ID:

dmo_2141

 Coordinate:

scaffold_6540:31374914-31375064 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.6 -7.2 -6.9 -6.9

Flybase annnotation

exon [dmoj_GLEANR_10598:2]; CDS [Dmoj\GI10692-cds]; intron [Dmoj\GI10692-in]

Repeatable elements

NameClassFamilyStrand
(A)nSimple_repeatSimple_repeat+
mature
star
  1. scaffold_1693:1499-1521 +
  2. scaffold_4272:4221-4243 +
  3. scaffold_5828:2524-2546 +
  4. scaffold_6441:47149-47171 +
  5. scaffold_6460:2390-2412 +
  6. scaffold_6473:27548-27570 +
  7. scaffold_6473:2753713-2753735 +
  8. scaffold_6473:4446375-4446397 +
  9. scaffold_6473:8355345-8355367 +
  10. scaffold_6473:14679621-14679643 +
  11. scaffold_6493:127555-127577 +
  12. scaffold_6496:10617289-10617311 +
  13. scaffold_6496:15861583-15861605 +
  14. scaffold_6496:16696087-16696109 +
  15. scaffold_6496:21578014-21578036 +
  16. scaffold_6500:7617605-7617627 +
  17. scaffold_6500:9991586-9991608 +
  18. scaffold_6540:30084040-30084062 +
  19. dmo_2141  scaffold_6540:31374962-31374984 +
  20. scaffold_6680:15427655-15427677 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TCTATATTCGAATTGAAGAAGGCTAAATAAAGAAAACAAATTAAAAACTTTCCGGTTGCCTTACTGTTTTATTTTATTACATGAGTCAATGCAAATATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATGGCGGGCGGCATTTTTTATTGATTTCACTTGTGACTAACTGTACCTTGTTGTTGTTTACTTTTCTGCAGCAAATTTCTGAGCCCGAGCAACTCCGCAAACTGTTCATTGGCGGTTTGGA
**************************************************************************************************((....................(((......(((((((((..(((((..((((...........))))..)).))).))).))))))......)))))******************************************************* 		Read size # Mismatch Hit Count Total Norm Total M060
embryo
 M046
female body
 V110
male body		 V056
head
 V041
embryo
..........................................................................................................................................................................................................AAATTTCTGAGCCCGAGCAACTCCGC....................... 26 0 1 1.00 1 0 1 0 0 0
...........................................................................................................................................................................................................AATTTCTGAGCCCGAGCA.............................. 18 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................................................ACTCCGCAAACTGTTCATTG.......... 20 0 1 1.00 1 0 1 0 0 0
.................................................................................................................................................................................TTGTTGTTGTTTACTTTTC....................................................... 19 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................ACCTTGTTGTTGTTTACTTTTC....................................................... 22 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................TTTGTGACTGACAGTACCTTGT...................................................................... 22 3 1 1.00 1 0 0 0 1 0
........................................................................................................................................................................................................GCAAATTTCTGAGCCCGAGCAACT........................... 24 0 1 1.00 1 0 0 1 0 0
....................................................................................................................................................................................TTGTTGTTTACTCTTATGCAGA................................................. 22 3 5 0.20 1 0 0 1 0 0
................................................................................................CTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAT....................................................................................................................... 36 1 6 0.17 1 0 0 0 0 1
.............................AAGAACACCAATTAAAAACT.......................................................................................................................................................................................................... 20 2 8 0.13 1 0 1 0 0 0
............................................................................................AAATATGATGAAAAAAAAAAAAGAAAAAAAAAAAAA........................................................................................................................... 36 3 9 0.11 1 0 0 0 0 1
.............................................................................................AATAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA.......................................................................................................................... 36 1 20 0.10 2 0 0 0 2 0
.....................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAATAACTGGCG................................................................................................................... 35 2 11 0.09 1 0 0 0 0 1
..................................................................................................GAAAAAAAAAAAAAAAAAAAAAA.................................................................................................................................. 23 0 20 0.05 1 0 1 0 0 0
.................................................................................................TGAAAAAAATAAAAAAAAAAAAAAAAAAAAAAAATA...................................................................................................................... 36 2 20 0.05 1 0 0 0 0 1
.............................................................................................AAAATGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA.......................................................................................................................... 36 1 20 0.05 1 0 0 0 0 1
............................................................................................CAATATGATAAAAAAAAAAAAAAAAAAAA.................................................................................................................................. 29 2 20 0.05 1 0 1 0 0 0
