCCCAGTTCACTCTTTCTAAGTCTGT.....................2611.001100000
................................................................................................................................................................................CTCTTTCTAAGTCTGTGTGAGTG..............2311.001100000
.............................................................................................................................................................................TCACTCTTTCTAAGTCTGTGTGAGTT..............2611.001100000
...................................................................................................................................................................................TTTCTAAGTCTGTGTGAGTGT.............2111.001100000
......................................................................................................................................................................CCCCAGTTCACTCTTTCTAAGTCT.......................2411.001100000
............................................................................................................................................................................TTCACTCTTTCTAAGTCTGTGTGAGT...............2611.001100000
.........................................................................................................................................................................CAGTTCACTCTTTCTAAGTCTGTGT...................2511.001100000
........................................................................................................................................................................CCAGTTCACTCTTTCTAAGTCTGT.....................2411.001000010
.....................................................................................................................................................................................TCTAAGTCTGTGTGAGTGTGTG..........2211.001000010
.....................................................................................................................................................................TCCCCAGTTCACTCTTTCTAAGTC........................2421.002100010
....................................................................................................................................................................................TTCTAAGTCTGTGTGAGTGTGTGC.........2411.001010000
.........................................................................................................................................................................CAGTTCACTCTTTCTAAGTCTGTGTGA.................2711.001100000
............................................................................................................................................................................................CTGTGTGAGTGTGTGCATAAGTTGC2511.001100000
..........................................................................................................................................................................AGTTCACTCTTTCTAAGTCTGTGTGAGT...............2811.001000010
.....................................................................................................................................................................................TCTAAGTCTGTGTGAGTGTGT...........2111.001100000
.................................................................................................................................................................................TCTTTCTAAGTCTGTGTGAGTGTGC...........2511.001000010
...................................................................................................................................................................TCTCCCCAGTTCACTCTTTCTAAGTCT.......................2711.001000010
...................................................................................................................................................................TCTCCCCAGTTCACTCTTTCTAAGTCTGT.....................2911.001100000
.................................................................................................................................................................................TCTTTCTAAGTCTGTGTGAGTG..............2211.001000010
........................................................................................................................................................................CCAGTTCACTCTTTCTAAGTCTGTGTGA.................2811.001100000
................................................................................................................................................................................CTCTTTCTAAGTCTGTGTGAGTGT.............2411.001100000
.............................................................................................................................................................................TCACTCTTTCTAAGTCTGTGTGAGC...............2511.001000010
....................................................................................................................................................................................TTCTAAGTCTGTGTGAGTGTG............2111.001100000
.....................................................................................................................................................................TCCCCAGTTCACTCTTTCTAAGTCTGC.....................2711.001000010
.....................................................................................................................................................................TCCCCAGTTCACTCTTTCTAAGTCTGTGT...................2911.001100000
......................................................................................................................................................................CCCCAGTTCACTCTTTCTAAGTCTGTG....................2711.001100000
.........................................................................................................................................GCTTTAGTGTTTCTATTTGTTGGCG...................................................25200.95191900000
.......................................................................................................................................TTGCTTTAGTGTTTCTATTTGTTGGC....................................................26200.90181800000
........................................................................................................................................TGCTTTAGTGTTTCTATTTGTTGG.....................................................24200.65130130000
........................................................................................................................................TGCTTTAGTGTTTCTATTTGTTGGCGCC.................................................28200.60120000120
.....................................................................................................................................................................TCCCCAGTTCACTCTTTCTAAGTCC.......................2520.501000010
...........................................................................................................................................TTTAGTGTTTCTATTTGTTGGCGC..................................................24200.50101000000
..................................................................................................................................................................CTCTCCCCAGTTCACTCTTTCTAAGTC........................2720.501100000
.........................................................................................................................................GCTTTAGTGTTTCTATTTGTTGGCGCT.................................................27200.459900000
..........................................................................................................................................CTTTAGTGTTTCTATTTGTTGGCGC..................................................25200.459000090
.........................TAATTTGTG------AAGC--TTTGTGTGCAGT...........................................................................................................................................................25200.459700020
........................................................................................................................................TGCTTTAGTGTTTCTATTTGTTGGCG...................................................26200.408080000
........................................................................................................................................TGCTTTAGTGTTTCTATTTGTT.......................................................22200.408800000
