ID:

dmo_2103

 Coordinate:

scaffold_6540:28813332-28813598 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-17.2 -16.7

Flybase annnotation

exon [dmoj_GLEANR_10466:2]; CDS [Dmoj\GI10549-cds]; exon [dmoj_GLEANR_10466:3]; CDS [Dmoj\GI10549-cds]; intron [Dmoj\GI10549-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GAAGACGCACACACATCTAACCAGCCAGCCAGCCACAGTCACAGCCACAGGTGAGCCGCTTGTGTGTTCGCCCTACAACTGAGCCGCTTTCTGTTATCACTGTGTGCATTGATCATTAACGCACTTCCCTAACGAAGCTTTTATTTAAATTTTGTACGCATGCAAACCAATCAACAACCAATCAACACCCCAACAACAACAACAACGATCAACAACCAACAACCAACTGAACTGAACTGAACGGTTAATCGAACTGTCTATCAATCAACCAACCCCATCTATGCAACGATCAATACATCTATGCTATGGACTATTAGTGGATCACTCAACCATGCCAGCGCCCCTTGTTCCCGGCACGCAGCAGCTA
************************************************************.(((.(((((.........)))))))).....(((..((.((((((((...............((((......))))...............))))))))))..)))....................................................................************************************************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body		 V041
embryo
 V056
head
............................................................TGTGTGTTCGCCCTACAACTG.............................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0
................................................................TGTTCGCCCTACAGCTGGGCCGCT....................................................................................................................................................................................................................................................................................... 24 2 1 1.00 1 1 0 0 0 0
..............................................................................CTGAGCCGCTTTCTGTTATCACTGTGTG..................................................................................................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0
...............................................................................TGAGCCGCTTTCTGTTATCACTGTGTGCA................................................................................................................................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................................................CAACAACCAACAACCAACTGAACTGA.................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
.......................................................................CCTACAACTGAGCCGCTTT..................................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0
.............................................................................ACTGAGCCGCTTTCTGTTATCACT.......................................................................................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0
...............................................................................TGAGCCGCTTTCTGTTATCACTGTGT...................................................................................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0
.............................................................................................................................................................................................................CGATCAACAACCAACAACCAACTGAAC....................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
......................................TCACAGCCACAGGTGATGAGCT................................................................................................................................................................................................................................................................................................................... 22 3 3 0.67 2 0 0 0 1 1
..............................................................................................................................................................................................CAACAACAACAACAACGATC............................................................................................................................................................. 20 0 10 0.10 1 1 0 0 0 0

Anti-sense strand reads

CTTCTGCGTGTGTGTAGATTGGTCGGTCGGTCGGTGTCAGTGTCGGTGTCCACTCGGCGAACACACAAGCGGGATGTTGACTCGGCGAAAGACAATAGTGACACACGTAACTAGTAATTGCGTGAAGGGATTGCTTCGAAAATAAATTTAAAACATGCGTACGTTTGGTTAGTTGTTGGTTAGTTGTGGGGTTGTTGTTGTTGTTGCTAGTTGTTGGTTGTTGGTTGACTTGACTTGACTTGCCAATTAGCTTGACAGATAGTTAGTTGGTTGGGGTAGATACGTTGCTAGTTATGTAGATACGATACCTGATAATCACCTAGTGAGTTGGTACGGTCGCGGGGAACAAGGGCCGTGCGTCGTCGAT
************************************************************************************************************************************.(((.(((((.........)))))))).....(((..((.((((((((...............((((......))))...............))))))))))..)))....................................................................************************************************************ 		Read size # Mismatch Hit Count Total Norm Total V056
head
 V049
head
 M046
female body
........TGTGGGTAGATTGGTCAGACGGT................................................................................................................................................................................................................................................................................................................................................ 23 3 1 1.00 1 0 1 0
.......GTGTGGGTAGATTGGTCTGACGGT................................................................................................................................................................................................................................................................................................................................................ 24 3 2 1.00 2 1 1 0
............................................................................................................................................................................TTGTTGGTTAGTTGTGGGGTTG............................................................................................................................................................................. 22 0 1 1.00 1 0 1 0
........TGTGGGTAGATTGGTCCGACGGT................................................................................................................................................................................................................................................................................................................................................ 23 3 1 1.00 1 1 0 0
..........TGGGTAGATTGGTCTGACGGT................................................................................................................................................................................................................................................................................................................................................ 21 3 4 0.75 3 2 1 0
..........TGTGTAGATTGGTGTGACGGT................................................................................................................................................................................................................................................................................................................................................ 21 3 8 0.63 5 3 2 0
.........GTGTGTAGATTGGTGTGACGGT................................................................................................................................................................................................................................................................................................................................................ 22 3 5 0.60 3 1 2 0
...................................................................................................................................................................................................................................................................................................................................................CGGGGAAAAAGGGCGGTG.......... 18 2 2 0.50 1 0 0 1
..........TGTGTAGATTGGTGAGACGGT................................................................................................................................................................................................................................................................................................................................................ 21 3 2 0.50 1 1 0 0
..........TGTGTAGATTGGTGCGACGGT................................................................................................................................................................................................................................................................................................................................................ 21 3 2 0.50 1 1 0 0
.......GTGTGTCTAGATTGGTCTGACGGT................................................................................................................................................................................................................................................................................................................................................ 24 3 2 0.50 1 1 0 0
............TGTAGATTGGTGGGACGGT................................................................................................................................................................................................................................................................................................................................................ 19 2 2 0.50 1 1 0 0
..........TGCGTAGATTGGTGGGACGGT................................................................................................................................................................................................................................................................................................................................................ 21 3 2 0.50 1 1 0 0
...........GTGTAGATTGGTGTGACGGT................................................................................................................................................................................................................................................................................................................................................ 20 3 14 0.43 6 3 3 0
........TGTGTGTAGATTGGTGTGACGGT................................................................................................................................................................................................................................................................................................................................................ 23 3 3 0.33 1 1 0 0