...........................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAT....................................................................................................................... 25 0 20 0.05 1 0 1 0 0 0

Anti-sense strand reads

AGATATAAGCTTAACTTCTTCCGATTTATTTCTTTTGTTTAATTTTTGAAAGGCCAACGGAATGACAAAATAAAATAATGTACTCAGTTACGTTTATACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACCGCCCGCCGTAAAAAATAACTAAAGTGAACACTGATTGACATGGAACAACAACAAATGAAAAGACGTCGTTTAAAGACTCGGGCTCGTTGAGGCGTTTGACAAGTAACCGCCAAACCT
*******************************************************((....................(((......(((((((((..(((((..((((...........))))..)).))).))).))))))......)))))************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M060
embryo
 M046
female body
 V041
embryo
....................................................................................................................TTTTTTTTTATTTCTACCGCCC................................................................................................................. 22 2 3 0.33 1 1 0 0
........................................................................................................TTTTTTTTTTTTTTTTTTTTTTTTTTTA....................................................................................................................... 28 0 20 0.15 3 3 0 0
......................................................................................................................................TCCCGCCGAAAAAAATAA................................................................................................... 18 2 11 0.09 1 0 1 0
.......................................................................................................................................CCCGCCGAAAAAAATAAACA................................................................................................ 20 3 20 0.05 1 0 1 0
................................................................................................TACTTTTTTTTTTTTTTCTTTTTTTTTTTTTCT.......................................................................................................................... 33 2 20 0.05 1 0 0 1
..........................................................................................................TTTTTTTTTTTTTTTTTTTTTTTTTAC...................................................................................................................... 27 0 20 0.05 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6540:31374864-31375114 + dmo_2141 TCTATATT-CG-AA-------------------------------------------------------------TTGAA--------GAAG-------------------------------------GCTAAATAA-----------------------------------------AGAAAACAA----A----------------TT-------------------------------AA--------------------AA-------------A----CTTTCCGGTTGCCTTACTGT-------------------------------TTT------ATTT------------------------------------------TATTAC-------ATGAGTCAATGCAAATATGAAAA--AAAAAAAAA------------------------AAAAAAAAAAAAAAAAAAATGGCGGGCGGCAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----TTT------------------------TATTGATTTCACTTGTGACTAACTGTACCT------TGTT--------------------------------GTTGT--TTACTTT---TCTGCAGCAAATTTCTGAGCCCGAGCAACTCCGCAAACTGTTCATTGGCGGTTTGGA
droVir3 scaffold_13047:9258854-9259097 - dvi_16121 GCCAATGC-CC-GA-------------------------------------------------------------TT-------AATACAG--------------------------------------GACAAATGA-----------------------------------------TGACAGGAA---------------------------------------------------T--GA--------------------AT-------------G--T-CGTGCCGGTTGCCCTAATTTCAG-------------A-AAAC-------------------------------------------------------AAATAAAAATTGTAC-------ATGCGGCAATGCAAAT------GTTA------------------AAAA------------------------GAAAATGGCGGGCGGCTTTTTTTTTTAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCGATTTCACTTGTGACTAACTGTACTC------TCTT--------------------------------GTTTA--TTTTTTT---TTTCCAGCAAATTTCTGAGCCCGAGCAGCTACGTAAGCTGTTTATCGGCGGTTTGGA
droGri2 scaffold_14906:3986910-3987229 + TTGATGCT-AC-CAA------------------------------------------------------------TTTAA-----CTTGAT--------------------------------------A------------------------------------------------------------------------------------------------TAATATAATAAAGT--AG-AATTTATACCATATATCGGCA-----------------------------------------------------------------------A------CATTCGCAAAGCAAAAGAGTAAGTAAAATAATAAAACAAAGAAAAAAATTACGCTTAATGTGCGGCAATGCAAAT------AATC------------------GAAA------------------------GAAAATGGCGGGCGGTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----TTTTTGTTATATATGTACATATGTATGTATTGATTTCACTTATGACTAACTGTACCC------TGTTTTTGTT-G-TTGCTGCTATT-----GTTTGTTGTTGCTGTGATT-----GTTTTAGCAAATTTCGGAACCCGAGCAGCTACGTAAGCTGTTTATCGGCGGCTTGGA
droWil2 scf2_1100000004943:6569938-6570279 - TCCAAGTA-TA-AA-TGTACATATATTATATATATTGGGTCAGCGACTTGGGCATTTTTCGAATTTCTTGTTCGACA-------AATAAAG--------------------------------------G-CAA---------------------------------------------AC-----A--------------------AGCCGAAGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTATAAGGGATGGAGGAA-----------------GAAAAG----AGAGAAAAAACATGT---ACTTACTCACGCATACATACATACAAC-------AAGCAGAGA-AAAAA---------AAAATGGCGGCTTTTTTTTTTTTG---TAT-------------TTTATTGATTTCACTTGTGAC----TGTACCTGAGAATTA---ATGTTTTGTTGT---TATTCTGTTTTGTTTCGTTTA--TCATTATCTACCTGCAGCAGATCTCTGAGCCAGAGCAGCTGCGTAAACTGTTTATTGGTGGCTTGGA
dp5 2:16926332-16926500 - AAATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAA------------------------GAAAATGGCGGGCGGCATTTTTCTTTGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTATTGATTTCACTTGCGAC----TGTACCTGAAAATTGCTTATGTTTGTTTGTTTTTATT-----TTACCTCGTTCT--TGACT-----CTCGCAGCAGATTACCGAGCCGGAGCAGCTGCGCAAGCTGTTCATCGGCGGTCTGGA
droPer2 scaffold_69:105857-106011 + TCTACATA-TT-GA-----------------------------------------------------------------ACTTAAA--AAAA-----------------------------------AAA----A---------------------------------------------------------------------------------------------CAAAACAAAAAC--GA--------------------AA-------------GGATC-C-----------------TCCT-------------A-AAAGCGAAA----AAT------CTCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTCCAAATCAAAAGGAAA----GCA------AAGCAAAGCGA-----------------------AAGA-------------AAA-GAAAGAAAAGCTAAGCAAAGGCGGCATT----CTT------------------------TGGTCGTTCT-------------------------------------------------------------------------------------------------------------------------------------ATT