...................................................................................................................................................TTCTATTTGTTGGCGCTCTCCCCA..........................................24200.306600000
............................................................................................................................................TTAGTGTTTCTATTTGTTGGCGC..................................................23200.306000060
....................................................................................................................................................TCTATTTGTTGGCGCTCTCCCCAGT........................................25200.255500000
.......................................................................................................................................TTGCTTTAGTGTTTCTATTTGTTGGCG...................................................27200.255500000
.........................................................................................................................................................TTGTTGGCGCTCTCCCCAGTTCACTCT.................................27200.204400000
.................................................................................................................................................GTTTCTATTTGTTGGCGC..................................................18200.204000040
.................................................................................................................................................GTTTCTATTTGTTGGCGCTC................................................20200.204000040
.............................................................................................................................................TAGTGTTTCTATTTGTTGGCG...................................................21200.204400000
.......................TTTAATTTGTG------AAGC--TTTGTGTGCA.............................................................................................................................................................25200.204400000
............................................................................................................................................TTAGTGTTTCTATTTGTTGGC....................................................21200.204400000
........................................................................................................................................................TTTGTTGGCGCTCTCCCCAGTTCAC....................................25200.153300000
.............................................................................................................................................TAGTGTTTCTATTTGTTGGCGC..................................................22200.153000030
................................................................................TAGTTTCATTATTT------GCA---TT--------------------------TTTGCTT........................................................................26200.102200000
............................................................................TCATTAGTTTCATTATTT------GCA---TT--------------------------TT.............................................................................25200.102200000
...............................................................................................................................................GTGTTTCTATTTGTTGGCGCTCTCC.............................................25200.102100010
.................................................................................................................................................................................................TGAGTGTGTGCATAAGTTGC20200.102100010
............................................................................TCATTAGTTTCATTATTT------GCA---TT--------------------------TTT............................................................................26200.102200000
..........................................................................................................................................CTTTAGTGTTTCTATTTGTTGGCGCC.................................................26200.102000020
............................................................................TCATTAGTTTCATTATTT------GCA---TT--------------------------T..............................................................................24200.102110000
..................................................................................................................................................TTTCTATTTGTTGGCGCTCTC..............................................21200.102100010
..................................................................................................................................................TTTCTATTTGTTGGCGCTCTCCCC...........................................24200.102100010
...............................................................................................................................................GTGTTTCTATTTGTTGGCGC..................................................20200.102000020
...........................................................................................................................................TTTAGTGTTTCTATTTGTTGGCGA..................................................24200.102020000
...................................................................................................................................................TTCTATTTGTTGGCGCTCTCC.............................................21200.102000020
...................................................................................................................................................TTCTATTTGTTGGCGCTCTCCCCAG.........................................25200.102000020
.........................TAATTTGTG------AAGC--TTTGTGTGCAG............................................................................................................................................................24200.102010010
..........................AATTTGTG------AAGC--TTTGTGTGCAGTG----------------..........................................................................................................................................25200.051000001
.................................................................................................................................................................................................TGAGTGTGTGCATAAGTTG.19200.051100000
...................................................................................................................................................TTCTATTTGTTGGCGCTCTCCCCAGTTC......................................28200.051000010
............................................................................................TT------GCA---TT--------------------------TTTGCTTTAGTGTTTCTA.............................................................25200.051100000
..............................................................................................................................................AGTGTTTCTATTTGTTGGCG...................................................20200.051100000
..................TTT--TTTAATTTGTG------AAGC--TTTGTGTG...............................................................................................................................................................26200.051100000
..........................................................................................................TT--------------------------TTTGCTTTAGTGTTTCT..............................................................19200.051100000
.....................................................................................................................................................CTATTTGTTGGCGCTCTCCCCAGTTCA.....................................27200.051100000
........................................................................................................................................TGCTTTAGTGTTTCTATTT..........................................................19200.051100000
........................TTAATTTGTG------AAGC--TTTGTGTGCA.............................................................................................................................................................24200.051100000
...........................................................................................................................................................GTTGGCGCTCTCCCCAGTTCACTCT.................................25200.051000010
........................................................................................................................................TGCTTTAGTGTTTCTATTTGTTG......................................................23200.051010000
