ID:

dmo_2153

 Coordinate:

scaffold_6540:32558055-32558205 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.3 -8.3 -8.3

Flybase annnotation

exon [dmoj_GLEANR_10653:2]; CDS [Dmoj\GI10753-cds]; intron [Dmoj\GI10753-in]

Repeatable elements

NameClassFamilyStrand
(CAAT)nSimple_repeatSimple_repeat+
(CAA)nSimple_repeatSimple_repeat+
mature
  1. scaffold_4074:1667-1686 -
  2. scaffold_6308:2040322-2040341 +
  3. scaffold_6359:2758201-2758220 -
  4. scaffold_6500:13972504-13972523 -
  5. scaffold_6500:16725773-16725792 -
  6. scaffold_6540:21558373-21558392 +
  7. dmo_2153  scaffold_6540:32558154-32558173 +
  8. scaffold_6680:20313910-20313929 +
star

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CATCAATCAGTCAATCAAACTTTAGTGAATTCTATCTAAAGCAAGTTCCTTAATCAATCAATCAATCAATTATTTAATAAACAACTTTATATTCATCTTGCAGTGTAACGAATTTAAAACAACTAAAACAACAAGGAAACAAGCTGCTAGCAGCAACAACTACAACAGCAACAATATCAATTGAACCTTCTACTTGAGCAGGCTTCACGCATATAAATGCCAAGATAAGTCGTTATACTATCAACACCGCC
**************************************************...................................((((.((((...((((...)))).)))).))))..............((((......((((....)))).................((((....))))..))))............************************************************** 		Read size # Mismatch Hit Count Total Norm Total V110
male body		 M060
embryo
 M046
female body
..................................................................................................................................................................................................................ATATAAATGCCAAGATAAGTCGT.................. 23 0 1 2.00 2 2 0 0
..........................................................................................................................................................................................CTTCTACTTGAGCAGGCTT.............................................. 19 0 1 1.00 1 0 0 1
..............................................................................................................................................................................................................ACGCATATAAATGCCAAGATAAGTCGT.................. 27 0 1 1.00 1 1 0 0
...........................AATTCTATCTAAAGCAAGTTCCTTAATC.................................................................................................................................................................................................... 28 0 1 1.00 1 0 1 0
......................................................................................................................................................................................................................AAATGCCAAGATAAGTCGTT................. 20 0 1 1.00 1 1 0 0
................................................................................................ATTAAAGTGTAACGAATTTAAAACAACT............................................................................................................................... 28 3 1 1.00 1 0 1 0
....................................................................................................................................................................................................................ATAAATGCCAAGATAAGTCGT.................. 21 0 1 1.00 1 1 0 0
.................................................................................................................................................................................................................CATATAAATGCCAAGATAAGTCGTT................. 25 0 1 1.00 1 1 0 0
........................GTAAATTCCATCTAAAGC................................................................................................................................................................................................................. 18 2 20 0.15 3 0 1 2
.....................................................................................................................................................GCAGCAACAACTACAACAGC.................................................................................. 20 0 8 0.13 1 0 1 0
.............................................................................................................................................................TACTACAACAGCCACAATAT.......................................................................... 20 2 13 0.08 1 0 0 1

Anti-sense strand reads

GTAGTTAGTCAGTTAGTTTGAAATCACTTAAGATAGATTTCGTTCAAGGAATTAGTTAGTTAGTTAGTTAATAAATTATTTGTTGAAATATAAGTAGAACGTCACATTGCTTAAATTTTGTTGATTTTGTTGTTCCTTTGTTCGACGATCGTCGTTGTTGATGTTGTCGTTGTTATAGTTAACTTGGAAGATGAACTCGTCCGAAGTGCGTATATTTACGGTTCTATTCAGCAATATGATAGTTGTGGCGG
**************************************************...................................((((.((((...((((...)))).)))).))))..............((((......((((....)))).................((((....))))..))))............************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body		 V056
head
............TTAGATTAAAATCACTTAAGA.......................................................................................................................................................................................................................... 21 2 2 0.50 1 1 0 0 0
.....................................................................................................................TTGTTGAGTATGTTGTTCCAT................................................................................................................. 21 3 4 0.25 1 0 1 0 0
.................................................................................................................................TCGTCCCTTAGTTCGACGAT...................................................................................................... 20 3 6 0.17 1 0 0 0 1
...............................................................................................................................................................................TAGTTAACTTGGAAGACAA......................................................... 19 2 6 0.17 1 0 0 1 0
......................................................................................................................................................................................................................................GCAACATTATAGTTCTGGC.. 19 3 11 0.09 1 1 0 0 0
.....................................................................................................................TTGTTGATTTTATAGTTCC................................................................................................................... 19 2 12 0.08 1 0 0 1 0
.......................................................................................................................................................................................................................................CAATATTATAGTTCTGGCT. 19 3 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6540:32558005-32558255 + dmo_2153 CATCAATCAGTCAATCAAACTTT-----------AGTGAA---TTCTAT-CTAA--------AGCAAGTTCCTTAATCAATCAATCAAT-----CAATTA--------TTTAAT---AAA-----------------------------------------CAACT-T----TATATTCATCTTGCAGTGTAACGAATTTAAA------------------ACA---------------------------------ACTAAAA---C---------AACA-----A----------------------------GGAAACAAGCTGCTAGCAGCAA----------------CAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------CTA------------------------------------------CAACAGCAACAATATCA----------------------------------------------------------------------------------------------------------------------A---TTGAACCTTC---------------------------------------------------TACTTGAGC---------------------------AGGCTTCACGCA---------------TA----TAA----ATGCCAAGAT----AAGTCGTTA-------TACTATCAACA---------------------------------------------CCGCC
droVir3 scaffold_12855:2248893-2249144 + CATCACTCGGCCAATGATTC--------------ATATATTTATGAGTATATATATTCGGTCAGTGAGTCAGTCAACCAA--------TCAA-----TAAGTCAACTTTTTAGT---A------------ATGCTGAT----TTT-TCTTTT--------------------------------GCAGTGTAACGAATTTAAA------------------ACA---------------------------------ACAAC-----------------------------------------ACGAAATTAATAGGCAACAAGTTGCAAG-------------------------------C---------------------------------------------------------------------------------------------------------------------------------------------------------AGCAA---CA-------------ACAAGCTTTGGAAAGAAC----------------------------------------------------------------------------------------------------------------------------------------------------------CTT----------------------------------------------------CTCCGTAGCC--------------------------AGGCGTAACGCG---------------TGT---TAG----ATGCCAAGAT----AAGTCGCTA-------TCGTTTCAATA---------------------------------------------CCGCC
droGri2 scaffold_15110:5512442-5512662 + CATCAAATAATACG-------------------------TCTCCAACTGTATTAAATAGTTCAACTAAATAGTT--CTTA--------ACCA-----TATTTCGATTTAAT-GC---A------------ATACAAAT----T--TACTTTAGAGCCCG----------GTGTGTCTC--T-----AT----------------------------TATG-GCCAGGTTAATTGCAACGACAGCTG------------CCAAAA---C---------AACA-----G----------------------------CA--------------------------------------------------AAACCGCGCA-----------------------------AGA----A--CAA-----------------------------------------------------------------------------T-------------------AACAACAA------------------------------------------CAAAGACAACAGCAG------------------CA----------------------------------------------------------------------------------------GCA---------A---GAGC------------------------A----------------------------------------------------------------------------------------------------------------------------------G-------CAACAGCAACA---------------------------------------------ACAGC