..........TGTGTCGATTGGTCGGACGG................................................................................................................................................................................................................................................................................................................................................. 20 2 3 0.33 1 1 0 0
.........GTGGGTAGATTGGTCTGACGGT................................................................................................................................................................................................................................................................................................................................................ 22 3 3 0.33 1 0 1 0
..........TGGCTAGATTGGTCTGTCGGT................................................................................................................................................................................................................................................................................................................................................ 21 3 3 0.33 1 0 1 0
...........GTGTAGATTGGTTTGTCGGT................................................................................................................................................................................................................................................................................................................................................ 20 2 3 0.33 1 0 1 0
.......GTGTGTGTAGATTGGTGTGACGGT................................................................................................................................................................................................................................................................................................................................................ 24 3 3 0.33 1 0 1 0
.......GTGTTTGTAGATTGGTGGGACGGT................................................................................................................................................................................................................................................................................................................................................ 24 3 4 0.25 1 1 0 0
.........GTGGGTAGATTGGTCCGACGGT................................................................................................................................................................................................................................................................................................................................................ 22 3 4 0.25 1 1 0 0
..........TGGGTAGATTGGTCGGGCGG................................................................................................................................................................................................................................................................................................................................................. 20 2 4 0.25 1 1 0 0
.............................................................................................................................................................................................................................................................................................TGCTAGTTCTGTAGATGAGA.............................................................. 20 3 4 0.25 1 1 0 0
..........TGTGTAGATTGTTGGGACGGT................................................................................................................................................................................................................................................................................................................................................ 21 3 4 0.25 1 0 1 0
.....................GTCGGTCGGGCGGTGTCACGGT.................................................................................................................................................................................................................................................................................................................................... 22 3 5 0.20 1 1 0 0
..........TGGGTAGATTGGTCAGACGGT................................................................................................................................................................................................................................................................................................................................................ 21 3 6 0.17 1 1 0 0
..........TGTGTAAATTGGTGGGACGGT................................................................................................................................................................................................................................................................................................................................................ 21 3 6 0.17 1 0 1 0
..........TGGGTAGATTGGTCCGACGGT................................................................................................................................................................................................................................................................................................................................................ 21 3 6 0.17 1 0 1 0
...........GGGTAGATTGGTCTGACGGT................................................................................................................................................................................................................................................................................................................................................ 20 3 8 0.13 1 1 0 0
...........GGGTAGATTGGCCTGTCGGT................................................................................................................................................................................................................................................................................................................................................ 20 3 8 0.13 1 0 1 0
..................................................................................................................TAGTTGGGCGAAGGGATTG.......................................................................................................................................................................................................................................... 19 3 11 0.09 1 0 0 1
...........GAGTAGATTGGTCTGACGGT................................................................................................................................................................................................................................................................................................................................................ 20 3 11 0.09 1 1 0 0
...........GTGTAGATTCGTCTGACGGT................................................................................................................................................................................................................................................................................................................................................ 20 3 15 0.07 1 1 0 0
.............................................................................................................................AGGGGTCGCATCGAAAATA............................................................................................................................................................................................................................... 19 3 20 0.05 1 0 0 1
............TGTAGATTGGGGTGTCGGT................................................................................................................................................................................................................................................................................................................................................ 19 3 20 0.05 1 0 1 0
.............................GTCGGCGTCAGTGTGGGTGTTC............................................................................................................................................................................................................................................................................................................................ 22 3 20 0.05 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6540:28813282-28813648 + dmo_2103 GAAGACGCACACACATCTAA---CCAGC-------------CAGC---------------------------------------------------------------CAGCCACAGTCACAGCCACAGGTGAGCCGCTTGTGTGTTCGCCCTACAACTGAGCCGCTTTCTGTT-AT-CACTGTGTG---CATTGATC-ATTAACGCACTTCCCTAACGAAGCTTTTATTTAAATTTT--GTACGCATGCAAACCAATCAAC-----AACC---AA----------------------------------TCAACACC-CCAACAACAAC---------AACAACGATCAACAAC------C-AACAACCAACTGAACTGAACTGAACGGTTAATCGAACTGTCTATCAATCAACCAACCCCATCTATGCAACGATCAAT-------------ACATCTATGCT---------ATG----------GACTATTAGTGGATCACTCAACCATGCCAGCGCCCCTTGTTCCCGGCACGCAGCAGCTA
droVir3 scaffold_13047:13040206-13040554 - dvi_16732 GAAGACGCACACACATCTCG---CCAGC-------------CAGC---------------------------------------------------------------CAGCCACAGTCACAGCCACAGGTGAGCCGCTTGTGTGTTCGCCCTACAACTGAGCCGCTTTCTGTT-AT-CACTGTGTG---CATTGATC-ATTAACGCACTTCCCTAACGAAGCTTTTATTTAAATTTT--GTACGCATGCCAACCAATCAAC-----AACC---A------------------------------------CAACACCCCCAACAACAAC---------AACAACGATCAACAAC--------------C-----AACTGAACTGTACGGTTAACCGAACTATCTATCTATCAACCAATACCATCCATGCAACAATCAAT-------------ACAC--ATGC------------G----------GACTTTTAGTGGATCACTCAACCATGCCAGCGCCCCTCGCACCCGGCACGCAGCAGCTG
droGri2 scaffold_15074:4073592-4073925 - GAAGACGCACACACATCTAG---C-----------------CAGCAGCCAGCAGCAGCAGCAGCAGAAC------------------------------CCAA---CG-----ACAGTCACAGCCACAGGTGAGCCGCTTGTGTGTTCGCCCTACAACTGAGCCGCTTTCTGTT-AT-CACTGTGTG---CATTGATC-ATTAACGCACTTCCCTAACGAAGCTTTTATTTAAATTTT--GTACGCATGCCAACCA-------------AC---CAATCA-----A---------------C------AACC------------AACAAC---------AACAACGATCAACAA------------------------------------------------TCTATCTAT-----------------GCAA-----AATCACCCCCCCAAAA----------AATGTTCAAAATGTTCAAAACAC--ACAACAGTGGATCACTCAACCATGCCAGCGCCCCTTGCACCGGGCACACATCAGCTG
droWil2 scf2_1100000004921:2765229-2765435 + CAAGACGCACACGCATCTGCATGC--C-A--GTTCGGCA-TCCG---G-------TTCCGGAGCCCAAC------------------------------CGGG---CGCCGGAGTTGGCCCAATTACAGGTGAGATGCTTGTGTGTTCGCCCTACAACTAAGCCGCTTTATGTT-CTACACTGTGTGACCAATTGATC-ATTAACACTCTTCCCTAACGAAGCTTTTATTTAAATTTT-CGCATGCATGCAACTC----AAC-----C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5 2:15316272-15316602 - dps_570 GAAGACGCACACGCATCTGG---CCTCC-------------CAGCAGCA----GCAGCAACAGCAGCAG------------------------------CCA-----GGAGGCACAGTCACAGCCACAGGTGAGCCGCTTGTGTGTTCGCCCTACAACTGAGCCGCTTTCTGTT-AT-CACTGTGTG---CATTGACC-ATTAACGCTCTTCCCTAACGAAGCTTTTATTTAAATTTT--GTACGCATGCAAACA--CCGATTCGTTA--C---GATCCGACCCGACCACCAAACCACCAACCGA-----TCAACCCT-CCTCCAAC---------ATCAAC--CGA-------ACCAATCCGCAC---------------------------ATCGAA------------------------------------------------------------------------------------------TTGCAGTGGATCACTCG---ATGCCAGTGCCCCTCGCGCCGGGAACGCAGCAACTG