droAna3 scaffold_12943:1439644-1439765 + AAGCTAAG-CA-A----------------------------------------------------------------------------------------------------------------------------------------------------------------------AC--------------------------AACAGAAGC-----------C--------------GA--------------------CAGCCTCAAGTTGCGGCTTC-G-----------------TTAC-------------A-GATAAAGTTCATTCGATTTAATGATGC----------------------------------------------------------------GCCAAAATTAAAATTAAAAAAAAA------------------------GAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATA---AGCAA-AAAAA----------AAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droBip1 scf7180000396712:2298043-2298205 + TGCGCCTT-TG-CA----------------------------------------------------------------AA--------AAAG-------------------------------------GTTAATT-------------------------------ACAAAAGAAAAA----------------------------AACTGGAACCGGCTG--TGCCGAAAAAAAAAAC--A----------C-ATACATATA----------------------------------------CAC-ACATACATACACA-ATGGCTGTCATGGCGG--TGAC-------------------------------------------------------------------------------------AAAAAAAAAAAAAAATCGAAAA------------------------GAAAATGGCGGGCGGCAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----GTC------------------------TG----------------------------------------------------------------------------------------------------------------------------------------------TT
droKik1 scf7180000302621:68600-68748 + ATATTTGT-TA-AA--------------------------------------------------------------------------TAAA-----------------------------------GAGACAAATAA-----------------------------------------AAACAACAA----T----------------TT-------------------------------GA--------------------GA-------------AGATA-C-----------------GCAA-------------G-TAAAAAGT------TC------ACAT---------------------------------------------------------TC------------------------------------------------------------------------------G-----------------CCTGAAGTTTGGCAACGTTTACT------------TTTTCAATGATGAA---------------------GAAAAC----GAAGAAAAGATA-----------------------------AAGA-------AAACAGAAATAAAAA----------AATG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000453172:1681-1805 + AAAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAAGAAAAACGAAAATA-------------------------ACAAAAATTGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAGTTGGAGAAAGTCGTGGC----AGTAGTTGCGTCATGTTTAAGTTT----------------------------------ACC-----ATTAAAGTTAATTGCAGGGCTCGAGGCCCTTCGGCAATTAT----------------
droEle1 scf7180000491214:3008133-3008278 - TTTATGCT-GT-AA-------------------------------------------------------------TTAAA--------TAAA-----------------------------------ATAATAAATAA-----------------------------------------AAAAATTAATGCATTTTATGATTTTTAG--------------------------------------------------------------------------------------------------------------------------------TTG------CTTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTTTAAACGTTTTAAAGGATAAATAAATGGCTTTAATCCAAAAAAGAA----ACA------AAACAAAAAAA-----------------------A----------T---AATAA-AAAAA----------AGAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000763260:604-672 + AAAAATAA-TA-AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT-------------------------------AAAA------------------------AAAAAAAATCGACAGCGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----ACT------------------------CGAGGAATTTAGTTGTGAACAACTGTGC----------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000301505:488053-488133 - TTTCTTTC-AC-TT-------------------------------------------------------------------------------------------------------TTTTTTCT-------TA---------------------------------------------GC-----T---------------------------------------C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCGCAGGCGGTTCGAGCAATAGTGA---------------------AAAAGAAAG----AAA------------------------------------------AAA---AGTGA-AAACA----------AAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000414432:12593-12718 - TTTATGTC-TG-AA-----------------------------------------------------------------GTTTTGATAGAA--------------------------------------G------------------------------------------------------------------------------------------------CCAAAAAGCAAAGC--GA--------------------GA-------------ACATA-T-----------------TCAT-------------A-AAATAAGTCAAGGCGA--CAACAACGC------------------------------------------------------ACCTAGTAAATTAA-------------------------------AAAAAAAAAAATCAGAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAA-AATAA----------AAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEug1 scf7180000409462:2916722-2916833 - TTAAACTT-A---A--------------------------------------------------------------------------TGAA---------GAAATAAAGTGTTCAAGTTATT---------------------------------------------------------------------------------------------------------------AAAAGT--TT--------------------TA-------------GTGTT-T-----------------TTTT-------------A-AAAC--------------------------------------------------------------------------------AAACAAATCAAAAATAAAAA--AAAGTGAAA------------------------ACCAAAAAACGAAACAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chrX:16570550-16570659 - ATTCGCAC-TG-AA-----------------------------------------------------------------AAATCGA---------------------------------------------------A-----------------------------------------AAAAAACCA----C----------------TT-------------------------------GT--------------------AA-------------A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTAATGGTTGTGCCATTAATTGCGGCAAGACTTACACAAA---------------------AAAAAAAAG------AAAC---------------------------------------AAA---AAAAA-AGGCA----------AAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droSim2 3r:11693546-11693646 + ATCTATTTCGC-TT-------------------------------------------------------------------------------------------------------TATATTCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTCCT------GAAT--------------------------------GCAT---TTAAAAT---TCACCCGCAGATCACCGAGCCAGAGCAGCTGCGCAAACTGTTCATCGGCGGCCTGGA
