ID:

dmo_2138

 Coordinate:

scaffold_6540:30860615-30860765 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-34.1 -33.9 -33.9

Flybase annnotation

exon [dmoj_GLEANR_10579:12]; CDS [Dmoj\GI10671-cds]; intron [Dmoj\GI10671-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GCTAACGAATCCAATGGCCAGGTGGAGGATAGTCCTCCCGTCATACGCAAGTATGTGTTTGCAAGCCCAAAAAGAATAGATATATATGTGTATAGCATATATATAATGGATTAGGCACTTGTAGACATGGTGCAGGTCAAGAGAGAATTGTATAGGAGAGAAAGGCGAGTGAGAAAGCCTTTTTAAAGAGTGTGAGAATGTGAATTGAAAATCTTGTTTGTATATATGAGCTAGGCTATTTATTATAATTA
**************************************************...((((((((((((.((...((......((((((((((.....))))))))))......)).))..))))))))))))((((((.((......)).)))))).....((((((((..........)))))))).................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 V041
embryo
......................................................................................................................................................TATAGGAGAGAAAGGCGAGA................................................................................. 20 1 1 2.00 2 2 0 0
.......................................................................................................................TGTAGACATGGTGCAGGTCAGGAGAGA......................................................................................................... 27 1 1 1.00 1 0 1 0
.........................................................................................................ATGGATTAGGCACTTGTAGA.............................................................................................................................. 20 0 1 1.00 1 1 0 0
.CTAACGAATCCAATGGCCA....................................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0
.................................................................................................................................................................AAGGCGAGGGCGAAAGCCGT...................................................................... 20 3 19 0.32 6 6 0 0
...........................................................TACCAGCCCAAAAAGATTAG............................................................................................................................................................................ 20 3 6 0.17 1 1 0 0
..........................................................................................................................................................................................................AATGGACAATCTTGTTTG............................... 18 2 10 0.10 1 0 0 1

Anti-sense strand reads

CGATTGCTTAGGTTACCGGTCCACCTCCTATCAGGAGGGCAGTATGCGTTCATACACAAACGTTCGGGTTTTTCTTATCTATATATACACATATCGTATATATATTACCTAATCCGTGAACATCTGTACCACGTCCAGTTCTCTCTTAACATATCCTCTCTTTCCGCTCACTCTTTCGGAAAAATTTCTCACACTCTTACACTTAACTTTTAGAACAAACATATATACTCGATCCGATAAATAATATTAAT
**************************************************...((((((((((((.((...((......((((((((((.....))))))))))......)).))..))))))))))))((((((.((......)).)))))).....((((((((..........)))))))).................************************************************** 		Read size # Mismatch Hit Count Total Norm Total V056
head
 M046
female body
 V049
head
...........................................................AAGTTGGGGTTTTTCTTATC............................................................................................................................................................................ 20 2 2 0.50 1 1 0 0
...............................................................TGGGGTTTTTCTTATCTAC......................................................................................................................................................................... 19 2 8 0.13 1 0 0 1
.......................................................ACAACCGTTCGGGTATTTCC................................................................................................................................................................................ 20 3 14 0.07 1 0 1 0
...................................................ATACGCAACCCTTCGGGTT..................................................................................................................................................................................... 19 3 17 0.06 1 0 1 0
.................GGTCCAGCGCCCATCAGG........................................................................................................................................................................................................................ 18 3 17 0.06 1 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6540:30860565-30860815 + dmo_2138 GCTAACGAATCCAATGGCCAGGTGGAGGATAGTCCTCCCGTCATACGCAAGTATGTG--TTT-GCAAGCCC-AA-AAAGAA---TAGAT------------------------------------------------------------------------------ATATAT-----------GTGTAT-------------------------------------------AGC-ATATATATAATGG--ATTAGGCACTTGTAG-------------ACATGGTGCAGG---------------------------------------------------------------------------------------------TCAAGAGAGAATTGTATAGGAGA-----------------------------------------------------------------------------GAAAGG-CGAGTGAGAAAGC----------------------CTTTTTAAAGAGTGTGAGAATGTGAA---------------------------------------------------------------------------------------------------------------------TTGAAA-------ATCTTGTTTGTATATATGAGCTA----------------------------------------------------GGCTATTTATTATAATTA----------------------------------------------------------------