droPer2 scaffold_0:5097922-5098247 + GAAGACGCACACGCATCTGG---CCTCC-------------CAGCAGCA----GCAGCAACAGCAGCAG------------------------------CCA-----GGAGGCACAGTCACAGCCACAGGTGAGCCGCTTGTGTGTTCGCCCTACAACTGAGCCGCTTTCTGTT-AT-CACTGTGTG---CATTGACC-ATTAACGCTCTTCCCTAACGAAGCTTTTATTTAAATTTT--GTACGCATGCAAACA--CCGATTCGTTA--C---GATCCG-----ACCACCAAACCGCCAACCGA-----TCAACCCT-CCTCCAAC---------ATCAAC--CGA-------ACCAATCCGCAC---------------------------ATCGAA------------------------------------------------------------------------------------------TTGCAGTGGATCACTCG---ATGCCAGTGCCCCTCGCGCCGGGAACGCAGCAACTG
droAna3 scaffold_12911:2900439-2900743 + CAAGACGCATACGCACCAGCTCGC--C-CACGGCGGG---GCTG---GC----GCCGGTGGAGGAGGTG------------------------------GTGG---TGGAGGCGCCGTAACAGCCACAGGTGAGCCGCTTGTGTGTTCGCCCTACCAATGAGCCGCTTTCTGTTTATCCACTGTGTG---TATTGATT-ATTAACGCTCTTCCCTAACGAAGCTTTTATTTAAATCTT--GTACGCATGCCACTCCCT-------------------CCA-----T------------CATCTGATCGAAT-----CT-ACACCAAC---TCTA-------C------------ACCAATCC--------------------------------CCGAA-----------------------------------------------------------------------------------------TCTGCAGTGGATCACTCA---ATGCCCGCTCCTCTGGCGCCCGGAACGCAACAACTG
droBip1 scf7180000396714:205306-205602 - CAAGACGCATACGCACCAGCTCGC--C-CACGGTGGG---GCTG---GC----GCCGGTGGAGGAGGTG------------------------------GTGG---TGGAGGCGCCGTAACAGCCACAGGTGAGCCGCTTGTGTGTTCGCCCTACCAATGAGCCGCTTTCTGTTTATCCACTGTGTG---TATTGATT-ATTAACGCTCTTCCCTAACGAAGCTTTTATTTAAATCTT--GTACGCATGCCACTCCTT-------------------CCA-----T---------------CTGATCGAAT-----CT-TCA---------CCAACTCC------------------AATCC--------------------------------TTGAA-----------------------------------------------------------------------------------------TCTGCAGTGGATCACTCA---ATGCCCGCTCCTCTGGCGCCCGGAACGCAACAACTG
droKik1 scf7180000302706:2324158-2324482 - GAAGACGCATACGCATCAGATAGC--C-------------GGCGGCGGT----GGCGGTGGAGCAGGAGCTGGAGGACCCGGAGGATCAGCAGGAAGCGGTGG---CGGAGGCCCCGTAACAGCCACAGGTGAGCCGCTTGTGTGTTCGCCATACCAATGAGCCGCTTTCTGTT-AT-CACTGTGTG---CATTGATT-ATTAACGCTCTTCCCTAACGAAGCTTTTATTTAAATCTTGTGTACGCATGCTAATT--CCGTC-----ATCCAATCATCCA-----------------------------AT--------------------CCAACACCAAT--TG-------------ACC-GACAACC----------------------------A-----------------------------------------------------------------------------------------CCTGCAGTGGATCACTCC---ATGCCCCCAACTCTGGCGCCCGGGACCCAGCAGCTG
droFic1 scf7180000453930:681663-681962 + CAAGACGCACACGCACCAGATCGC--G-------------CCAGGCGGC----GGCGGTGGAGCAGGAG------------------------------GCGG---CGGAGGAGCCGTCACAGCCACAGGTGAGCCGCTTGTGTGTTCGCCCTACCAATGAGCCGCTTTCTGTT-AT-CACTGTGTG---CATCGATTAATTAACGCTCTTCCCTAACGAAGCTTTTGTTTAAATCTT--GTACGCATGCCAACT--TCTAC-----AAAC---CGACCA-----A---------------CC-----TATCAACTTT-AA--------CTCCATCTCC------------------GTACC--------------------------------GCCAA-----------------------------------------------------------------------------------------TCTGCAGTGGATCACTCA---ATGCCCGCACCTCTGGCGCCCGGGACGCAGCAGCTG
droEle1 scf7180000491008:763616-763901 + CAAGACGCACACGCACCAGATCGC--G-------------CCTGGTGG-------CGGCGGAGCAGGAG------------------------------GCGG---CGGAGGCGCCGTCACAGCCACAGGTGAGCCGCTTGTGTGTTCGCCCTACCAATGAGCCGCTTTCTGTT-AT-CACTGTGTG---CATCGATT-ATTAACGCTCTTCCCTAACGAAGCTTTTATTTAAATCTT--GTACGCATGCCCACA--TCGAC-----AAAC---CATCCA-----A------------------------TCAA---------------CGCCAACTCC------------------GTACC--------------------------------GCCAA-----------------------------------------------------------------------------------------CCTGCAGTGGATCACTCA---ATGCCCGCTCCCCTGGCGCCCGGAACGCAGCAGCTG
droRho1 scf7180000768020:24350-24635 + CAAGACGCACTCGCACCAGATCGC--G-------------CCTGGTGG-------AGGCGGAGCAGGAG------------------------------GCGG---CGGAGGCGCCGTCACAGCCACAGGTGAGCCGCTTGTGTGTTCGCCCTACCAATGAGCCGCTTTCTGTT-AT-CACTGTGTG---CATTGATT-ATTAACGCTCTTCCCTAACGAAGCTTTTATTTAAATCTT--GTACGCATGCCAACA--TCGAC-----AAAC---CAACCA-----A------------------------TCAA---------------CTCTATCTCC------------------GTACC--------------------------------GCCAA-----------------------------------------------------------------------------------------CCTGCAGTGGATCACTCA---ATGCCCGCTCCTCTGGCGCCCGGGACGCAGCAGCTG
droBia1 scf7180000302402:8966370-8966603 - CAAGACGCACACGCACCAGATCGC--T-------------CCCGGGGGC----GGGGGTGGAGCAGGAG------------------------------GCGGCGGAGCAGGAGCCGTCACAGCCACAGGTGAGCCGCTTGTGTGTTCGCCCTACCAATGAGCCGCTTTCTGTT-AT-CACTGTGTG---CATTGATT-AATAACGCTCTTCCCTAACGAAGCTTTTATTTAAATCTT--GTACGCATGCCAATT--TCGAC-----AAAC---CGACCA-----A---------------C------AATCAA---------------------CCCC------------------TCA--------------------------------------------------------------------------------------------------------------------------------CCTGCA---------------------------------------------------
droTak1 scf7180000415653:146087-146370 + CAAGACGCACACGCACCAACTGGG----------GGC--GCCTGGTGGA-GCAGCAGGAGGAGCAGGAG------------------------------GCGGCGGTGGAGGAGCCGTCACAGCCACAGGTGAGCCGCTTGTGTGTTCGCCCTACCAATGAGCCGCTTTCTGTT-AT-CACTGTGTG---CATTGATT-ATTAACGCTCTTCCCTAACGAAGCTTTTATTTAAATCTT--GTACGCATGCCAATT--TCGTC-----AAAC---CA---------A---------------C------AATCAA---------------CTTTAACC--------------------------------------------------------------------------------------------------------------------------------------------------------CCGCAGTGGATCACTCA---ATGCCCGCACCTCTGGCGCCCGGAACGCAGCAGCTG
droEug1 scf7180000409804:2471471-2471765 - CAAGACGCACTCACACCAGATTGC--G-------------CCTGGAGGT----GGTGGTGGAACCGGAG------------------------------GCGG---CGGAGGCGCCGTCACAGCCACAGGTGAGCCGCTTGTGTGTTCGCCCTACCAATGAGCCGCTTTCTGTT-AT-CACTGTGTG---CATTGATT-ATTAACGCTCTTCCCTAACGAAGCTTTTATTTAAATCTT--GTACGCATGCCAACT--TCAAC-----AAAC---CATCCA-----A------------CAAC------AATCAA---------------CACCAACTCC------------------AAACC--------------------------------GCCCA-----------------------------------------------------------------------------------------TCTGCAGTGGATCACTCA---ATGCCCGCACCTCTGGCGCCAGGGACGCAGCAGCTG
dm3 chr3R:16151828-16152114 - CAAGACGCACACGCATCAGATAGC--G-------------CCTGGAGGC----GTCGGTGGAGCAGGAG------------------------------GCGG---CGGAGGCGCCGTCACAGCCACAGGTGAGCCGCTTGTGTGTTCGCCCTACCAATGAGCCGCTTTCTGTT-AT-CCATGTGTG---CATTGATT-ATTAACGCTCTTCCCTAACGAAGCTTTTATTTAAATCTT--GTACGCATGCTAACT--TCAAC-----AAAT---CATCCA-----A---------------C------AAT--------------------CCAACTCC------------------GTACC--------------------------------GTCAA-----------------------------------------------------------------------------------------TCTGCAGTGGATCACTCA---ATGCCCGCTCCTCTGGCGCCCGGGACGCAGCAGCTG
droSim2 3r:5152559-5152845 + dsi_18771 CAAGACGCACACGCATCAGATAGC--G-------------CCTGGAGGC----GCCGGTGGAGCAGGAG------------------------------GCGG---CGGAGGCGCCGTCACAGCCACAGGTGAGCCGCTTGTGTGTTCGCCCTACCAATGAGCCGCTTTCTGTT-AT-CCATGTGTG---CATTGATT-ATTAACGCTCTTCCCTAACGAAGCTTTTATTTAAATCTT--GTACGCATGCTTACT--TCAAC-----AAAC---CATCCA-----A---------------C------AAT--------------------CCAACTCC------------------GTACC--------------------------------GCCAA-----------------------------------------------------------------------------------------TCTGCAGTGGATCACTCA---ATGCCCGCTCCTCTGGCGCCCGGGACGCAGCAGCTG
droSec2 scaffold_27:585758-586044 + CAAGACGCACACGCATCAGATAGC--G-------------CCTGGAGGC----GCCGGTGGAGCAGGAG------------------------------GCGG---CGGAGGCGCCGTCACAGCCACAGGTGAGCCGCTTGTGTGTTCGCCCTACCAATGAGCCGCTTTCTGTT-AT-CCATGTGTG---CATTGATT-ATTAACGCTCTTCCCTAACGAAGCTTTTATTTAAATCTT--GTACGCATGCTTACT--TCAAC-----AAAC---CATCCA-----A---------------C------AAT--------------------CCAACTCC------------------GTACC--------------------------------GCCAA-----------------------------------------------------------------------------------------TCTGCAGTGGATCACTCA---ATGCCCGCTCCTCTGGCGCCCGGGACGCAGCAGCTG
droYak3 3R:4930101-4930326 - AAAGACGCACACGCATCAGATCGC--G-------------CCTGGAGGA----GCCGGTGGAGTAGGAG------------------------------GCGG---CGGAGGCGCCGTCACAGCCACAGGTGAGCCGCTTGTGTGTTCGCCCTACCAATAAGCCGCTTTCTGTT-AT-CACTGTGTA---CATTGATT-ATTAACGCTCTTCCCTAACGAAGCTTTTATTTAAATCTT--GTACGCATGCTAACT--TCGAC-----AAAC---CATCCA------------------------------------------------------ACTCC------------------GTACC--------------------------------GCCAA-----------------------------------------------------------------------------------------C--------------------------------------------------------
droEre2 scaffold_4770:5523231-5523517 + CAAGACGCACACGCATCAGATCGC--G-------------CCTGGAGGC----GCCGGTGGAGCAGGAG------------------------------GCGG---CGGAGGCGCCGTCACAGCCACAGGTGAGCCGCTTGTGTGTTCGCCCTACCAATGAGCCGCTTTCTGTT-AT-CACTGTGTG---CATTGATT-ATTAACGCTCTTCCCTAACGAAGCTTTTATTTAAATCTT--GTACGCATGCTAACT--TCGAC-----AAAC---CATCCA-----A---------------C------AAT--------------------CCAACTCC------------------GTACC--------------------------------GCCAA-----------------------------------------------------------------------------------------CCTGCAGTGGATCACTCA---ATGCCCGCTCCTCTGGCACCCGGGACTCAACAGCTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
GAAGACGCACACACATCTAA---CCAGC-------------CAGC---------------------------------------------------------------CAGCCACAGTCACAGCCACAGGTGAGCCGCTTGTGTGTTCGCCCTACAACTGAGCCGCTTTCTGTT-AT-CACTGTGTG---CATTGATC-ATTAACGCACTTCCCTAACGAAGCTTTTATTTAAATTTT--GTACGCATGCAAACCAATCAAC-----AACC---AA----------------------------------TCAACACC-CCAACAACAAC---------AACAACGATCAACAAC------C-AACAACCAACTGAACTGAACTGAACGGTTAATCGAACTGTCTATCAATCAACCAACCCCATCTATGCAACGATCAAT-------------ACATCTATGCT---------ATG----------GACTATTAGTGGATCACTCAACCATGCCAGCGCCCCTTGTTCCCGGCACGCAGCAGCTASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................................................................................................................................TGTGTGTTCGCCCTACAACTG.................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.............................................................................................................................................................CTGAGCCGCTTTCTGTT-AT-CACTGTGTG---...................................................................................................................................................................................................................................................................................................................................................................2811.001100000