droSec2 scaffold_0:12520945-12521160 + TCCCTGTG-CG-AA-------------------------------------------------------------TTTAA--------CCAG---------CT----------T---CAAGTTTA--------TTG--ACCTCTTTTGGCGAGAAATATACGTAATTTCCGATGAAAA-----------------------------AGTTG---CCGGCTGTTTGCTGAAAAAGAAAAC--GAAAATTCATAC-ATACATATG----------------------------------------CATTGTATACATGTACACATGGCTGTCATG--------------------------------------------------------------------------GCGGTGCAAAT------AGTAAAAAAAAA------------------------AAAAAAAAAAAAAAAAAAATGGCGAGCGGCTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----TTC------------------------T-------------------------------------------------------------------------------------------------------------------------------------------------
droYak3 v2_chrUn_2097:189-317 - TTTACTTA-TTTAA-----------------------------------------------------------------A--------TAT-------------------------------TCAATTAT----A-------------------------------------------------------------------------------------------CTAAATAAC--ATTTTTA--------------------AA-------------A--TT-T-----------------TCCA-------------A-AATTTTAGG----CTT------CTAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTCTGGGCCAAAGCAAAT----ACG------ATACAAAAAAA-----------------------AAAAAAAAGGAC---GACGA-AAGAG----------CGGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEre2 scaffold_4644:1861011-1861131 + ACACTGA-----AA-------------------------------------------------------------TTCAC--------GGAGGTTCGTTAAAAAAAAAAATTT-----------------------------------------------------------------------------TTTTTTTTAATTTTTAT--------------------------------------------------------------------------------------------------------------------------------TTT------CTTT------------------------------------------TTTTTC-------ATCAAAAAGTGCAAAAATTCAAA--AAAAAAAAA------------------------AAAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAA-AAAAA----------AAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
TCTATATT-CG-AA-------------------------------------------------------------TTGAA--------GAAG-------------------------------------GCTAAATAA-----------------------------------------AGAAAACAA----A----------------TT-------------------------------AA--------------------AA-------------A----CTTTCCGGTTGCCTTACTGT-------------------------------TTT------ATTT------------------------------------------TATTAC-------ATGAGTCAATGCAAATATGAAAA--AAAAAAAAA------------------------AAAAAAAAAAAAAAAAAAATGGCGGGCGGCAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----TTT------------------------TATTGATTTCACTTGTGACTAACTGTACCT------TGTT--------------------------------GTTGT--TTACTTT---TCTGCAGCAAATTTCTGAGCCCGAGCAACTCCGCAAACTGTTCATTGGCGGTTTGGASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTTCTGAGCCCGAGCAACTCCGC.......................2611.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTCTGAGCCCGAGCA..............................1811.001000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCCGCAAACTGTTCATTG..........2011.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T------TGTT--------------------------------GTTGT--TTACTTT---TC.......................................................1911.001000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCT------TGTT--------------------------------GTTGT--TTACTTT---TC.......................................................2211.001000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAATTTCTGAGCCCGAGCAACT...........................2411.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAA--AAAAAAAAA------------------------AAAAAAAAA............................................................................................................................................................................................................................................................................................................................................................................................23200.051100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAA------------------------AAAAAAAAAAAAAAAAAAAT.................................................................................................................................................................................................................................................................................................................................................................................25200.051100000
droVir3
GCCAATGC-CC-GA-------------------------------------------------------------TT-------AATACAG--------------------------------------GACAAATGA-----------------------------------------TGACAGGAA---------------------------------------------------T--GA--------------------AT-------------G--T-CGTGCCGGTTGCCCTAATTTCAG-------------A-AAAC-------------------------------------------------------AAATAAAAATTGTAC-------ATGCGGCAATGCAAAT------GTTA------------------AAAA------------------------GAAAATGGCGGGCGGCTTTTTTTTTTAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCGATTTCACTTGTGACTAACTGTACTC------TCTT--------------------------------GTTTA--TTTTTTT---TTTCCAGCAAATTTCTGAGCCCGAGCAGCTACGTAAGCTGTTTATCGGCGGTTTGGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTACGTAAGCTGTTTATCGGCG.......2412.002001000000000000000000000000000000000000000000000000000000001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAATTTCTGAGCCCGAGCAGC............................2412.002000100000000010000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTTCTGAGCCCGAGCAGC............................2112.002000000000001000100000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTACGTAAGCTGTTTATCGGCGGTT....2611.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAATTTCTGAGCCCGAGC...............................2011.001000000000000000001000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGTAAGCTGTTTATCGGCGGT.....2411.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTACGTAAGCTGTTTATCGGCGGT.....2611.