droVir3 scaffold_13047:10914567-10914894 - dvi_16401 GCCAGCGAATCCAACGGTCAGGTGGAGGATAGTCCACCTGTCATACGCAAGTATGTT--ACC-AAC---CC-AA-AAG-TCGCACAAATT--------------------------------------------------------------------------------------------------------------------------------GAACA-GAATTTTAG----------TATAGGGATATTAGGCCCTTGCAGCATATCGGTGTAAATACGGTGCTGG---------------------------------------------------------------------------------------------TAAACAG-------------------------------------------------CAATTTTTTTTTTTTTTAAGATATATACAAATATTTATAAGTATGTAAGGTCACTTCAGCAAGCCCGGTAATCGTTCCACTAGAGTCTCTTTAA----------------------------ATAAGTAGGATAT-----CTC----CGATCTA---------------------------------------------TTGATAACCAAAGCTA-------------GTTCAGT-------ATCTCGTTTGTACATATTAGCTA--------------------------------------------------------AATTAGTATAGTTA----------------------------------------------------------------
droGri2 scaffold_14624:735203-735258 - GCCAGCGAATCCAACGGACAGGTGGATGATAGTCCACCAGTTATACGCAAGTATGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004902:3141708-3141795 - GCCAATGAATCCAATGGTCAGGTGGAAGATAGTCCACCTGTTATACGCAAGTACGTA--CAC-AGATTAAC-TA-TATC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTGTA--TATATA---------------------------------------T
dp5 2:14094375-14094634 - GCCAGCGAATCCAATGGCCAGGTGGAAGACAGTCCCCCTGTTATACGCAAGTATGTT--GAGTAGTTTCTG---------------------------------------------------GAAAAACATTGGGGAAACATAACATTTTACAGAAAATGACGAGGGTGAGGT-----------GTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATGA--------------AATC--------------------------------------CTCAATTAATGGGGATTCCAATATAA-----A---TATTTGGG---------------------------------------TGATAA-GATAAGGGTTTTACGAATTATATTTGACTCG------------GGGGAGAC--AACAATTG--------------TA--TATACAGATATCTTGTGACGTGGTTTATTAGATT-----------T
droPer2 scaffold_0:6347503-6347725 + GCCAGCGAATCCAATGGCCAGGTGGAAGACAGTCCCCCTGTTATACGCAAGTATGTT--GAGTAGTTTCTG---------------------------------------------------GAAAAACATTGGGGAAACATAACATTCTATAGGAAATGACGAGGGTGAGGT-----------GTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACGA--------------AATC--------------------------------------CTCAATTAATGGGGATTCCAATATAA-----A---TATTTGGG---------------------------------------TGATAA-GATAAGGGTTAAACGAATTATATTTGACTCG------------GGGGAGAC--AACAATTG----------------------------------------------------------------
droAna3 scaffold_13340:22416172-22416377 + GCCAACGAATCCAACGGCCAGGTGGAAGATAGTCCTCCAGTTATACGCAAGTATGTT--AGA-ATATTTTA-AA-----TTGTAC--------------------------TTTCATTTTTGGTAAACTATATAGGATCTATAATATTTTATAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTAAA------------------TGCGGTTATTAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATGAATATTT--------------------------------------------------TTC---GAAAGAT-------------------TTG--------T-----T-------AATTT------------------TTTAAAAAGG--------------------------------------------ATAAATAGAAAAACTGTATT-----AGC----------------------------------------------------
droBip1 scf7180000396721:739118-739332 - GCCAACGAATCCAACGGCCAGGTGGAAGATAGTCCTCCAGTTATACGCAAGTATGTG--GTA-AACT-TTA-AA-ACCCTTATA--------------------------------------------------GGAACTAT---------------------------------TTTATTT-------------------------------------------------------------------------------------------------------------------------------ATTGAGAATTTATTTTTTAAATATCAAAA------------------TAAGGTTGTTAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAACGAATATTT--------------------------------------------------TTC----------------AAAAA-----TAATTG--------T-----T-------AATTT----------------------------------------------------------GTTTAAA-----AGATAAATATCAAAAGTGAACTATAATTTTGGTA--TAA----------------------------------------ATT
droKik1 scf7180000302475:522798-523078 - GCCAACGAGTCCAACGGTCAGGTGGAGGATAGTCCGCCAGTTATACGCAAGTATGTT--ATA-AGATATCC-AA-AAGCAAGAACGAGTCG---GGGTTTTAGCTAA----T--------------------------------------------------------------------------------------TTAA-TAAGG-TTCGGT------------------------------------------------GTAG-------------GCATAATATAGGGATATTGTTTTT-----ATATGGATATTATGTTTTAAAAATTAAAAAAGGTAATATTTAAAGAAAGCGAAAAATAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTTAAAGTTTATAAA-----------------------------------------------------ATGTT-------------------------------------------------TTTTGTAAATATGCG---TTTAAAGACG--------------------------------------------TTAAAAAGAGAGATTA---------TTTGATAACTAA----------------------------------------ATT