..............................................................................................................................................................TGAGCCGCTTTCTGTT-AT-CACTGTGTG---CA.................................................................................................................................................................................................................................................................................................................................................................2911.001100000
............................................................................................................................................................................................................................................................................................................................................................CAACAAC------C-AACAACCAACTGAACTGA....................................................................................................................................................................2611.001100000
......................................................................................................................................................CCTACAACTGAGCCGCTTT........................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
............................................................................................................................................................ACTGAGCCGCTTTCTGTT-AT-CACT...........................................................................................................................................................................................................................................................................................................................................................................2411.001000010
..............................................................................................................................................................TGAGCCGCTTTCTGTT-AT-CACTGTGT.......................................................................................................................................................................................................................................................................................................................................................................2611.001000001
........................................................................................................................................................................................................................................................................................................................................................CGATCAACAAC------C-AACAACCAACTGAAC.......................................................................................................................................................................2711.001100000
................................................................................................................................................................................................................................................................................................................................CAACAACAAC---------AACAACGATC....................................................................................................................................................................................................20100.101100000
droVir3
GAAGACGCACACACATCTCG---CCAGC-------------CAGC---------------------------------------------------------------CAGCCACAGTCACAGCCACAGGTGAGCCGCTTGTGTGTTCGCCCTACAACTGAGCCGCTTTCTGTT-AT-CACTGTGTG---CATTGATC-ATTAACGCACTTCCCTAACGAAGCTTTTATTTAAATTTT--GTACGCATGCCAACCAATCAAC-----AACC---A------------------------------------CAACACCCCCAACAACAAC---------AACAACGATCAACAAC--------------C-----AACTGAACTGTACGGTTAACCGAACTATCTATCTATCAACCAATACCATCCATGCAACAATCAAT-------------ACAC--ATGC------------G----------GACTTTTAGTGGATCACTCAACCATGCCAGCGCCCCTCGCACCCGGCACGCAGCAGCTGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................................................................................................................................................CTACAACTGAGCCGCTTTCTG.....................................................................................................................................................................................................................................................................................................................................................................................2112.002001000000000000000000000100000000000000000000000000000000000000
.................................................................................................................................GTGAGCCGCTTGTGTGTTCGCCCTA.......................................................................................................................................................................................................................................................................................................................................................................................................2512.002000000000000000000000000010010000000000000000000000000000000000
......................................................................................................................................................................TTTCTGTT-AT-CACTGTGTG---CA.................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................CTTTCTGTT-AT-CACTGTGTG---C..................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000100000000000000000000000000000000000000
.................................................................................................................................GTGAGCCGCTTGTGTGTTCGCCCTACAAC...................................................................................................................................................................................................................................................................................................................................................................................................2911.001000000000000000000000000000000000001000000000000000000000000000
.................................................................................................................................GTGAGCCGCTTGTGTGTT..............................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000100000000000000000000000000000
....................................................................................................................................AGCCGCTTGTGTGTTCGCC..........................................................................................................................................................................................................................................................................................................................................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................ACAATCAAT-------------ACAC--ATGC------------G----------GAC........................................................2111.001000000000000000000000000000000100000000000000000000000000000000
....................................................................................................................................................................................................TC-ATTAACGCACTTCCCTAAC.......................................................................................................................................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTCAACCATGCCAGCGCCC........................2111.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................CTATCTATCAACCAATACCAT.........................................................................................................................2111.001000000000000000000010000000000000000000000000000000000000000000
...GACGCACACACATCTCG---CCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................GTGTTCGCCCTACAACTGAGC..............................................................................................................................................................................................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAC--ATGC------------G----------GACTTTTAGTGG...............................................2111.001000010000000000000000000000000000000000000000000000000000000000
..........ACACATCTCG---CCAGC-------------CAGC---------------------------------------------------------------C....................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000001000000000000000000000000
.................................................................................................................................GTGAGCCGCTTGTGTGTTCGC...........................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000010000000000000000000000000000000000000000000000000000000
.......CACACACATCTCG---CCAGC-------------CAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000001000000000000000000000000000000000000
...........................................................................................................................................TGTGTGTTCGCCCTACAACTGAGCCGC...........................................................................................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................................................................................................................................................................ACAACGATCAACAAC--------------C-----AACTGAACT.................................................................................................................................................................2511.001010000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................ACTGAGCCGCTTTCTGTT-AT-CACTG..........................................................................................................................................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................TATTTAAATTTT--GTACGCATGCCA.....................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000001000000000000000000000000000000
...................................................................................................................................................CGCCCTACAACTGAGCCGC...........................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
...............................................................................................................................................................................................ATTGATC-ATTAACGCACTTCC............................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000001000000000000000000000000