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAATTTCTGAGCCCGAGCAGC............................2311.001000100000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTTTATCGGCGGT.....1511.001000000000000000000000000000000000000000000000000000000000000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTTCTGAGCCCGAGCAG.............................2011.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGAGCAGCTACGTAAGCT..................1911.001000000000000010000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTTCTGAGCCCGAGCAGCTACGTAA.....................2811.001000000000000000100000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTACGTAAGCTGTTTATCGGC........2211.001000100000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGACTAACTGTACTC------TCTT--------------------------------GTTTA--TTTTTTT---TTTCAG...................................................3911.001000000000000000000000000000000000000000000000010000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACGTAAGCTGTTTATCGGC........2011.001000000000000000000000000000000000000000000000000000000000001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTAAGCTGTTTATCGGC........1911.001000100000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAATTTCTGAGCCCGAGCAGCTACGTAAGCTGTTTATCGGCG.......4511.001000000000000000000000000000000000000000000000000000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGTAAGCTGTTTATCGGCG.......2211.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAATTTCTGAGCCCGAGCAG.............................2311.001001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCCCGAGCAGCTACGTAAGCTGTT...............2711.001000000000000000000000000010000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTACGTAAGCTGTTTATCGGCGGT.....2511.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTATCGGCGGTTTGGC1811.001000000000000000000000000000000000000000000000000000000000000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAATTTCTGAGCCCGAGC...............................1911.001000100000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAATTTCTGAGCCCGAGCA..............................2211.001000000000000010000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTTCTGAGCCCGAGCA..............................1811.001000000000000000000000000000000000000100000000000000000000000000
..........C-GA-------------------------------------------------------------TT-------AATACAG--------------------------------------GACAAAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000001000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................GTTA------------------AAAA------------------------GAAAATG................................................................................................................................................................................................................................................................................................................................................................................15180.173000000000000000000000000000000000000000000000000020000000100000
droGri2
TTGATGCT-AC-CAA------------------------------------------------------------TTTAA-----CTTGAT--------------------------------------A------------------------------------------------------------------------------------------------TAATATAATAAAGT--AG-AATTTATACCATATATCGGCA-----------------------------------------------------------------------A------CATTCGCAAAGCAAAAGAGTAAGTAAAATAATAAAACAAAGAAAAAAATTACGCTTAATGTGCGGCAATGCAAAT------AATC------------------GAAA------------------------GAAAATGGCGGGCGGTTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----TTTTTGTTATATATGTACATATGTATGTATTGATTTCACTTATGACTAACTGTACCC------TGTTTTTGTT-G-TTGCTGCTATT-----GTTTGTTGTTGCTGTGATT-----GTTTTAGCAAATTTCGGAACCCGAGCAGCTACGTAAGCTGTTTATCGGCGGCTTGGASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
TCCAAGTA-TA-AA-TGTACATATATTATATATATTGGGTCAGCGACTTGGGCATTTTTCGAATTTCTTGTTCGACA-------AATAAAG--------------------------------------G-CAA---------------------------------------------AC-----A--------------------AGCCGAAGC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGTATAAGGGATGGAGGAA-----------------GAAAAG----AGAGAAAAAACATGT---ACTTACTCACGCATACATACATACAAC-------AAGCAGAGA-AAAAA---------AAAATGGCGGCTTTTTTTTTTTTG---TAT-------------TTTATTGATTTCACTTGTGAC----TGTACCTGAGAATTA---ATGTTTTGTTGT---TATTCTGTTTTGTTTCGTTTA--TCATTATCTACCTGCAGCAGATCTCTGAGCCAGAGCAGCTGCGTAAACTGTTTATTGGTGGCTTGGASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGCGTAAACTGTTTATTGGT........2313.00300030
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--TCATTATCTACCTGCAGCAGATCTCT.........................................2711.00100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTCTGAGCCAGAGCAGCTGC.........................2311.00100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGCGTAAACTGTTTATTGGTGGC.....2611.00100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCTGAGCCAGAGCAGCTGCG........................2311.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCGTAAACTGTTTATTGGT........2211.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCAGAGCAGCTGCGTAAACT..................2111.00100100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTCTGAGCCAGAGCAGCTGCGT.......................2511.00100010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAGGGATGGAGGAA-----------------GA...................................................................................................................................................................................................................................................................................1811.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTCTGAGCCAGAGCAGCTGCGTAAAC...................2711.00101000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGATCTCTGAGCCAGA.................................1911.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCGTAAACTGTTTATTGGTGG......2411.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGATCTCTGAGCCAGAGC...............................2011.00100010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTGTTTATTGGTGGCTTG..2011.00100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCCAGAGCAGCTGCGTA......................2011.00100100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGCGTAAACTGTTTATT...........2011.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGAGCCAGAGCAGCTGCGTAAACT..................2511.00100100