droFic1 scf7180000453912:1245379-1245637 - GCCAACGAGTCCAACGGCCAGGTGGAGGATAGTCCACCAGTTATCCGCAAGTATGTG--GTT-GTAGTCTT-TAAGAATAG---TAGGTTTCTTTAGCCTAAAAC----CC---------------------------------------------------TTTGCCAAAAG-----------C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAATTTTTTTAGAAACCTTAGGAAGATTGTGTCAAAGATATTTAATTTTTGAAGAACATGTTTAAAAACATAAATTATTTT------------------------------------------------------------------------------------AAAGTACTGATTTGAAAATTGGTAAAACTGATTTCAAATTTGTAAA-----------------------------------------------------ATGGG---------------------------------------------------------------------------------------------------------------------------GATTATAATATCCG----------------------------------------------------------------
droEle1 scf7180000491008:384392-384634 - GCCAACGAGTCCAATGGCCAGGTGGAGGATAGTCCACCAGTTATCCGCAAGTATGTG--AAA-ATTTTATTCAA-AAACAA---AAGGTTACATGGACCTAAGATAC----T---------------------------------------------------T--------------------TCTTTTCTGAGATGGTAA-TAGGG-ATGGGT--------------------------------------------------------------------------------------------------------------------------------------------------ATATTATTAT------------------------------------------------------------------------------ATTTTTTCTAAAGA---------------------------------------------------------------------------ATGTAAAACT-TGCAAAGT----AAATATTTAAAATAT--------------------------------------------------TTT---CAATTAAGCTGATAAAAGAAGTTT-------------TTTCATT------------------ATATAT----------------------------------------CATTCTGATAAATTA-------------------------------------------------------------------------------------
droRho1 scf7180000779477:158856-159076 - GCCAACGAGTCCAATGGCCAGGTGGAGGATAGCCCACCAGTTATACGCAAGTATGTC--AAT-ATTTCGTC-TAAAAACAA---TAGATTAT-----TCGAA-----ATAC---------------------------------------------------TTGGGCAAAATATTTTGTTTGTTTTTTTTTTAGATTTTAA-AAGGG-GTATAT--------------------------------------------------------------------------------------------------------------------------------------------------TTATTATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTGAAAATAT--------------------------------------------------TTC---GAAAGGTTTTGATAAAAATAATTT-------------TTTTAAT------------------ACATAT----------------------------------------GATTCTTATAAACAA------------------------------------------------------------------------------------T
droBia1 scf7180000302136:433270-433542 - GCCAACGAGTCCAACGGCCAGGTGGAGGATAGTCCGCCAGTTATTCGCAAGTATGTG--ATT-ATAATGTC-TG-AATC------------------------------AC---------------------------------------------------TAAGGAAAAGA-----------ATATCTTTGAGATT-AAAAAGG-GACTATGTACTGTACA-TATATTTAT----------TAAAGGG------------------------------------------------------ATG---------------------------------------------------------------------------------------------------------------------------CCCGAGAATGCCAATAGTTTTTATTATA---TTAAATACTAAT--------------------------------------------------------------------------------------------------------------------GACATTCTCAGGAATATAAAAACAGTAAT------------------GATTTTGATAGTAAAACCTT-------------TTTTAAT-------ATTCT----------------------------------------------------------GATTAAATA-TTTGAGATCCATCAGATTAA----------------------------------------------------------------
droTak1 scf7180000415769:2365939-2366216 + GCCAACGAGTCCAACGGCCAGGTGGAGGATAGTCCACCGGTTATCCGCAAGTATGTATGGTT-AAAAGGTT-AAAAGAGAA---TAGGTTAT-----------------AC---------------------------------------------------TAGGGGAAAAT-----------CTATATATCAGATTTTAA-TAGGG-TTCTTTAAAGTTAGC-------------------------------------------------------------------------------------------------------------------------------------------------TTA-----------------------------------------------------------------------------ATTTTTTTAATGGT---------------------------------------------------------------------------ATATAATATT-TATAAACC----AATAGTTCTAAATAA-TA-----AATC--------------------------------------CTATTTTAATGGATATTATAAAAAAAATTT-------------AGATAAT------------------ACATGT----------------------------------------TATTATAATTAAAGATATAGGAAACCAACAGATTAGCC----------------------------------------CTG-------------------
droEug1 scf7180000409798:308308-308527 + GCCAACGAGTCTAACGGTCAGGTGGAGGACAGTCCGCCAGTCATCCGCAAGTATGTA--ATC-ATATAGTC-CAAAAAT------------------------------AA---------------------------------------------------TGGGGCAAAAA-----------CTAATTTTGAGAGTTAAAATGG-GGTTTTGTAATGTTTTA----------TTGATCTTTAAATGGG------------------------------------------------------TTT---------------------------------------------------------------------------------------------------------------------------TC------------------------------------------------------------------------------------------------------------------------------------------------------------TGAACTA----------TT----------TTGGAACTT-------------------AAACA-----AAAT-T--------AATAGTGATATATCTTTTT----------------------------------------------------------GATTAAACA-ATAGAAAAGAAT----ATAA----------------------------------------------------------------
dm3 chr3R:20080538-20080765 - GCCAACGAGTCCAATGGCCAGGTGGAGGATAGTCCACCAGTTATACGCAAGTATGTG--ATT-ATGTGGTC-AA-AACCTAGTACAAGTTACAAGGCCAGAA-----ATAA---------------------------------------------------TTGGGTAATGT-----------TTTTAT-------------------------------------------TATGATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC------------------------------------------------------------------------------------------------------------------------------------------------------------CGT-----------ACATTGAAACAGTAATTGGGATGTTAC----------------AAAAA-----TAATAC--------A-----T-------TTTCT----------------------------------------------------------ATTTAAATA-TTAGGATATTATCAGATTTGGC----------------------------------------CTGTTAGGTTGTCCATTTAAAT