droWil2 scf2_1100000004521:6333048-6333298 + AATCAACCAACTAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTAA---AG------------------------CAAAACCAA---C---------AT-------------------------------------------------------------------CAACCAACAA------CA------------------------------------------AC------AACAACTAATATCAAATTAATTAATAAGCGAAAATTAAAAATTTAAATGAAAATGATCTAGTAATTTAAGGATAAAGTACAAA--ACAA--AAAACAAAAACAACAA---------------------------------------------------------CAA------------------CA-------------------------------------------AATAATCAATCATTAAAAATTAAAAAGAAAAATTTATATTAA-------------------------------------------------A---------------------------------T---------GC-------------------------AACAAG-G------------------AGAAAATTTC--ACAAAGAA----AAAAAGTTG-------AAATAACAACA---------------------------------------------ACAAC
dp5 XL_group1e:6344043-6344216 + AATAAAACAAACAA--------------------------------------------------------------------------CCAAAATGTTT------TAT-ATAAATATT------------ATTATCA----------------------------------------------A-------------------CAAAAA-----------------------------------------------------------------------------------------------------------------------------------------TAAAT-AATA------CA------------------------------------------AA------AAA--------------------------------------------------------------------------------------------GTAAAACAACAAAAA--AAAA--AGCAAGAAAAAAATTTAACACAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------ATT----------------------------------------------------CTAC---------ACAACAAAAAA---------------------TCT---------------TAT---TCT----AAAACAAAAA----AATTTGTTCA------ACAATGAAACA---------------------------------------------ACAAC
droPer2 scaffold_77:81323-81484 + AACAGCTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------CATCATCATC-----------------------------------------------------------------ATCAGCAGCAGCAACAGCAGCAGCA-----------------------------------------------------------------------------------------------ACAACGTGTTGCAAGCAG---------TAGCCTGCA---AC------AC---------------------------------------------------------------------------------------------------------CAGCA----------------------------AC--------------A------GCAA------------------CATGATAATGGACCAACGTCCCATCATTTGCATCAATCATC----------------------------------------------------------------------------------------AGCCTCCA------------------------------------------------------------------------------------------------------------A------T----CAGCAGCAG-------CAGCAGCAGCA---------------------------------------------ACAGC
droAna3 scaffold_13340:19296202-19296348 + TGTAACGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAAACAAAAA------------TCCAA---AG------------------------CAGAAGCAA---G---------AA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGCTGCCAGAGCG--AGGTAGCTAGGTAGAGAAGTAAGACGACATTTCACGCCCCACAGCTACCGTAAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAA----ATGCCAAGAT----AAGTCGTTA-------CCGCTTCAACA---------------------------------------------CCGCC
droBip1 scf7180000396730:1869671-1869857 + CAGCTACCTGGCCA-----------------------------------------------------------------------------ACAGCCAT------TAT-ATCCATT---------------------------------------------------------------------------------------------------------GCAGC---AG---------------------------CAACAA---C---------AG----------------------------------------------------------------AATCAGCT-GCAA------CA------------------------------------------GCA----G--CAA---------------------------------------------------------------------------------------------------------CA----------------------------ACGA---AACTTC------------------------------------------------------------------------------------------------------------------------------------------CAGC------------------------AGCAGCAACAGCAACAGAACTCTGGACAATATCAGCCAGATCAGC---------------CGTTCAATCAGT-TGCACG-C------------------CGGACACCTC--TCC-GGGC----AATATGCTG-----------GACAATT---------------------------------------------TGGCC
droKik1 scf7180000302398:559179-559365 - CAAGCTTTT-T---------------------------------------------------------------GATCAAATATCCAAC-----CAATTG------A-TTTGAC---TAATATATACGATATATTCA-------------------------------------------TCAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACATAGCTTGTCGATAACTAATTGATAACCCAAAGATAACAGCAAACATTCCACTTAATCAATACAAAAAAAAA---TGTCAACAAC------------------------AA-------------------------CACCAATACAATACAGGAA--------------------------------------------------------------------------------------------------CATAAAATGCAC--A------------------------------CACGC
droFic1 scf7180000453929:506235-506458 - GTGAGTTTTATTAAGTGGGT---CTTGTACAAACAG----------------------------------------------------TAAA----ATTA--------TTTAAT---A------------ACACCCTC----A--AGTCTTTGC--------------------------------AACATGAGCAAT----------GCAACATTGA--AGC------AG---------------------------CAACAA---C------CGCAT----------------------------------------------------------------TA----------------------AGAAA-------------GTAAATAAAAAACTTGCAATAGCA----A--CCA------------------------------------------------------------------------------AAACAAAATGAAGTAGAGCAGCAACATCA----------------------------------AAGCTGCTTAGGCAACATG------------------------------------------------------------T----------------------------------------------------------------------------------------AGTGTAGT------------------------------------------------------------------------------------------------------------GGCAACAT----GAG-------------CAGTTGCAACA---------------------------------------------CGAGT
droEle1 scf7180000491011:1458066-1458273 + TTTAGTTAA-TAAG---------------------------------------------------------------ACTAGG-----CCAAAACCCTT------TAT-CTCAA---TATCTAATGGTAACTGTTTT-----T--TACTTTTGC---AG----------GCGGACGACCGCCGA-------------------------------------AGAAC---AA------------------------GAACAA-GG---C---------GG--CGACGACGCTCTC--------------------------------------CGCAA----------------CGG---------------------------------------------------C-----------------------------------------------------------------------------------------------------------------------------------------------------------------CATCAAGATCGAGA----------------------------------------------------------------------------------------------------------------------T---CAACGAACCGCTCCACAGCAGTCAGCATATC---------------------------AGCAGCGTGAGTGGC---------------C------------------------------------------------------------------TGTCC-------ATCCAGCAGCA---------------------------------------------GATCA
droRho1 scf7180000780224:32194-32404 - AAGTTTTTT-----------------------------------------------------------------AATCAAGCCTCCTGT-----CAAGTG--------TTTG-----------------------------------------C---AAAACAAATATCGCGCTTATCCATCAA-------------------TCAAAACACGCAATA-------------------------------------------------T---------GG--CAGCGTGACTTTCCACAACTAAG------------------------------CAA----------------CATCCACGGCGGCAACTCCGGGCAGAAGGCAAGTGGTTCTGGCACTTGCCCTCCCCCGAGT--GCT------------------------------------------------------------------------------AAACCAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAACAGAGCGGAAC----A------ATAAAGCGACA---------------------------------------------CTGTC
droBia1 scf7180000299151:402517-402673 - TTTGGTAAC--------------------------------------------------------------------CAA--------CCTC-----AAAGTCCTCCTACTAAT---T------------CTCCTCAGCAAAATC-CTACTG--------------------------------GTA-TAA--------------------------------------------GCTACTCTCAG-------------------------------------------------------------------------------------------------------CC-ACAA------CA------------------------------------------GC------------------------------------------------------------------------------------------------------------AACAACAG--CCAC--AGCAACAACC------------GCA------------------------------------------------------------------------------------------------------------------------------------ATACATGCAAAATTTCCAAC------------------------AAC------------------------------------AGCAACCT----------------------------------------------------------------------------------CAA-------TACGCCCAAAA---------------------------------------------CTTCC
droTak1 scf7180000415785:77059-77227 + ATAAACAATATTTAA-------------AATAACAA--------------------TACATT------------TAAATAAAATCAACC--------------------------------------------------------CACTTT------------------------GGACGTCGG-------------------------------------ACAAA---TGCTGCAATATCAGCAA-------------------------------------------------------------------------------------------------------CC-GCAA------CA------------------------------------------GC------AACAA---------------------------------------------------------------------------------------------------------CA----------------------------GCAA--CAGCAGCAACTGCAACAGGAGCAACACCAGCAACTGCAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------------------------------------------------------------------------------G----CAGCAGCAG-------CAACATCAGCA---------------------------------------------ACTTT
droEug1 scf7180000409490:1089925-1090197 + TCTCATTTAGTCAGTCAAAC--------------AGTCAG---TCAGTG-AGACAGTTCGTCA--------TTGAGTCACTCAGTCATT-----CCGTCA--------GTTAGC---CAG-----------------------------------------CG---------------------------CCCTCAAT----------GCACGCTTTA--TGC------AG------------------------CAGCAGCAG---C---------GA----------------------------------------------------------------TGACAACA-ACGT------CA------------------------------------------AAA----G--CAA-----------------------------------------------------------------------------C-------------------AGCGACAA------------------------------------------CAACA------GCAA------------------CAA-------------------------------------CA---GAA------------------------------------------GCG---------G---AGAC------------------------ATC------------------------------------AGCAAACTCAGTCAAAAAGTTCATTGAACCTGGCCCAGTGCGAATTCGGTTGTCGTAGG----TTA--------GGGACAGTGCGGAAC----GGTATGGTATAACCGACA---------------------------------------------CCGAC