dp5
AAATA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAA------------------------GAAAATGGCGGGCGGCATTTTTCTTTGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTATTGATTTCACTTGCGAC----TGTACCTGAAAATTGCTTATGTTTGTTTGTTTTTATT-----TTACCTCGTTCT--TGACT-----CTCGCAGCAGATTACCGAGCCGGAGCAGCTGCGCAAGCTGTTCATCGGCGGTCTGGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGAGCCGGAGCAGCTGCGCAAGC...................2513.0030300000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTCGTTCT--TGACT-----CTCGCAG..................................................2211.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCCGGAGCAGCTGCGCAAGCTGTT...............2611.0010100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGATTACCGAGCCGGAGC...............................2111.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTACCGAGCCGGAGCAGCT...........................2011.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTACCGAGCCGGAGCAG.............................1811.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACCTCGTTCT--TGACT-----CTCGC....................................................2211.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGATTTCACTTGCGAC----TG.........................................................................................................................2011.0010100000000
droPer2
TCTACATA-TT-GA-----------------------------------------------------------------ACTTAAA--AAAA-----------------------------------AAA----A---------------------------------------------------------------------------------------------CAAAACAAAAAC--GA--------------------AA-------------GGATC-C-----------------TCCT-------------A-AAAGCGAAA----AAT------CTCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTCCAAATCAAAAGGAAA----GCA------AAGCAAAGCGA-----------------------AAGA-------------AAA-GAAAGAAAAGCTAAGCAAAGGCGGCATT----CTT------------------------TGGTCGTTCT-------------------------------------------------------------------------------------------------------------------------------------ATTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
AAGCTAAG-CA-A----------------------------------------------------------------------------------------------------------------------------------------------------------------------AC--------------------------AACAGAAGC-----------C--------------GA--------------------CAGCCTCAAGTTGCGGCTTC-G-----------------TTAC-------------A-GATAAAGTTCATTCGATTTAATGATGC----------------------------------------------------------------GCCAAAATTAAAATTAAAAAAAAA------------------------GAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATA---AGCAA-AAAAA----------AAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads
droBip1
TGCGCCTT-TG-CA----------------------------------------------------------------AA--------AAAG-------------------------------------GTTAATT-------------------------------ACAAAAGAAAAA----------------------------AACTGGAACCGGCTG--TGCCGAAAAAAAAAAC--A----------C-ATACATATA----------------------------------------CAC-ACATACATACACA-ATGGCTGTCATGGCGG--TGAC-------------------------------------------------------------------------------------AAAAAAAAAAAAAAATCGAAAA------------------------GAAAATGGCGGGCGGCAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----GTC------------------------TG----------------------------------------------------------------------------------------------------------------------------------------------TTSizeHit CountTotal NormTotal
No Reads
droKik1
ATATTTGT-TA-AA--------------------------------------------------------------------------TAAA-----------------------------------GAGACAAATAA-----------------------------------------AAACAACAA----T----------------TT-------------------------------GA--------------------GA-------------AGATA-C-----------------GCAA-------------G-TAAAAAGT------TC------ACAT---------------------------------------------------------TC------------------------------------------------------------------------------G-----------------CCTGAAGTTTGGCAACGTTTACT------------TTTTCAATGATGAA---------------------GAAAAC----GAAGAAAAGATA-----------------------------AAGA-------AAACAGAAATAAAAA----------AATG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
AAAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAAGAAAAACGAAAATA-------------------------ACAAAAATTGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAGTTGGAGAAAGTCGTGGC----AGTAGTTGCGTCATGTTTAAGTTT----------------------------------ACC-----ATTAAAGTTAATTGCAGGGCTCGAGGCCCTTCGGCAATTAT----------------SizeHit CountTotal NormTotal
No Reads
droEle1
TTTATGCT-GT-AA-------------------------------------------------------------TTAAA--------TAAA-----------------------------------ATAATAAATAA-----------------------------------------AAAAATTAATGCATTTTATGATTTTTAG--------------------------------------------------------------------------------------------------------------------------------TTG------CTTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTTTAAACGTTTTAAAGGATAAATAAATGGCTTTAATCCAAAAAAGAA----ACA------AAACAAAAAAA-----------------------A----------T---AATAA-AAAAA----------AGAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
AAAAATAA-TA-AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTT-------------------------------AAAA------------------------AAAAAAAATCGACAGCGT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----ACT------------------------CGAGGAATTTAGTTGTGAACAACTGTGC----------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
TTTCTTTC-AC-TT-------------------------------------------------------------------------------------------------------TTTTTTCT-------TA---------------------------------------------GC-----T---------------------------------------C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCGCAGGCGGTTCGAGCAATAGTGA---------------------AAAAGAAAG----AAA------------------------------------------AAA---AGTGA-AAACA----------AAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