droSim2 3r:19612524-19612745 - dsi_14846 GCCAACGAGTCCAATGGCCAGGTGGAGGATAGTCCACCAGTTATACGCAAGTATGTG--ATT-ATATAGTC-AA-AACCTAGTACAAGTTATAAGGCCAGAA-----ATAA---------------------------------------------------TTGGGTAATGT-----------TTTAAT-------------------------------------------TATGATTTTTAAATGGG------------------------------------------------------TTTTA----------------------------------------------------G--------------------------------------------------------------------TC------------------------------------------------------------------------------------------------------------------------------------------------------------CGA-----------ATATTGATACAGTAATTGGGATGT-------------------AAAAA-----TAATAC--------AATAATA-------ATTCT----------------------------------------------------------GTTTAAATA-TTAGGAAATTATCAGATTTG----------------------------------------------------------------
droSec2 scaffold_0:20412890-20413132 - GCCAACGAATCCAATGGCCAGGTGGAGGATAGTCCACCAGTTATACGCAAGTATGTG--ATT-ATATAGTC-AA-AACCTAGTACAAGTTACAAGGCCACAA-----GTAA---------------------------------------------------TTGGGTAATGT-----------TTTTAT-------------------------------------------TATGATTTTTAAATGGG------------------------------------------------------TTTAA----------------------------------------------------G--------------------------------------------------------------------TC------------------------------------------------------------------------------------------------------------------------------------------------------------CGA-----------ATATTGATACAGTAATTGGTATGT-------------------AAAAA-----TAATAC--------AATAATA-------ATTCT----------------------------------------------------------GTTTAAATA-TTAGGAAATTATCAGATTTGGC----------------------------------------CTGTTAGGTTGTCCATTTA---
droYak3 3R:26426398-26426579 + GCCAACGAGTCCAACGGCCAGGTGGAGGATAGTCCACCAGTTATCCGCAAGTATGTG--ATT-ATATGGTC-AA-AACCTAATTGAAGTTACAAGGCCGGAA-----ATGA---------------------------------------------------GAGGGTGATGT-----------CTATAT----------------------------------------------------TAAATGGG------------------------------------------------------GTTTA----------------------------------------------------G--------------------------------------------------------------------TT------------------------------------------------------------------------------------------------------------------------------------------------------------CGA-----------A--------------------------------TGG-----GCAAAAAAG-----A---TATTTTGT---------------------------------------------------------------------------------------------------------TGGC----------------------------------------CAGTTAGGTTGTCCATTTA---
droEre2 scaffold_4820:7981849-7982036 + GCCAACGAGACCAACGGCCAGGTGGAGGACAGTCCACCAGTTATCCGCAAGTATGTG--ATT-ATATGGTC-AA-AACCTAATACAAGTTACAAGGCCAGAA-----ATAA---------------------------------------------------TTGGGTAATGT-----------CTATAT-------------------------------------------TGT-ATTCCTAAACGGG------------------------------------------------------ATCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGC----------------AAAAA-----TGATAA--------T-----T-------TGTCT----------------------------------------------------------GTTGAAATA-TTGGATAAGTATCAGATTTG----------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
GCTAACGAATCCAATGGCCAGGTGGAGGATAGTCCTCCCGTCATACGCAAGTATGTG--TTT-GCAAGCCC-AA-AAAGAA---TAGAT------------------------------------------------------------------------------ATATAT-----------GTGTAT-------------------------------------------AGC-ATATATATAATGG--ATTAGGCACTTGTAG-------------ACATGGTGCAGG---------------------------------------------------------------------------------------------TCAAGAGAGAATTGTATAGGAGA-----------------------------------------------------------------------------GAAAGG-CGAGTGAGAAAGC----------------------CTTTTTAAAGAGTGTGAGAATGTGAA---------------------------------------------------------------------------------------------------------------------TTGAAA-------ATCTTGTTTGTATATATGAGCTA----------------------------------------------------GGCTATTTATTATAATTA----------------------------------------------------------------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............................................................................................................................................................................................................................................................................................................................................................................................................TATAGGAGA-----------------------------------------------------------------------------GAAAGG-CGAGA.......................................................................................................................................................................................................................................................................................................................................................2012.002200000