dm3 chr2R:13261571-13261705 + AGCAACTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------GATAATCATCGA-------------------------------------GCCGC---AG------------------------CAGCAACAG---C---------AA-------------------------------------------------------------------CAGCC-GCCG------CA------------------------------------------GC------AGCAG---------------------------------------------------------------------------------------------------------CA----------------------------ACAGTTCAGCTATCACAGCAACAGCAGCA----------------------------------------------------------------------------------------------------------------------A---TAACAACTAC---------------------------------------------------TACCACAGCAATGCCAGCA--------------------------------------------------------------------------------------------------AGCAGGCAGCAC---------------------------------ACGCC
droSim2 3l:6619192-6619390 - AATTAAATTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACAGC-----------------------------------------------------------------ATCAGGTGCAGCAAGTGCAGCAGGT-------------------------------------------------TCACTATCAGCAGCAGCAACAGGAGCCCCA-GCAG------CA------------------------------------------GC---------AG---------------------------------------------------------------------------------------------------------CA-------------ACA------------ACTG--------------CACATGGAG-------------------------------------------------------------------------------------------------------------------------------C------------------------AACAGCAGCAGCAGCAGCAATATGTGCAGCATCAGCCGCAGCAAC---------------CCGC----------------------------------------------------------------------------------------CATCCAGCATACGCAGCAGATTTACTACACTTCCGAGCAAGTCCTGCA
droSec2 scaffold_1:10762582-10762716 + AGCAACTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------GATAATCATCGA-------------------------------------GCCGC---AG------------------------CAGCAACAG---C---------AA-------------------------------------------------------------------CAGCC-GCAG------CA------------------------------------------GC------AGCAG---------------------------------------------------------------------------------------------------------CA----------------------------ACAGTTCAGCTACCACAGCAACAGCAGCA----------------------------------------------------------------------------------------------------------------------A---TAACAACTAC---------------------------------------------------TACCACAGCAATGGCAGCA--------------------------------------------------------------------------------------------------AGCAGGCAGCAC---------------------------------ACGCC
droYak3 X:12404625-12404806 - AATAAGTCA-----------------------------------------------------------------------------------------------TTGTATAAAC---C------------ATGTTCAT----ATC-TTATTT--------------------------------GAACTGT--------------------------------------------GACGCCAGCAGCCACAGCAACAGCAACAGCAGCAGCAACC----------------------------------------------ACACTGATACCTGCAACAACTTGAGCTGCA-GCAG------C---------------------------------------------------------------------------------------------------------------------------------------------------------AGCAA---CA-------------ACA------------CTGA--------------TACCTGCAA------------------CA----------------------------------------------------------------------------------------ACT---------T---GAGC------------------------T---------------------------------------GC--------------------------------------------------------------------------------------------------AGCAGCAGCAACAACACTGATA---------------------------------CCTGC
droEre2 scaffold_4845:12591713-12591859 - AGCAACTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------GATAATCATCGA-------------------------------------GCCGC---AG------------------------CAGCAACAG---C---------AA--CAGCAGCACCAGC-------------------------------C----------------------GCC-GCAG------CA------------------------------------------GC------AGCAG---------------------------------------------------------------------------------------------------------CA----------------------------ACAGTTCAGCTACCACAGCAACAGCAGCA----------------------------------------------------------------------------------------------------------------------A---TAACAACTAC---------------------------------------------------TACCACAGCAATGCCAGCA--------------------------------------------------------------------------------------------------AGCAGGCAGCAC---------------------------------ACGCC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
CATCAATCAGTCAATCAAACTTT-----------AGTGAA---TTCTAT-CTAA--------AGCAAGTTCCTTAATCAATCAATCAAT-----CAATTA--------TTTAAT---AAA-----------------------------------------CAACT-T----TATATTCATCTTGCAGTGTAACGAATTTAAA------------------ACA---------------------------------ACTAAAA---C---------AACA-----A----------------------------GGAAACAAGCTGCTAGCAGCAA----------------CAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------CTA------------------------------------------CAACAGCAACAATATCA----------------------------------------------------------------------------------------------------------------------A---TTGAACCTTC---------------------------------------------------TACTTGAGC---------------------------AGGCTTCACGCA---------------TA----TAA----ATGCCAAGAT----AAGTCGTTA-------TACTATCAACA---------------------------------------------CCGCCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------TA----TAA----ATGCCAAGAT----AAGTCGT......................................................................2312.002000002
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTC---------------------------------------------------TACTTGAGC---------------------------AGGCTT.............................................................................................................................1911.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCA---------------TA----TAA----ATGCCAAGAT----AAGTCGT......................................................................2711.001000001
......................................AA---TTCTAT-CTAA--------AGCAAGTTCCTTAATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA----ATGCCAAGAT----AAGTCGTT.....................................................................2011.001000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----TAA----ATGCCAAGAT----AAGTCGT......................................................................2111.001000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---------------TA----TAA----ATGCCAAGAT----AAGTCGTT.....................................................................2511.001000001
..........................................................................................................................................................................................................................................................................................................................................GCAGCAA----------------CAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------CTA------------------------------------------CAACAGC........................................................................................................................................................................................................................................................................................................................................................................2080.131000010
droVir3
CATCACTCGGCCAATGATTC--------------ATATATTTATGAGTATATATATTCGGTCAGTGAGTCAGTCAACCAA--------TCAA-----TAAGTCAACTTTTTAGT---A------------ATGCTGAT----TTT-TCTTTT--------------------------------GCAGTGTAACGAATTTAAA------------------ACA---------------------------------ACAAC-----------------------------------------ACGAAATTAATAGGCAACAAGTTGCAAG-------------------------------C---------------------------------------------------------------------------------------------------------------------------------------------------------AGCAA---CA-------------ACAAGCTTTGGAAAGAAC----------------------------------------------------------------------------------------------------------------------------------------------------------CTT----------------------------------------------------CTCCGTAGCC--------------------------AGGCGTAACGCG---------------TGT---TAG----ATGCCAAGAT----AAGTCGCTA-------TCGTTTCAATA---------------------------------------------CCGCCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCGTAGCC--------------------------AGGCGTAACGCG---------------T.......................................................................................................2312.002001000000000000000000000000000001000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCC--------------------------AGGCGTAACGCG---------------TGT---T.................................................................................................1912.002001000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................G-------------------------------C---------------------------------------------------------------------------------------------------------------------------------------------------------AGCAA---CA-------------ACAAGCTTTGGAA.............................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