TTTATGTC-TG-AA-----------------------------------------------------------------GTTTTGATAGAA--------------------------------------G------------------------------------------------------------------------------------------------CCAAAAAGCAAAGC--GA--------------------GA-------------ACATA-T-----------------TCAT-------------A-AAATAAGTCAAGGCGA--CAACAACGC------------------------------------------------------ACCTAGTAAATTAA-------------------------------AAAAAAAAAAATCAGAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAAA-AATAA----------AAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
TTAAACTT-A---A--------------------------------------------------------------------------TGAA---------GAAATAAAGTGTTCAAGTTATT---------------------------------------------------------------------------------------------------------------AAAAGT--TT--------------------TA-------------GTGTT-T-----------------TTTT-------------A-AAAC--------------------------------------------------------------------------------AAACAAATCAAAAATAAAAA--AAAGTGAAA------------------------ACCAAAAAACGAAACAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
ATTCGCAC-TG-AA-----------------------------------------------------------------AAATCGA---------------------------------------------------A-----------------------------------------AAAAAACCA----C----------------TT-------------------------------GT--------------------AA-------------A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTTAATGGTTGTGCCATTAATTGCGGCAAGACTTACACAAA---------------------AAAAAAAAG------AAAC---------------------------------------AAA---AAAAA-AGGCA----------AAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA---------------------AAAAAAAAG------AAAC---------------------------------------AAA---AAAAA-A............................................................................................................................................................................................................2521.0020000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------AAAAAAAAG------AAAC---------------------------------------AAA---AAAA...............................................................................................................................................................................................................2120.5010000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---------------------AAAAAAAAG------AAAC---------------------------------------AAA---AAA................................................................................................................................................................................................................2140.5020000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA---------------------AAAAAAAAG------AAAC---------------------------------------AAA---A..................................................................................................................................................................................................................20170.2440000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
ATCTATTTCGC-TT-------------------------------------------------------------------------------------------------------TATATTCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTCCT------GAAT--------------------------------GCAT---TTAAAAT---TCACCCGCAGATCACCGAGCCAGAGCAGCTGCGCAAACTGTTCATCGGCGGCCTGGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCGCAAACTGTTCATCGGC........2111.00100000000100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGCAAACTGTTCATCGGCGGCCTG..2611.00100000000000010000
.........................................................................................................................TTCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTTCCT------GAAT--------------------------------GCAT---TTAAAAT---T........................................................2811.00100000000010000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGCAAACTGTTCATCGGCGGCCTGT.2711.00100000000000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCGAGCCAGAGCAGCTG..........................1811.00110000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCAGCTGCGCAAACT..................1720.50100000001000000000
droSec2
TCCCTGTG-CG-AA-------------------------------------------------------------TTTAA--------CCAG---------CT----------T---CAAGTTTA--------TTG--ACCTCTTTTGGCGAGAAATATACGTAATTTCCGATGAAAA-----------------------------AGTTG---CCGGCTGTTTGCTGAAAAAGAAAAC--GAAAATTCATAC-ATACATATG----------------------------------------CATTGTATACATGTACACATGGCTGTCATG--------------------------------------------------------------------------GCGGTGCAAAT------AGTAAAAAAAAA------------------------AAAAAAAAAAAAAAAAAAATGGCGAGCGGCTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----TTC------------------------T-------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAA------------------------AAAAAAAAAAAAAAAAAAA..................................................................................................................................................................................................................................................................................................................................................................................25200.751515000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAA------------------------AAAAAAAAAAAAAAA......................................................................................................................................................................................................................................................................................................................................................................................23200.551111000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AGTAAAAAAAAA------------------------AAAAAAAA.............................................................................................................................................................................................................................................................................................................................................................................................20200.0511000