......................................................................................................................................................................................................................................................ATGG--ATTAGGCACTTGTAG-------------A...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.CTAACGAATCCAATGGCCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
droVir3
GCCAGCGAATCCAACGGTCAGGTGGAGGATAGTCCACCTGTCATACGCAAGTATGTT--ACC-AAC---CC-AA-AAG-TCGCACAAATT--------------------------------------------------------------------------------------------------------------------------------GAACA-GAATTTTAG----------TATAGGGATATTAGGCCCTTGCAGCATATCGGTGTAAATACGGTGCTGG---------------------------------------------------------------------------------------------TAAACAG-------------------------------------------------CAATTTTTTTTTTTTTTAAGATATATACAAATATTTATAAGTATGTAAGGTCACTTCAGCAAGCCCGGTAATCGTTCCACTAGAGTCTCTTTAA----------------------------ATAAGTAGGATAT-----CTC----CGATCTA---------------------------------------------TTGATAACCAAAGCTA-------------GTTCAGT-------ATCTCGTTTGTACATATTAGCTA--------------------------------------------------------AATTAGTATAGTTA----------------------------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..CAGCGAATCCAACGGTCAGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000010000000000000000000000000000000000000000000000000000000
...............................GTCCACCTGTCATACGCAAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTAAGATATATACAAAT...............................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000010000000000000000000000000000000000000000
.......................GGAGGATAGTCCACCTGTCATACGCAATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001000100000000000000000000000000000000000000000000000000000000000
....GCGAATCCAACGGTCAGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAACCAAAGCTA-------------GTTCAGT-------.............................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
droGri2
GCCAGCGAATCCAACGGACAGGTGGATGATAGTCCACCAGTTATACGCAAGTATGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
GCCAATGAATCCAATGGTCAGGTGGAAGATAGTCCACCTGTTATACGCAAGTACGTA--CAC-AGATTAAC-TA-TATC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTGTA--TATATA---------------------------------------TSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......GAATCCAATGGTCAGGTGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.00200020
..CAATGAATCCAATGGTCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000
.....TGAATCCAATGGTCAGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100010
........................GAAGATAGTCCACCTGTTATACGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
..CAATGAATCCAATGGTCAGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
............................ATAGTCCACCTGTTATACGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010
................................TCCACCTGTTATACGCAAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
....ATGAATCCAATGGTCAGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
dp5
GCCAGCGAATCCAATGGCCAGGTGGAAGACAGTCCCCCTGTTATACGCAAGTATGTT--GAGTAGTTTCTG---------------------------------------------------GAAAAACATTGGGGAAACATAACATTTTACAGAAAATGACGAGGGTGAGGT-----------GTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATGA--------------AATC--------------------------------------CTCAATTAATGGGGATTCCAATATAA-----A---TATTTGGG---------------------------------------TGATAA-GATAAGGGTTTTACGAATTATATTTGACTCG------------GGGGAGAC--AACAATTG--------------TA--TATACAGATATCTTGTGACGTGGTTTATTAGATT-----------TSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........CAATGGCCAGGTGGAAGAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010000
..............................AGTCCCCCTGTTATACGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
...............GGCCAGGTGGAAGACAGTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
..CAGCGAATCCAATGGCCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
..CAGCGAATCCAATGGCCAGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010000000
...........................GACAGTCCCCCTGTTATACGCAATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
droPer2
GCCAGCGAATCCAATGGCCAGGTGGAAGACAGTCCCCCTGTTATACGCAAGTATGTT--GAGTAGTTTCTG---------------------------------------------------GAAAAACATTGGGGAAACATAACATTCTATAGGAAATGACGAGGGTGAGGT-----------GTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACGA--------------AATC--------------------------------------CTCAATTAATGGGGATTCCAATATAA-----A---TATTTGGG---------------------------------------TGATAA-GATAAGGGTTAAACGAATTATATTTGACTCG------------GGGGAGAC--AACAATTG----------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................................................................................................................................GTGAGGT-----------GTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACGA--------------AATC--------------------------------------......................................................................................................................................................................................................................2212.002000002