.........................................................................................................................................................................................CAGTGTAACGAATTTAAA------------------ACA---------------------------------ACAAC-----------------------------------------AC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000000000000000000010000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---CA-------------ACAAGCTTTGGAAAGAAC----------------------------------------------------------------------------------------------------------------------------------------------------------..............................................................................................................................................................................................................................2211.001000000000000001000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAACGCG---------------TGT---TAG----ATGC.......................................................................................1811.001000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCAAGAT----AAGTCGCTA-------TC...........................................................2011.001000000000000001000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................AAC-----------------------------------------ACGAAATTAATAGGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAAC----------------------------------------------------------------------------------------------------------------------------------------------------------CTT----------------------------------------------------CTCCGTAGCC--------------------------AGGC...............................................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCC--------------------------AGGCGTAACGCG---------------TGT---TAG----ATGC.......................................................................................2611.001000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--------------------------AGGCGTAACGCG---------------TGT---TAG----ATGCCAAG...................................................................................2711.001000000000000000000000000010000000000000000000000000000000000000
...........................................................................................................................................................................................GTGTAACGAATTTAAA------------------ACA---------------------------------A...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................CAAG-------------------------------C---------------------------------------------------------------------------------------------------------------------------------------------------------AGCAA---CA-------------ACAAGCTTTGGAA.............................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000001000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAGAT----AAGTCGCTA-------TCGT.........................................................2111.001000000000000010000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC----------------------------------------------------------------------------------------------------------------------------------------------------------CTT----------------------------------------------------CTCCGTAGCC--------------------------AGGC...............................................................................................................................2011.001000000000000000000100000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................TGCAAG-------------------------------C---------------------------------------------------------------------------------------------------------------------------------------------------------AGCAA---CA-------------ACAAGCTTTG................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT---TAG----ATGCCAAGAT----AAGTC........................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GT---TAG----ATGCCAAGAT----AAGTCGCT.....................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAACGCG---------------TGT---TAG----ATGCCC.....................................................................................2011.001000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................CGAATTTAAA------------------ACA---------------------------------ACAAC-----------------------------------------A.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000100000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................TAATAGGCAACAAGTTGCAAG-------------------------------C---------------------------------------------------------------------------------------------------------------------------------------------------------AGC..............................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000010000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................TTGCAAG-------------------------------C---------------------------------------------------------------------------------------------------------------------------------------------------------AGCAA---CA-------------ACAAGCTTTG................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................CGAATTTAAA------------------ACA---------------------------------ACAAC-----------------------------------------AC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000001000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA---CA-------------ACAAGCTTTGGAAAGAAC----------------------------------------------------------------------------------------------------------------------------------------------------------C.............................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAGAT----AAGTCGCTA-------T............................................................1811.001000000000000010000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------------ACAAGCTTTGGAAAGAAC----------------------------------------------------------------------------------------------------------------------------------------------------------CT............................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................GTAACGAATTTAAA------------------ACA---------------------------------ACAAC-----------------------------------------A.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCG---------------TGT---TAG----ATGCCAAGAT----AAGTCGCT.....................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGGAAAGAAC----------------------------------------------------------------------------------------------------------------------------------------------------------CTT----------------------------------------------------CTCCGTAGCC--------------------------...................................................................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
droGri2
CATCAAATAATACG-------------------------TCTCCAACTGTATTAAATAGTTCAACTAAATAGTT--CTTA--------ACCA-----TATTTCGATTTAAT-GC---A------------ATACAAAT----T--TACTTTAGAGCCCG----------GTGTGTCTC--T-----AT----------------------------TATG-GCCAGGTTAATTGCAACGACAGCTG------------CCAAAA---C---------AACA-----G----------------------------CA--------------------------------------------------AAACCGCGCA-----------------------------AGA----A--CAA-----------------------------------------------------------------------------T-------------------AACAACAA------------------------------------------CAAAGACAACAGCAG------------------CA----------------------------------------------------------------------------------------GCA---------A---GAGC------------------------A----------------------------------------------------------------------------------------------------------------------------------G-------CAACAGCAACA---------------------------------------------ACAGCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAGCAG------------------CA----------------------------------------------------------------------------------------GCA---------A---GAGC------------------------........................................................................................................................................................................................................2060.17101
droWil2
AATCAACCAACTAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTAA---AG------------------------CAAAACCAA---C---------AT-------------------------------------------------------------------CAACCAACAA------CA------------------------------------------AC------AACAACTAATATCAAATTAATTAATAAGCGAAAATTAAAAATTTAAATGAAAATGATCTAGTAATTTAAGGATAAAGTACAAA--ACAA--AAAACAAAAACAACAA---------------------------------------------------------CAA------------------CA-------------------------------------------AATAATCAATCATTAAAAATTAAAAAGAAAAATTTATATTAA-------------------------------------------------A---------------------------------T---------GC-------------------------AACAAG-G------------------AGAAAATTTC--ACAAAGAA----AAAAAGTTG-------AAATAACAACA---------------------------------------------ACAACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGATCTAGTAATTTAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00200020
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------------------T---------GC-------------------------AACAAG-G------------------AGAAAATTT............................................................................................2012.00200110
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAA-------------------------------------------------A---------------------------------T---------GC-------------------------AACAAG-G------------------AGAAAATTT............................................................................................2312.00200020
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAATTTAAATGAAAATGATCTAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00200110
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTAAGGATAAAGTACAAA--ACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
....AACCAACTAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTAA---AG------------------------CAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGAAAATTAAAAATTTAAAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------------------T---------GC-------------------------AACAAG-G------------------AGAAAATTTC--A........................................................................................2211.00100100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAATGATCTAGTAATTTAAGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATAAAGTACAAA--ACAA--A...........................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAGGATAAAGTACAAA--ACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC-------------------------AACAAG-G------------------AGAAAATTTC--ACAAA....................................................................................2411.00100010