...........................................................................TTCATTAGTTTCATTATTT------GCA---TT--------------------------TTTGC..........................................................................29200.051100000
........................................................................................................................................TGCTTTAGTGTTTCTATTTGTTGGCGCG.................................................28200.051100000
...................TT--TTTAATTTGTG------AAGC--TTTGTGTG...............................................................................................................................................................25200.051100000
......................................................................................................................................TTTGCTTTAGTGTTTCTATTTGTTGGCGC..................................................29200.051100000
.......................................................................................................................................TTGCTTTAGTGTTTCTATTTGTT.......................................................23200.051100000
..........................................................................................................................................................TGTTGGCGCTCTCCCCAGTTCACTC..................................25200.051010000
..........................AATTTGTG------AAGC--TTTGTGTGCAGT...........................................................................................................................................................24200.051100000
..............................TGTG------AAGC--TTTGTGTGCAGTG----------------..........................................................................................................................................21200.051000010
...........................................................................................................T--------------------------TTTGCTTTAGTGTTTCTATTTGTTGG.....................................................27200.051100000
........................................................................................................................................................TTTGTTGGCGCTCTCCCCAGT........................................21200.051000010
............................................................................................................................................TTAGTGTTTCTATTTGTTGGCGCTCTCC.............................................28200.051100000
.............................................................................................................................................................................................TGTGTGAGTGTGTGCATAAGTTG.23200.051100000
................................................................................................................................................TGTTTCTATTTGTTGGCGCT.................................................20200.051000010
........................TTAATTTGTG------AAGC--TTTGTGTGCAGT...........................................................................................................................................................26200.051100000
..........................................................................................................................................CTTTAGTGTTTCTATTTGTTGGCGCTC................................................27200.051100000
........................................................................................................................................................TTTGTTGGCGCTCTCCCCAGTTCACT...................................26200.051100000
..............................................................................ATTAGTTTCATTATTT------GCA---TT--------------------------TTTGCTT........................................................................28200.051100000
.....................................................................................................................................................CTATTTGTTGGCGCTCTCCCCAGTTT......................................26200.051100000
................................................................................TAGTTTCATTATTT------GCA---TT--------------------------TTTGC..........................................................................24200.051100000
........................................................................................................................................TGCTTTAGTGTTTCTATTTGTTGGCGTA.................................................28200.051000010
........................................................................................................................................TGCTTTAGTGTTTCTATTTG.........................................................20200.051010000
......................................................................................................................................TTTGCTTTAGTGTTTCTATTTGTTGG.....................................................26200.051100000
............................TTTGTG------AAGC--TTTGTGTGC..............................................................................................................................................................19200.051100000
............................................................................................................................................TTAGTGTTTCTATTTGTTGGCGCTCT...............................................26200.051000001
.......................................................................................................................................................ATTTGTTGGCGCTCTCCCCAGTTCA.....................................25200.051100000
..........................................................................................................................................................TGTTGGCGCTCTCCCCAGTTCACT...................................24200.051000010
...........................................................................................................................................................GTTGGCGCTCTCCCCAGTTCAC....................................22200.051100000
..............TTGCTTT--TTTAATTTGTG------AAG..........................................................................................................................................................................21200.051010000
.............................................................................................T------GCA---TT--------------------------TTTGCTTTAGTGTTTCTA.............................................................24200.051100000
.......................................................................................................................................................ATTTGTTGGCGCTCTCCCCAGTTCACTC..................................28200.051100000
.........................................................................................................................................................TTGTTGGCGCTCTCCCCAGTTCACT...................................25200.051000010
.........................TAATTTGTG------AAGC--TTTGTGTGCAGC...........................................................................................................................................................25200.051000010
..............................................................................................................................................AGTGTTTCTATTTGTTGGC....................................................19200.051000010
............................................................................TCATTAGTTTCATTATTT------GCA---TT--------------------------TTTGC..........................................................................28200.051100000
.............................................................................................................................................................TGGCGCTCTCCCCAGTTCACT...................................21200.051100000
.......................TTTAATTTGTG------AAGC--TTTGTGTGCAG............................................................................................................................................................26200.051000010
droVir3