......................................................................................................................................................................GTGAGGT-----------GTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACGA--------------AAT.............................................................................................................................................................................................................................................................2111.001000001
droAna3
GCCAACGAATCCAACGGCCAGGTGGAAGATAGTCCTCCAGTTATACGCAAGTATGTT--AGA-ATATTTTA-AA-----TTGTAC--------------------------TTTCATTTTTGGTAAACTATATAGGATCTATAATATTTTATAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTTAAA------------------TGCGGTTATTAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATGAATATTT--------------------------------------------------TTC---GAAAGAT-------------------TTG--------T-----T-------AATTT------------------TTTAAAAAGG--------------------------------------------ATAAATAGAAAAACTGTATT-----AGC----------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................CCAGGTGGAAGATAGTCCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
.............ACGGCCAGGTGGAAGATAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
............AACGGCCAGGTGGAAGATAGTCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000001
..........................AGATAGTCCTCCAGTTATACGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
droBip1
GCCAACGAATCCAACGGCCAGGTGGAAGATAGTCCTCCAGTTATACGCAAGTATGTG--GTA-AACT-TTA-AA-ACCCTTATA--------------------------------------------------GGAACTAT---------------------------------TTTATTT-------------------------------------------------------------------------------------------------------------------------------ATTGAGAATTTATTTTTTAAATATCAAAA------------------TAAGGTTGTTAGT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAACGAATATTT--------------------------------------------------TTC----------------AAAAA-----TAATTG--------T-----T-------AATTT----------------------------------------------------------GTTTAAA-----AGATAAATATCAAAAGTGAACTATAATTTTGGTA--TAA----------------------------------------ATTSizeHit CountTotal NormTotal
No Reads
droKik1
GCCAACGAGTCCAACGGTCAGGTGGAGGATAGTCCGCCAGTTATACGCAAGTATGTT--ATA-AGATATCC-AA-AAGCAAGAACGAGTCG---GGGTTTTAGCTAA----T--------------------------------------------------------------------------------------TTAA-TAAGG-TTCGGT------------------------------------------------GTAG-------------GCATAATATAGGGATATTGTTTTT-----ATATGGATATTATGTTTTAAAAATTAAAAAAGGTAATATTTAAAGAAAGCGAAAAATAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATTTAAAGTTTATAAA-----------------------------------------------------ATGTT-------------------------------------------------TTTTGTAAATATGCG---TTTAAAGACG--------------------------------------------TTAAAAAGAGAGATTA---------TTTGATAACTAA----------------------------------------ATTSizeHit CountTotal NormTotal
No Reads
droFic1
GCCAACGAGTCCAACGGCCAGGTGGAGGATAGTCCACCAGTTATCCGCAAGTATGTG--GTT-GTAGTCTT-TAAGAATAG---TAGGTTTCTTTAGCCTAAAAC----CC---------------------------------------------------TTTGCCAAAAG-----------C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAATTTTTTTAGAAACCTTAGGAAGATTGTGTCAAAGATATTTAATTTTTGAAGAACATGTTTAAAAACATAAATTATTTT------------------------------------------------------------------------------------AAAGTACTGATTTGAAAATTGGTAAAACTGATTTCAAATTTGTAAA-----------------------------------------------------ATGGG---------------------------------------------------------------------------------------------------------------------------GATTATAATATCCG----------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
GCCAACGAGTCCAATGGCCAGGTGGAGGATAGTCCACCAGTTATCCGCAAGTATGTG--AAA-ATTTTATTCAA-AAACAA---AAGGTTACATGGACCTAAGATAC----T---------------------------------------------------T--------------------TCTTTTCTGAGATGGTAA-TAGGG-ATGGGT--------------------------------------------------------------------------------------------------------------------------------------------------ATATTATTAT------------------------------------------------------------------------------ATTTTTTCTAAAGA---------------------------------------------------------------------------ATGTAAAACT-TGCAAAGT----AAATATTTAAAATAT--------------------------------------------------TTT---CAATTAAGCTGATAAAAGAAGTTT-------------TTTCATT------------------ATATAT----------------------------------------CATTCTGATAAATTA-------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