......................................................................................................................................................................................................................................G------------------------CAAAACCAA---C---------AT-------------------------------------------------------------------CAACCAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGTAATTTAAGGATAAAGTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAACAACAA---------------------------------------------------------CAA------------------CA-------------------------------------------AATAATCA.........................................................................................................................................................................................................................................................................................2411.00101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGTAATTTAAGGATAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTAAGGATAAAGTACAAA--AC................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------------------------------------------------A---------------------------------T---------GC-------------------------AACAAG-G------------------AGAAAATTTC--ACG......................................................................................2511.00100001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTAAATGAAAATGATCTAGTAAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
...CAACCAACTAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTAA---AG------------------------C.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
...........................................................................................................................................................................................................................................................................................................................................................AACCAACAA------CA------------------------------------------AC------AACAACTAAT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAAGCGAAAATTAAAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTTC--ACAAAGAA----AAAAAGTTG-------AA...........................................................2611.00100010
..........CTAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTAA---AG------------------------CAAAACCAA---C---------AT-------------------------------------------------------------------CAACC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAA---------------------------------------------------------CAA------------------CA-------------------------------------------AATAATCAATC......................................................................................................................................................................................................................................................................................2311.00101000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAATCAATCATTAAAAAT.............................................................................................................................................................................................................................................................................1911.00101000
.....................................................................................................................................................................................................................................AG------------------------CAAAACCAA---C---------AT-------------------------------------------------------------------CAACCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAATGAAAATGATCTAGTAATTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGTAATTTAAGGATAAAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
....AACCAACTAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTAA---AG------------------------CA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAATGATCTAGTAATTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAA-------------------------------------------------A---------------------------------T---------GC-------------------------AACAAG-G------------------AGAAAATTT............................................................................................2511.00100010
..TCAACCAACTAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTAA---AG------------------------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
............AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTAA---AG------------------------CAAAACCAA---C---------AT-------------------------------------------------------------------CAACCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTAA-------------------------------------------------A---------------------------------T---------GC-------------------------AACAAG-G------------------AGAAAATTTC--.........................................................................................2811.00101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTAATAAGCGAAAATTA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000
.......................................................................................................................................................................................................................................................................A---C---------AT-------------------------------------------------------------------CAACCAACAA------CA------------------------------------------AC------AACAACTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAA-------------------------------------------------A---------------------------------T---------GC-------------------------AACAAG-G------------------AGAAAAT..............................................................................................2111.00100100
............................................................................................................................................................................................................................................................................................................................................................ACCAACAA------CA------------------------------------------AC------AACAACT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--AAAACAAAAACAACAA---------------------------------------------------------CAA------------------C.............................................................................................................................................................................................................................................................................................................................................21200.05101000
dp5
AATAAAACAAACAA--------------------------------------------------------------------------CCAAAATGTTT------TAT-ATAAATATT------------ATTATCA----------------------------------------------A-------------------CAAAAA-----------------------------------------------------------------------------------------------------------------------------------------TAAAT-AATA------CA------------------------------------------AA------AAA--------------------------------------------------------------------------------------------GTAAAACAACAAAAA--AAAA--AGCAAGAAAAAAATTTAACACAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------ATT----------------------------------------------------CTAC---------ACAACAAAAAA---------------------TCT---------------TAT---TCT----AAAACAAAAA----AATTTGTTCA------ACAATGAAACA---------------------------------------------ACAACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
No Reads
droPer2
AACAGCTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------CATCATCATC-----------------------------------------------------------------ATCAGCAGCAGCAACAGCAGCAGCA-----------------------------------------------------------------------------------------------ACAACGTGTTGCAAGCAG---------TAGCCTGCA---AC------AC---------------------------------------------------------------------------------------------------------CAGCA----------------------------AC--------------A------GCAA------------------CATGATAATGGACCAACGTCCCATCATTTGCATCAATCATC----------------------------------------------------------------------------------------AGCCTCCA------------------------------------------------------------------------------------------------------------A------T----CAGCAGCAG-------CAGCAGCAGCA---------------------------------------------ACAGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATC----------------------------------------------------------------------------------------AGCCTCCA------------------------------------------------------------------------------------------------------------A------T----CAGCAG.......................................................................1911.001000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCTCCA------------------------------------------------------------------------------------------------------------A------T----CAGCAGCAG-------C............................................................2011.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTCCA------------------------------------------------------------------------------------------------------------A------T----CAGCAGCAG-------CA...........................................................2020.501000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAG-------CAGCAGCAGCA---------------------------------------------ACAGC22200.051100000
droAna3
TGTAACGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAAACAAAAA------------TCCAA---AG------------------------CAGAAGCAA---G---------AA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGCTGCCAGAGCG--AGGTAGCTAGGTAGAGAAGTAAGACGACATTTCACGCCCCACAGCTACCGTAAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAA----ATGCCAAGAT----AAGTCGTTA-------CCGCTTCAACA---------------------------------------------CCGCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................................................................................................................................................................................................................................................................A---G---------AA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGCTGCCAGAGCG--AGGTAGC..............................................................................................................................................................................................................................................................................................................................................................................................................2512.002000002
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAT----AAGTCGTTA-------CCGCTTCA.....................................................2011.001100000
.....................................................................................................................................................................................................TTTAAACAAAAA------------TCCAA---AG------------------------CAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTAGCTAGGTAGAGAAGTAAGA.............................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCG--AGGTAGCTAGGTAGAGAA...................................................................................................................................................................................................................................................................................................................................................................................................2111.001000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATTTCACGCCCCACAGCTACCGTAAG...............................................................................................................................................................................................................................................................................................................................................................2811.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAT----AAGTCGTTA-------CCGCTT.......................................................1811.001010000
.............................................................................................................................................................................................................AAAA------------TCCAA---AG------------------------CAGAAGCAA---G---------A...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCACGCCCCACAGCTACCGTAAGA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------..................................................................................................2511.001010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCAGAGCG--AGGTAGCTAG...........................................................................................................................................................................................................................................................................................................................................................................................................2011.001000010
.....................................................................................................................................................................................................................................AG------------------------CAGAAGCAA---G---------AA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGCT................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
...............................................................................................................................................................................................................AA------------TCCAA---AG------------------------CAGAAGCAA---G---------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAA----ATGCCAAGAT----AAGTCGT......................................................................2111.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAA----ATGCCAAGAT----AAGTCGTT.....................................................................2111.001000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAA----ATGCCAAGAT----AAGTCGTTA-------CCGCTTC......................................................2911.001000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAAGAT----AAGTCGTTA-------CCGC.........................................................2111.001000010
....................................................................................................................................................................................................................................................................GCAA---G---------AA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGCTGCCAGAGC........................................................................................................................................................................................................................................................................................................................................................................................................................2011.001010000
droBip1
CAGCTACCTGGCCA-----------------------------------------------------------------------------ACAGCCAT------TAT-ATCCATT---------------------------------------------------------------------------------------------------------GCAGC---AG---------------------------CAACAA---C---------AG----------------------------------------------------------------AATCAGCT-GCAA------CA------------------------------------------GCA----G--CAA---------------------------------------------------------------------------------------------------------CA----------------------------ACGA---AACTTC------------------------------------------------------------------------------------------------------------------------------------------CAGC------------------------AGCAGCAACAGCAACAGAACTCTGGACAATATCAGCCAGATCAGC---------------CGTTCAATCAGT-TGCACG-C------------------CGGACACCTC--TCC-GGGC----AATATGCTG-----------GACAATT---------------------------------------------TGGCCSizeHit CountTotal NormTotal
No Reads
droKik1
CAAGCTTTT-T---------------------------------------------------------------GATCAAATATCCAAC-----CAATTG------A-TTTGAC---TAATATATACGATATATTCA-------------------------------------------TCAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACATAGCTTGTCGATAACTAATTGATAACCCAAAGATAACAGCAAACATTCCACTTAATCAATACAAAAAAAAA---TGTCAACAAC------------------------AA-------------------------CACCAATACAATACAGGAA--------------------------------------------------------------------------------------------------CATAAAATGCAC--A------------------------------CACGCSizeHit CountTotal NormTotal
No Reads
droFic1
GTGAGTTTTATTAAGTGGGT---CTTGTACAAACAG----------------------------------------------------TAAA----ATTA--------TTTAAT---A------------ACACCCTC----A--AGTCTTTGC--------------------------------AACATGAGCAAT----------GCAACATTGA--AGC------AG---------------------------CAACAA---C------CGCAT----------------------------------------------------------------TA----------------------AGAAA-------------GTAAATAAAAAACTTGCAATAGCA----A--CCA------------------------------------------------------------------------------AAACAAAATGAAGTAGAGCAGCAACATCA----------------------------------AAGCTGCTTAGGCAACATG------------------------------------------------------------T----------------------------------------------------------------------------------------AGTGTAGT------------------------------------------------------------------------------------------------------------GGCAACAT----GAG-------------CAGTTGCAACA---------------------------------------------CGAGTSizeHit CountTotal NormTotal
No Reads
droEle1
TTTAGTTAA-TAAG---------------------------------------------------------------ACTAGG-----CCAAAACCCTT------TAT-CTCAA---TATCTAATGGTAACTGTTTT-----T--TACTTTTGC---AG----------GCGGACGACCGCCGA-------------------------------------AGAAC---AA------------------------GAACAA-GG---C---------GG--CGACGACGCTCTC--------------------------------------CGCAA----------------CGG---------------------------------------------------C-----------------------------------------------------------------------------------------------------------------------------------------------------------------CATCAAGATCGAGA----------------------------------------------------------------------------------------------------------------------T---CAACGAACCGCTCCACAGCAGTCAGCATATC---------------------------AGCAGCGTGAGTGGC---------------C------------------------------------------------------------------TGTCC-------ATCCAGCAGCA---------------------------------------------GATCASizeHit CountTotal NormTotal
No Reads
droRho1
AAGTTTTTT-----------------------------------------------------------------AATCAAGCCTCCTGT-----CAAGTG--------TTTG-----------------------------------------C---AAAACAAATATCGCGCTTATCCATCAA-------------------TCAAAACACGCAATA-------------------------------------------------T---------GG--CAGCGTGACTTTCCACAACTAAG------------------------------CAA----------------CATCCACGGCGGCAACTCCGGGCAGAAGGCAAGTGGTTCTGGCACTTGCCCTCCCCCGAGT--GCT------------------------------------------------------------------------------AAACCAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAACAGAGCGGAAC----A------ATAAAGCGACA---------------------------------------------CTGTCSizeHit CountTotal NormTotal