...............................................................................................................................................TGTTCGCCCTACAACTGAGCC.............................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCACCCGGCACGCAGCAGC..2111.001000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAAT-------------ACAC--ATGC------------G----------GACTTTTAGT.................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTAGTGGATCACTCAACCATG.................................2311.001001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................CGCTTTCTGTT-AT-CACTGTGT.......................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCACTCAACCATGCCAGCG...........................2111.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCTCGCACCCGGCACGCAG......2111.001000000000000000000000000010000000000000000000000000000000000000
................CTCG---CCAGC-------------CAGC---------------------------------------------------------------CAGCCACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................TGAGCCGCTTGTGTGTTCGCC..........................................................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................ACAGCCACAGGTGAGCCGCTT.....................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000100000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................TTAACGCACTTCCCTAACGA.....................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000010000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTCAACCATGCCAGCGCCCCTCGC...................2611.001000000000000000000000000000010000000000000000000000000000000000
..........................................................................................................................................................................................................AACGCACTTCCCTAACGAAGC..................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000001000000000000000000000000000000000000
.............CATCTCG---CCAGC-------------CAGC---------------------------------------------------------------CAGCCACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................AAT-------------ACAC--ATGC------------G----------GACTTTTAG..................................................2111.001000000000000000000000010000000000000000000000000000000000000000
...........................................................................................................................................TGTGTGTTCGCCCTACAAC...................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCTCGCACCCGGCAC..........1711.001000000000000000000000000000000000000000000000000000100000000000
...............................................................................................................................................................................................................................................................................................................................................................CAAC--------------C-----AACTGAACTGTACGGT..........................................................................................................................................................2111.001100000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAC--ATGC------------G----------GACTTTTAGTGGA..............................................2111.001000000000000000000000000000000100000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................AACAATCAAT-------------ACAC--ATGC------------G----------G..........................................................2011.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................AACTGAGCCGCTTTCTGTT-AT-...............................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000001000000000000000000000000000000000000
...............................................................................................................CCACAGTCACAGCCACAG................................................................................................................................................................................................................................................................................................................................................................................................................................18110.091000000000000000000000000000000000000000000000000000010000000000
droGri2
GAAGACGCACACACATCTAG---C-----------------CAGCAGCCAGCAGCAGCAGCAGCAGAAC------------------------------CCAA---CG-----ACAGTCACAGCCACAGGTGAGCCGCTTGTGTGTTCGCCCTACAACTGAGCCGCTTTCTGTT-AT-CACTGTGTG---CATTGATC-ATTAACGCACTTCCCTAACGAAGCTTTTATTTAAATTTT--GTACGCATGCCAACCA-------------AC---CAATCA-----A---------------C------AACC------------AACAAC---------AACAACGATCAACAA------------------------------------------------TCTATCTAT-----------------GCAA-----AATCACCCCCCCAAAA----------AATGTTCAAAATGTTCAAAACAC--ACAACAGTGGATCACTCAACCATGCCAGCGCCCCTTGCACCGGGCACACATCAGCTGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
......................................................................................................................................CCGCTTGTGTGTTCGCCCT........................................................................................................................................................................................................................................................................................................................................................................................................1911.00110
.................................................................GAAC------------------------------CCAA---CG-----ACAGTCAC........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110
..........................................................................................................................................................................................................................................TTTT--GTACGCATGCCAACCA-------------AC---CAAT...........................................................................................................................................................................................................................................................................2611.00110
...................G---C-----------------CAGCAGCCAGCAGCAGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2340.25110
droWil2
CAAGACGCACACGCATCTGCATGC--C-A--GTTCGGCA-TCCG---G-------TTCCGGAGCCCAAC------------------------------CGGG---CGCCGGAGTTGGCCCAATTACAGGTGAGATGCTTGTGTGTTCGCCCTACAACTAAGCCGCTTTATGTT-CTACACTGTGTGACCAATTGATC-ATTAACACTCTTCCCTAACGAAGCTTTTATTTAAATTTT-CGCATGCATGCAACTC----AAC-----C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................ATGC--C-A--GTTCGGCA-TCCG---G-------TTCCGGAGCC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100010
..........................C-A--GTTCGGCA-TCCG---G-------TTCCGGAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000
..............................................................GCCCAAC------------------------------CGGG---CGCCGGAGTTGGCCC........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
.....................................................................................................................................GATGCTTGTGTGTTCGCCCTACAACTAA................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000
dp5
GAAGACGCACACGCATCTGG---CCTCC-------------CAGCAGCA----GCAGCAACAGCAGCAG------------------------------CCA-----GGAGGCACAGTCACAGCCACAGGTGAGCCGCTTGTGTGTTCGCCCTACAACTGAGCCGCTTTCTGTT-AT-CACTGTGTG---CATTGACC-ATTAACGCTCTTCCCTAACGAAGCTTTTATTTAAATTTT--GTACGCATGCAAACA--CCGATTCGTTA--C---GATCCGACCCGACCACCAAACCACCAACCGA-----TCAACCCT-CCTCCAAC---------ATCAAC--CGA-------ACCAATCCGCAC---------------------------ATCGAA------------------------------------------------------------------------------------------TTGCAGTGGATCACTCG---ATGCCAGTGCCCCTCGCGCCGGGAACGCAGCAACTGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................AGCA----GCAGCAACAGCAGCAG------------------------------CCA-----GGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCACTCG---ATGCCAGTGCCC........................2111.0010100000000
..............................................GCA----GCAGCAACAGCAGCAG------------------------------CCA-----GGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
..................................................................................................................................................................................................................................................ACGCATGCAAACA--CCGATTCGTTA--C---G..............................................................................................................................................................................................................................................................................2611.0010100000000
.........CACGCATCTGG---CCTCC-------------CA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
...................................................................................................................................................................CGCTTTCTGTT-AT-CACTGTGTG---C..................................................................................................................................................................................................................................................................................................................................................................2311.0010000100000
......................................................................................................................................................................TTTCTGTT-AT-CACTGTGTG---CATTG..............................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
...........................................GCAGCA----GCAGCAACAGCAGCAG------------------------------CCA-----......................................................................................................................................................................................................................................................................................................................................................................................................................................................2550.2010100000000
..............................................GCA----GCAGCAACAGCAGCAG------------------------------CCA-----......................................................................................................................................................................................................................................................................................................................................................................................................................................................2270.1410100000000