GCCAACGAGTCCAATGGCCAGGTGGAGGATAGCCCACCAGTTATACGCAAGTATGTC--AAT-ATTTCGTC-TAAAAACAA---TAGATTAT-----TCGAA-----ATAC---------------------------------------------------TTGGGCAAAATATTTTGTTTGTTTTTTTTTTAGATTTTAA-AAGGG-GTATAT--------------------------------------------------------------------------------------------------------------------------------------------------TTATTATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTGAAAATAT--------------------------------------------------TTC---GAAAGGTTTTGATAAAAATAATTT-------------TTTTAAT------------------ACATAT----------------------------------------GATTCTTATAAACAA------------------------------------------------------------------------------------TSizeHit CountTotal NormTotal
No Reads
droBia1
GCCAACGAGTCCAACGGCCAGGTGGAGGATAGTCCGCCAGTTATTCGCAAGTATGTG--ATT-ATAATGTC-TG-AATC------------------------------AC---------------------------------------------------TAAGGAAAAGA-----------ATATCTTTGAGATT-AAAAAGG-GACTATGTACTGTACA-TATATTTAT----------TAAAGGG------------------------------------------------------ATG---------------------------------------------------------------------------------------------------------------------------CCCGAGAATGCCAATAGTTTTTATTATA---TTAAATACTAAT--------------------------------------------------------------------------------------------------------------------GACATTCTCAGGAATATAAAAACAGTAAT------------------GATTTTGATAGTAAAACCTT-------------TTTTAAT-------ATTCT----------------------------------------------------------GATTAAATA-TTTGAGATCCATCAGATTAA----------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
GCCAACGAGTCCAACGGCCAGGTGGAGGATAGTCCACCGGTTATCCGCAAGTATGTATGGTT-AAAAGGTT-AAAAGAGAA---TAGGTTAT-----------------AC---------------------------------------------------TAGGGGAAAAT-----------CTATATATCAGATTTTAA-TAGGG-TTCTTTAAAGTTAGC-------------------------------------------------------------------------------------------------------------------------------------------------TTA-----------------------------------------------------------------------------ATTTTTTTAATGGT---------------------------------------------------------------------------ATATAATATT-TATAAACC----AATAGTTCTAAATAA-TA-----AATC--------------------------------------CTATTTTAATGGATATTATAAAAAAAATTT-------------AGATAAT------------------ACATGT----------------------------------------TATTATAATTAAAGATATAGGAAACCAACAGATTAGCC----------------------------------------CTG-------------------SizeHit CountTotal NormTotal
No Reads
droEug1
GCCAACGAGTCTAACGGTCAGGTGGAGGACAGTCCGCCAGTCATCCGCAAGTATGTA--ATC-ATATAGTC-CAAAAAT------------------------------AA---------------------------------------------------TGGGGCAAAAA-----------CTAATTTTGAGAGTTAAAATGG-GGTTTTGTAATGTTTTA----------TTGATCTTTAAATGGG------------------------------------------------------TTT---------------------------------------------------------------------------------------------------------------------------TC------------------------------------------------------------------------------------------------------------------------------------------------------------TGAACTA----------TT----------TTGGAACTT-------------------AAACA-----AAAT-T--------AATAGTGATATATCTTTTT----------------------------------------------------------GATTAAACA-ATAGAAAAGAAT----ATAA----------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
GCCAACGAGTCCAATGGCCAGGTGGAGGATAGTCCACCAGTTATACGCAAGTATGTG--ATT-ATGTGGTC-AA-AACCTAGTACAAGTTACAAGGCCAGAA-----ATAA---------------------------------------------------TTGGGTAATGT-----------TTTTAT-------------------------------------------TATGATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TC------------------------------------------------------------------------------------------------------------------------------------------------------------CGT-----------ACATTGAAACAGTAATTGGGATGTTAC----------------AAAAA-----TAATAC--------A-----T-------TTTCT----------------------------------------------------------ATTTAAATA-TTAGGATATTATCAGATTTGGC----------------------------------------CTGTTAGGTTGTCCATTTAAATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............ATGGCCAGGTGGAGGATAGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................AAGGCCAGAA-----ATAA---------------------------------------------------TTGGGTA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............GGCCAGGTGGAGGATAGTCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.......AGTCCAATGGCCAGGTGGAGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............GGCCAGGTGGAGGATAGTC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000
.....CGAGTCCAATGGCCAGGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000
......................TGGAGGATAGTCCACCAGTTATACGCAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATCAGATTTGGC----------------------------------------CTGTTAGGTTGT..........2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............AATGGCCAGGTGGAGGATAGTCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
........GTCCAATGGCCAGGTGGAGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
......GAGTCCAATGGCCAGGTGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTATCAGATTTGGC----------------------------------------CTGT..................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.............ATGGCCAGGTGGAGGATAGTCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAATA-TTAGGATATTATCA......................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........CCAATGGCCAGGTGGAGGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................AGGATAGTCCACCAGTTATACGCAAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........TCCAATGGCCAGGTGGAGGAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGGGATGTTAC----------------AAAA...............................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