No Reads
droBia1
TTTGGTAAC--------------------------------------------------------------------CAA--------CCTC-----AAAGTCCTCCTACTAAT---T------------CTCCTCAGCAAAATC-CTACTG--------------------------------GTA-TAA--------------------------------------------GCTACTCTCAG-------------------------------------------------------------------------------------------------------CC-ACAA------CA------------------------------------------GC------------------------------------------------------------------------------------------------------------AACAACAG--CCAC--AGCAACAACC------------GCA------------------------------------------------------------------------------------------------------------------------------------ATACATGCAAAATTTCCAAC------------------------AAC------------------------------------AGCAACCT----------------------------------------------------------------------------------CAA-------TACGCCCAAAA---------------------------------------------CTTCCSizeHit CountTotal NormTotal
No Reads
droTak1
ATAAACAATATTTAA-------------AATAACAA--------------------TACATT------------TAAATAAAATCAACC--------------------------------------------------------CACTTT------------------------GGACGTCGG-------------------------------------ACAAA---TGCTGCAATATCAGCAA-------------------------------------------------------------------------------------------------------CC-GCAA------CA------------------------------------------GC------AACAA---------------------------------------------------------------------------------------------------------CA----------------------------GCAA--CAGCAGCAACTGCAACAGGAGCAACACCAGCAACTGCAAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------------------------------------------------------------------------------G----CAGCAGCAG-------CAACATCAGCA---------------------------------------------ACTTTSizeHit CountTotal NormTotal
No Reads
droEug1
TCTCATTTAGTCAGTCAAAC--------------AGTCAG---TCAGTG-AGACAGTTCGTCA--------TTGAGTCACTCAGTCATT-----CCGTCA--------GTTAGC---CAG-----------------------------------------CG---------------------------CCCTCAAT----------GCACGCTTTA--TGC------AG------------------------CAGCAGCAG---C---------GA----------------------------------------------------------------TGACAACA-ACGT------CA------------------------------------------AAA----G--CAA-----------------------------------------------------------------------------C-------------------AGCGACAA------------------------------------------CAACA------GCAA------------------CAA-------------------------------------CA---GAA------------------------------------------GCG---------G---AGAC------------------------ATC------------------------------------AGCAAACTCAGTCAAAAAGTTCATTGAACCTGGCCCAGTGCGAATTCGGTTGTCGTAGG----TTA--------GGGACAGTGCGGAAC----GGTATGGTATAACCGACA---------------------------------------------CCGACSizeHit CountTotal NormTotal
No Reads
dm3
AGCAACTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------GATAATCATCGA-------------------------------------GCCGC---AG------------------------CAGCAACAG---C---------AA-------------------------------------------------------------------CAGCC-GCCG------CA------------------------------------------GC------AGCAG---------------------------------------------------------------------------------------------------------CA----------------------------ACAGTTCAGCTATCACAGCAACAGCAGCA----------------------------------------------------------------------------------------------------------------------A---TAACAACTAC---------------------------------------------------TACCACAGCAATGCCAGCA--------------------------------------------------------------------------------------------------AGCAGGCAGCAC---------------------------------ACGCCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCACAGCAACAGCAGCA----------------------------------------------------------------------------------------------------------------------A---TAACAAC.............................................................................................................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCTATCACAGCAACAGCAGCA----------------------------------------------------------------------------------------------------------------------A---T...................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCACAGCAATGCCAGCA--------------------------------------------------------------------------------------------------AGCAGG............................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................TCATCGA-------------------------------------GCCGC---AG------------------------CAGCAACAG---C---------AA-------------------------------------------------------------------CA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
AGCAACTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------GATAATCATCGA-------------------------------------GCCGC---A...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCA----------------------------------------------------------------------------------------------------------------------A---TAACAACT............................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................AG------------------------CAGCAACAG---C---------AA-------------------------------------------------------------------CAGCC-G....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2021.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
...................................................................................................................................................................................ATCGA-------------------------------------GCCGC---AG------------------------CAGCAACAG---C---------AA-------------------------------------------------------------------CAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGCAACAGCAGCA----------------------------------------------------------------------------------------------------------------------A---TAACAACTAC---------------------------------------------------.......................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................AGCAACAG---C---------AA-------------------------------------------------------------------CAGCC-GCCG------C..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCACAGCAATGCCAGCA--------------------------------------------------------------------------------------------------AGCAG.............................................2311.0010000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................TCATCGA-------------------------------------GCCGC---AG------------------------CAGCAACAG---C---------AA-------------------------------------------------------------------C..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................TAATCATCGA-------------------------------------GCCGC---AG------------------------CAGCAACAG---C---------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................C---AG------------------------CAGCAACAG---C---------AA-------------------------------------------------------------------CAGCC-G....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2121.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
..................................................................................................................................................................................................................................................................CAACAG---C---------AA-------------------------------------------------------------------CAGCC-GCCG------CA------------------------------------------GC------AGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......TT--------------------------------------------------------------------------------------------------------------------------------------------------------------------GATAATCATCGA-------------------------------------GCCGC---AG------------------------CAGCAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATGCCAGCA--------------------------------------------------------------------------------------------------AGCAGGCAGC........................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATGCCAGCA--------------------------------------------------------------------------------------------------AGCAGGCAGCAC---------------------------------A....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCACAGCAATGCCAGCA--------------------------------------------------------------------------------------------------AGCAGGCAGCA.......................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................AGCC-GCCG------CA------------------------------------------GC------AGCAG---------------------------------------------------------------------------------------------------------CA----------------------------...........................................................................................................................................................................................................................................................................................................................................................................................19120.4250000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................AGCC-GCCG------CA------------------------------------------GC------AGCAG---------------------------------------------------------------------------------------------------------CA----------------------------A..........................................................................................................................................................................................................................................................................................................................................................................................2050.4020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................CG------CA------------------------------------------GC------AGCAG---------------------------------------------------------------------------------------------------------CA----------------------------ACAGT......................................................................................................................................................................................................................................................................................................................................................................................1840.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................G------------------------CAGCAACAG---C---------AA-------------------------------------------------------------------CAGCC-G....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1950.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................C---AG------------------------CAGCAACAG---C---------AA-------------------------------------------------------------------CAGCC-.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2050.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................C---AG------------------------CAGCAACAG---C---------AA-------------------------------------------------------------------CAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000