droYak3
TTTACTTA-TTTAA-----------------------------------------------------------------A--------TAT-------------------------------TCAATTAT----A-------------------------------------------------------------------------------------------CTAAATAAC--ATTTTTA--------------------AA-------------A--TT-T-----------------TCCA-------------A-AATTTTAGG----CTT------CTAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCTCTGGGCCAAAGCAAAT----ACG------ATACAAAAAAA-----------------------AAAAAAAAGGAC---GACGA-AAGAG----------CGGG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGCCAAAGCAAAT----ACG------ATACAAA.............................................................................................................................................................................................................................................................25200.05101000000000
.TTACTTA-TTTAA-----------------------------------------------------------------A--------TAT-------------------------------TCAATTAT----A-------------------------------------------------------------------------------------------C...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05101000000000
droEre2
ACACTGA-----AA-------------------------------------------------------------TTCAC--------GGAGGTTCGTTAAAAAAAAAAATTT-----------------------------------------------------------------------------TTTTTTTTAATTTTTAT--------------------------------------------------------------------------------------------------------------------------------TTT------CTTT------------------------------------------TTTTTC-------ATCAAAAAGTGCAAAAATTCAAA--AAAAAAAAA------------------------AAAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAA-AAAAA----------AAAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................A--AAAAAAAAA------------------------AAAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAA-AA...........................................................................................................................................................................................................23201.803636000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................A--AAAAAAAAA------------------------AAAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAA-AAAAA----------AA............................................................................................................................................................................................28200.4599000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................AA--AAAAAAAAA------------------------AAAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAA-AAAAA----------..............................................................................................................................................................................................27200.4088000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................AA------------------------AAAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAA-AAAAA----------A.............................................................................................................................................................................................19200.1530300000
....................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAAA--AAAAAAAAA------------------------AAAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAA-A............................................................................................................................................................................................................2780.1311000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAA------------------------AAAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAA-AAAAA----------AAA...........................................................................................................................................................................................26200.1020100001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................A--AAAAAAAAA------------------------AAAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAA-AAAA.........................................................................................................................................................................................................25200.1020200000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAA------------------------AAAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAA-AAAAA----------A.............................................................................................................................................................................................25200.0510000100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAA------------------------AAAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAA-AAAAA----------AA............................................................................................................................................................................................22200.0510000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA------------------------AAAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAA-AAAAA----------AAA...........................................................................................................................................................................................22200.0510000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAA------------------------AAAAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAA-AAAAA----------AAA...........................................................................................................................................................................................25200.0510000001

Generated: 05/18/2015 at 02:01 AM