...........................................GCAGCA----GCAGCAACAGCAGCAG------------------------------CC............................................................................................................................................................................................................................................................................................................................................................................................................................................................2480.1310000100000
..............................................GCA----GCAGCAACAGCAGCAG------------------------------C.............................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1020200000000
droPer2
GAAGACGCACACGCATCTGG---CCTCC-------------CAGCAGCA----GCAGCAACAGCAGCAG------------------------------CCA-----GGAGGCACAGTCACAGCCACAGGTGAGCCGCTTGTGTGTTCGCCCTACAACTGAGCCGCTTTCTGTT-AT-CACTGTGTG---CATTGACC-ATTAACGCTCTTCCCTAACGAAGCTTTTATTTAAATTTT--GTACGCATGCAAACA--CCGATTCGTTA--C---GATCCG-----ACCACCAAACCGCCAACCGA-----TCAACCCT-CCTCCAAC---------ATCAAC--CGA-------ACCAATCCGCAC---------------------------ATCGAA------------------------------------------------------------------------------------------TTGCAGTGGATCACTCG---ATGCCAGTGCCCCTCGCGCCGGGAACGCAGCAACTGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........ACGCATCTGG---CCTCC-------------CAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001001000
droAna3
CAAGACGCATACGCACCAGCTCGC--C-CACGGCGGG---GCTG---GC----GCCGGTGGAGGAGGTG------------------------------GTGG---TGGAGGCGCCGTAACAGCCACAGGTGAGCCGCTTGTGTGTTCGCCCTACCAATGAGCCGCTTTCTGTTTATCCACTGTGTG---TATTGATT-ATTAACGCTCTTCCCTAACGAAGCTTTTATTTAAATCTT--GTACGCATGCCACTCCCT-------------------CCA-----T------------CATCTGATCGAAT-----CT-ACACCAAC---TCTA-------C------------ACCAATCC--------------------------------CCGAA-----------------------------------------------------------------------------------------TCTGCAGTGGATCACTCA---ATGCCCGCTCCTCTGGCGCCCGGAACGCAACAACTGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................................G---GC----GCCGGTGGAGGAGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002010010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGATCACTCA---ATGCCCGCT...........................2111.001100000
......GCATACGCACCAGCTCGC--C-CACGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
...........................................G---GC----GCCGGTGGAGGAGGTG------------------------------GTGG---T......................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCA---ATGCCCGCTCCTCTGGCGCCCGGAA...........2811.001010000
........................................................GGTGGAGGAGGTG------------------------------GTGG---T......................................................................................................................................................................................................................................................................................................................................................................................................................................................1830.331100000
................................................................................................................................................GTTCGCCCTACCAATGGT...............................................................................................................................................................................................................................................................................................................................................................................................1830.331000100
...........................................................GGAGGAGGTG------------------------------GTGG---TGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................1860.171100000
droBip1
CAAGACGCATACGCACCAGCTCGC--C-CACGGTGGG---GCTG---GC----GCCGGTGGAGGAGGTG------------------------------GTGG---TGGAGGCGCCGTAACAGCCACAGGTGAGCCGCTTGTGTGTTCGCCCTACCAATGAGCCGCTTTCTGTTTATCCACTGTGTG---TATTGATT-ATTAACGCTCTTCCCTAACGAAGCTTTTATTTAAATCTT--GTACGCATGCCACTCCTT-------------------CCA-----T---------------CTGATCGAAT-----CT-TCA---------CCAACTCC------------------AATCC--------------------------------TTGAA-----------------------------------------------------------------------------------------TCTGCAGTGGATCACTCA---ATGCCCGCTCCTCTGGCGCCCGGAACGCAACAACTGSizeHit CountTotal NormTotal
No Reads
droKik1
GAAGACGCATACGCATCAGATAGC--C-------------GGCGGCGGT----GGCGGTGGAGCAGGAGCTGGAGGACCCGGAGGATCAGCAGGAAGCGGTGG---CGGAGGCCCCGTAACAGCCACAGGTGAGCCGCTTGTGTGTTCGCCATACCAATGAGCCGCTTTCTGTT-AT-CACTGTGTG---CATTGATT-ATTAACGCTCTTCCCTAACGAAGCTTTTATTTAAATCTTGTGTACGCATGCTAATT--CCGTC-----ATCCAATCATCCA-----------------------------AT--------------------CCAACACCAAT--TG-------------ACC-GACAACC----------------------------A-----------------------------------------------------------------------------------------CCTGCAGTGGATCACTCC---ATGCCCCCAACTCTGGCGCCCGGGACCCAGCAGCTGSizeHit CountTotal NormTotal
No Reads
droFic1
CAAGACGCACACGCACCAGATCGC--G-------------CCAGGCGGC----GGCGGTGGAGCAGGAG------------------------------GCGG---CGGAGGAGCCGTCACAGCCACAGGTGAGCCGCTTGTGTGTTCGCCCTACCAATGAGCCGCTTTCTGTT-AT-CACTGTGTG---CATCGATTAATTAACGCTCTTCCCTAACGAAGCTTTTGTTTAAATCTT--GTACGCATGCCAACT--TCTAC-----AAAC---CGACCA-----A---------------CC-----TATCAACTTT-AA--------CTCCATCTCC------------------GTACC--------------------------------GCCAA-----------------------------------------------------------------------------------------TCTGCAGTGGATCACTCA---ATGCCCGCACCTCTGGCGCCCGGGACGCAGCAGCTGSizeHit CountTotal NormTotal
No Reads
droEle1
CAAGACGCACACGCACCAGATCGC--G-------------CCTGGTGG-------CGGCGGAGCAGGAG------------------------------GCGG---CGGAGGCGCCGTCACAGCCACAGGTGAGCCGCTTGTGTGTTCGCCCTACCAATGAGCCGCTTTCTGTT-AT-CACTGTGTG---CATCGATT-ATTAACGCTCTTCCCTAACGAAGCTTTTATTTAAATCTT--GTACGCATGCCCACA--TCGAC-----AAAC---CATCCA-----A------------------------TCAA---------------CGCCAACTCC------------------GTACC--------------------------------GCCAA-----------------------------------------------------------------------------------------CCTGCAGTGGATCACTCA---ATGCCCGCTCCCCTGGCGCCCGGAACGCAGCAGCTGSizeHit CountTotal NormTotal
No Reads
droRho1
CAAGACGCACTCGCACCAGATCGC--G-------------CCTGGTGG-------AGGCGGAGCAGGAG------------------------------GCGG---CGGAGGCGCCGTCACAGCCACAGGTGAGCCGCTTGTGTGTTCGCCCTACCAATGAGCCGCTTTCTGTT-AT-CACTGTGTG---CATTGATT-ATTAACGCTCTTCCCTAACGAAGCTTTTATTTAAATCTT--GTACGCATGCCAACA--TCGAC-----AAAC---CAACCA-----A------------------------TCAA---------------CTCTATCTCC------------------GTACC--------------------------------GCCAA-----------------------------------------------------------------------------------------CCTGCAGTGGATCACTCA---ATGCCCGCTCCTCTGGCGCCCGGGACGCAGCAGCTGSizeHit CountTotal NormTotal
No Reads
droBia1
CAAGACGCACACGCACCAGATCGC--T-------------CCCGGGGGC----GGGGGTGGAGCAGGAG------------------------------GCGGCGGAGCAGGAGCCGTCACAGCCACAGGTGAGCCGCTTGTGTGTTCGCCCTACCAATGAGCCGCTTTCTGTT-AT-CACTGTGTG---CATTGATT-AATAACGCTCTTCCCTAACGAAGCTTTTATTTAAATCTT--GTACGCATGCCAATT--TCGAC-----AAAC---CGACCA-----A---------------C------AATCAA---------------------CCCC------------------TCA--------------------------------------------------------------------------------------------------------------------------------CCTGCA---------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
CAAGACGCACACGCACCAACTGGG----------GGC--GCCTGGTGGA-GCAGCAGGAGGAGCAGGAG------------------------------GCGGCGGTGGAGGAGCCGTCACAGCCACAGGTGAGCCGCTTGTGTGTTCGCCCTACCAATGAGCCGCTTTCTGTT-AT-CACTGTGTG---CATTGATT-ATTAACGCTCTTCCCTAACGAAGCTTTTATTTAAATCTT--GTACGCATGCCAATT--TCGTC-----AAAC---CA---------A---------------C------AATCAA---------------CTTTAACC--------------------------------------------------------------------------------------------------------------------------------------------------------CCGCAGTGGATCACTCA---ATGCCCGCACCTCTGGCGCCCGGAACGCAGCAGCTGSizeHit CountTotal NormTotal
No Reads
droEug1
CAAGACGCACTCACACCAGATTGC--G-------------CCTGGAGGT----GGTGGTGGAACCGGAG------------------------------GCGG---CGGAGGCGCCGTCACAGCCACAGGTGAGCCGCTTGTGTGTTCGCCCTACCAATGAGCCGCTTTCTGTT-AT-CACTGTGTG---CATTGATT-ATTAACGCTCTTCCCTAACGAAGCTTTTATTTAAATCTT--GTACGCATGCCAACT--TCAAC-----AAAC---CATCCA-----A------------CAAC------AATCAA---------------CACCAACTCC------------------AAACC--------------------------------GCCCA-----------------------------------------------------------------------------------------TCTGCAGTGGATCACTCA---ATGCCCGCACCTCTGGCGCCAGGGACGCAGCAGCTGSizeHit CountTotal NormTotal
No Reads
dm3
CAAGACGCACACGCATCAGATAGC--G-------------CCTGGAGGC----GTCGGTGGAGCAGGAG------------------------------GCGG---CGGAGGCGCCGTCACAGCCACAGGTGAGCCGCTTGTGTGTTCGCCCTACCAATGAGCCGCTTTCTGTT-AT-CCATGTGTG---CATTGATT-ATTAACGCTCTTCCCTAACGAAGCTTTTATTTAAATCTT--GTACGCATGCTAACT--TCAAC-----AAAT---CATCCA-----A---------------C------AAT--------------------CCAACTCC------------------GTACC--------------------------------GTCAA-----------------------------------------------------------------------------------------TCTGCAGTGGATCACTCA---ATGCCCGCTCCTCTGGCGCCCGGGACGCAGCAGCTGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............TCAGATAGC--G-------------CCTGGAGGC----GTCGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000101000000110000000000100000100300000
..................GATAGC--G-------------CCTGGAGGC----GTCGGTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2317.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.................AGATAGC--G-------------CCTGGAGGC----GTCGGTGGAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TAGC--G-------------CCTGGAGGC----GTCGGTGGAGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................ACC--------------------------------GTCAA-----------------------------------------------------------------------------------------TCTGCAGTGGATC............................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................AGC--G-------------CCTGGAGGC----GTCGGTGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110100000000000000000000000000
.......................................................................................................................................................................................................................................................................................A-----A---------------C------AAT--------------------CCAACTCC------------------GTACC--------------------------------GT.....................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................GG---CGGAGGCGCCGTCACAGCCACA.................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................AGC--G-------------CCTGGAGGC----GTCGGTGGAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000