......................................................................................................................................................................................................................................G------------------------CAGCAACAG---C---------AA-------------------------------------------------------------------CAGCC-.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................GCC-GCCG------CA------------------------------------------GC------AGCAG---------------------------------------------------------------------------------------------------------CA----------------------------...........................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AATTAAATTGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACAGC-----------------------------------------------------------------ATCAGGTGCAGCAAGTGCAGCAGGT-------------------------------------------------TCACTATCAGCAGCAGCAACAGGAGCCCCA-GCAG------CA------------------------------------------GC---------AG---------------------------------------------------------------------------------------------------------CA-------------ACA------------ACTG--------------CACATGGAG-------------------------------------------------------------------------------------------------------------------------------C------------------------AACAGCAGCAGCAGCAGCAATATGTGCAGCATCAGCCGCAGCAAC---------------CCGC----------------------------------------------------------------------------------------CATCCAGCATACGCAGCAGATTTACTACACTTCCGAGCAAGTCCTGCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................................................................................................................................................................................................................................CAGGT-------------------------------------------------TCACTATCAGCAGCAGCAACAGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000001000000000
.......................................................................................................................................................................................................................................................................................................................................TCAGCAGCAGCAACAGGAGCCCCA-GCAG------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACATGGAG-------------------------------------------------------------------------------------------------------------------------------C------------------------AACAGCAGCAGCAGCC........................................................................................................................................................................................2611.00100000000001000000
droSec2
AGCAACTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------GATAATCATCGA-------------------------------------GCCGC---AG------------------------CAGCAACAG---C---------AA-------------------------------------------------------------------CAGCC-GCAG------CA------------------------------------------GC------AGCAG---------------------------------------------------------------------------------------------------------CA----------------------------ACAGTTCAGCTACCACAGCAACAGCAGCA----------------------------------------------------------------------------------------------------------------------A---TAACAACTAC---------------------------------------------------TACCACAGCAATGGCAGCA--------------------------------------------------------------------------------------------------AGCAGGCAGCAC---------------------------------ACGCCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................................................................................................................................................................................................................................................GCAACAG---C---------AA-------------------------------------------------------------------CAGCC-GCAG------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1940.2511000
droYak3
AATAAGTCA-----------------------------------------------------------------------------------------------TTGTATAAAC---C------------ATGTTCAT----ATC-TTATTT--------------------------------GAACTGT--------------------------------------------GACGCCAGCAGCCACAGCAACAGCAACAGCAGCAGCAACC----------------------------------------------ACACTGATACCTGCAACAACTTGAGCTGCA-GCAG------C---------------------------------------------------------------------------------------------------------------------------------------------------------AGCAA---CA-------------ACA------------CTGA--------------TACCTGCAA------------------CA----------------------------------------------------------------------------------------ACT---------T---GAGC------------------------T---------------------------------------GC--------------------------------------------------------------------------------------------------AGCAGCAGCAACAACACTGATA---------------------------------CCTGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................................................................................................................................................................................................................................................................AGCAACAGCAGCAGCAACC----------------------------------------------AC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.33101000000000
................................................................................................................................................................................................................................................................AGCAACAGCAGCAGCAACC----------------------------------------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19110.09100000100000
droEre2
AGCAACTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------GATAATCATCGA-------------------------------------GCCGC---AG------------------------CAGCAACAG---C---------AA--CAGCAGCACCAGC-------------------------------C----------------------GCC-GCAG------CA------------------------------------------GC------AGCAG---------------------------------------------------------------------------------------------------------CA----------------------------ACAGTTCAGCTACCACAGCAACAGCAGCA----------------------------------------------------------------------------------------------------------------------A---TAACAACTAC---------------------------------------------------TACCACAGCAATGCCAGCA--------------------------------------------------------------------------------------------------AGCAGGCAGCAC---------------------------------ACGCCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............................................................................................................................................................................................................................................................CAGCAACAG---C---------AA--CAGCAGCACCAGC-------------------------------C----------------------GC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010100000
.....CTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------GATAATCATCGA-------------------------------------GCCGC---AG------------------------C.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
..................................................................................................................................................................................CATCGA-------------------------------------GCCGC---AG------------------------CAGCAACAG---C---------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010001000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACCACAGCAACAGCAGC...............................................................................................................................................................................................................................................................................................................................................................1911.0010000010
.................................................................................................................................................................................................................................................................GCAACAG---C---------AA--CAGCAGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0511000000

Generated: 06/11/2015 at 05:29 PM