T---TTAAA--AA---GCTTT--TGTAACTTGTGCAAAG-T-GCTACCTGTGTGCAGCGTTAGTCTTTTAATTATTGCATTTATTAAAAGCGTCAGTTCTGTG---TT--GTTGCTATTGCCTGTTTTGATTCTTTTGCTTTAGTGCTCC-------------CC------------------------TGCGCGTGTGT---------TTGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................TGCAAAG-T-GCTACCTGTGTGCAGCG..........................................................................................................................................................2517.007000000000000000000000000024000000000100000000000000000000000000
.................................GCAAAG-T-GCTACCTGTGTGCAGC...........................................................................................................................................................2311.001000000000000000000000000001000000000000000000000000000000000000
................................TGCAAAG-T-GCTACCTGTGTGCAGCGTT........................................................................................................................................................2711.001000000000000000000000000000000001000000000000000000000000000000
................................................................................................................TGCTATTGCCTGTTTTGATTCTTT.............................................................................2421.002000000000000000000000000000100000000100000000000000000000000000
..................................CAAAG-T-GCTACCTGTGTGCAGCGTT........................................................................................................................................................2511.001000000000000000000000000001000000000000000000000000000000000000
............................CTTGTGCAAAG-T-GCTACCTGTGTGC..............................................................................................................................................................2511.001000000000000000000000000000000000000100000000000000000000000000
........................................................................................................................CCTGTTTTGATTCTTTTGCTTTAGT....................................................................2511.001000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................TTTTGCTTTAGTGCTCC-------------CC------------------------TGCGCG..................2511.001000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................TTGCCTGTTTTGATTCTTTTGCTT........................................................................24200.5511000010300000000000000000201000001011000100000000000000000000000
.............................................................................................................................TTTGATTCTTTTGCTTTAGTGCTC................................................................2420.501000000000000000000000000000000000000000100000000000000000000000
.............................................................................................................................TTTGATTCTTTTGCTTTAGTGCTCC-------------A.................................................2620.501000000000000000000000001000000000000000000000000000000000000000
...............................................................................................................................TGATTCTTTTGCTTTAGTGCTCC-------------C.................................................2420.501000000000000000000000000000010000000000000000000000000000000000
.....................................................................................................................TTGCCTGTTTTGATTCTTTTGCTTT.......................................................................25200.204000000000000000000000000001100100000001000000000000000000000000
........................................................................................................................CCTGTTTTGATTCTTTTGCTTT.......................................................................22200.153000000000000000000000002001000000000000000000000000000000000000
...................................................................................................................TATTGCCTGTTTTGATTCTTTTG...........................................................................23200.102000000000000000000000000000200000000000000000000000000000000000
........................................................................................................................CCTGTTTTGATTCTTTTGC..........................................................................19200.102000000000000000000000000200000000000000000000000000000000000000
...................................................................................................................TATTGCCTGTTTTGATTCTTTTGCTT........................................................................26200.102000000000000000000000000100100000000000000000000000000000000000
......................................................................................................................TGCCTGTTTTGATTCTTTTGCTT........................................................................23200.102000000000000000000000000000100001000000000000000000000000000000
...........................................................................................................................GTTTTGATTCTTTTGCTT........................................................................18200.102000010000000000000000000000010000000000000000000000000000000000
...................................................................................................................TATTGCCTGTTTTGATTCTTTTGC..........................................................................24200.102001000000000000000000000001000000000000000000000000000000000000
.....................................................................................................................TTGCCTGTTTTGATTCTTTTGCT.........................................................................23200.051000000000000000000000000000000000001000000000000000000000000000
.....................................................................................................................TTGCCTGTTTTGATTCTTT.............................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................TTGCCTGTTTTGATTCTTTTGC..........................................................................22200.051000010000000000000000000000000000000000000000000000000000000000
....................................................................................................................ATTGCCTGTTTTGATTCTTTTGC..........................................................................23200.051000000000000000000000000000000010000000000000000000000000000000
...................................................................................................................TATTGCCTGTTTTGATTCTTTTGCT.........................................................................25200.051000000000000000000000000000000010000000000000000000000000000000
......................................................................................................................TGCCTGTTTTGATTCTTTTGCTTT.......................................................................24200.051000000000000000000000000000010000000000000000000000000000000000
..........................................................................................................................TGTTTTGATTCTTTTGCTT........................................................................19200.051000000000000000000000000000000000001000000000000000000000000000
........................................................................................................................CCTGTTTTGATTCTTTTGCTT........................................................................21200.051000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................TTGCCTGTTTTGATTCTTTTG...........................................................................21200.051000000000000000000000000000000000010000000000000000000000000000
dp5
T---TTGTATTAATTTATTTTGATTTTATTAATG------AAAC--T-------------------AATAAAAAATTTTTTTATTAAAATATTT------ATA---TTTTCTTAATTTT----------------------------------------------------TTT---------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droBia1
T---AGCTG--------------------------------------------------------------------------------------------CG---TT--------------------------TTCTTTGTAGCCTTTTTATTTGTTGGCCCGCTGGCCAGCT---------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
T---TTTTA--TT---ATTTT--TATTATTTTTATTACTTT-----------TATTATT----------------TTTATTATTTTTATTATTT------TTATTATTTTATTATTTTT----------------------------------------------------ATT---------------------------------------SizeHit CountTotal NormTotal
No Reads

Generated: 05/15/2015 at 02:51 PM