..................GATAGC--G-------------CCTGGAGGC----GTCGGTGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.................................................................................................................................GTGAGCCGCTTGTGTGTTCGCCC.........................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................TACC--------------------------------GTCAA-----------------------------------------------------------------------------------------TCTGCAGTGGATCACT.........................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................CTGGAGGC----GTCGGTGGAGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................GTGAGCCGCTTGTGTGTTCGCCCTA.......................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................GTACC--------------------------------GTCAA-----------------------------------------------------------------------------------------TCTGCAGTGGA..............................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GATAGC--G-------------CCTGGAGGC----GTCGGTGGAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCCGGGACGCAGCAGC..1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................CCTGGAGGC----GTCGGTGGAGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............ATCAGATAGC--G-------------CCTGGAGGC----GTCGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................TACC--------------------------------GTCAA-----------------------------------------------------------------------------------------TCTGCAGTGGATCACTCA---A...................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................AATGAGCCGCTTTCTGTT-AT-C..............................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
................................................C----GTCGGTGGAGCAGGAG------------------------------GC............................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................CTCC------------------GTACC--------------------------------GTCAA-----------------------------------------------------------------------------------------TCTGCAG..................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................C------------------GTACC--------------------------------GTCAA-----------------------------------------------------------------------------------------TCTGCAGTGG...............................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGGCGCCCGGGACGCAGCAGCT.2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
..............................................................................................................................................................................................................................................................................T---CATCCA-----A---------------C------AAT--------------------CCAACTCC------------------GTACC--------------------------------G......................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GATAGC--G-------------CCTGGAGGC----GTCGGTGGAGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.............................................AGGC----GTCGGTGGAGCAGGAG------------------------------GCGG---CG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................TTGTGTGTTCGCCCTACCAATGAGCCG............................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
............................................................................................................................................................................................................................................................................................................................................CAACTCC------------------GTACC--------------------------------GTCAA-----------------------------------------------------------------------------------------TCTG.....................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................TACC--------------------------------GTCAA-----------------------------------------------------------------------------------------TCTGCAGTGGAT.............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............CATCAGATAGC--G-------------CCTGGAGGC----GTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.........................................................................................................................................................................................................TAACGCTCTTCCCTAACGAAG...................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................A-----A---------------C------AAT--------------------CCAACTCC------------------GTACC--------------------------------GTCAA-----------------------------------------------------------------------------------------TC.......................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................A---------------C------AAT--------------------CCAACTCC------------------GTACC--------------------------------GTCAA-----------------------------------------------------------------------------------------TC.......................................................2511.0010000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GATAGC--G-------------CCTGGAGGC----GTCGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................T--------------------CCAACTCC------------------GTACC--------------------------------GTCAA-----------------------------------------------------------------------------------------TCTGC....................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................GCTTTCTGTT-AT-CCATGTGTG---...................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.....................AGC--G-------------CCTGGAGGC----GTCGGTGGAGCAGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................T---CATCCA-----A---------------C------AAT--------------------CCAACTCC------------------GTACC--------------------------------GTC....................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---ATGCCCGCTCCTCTGGCGC.................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................GTGAGCCGCTTGTGTGTT..............................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
........................................................................................................................................GCTTGTGTGTTCGCCCTACCAATGA................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TCAGATAGC--G-------------CCTGGAGGC----G...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................AGGCGCCGTCACAGCCACAG................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................GC--G-------------CCTGGAGGC----GTCGGTGGAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.................................................................................................................................................................................................................................................................TCAAC-----AAAT---CATCCA-----A---------------C------AAT--------------------CCAAC.................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CACACGCATCAGATAGC--G-------------CCTGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................AACTCC------------------GTACC--------------------------------GTCAA-----------------------------------------------------------------------------------------TCTGC....................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................GTGAGCCGCTTGTGTGTTCG............................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................C----GTCGGTGGAGCAGGAG------------------------------GCGG---.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
..............................................................................................................................CAGGTGAGCCGCTTGTGTGT...............................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................TTTTATTTAAATCTT--GTACGC...........................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TAGC--G-------------CCTGGAGGC----GTCGGTGGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...........................................................................................................GGAGGCGCCGTCACAGCCACAGTG..............................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................CCCTACCAATGAGCCGCTTTC.......................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..................GATAGC--G-------------CCTGGAGGC----GTCGGTGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................TGTGTGTTCGCCCTACCAATGAGC..............................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
.......................C--G-------------CCTGGAGGC----GTCGGTGGAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.AAGACGCACACGCATCAGATAGC--G-------------CC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................TGAGCCGCTTGTGTGTTCGCCCTACC.....................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............GCATCAGATAGC--G-------------CCTGGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................TTAAATCTT--GTACGCATGCTAACT--T...............................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................CCA-----A---------------C------AAT--------------------CCAACTCC------------------GTACC--------------------------------.......................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCTCCTCTGGCGCCCGGGACGCA.......2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................TCC------------------GTACC--------------------------------GTCAA-----------------------------------------------------------------------------------------TCTGCAGTGG...............................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........ACGCATCAGATAGC--G-------------CCTGGAGGC----............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................CTTTCTGTT-AT-CCATGTGTG---C..................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................................................................................AC-----AAAT---CATCCA-----A---------------C------AAT--------------------CCAACTCC------------------GT..........................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---ATGCCCGCTCCTCTGGCGCC................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................GC----GTCGGTGGAGCAGGAG------------------------------GCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................TCACAGCCACAGGTGAGCCGC.......................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.............................................AGGC----GTCGGTGGAGCAGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................TCC------------------GTACC--------------------------------GTCAA-----------------------------------------------------------------------------------------TCTGCAGTGGATC............................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................GTT-AT-CCATGTGTG---CATTGA.............................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