...........CAATGGCCAGGTGGAGGATAGTCCAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............AATGGCCAGGTGGAGGATAGTCCACC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAATTGGGATGTTAC----------------AAAAA-----.........................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............TGGCCAGGTGGAGGATAGTCCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGAAACAGTAATTGGGATG.......................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
GCCAACGAGTCCAATGGCCAGGTGGAGGATAGTCCACCAGTTATACGCAAGTATGTG--ATT-ATATAGTC-AA-AACCTAGTACAAGTTATAAGGCCAGAA-----ATAA---------------------------------------------------TTGGGTAATGT-----------TTTAAT-------------------------------------------TATGATTTTTAAATGGG------------------------------------------------------TTTTA----------------------------------------------------G--------------------------------------------------------------------TC------------------------------------------------------------------------------------------------------------------------------------------------------------CGA-----------ATATTGATACAGTAATTGGGATGT-------------------AAAAA-----TAATAC--------AATAATA-------ATTCT----------------------------------------------------------GTTTAAATA-TTAGGAAATTATCAGATTTG----------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................AA-AACCTAGTACAAGTTATAAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................C------------------------------------------------------------------------------------------------------------------------------------------------------------CGA-----------ATATTGATACAGTAATTGGGA.........................................................................................................................................................................................................................2511.00100000000100000000
droSec2
GCCAACGAATCCAATGGCCAGGTGGAGGATAGTCCACCAGTTATACGCAAGTATGTG--ATT-ATATAGTC-AA-AACCTAGTACAAGTTACAAGGCCACAA-----GTAA---------------------------------------------------TTGGGTAATGT-----------TTTTAT-------------------------------------------TATGATTTTTAAATGGG------------------------------------------------------TTTAA----------------------------------------------------G--------------------------------------------------------------------TC------------------------------------------------------------------------------------------------------------------------------------------------------------CGA-----------ATATTGATACAGTAATTGGTATGT-------------------AAAAA-----TAATAC--------AATAATA-------ATTCT----------------------------------------------------------GTTTAAATA-TTAGGAAATTATCAGATTTGGC----------------------------------------CTGTTAGGTTGTCCATTTA---SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........ATCCAATGGCCAGGTGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
..CAACGAATCCAATGGCCAGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
droYak3
GCCAACGAGTCCAACGGCCAGGTGGAGGATAGTCCACCAGTTATCCGCAAGTATGTG--ATT-ATATGGTC-AA-AACCTAATTGAAGTTACAAGGCCGGAA-----ATGA---------------------------------------------------GAGGGTGATGT-----------CTATAT----------------------------------------------------TAAATGGG------------------------------------------------------GTTTA----------------------------------------------------G--------------------------------------------------------------------TT------------------------------------------------------------------------------------------------------------------------------------------------------------CGA-----------A--------------------------------TGG-----GCAAAAAAG-----A---TATTTTGT---------------------------------------------------------------------------------------------------------TGGC----------------------------------------CAGTTAGGTTGTCCATTTA---SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..CAACGAGTCCAACGGCCAGGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
droEre2
GCCAACGAGACCAACGGCCAGGTGGAGGACAGTCCACCAGTTATCCGCAAGTATGTG--ATT-ATATGGTC-AA-AACCTAATACAAGTTACAAGGCCAGAA-----ATAA---------------------------------------------------TTGGGTAATGT-----------CTATAT-------------------------------------------TGT-ATTCCTAAACGGG------------------------------------------------------ATCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGC----------------AAAAA-----TGATAA--------T-----T-------TGTCT----------------------------------------------------------GTTGAAATA-TTGGATAAGTATCAGATTTG----------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......AGACCAACGGCCAGGTGGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001000
.........ACCAACGGCCAGGTGGAGGACAGTCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
..........................GGACAGTCCACCAGTTATCCGCAAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000

Generated: 05/18/2015 at 01:59 AM