..............ATCAGATAGC--G-------------CCTGGAGGC----............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
............GCATCAGATAGC--G-------------CCTGGAGGC----GTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................TGTGTG---CATTGATT-ATTAACG...................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................ATAGC--G-------------CCTGGAGGC----GTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CACACGCATCAGATAGC--G-------------CCTGGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................ACC--------------------------------GTCAA-----------------------------------------------------------------------------------------TCTGCAGTGGATCACTC........................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................AT--------------------CCAACTCC------------------GTACC--------------------------------GTCAA-----------------------------------------------------------------------------------------TCTG.....................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
............GCATCAGATAGC--G-------------CCTGGAGGC----............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................TGTGTG---CATTGATT-ATTAAC....................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
...........................................................................................................GGAGGCGCCGTCACAGCCA...................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................AGATAGC--G-------------CCTGGAGGC----GTCGGTGGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................GG---CGGAGGCGCCGTCACAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCGCTCCTCTGGCGCCCGGGACGCA.......2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................C--G-------------CCTGGAGGC----GTCGGTGGAGCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........ACGCATCAGATAGC--G-------------CCTGGAGGC----GTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................GATAGC--G-------------CCTGGAGGC----GTCGGTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCTCTGGCGCCCGGGACGCA.......2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................GTGTTCGCCCTACCAATGAGC..............................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............GCATCAGATAGC--G-------------CCTGGAGGC----GTCGGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCA---ATGCCCGCTCCTCTGGC...................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................AGC--G-------------CCTGGAGGC----GTCGGTGGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............TCAGATAGC--G-------------CCTGGAGGC----GTTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................CCA-----A---------------C------AAT--------------------CCAACTCC------------------GTACC--------------------------------GTCAA-----------------------------------------------------------------------------------------TC.......................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCGCCCGGGACGCAGCAGCTG2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCA---ATGCCCGCTCCTCTGG....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..AGACGCACACGCATCAGATAGC--G-------------C........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
....................................................................................................................................................................................................................................................................................................................AAT--------------------CCAACTCC------------------GTACC--------------------------------GTCAA-----------------------------------------------------------------------------------------TCTGCAG..................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---ATGCCCGCTCCTCTGGCGC.................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CAAGACGCACACGCATCAGATA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCTCCTCTGGCGCCCGGGA...........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..........ACGCATCAGATAGC--G-------------CCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTCCTCTGGCGCCCGGGACGC........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCACTCA---ATGCCCGCTCCTCTGGCGCC................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................AGGC----GTCGGTGGAGCAGGAG------------------------------GC............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................AGGC----GTCGGTGGAGCAGGAG------------------------------G.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................G-------------CCTGGAGGC----GTCGGTGGAGCAGGAG------------------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................TCCA-----A---------------C------AAT--------------------CCAACTCC------------------GTACC--------------------------------GTC....................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................CAA-----------------------------------------------------------------------------------------TCTGCAGTGGATCACTCA---....................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................AACGCTCTTCCCTAACGAAGCT.................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
droSim2
CAAGACGCACACGCATCAGATAGC--G-------------CCTGGAGGC----GCCGGTGGAGCAGGAG------------------------------GCGG---CGGAGGCGCCGTCACAGCCACAGGTGAGCCGCTTGTGTGTTCGCCCTACCAATGAGCCGCTTTCTGTT-AT-CCATGTGTG---CATTGATT-ATTAACGCTCTTCCCTAACGAAGCTTTTATTTAAATCTT--GTACGCATGCTTACT--TCAAC-----AAAC---CATCCA-----A---------------C------AAT--------------------CCAACTCC------------------GTACC--------------------------------GCCAA-----------------------------------------------------------------------------------------TCTGCAGTGGATCACTCA---ATGCCCGCTCCTCTGGCGCCCGGGACGCAGCAGCTGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................GGAG------------------------------GCGG---CGGAGGCGCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000100000000000
.................AGATAGC--G-------------CCTGGAGGC----GCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000001000000
..............................................................................................................................................................................................................................................................................................................................................ACTCC------------------GTACC--------------------------------GCCAA-----------------------------------------------------------------------------------------TCTGCAGTGGAT.............................................2711.00100010000000000000
.........................................................................................................................................CTTGTGTGTTCGCCCTAC......................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
.....................................................GCCGGTGGAGCAGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1520.50100000000001000000
..............................................GGC----GCCGGTGGAGCAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1670.14100000000001000000
droSec2
CAAGACGCACACGCATCAGATAGC--G-------------CCTGGAGGC----GCCGGTGGAGCAGGAG------------------------------GCGG---CGGAGGCGCCGTCACAGCCACAGGTGAGCCGCTTGTGTGTTCGCCCTACCAATGAGCCGCTTTCTGTT-AT-CCATGTGTG---CATTGATT-ATTAACGCTCTTCCCTAACGAAGCTTTTATTTAAATCTT--GTACGCATGCTTACT--TCAAC-----AAAC---CATCCA-----A---------------C------AAT--------------------CCAACTCC------------------GTACC--------------------------------GCCAA-----------------------------------------------------------------------------------------TCTGCAGTGGATCACTCA---ATGCCCGCTCCTCTGGCGCCCGGGACGCAGCAGCTGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............................................................GCAGGAG------------------------------GCGG---CGGAGGCGCCGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
................................................C----GCCGGTGGAGCAGGAG------------------------------GC............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
..........................G-------------CCTGGAGGC----GCCGGTGGAGCAGGAG------------------------------GC............................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010010
.........CACGCATCAGATAGC--G-------------CCTGGAGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
droYak3
AAAGACGCACACGCATCAGATCGC--G-------------CCTGGAGGA----GCCGGTGGAGTAGGAG------------------------------GCGG---CGGAGGCGCCGTCACAGCCACAGGTGAGCCGCTTGTGTGTTCGCCCTACCAATAAGCCGCTTTCTGTT-AT-CACTGTGTA---CATTGATT-ATTAACGCTCTTCCCTAACGAAGCTTTTATTTAAATCTT--GTACGCATGCTAACT--TCGAC-----AAAC---CATCCA------------------------------------------------------ACTCC------------------GTACC--------------------------------GCCAA-----------------------------------------------------------------------------------------C--------------------------------------------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.....................CGC--G-------------CCTGGAGGA----GCCGGTGGAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000001
...........CGCATCAGATCGC--G-------------CCTGGAGGA----............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
.....................................................GCCGGTGGAGTAGGAG------------------------------GCGG---C......................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
droEre2
CAAGACGCACACGCATCAGATCGC--G-------------CCTGGAGGC----GCCGGTGGAGCAGGAG------------------------------GCGG---CGGAGGCGCCGTCACAGCCACAGGTGAGCCGCTTGTGTGTTCGCCCTACCAATGAGCCGCTTTCTGTT-AT-CACTGTGTG---CATTGATT-ATTAACGCTCTTCCCTAACGAAGCTTTTATTTAAATCTT--GTACGCATGCTAACT--TCGAC-----AAAC---CATCCA-----A---------------C------AAT--------------------CCAACTCC------------------GTACC--------------------------------GCCAA-----------------------------------------------------------------------------------------CCTGCAGTGGATCACTCA---ATGCCCGCTCCTCTGGCACCCGGGACTCAACAGCTGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
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Generated: 05/18/2015 at 01:54 AM