ID:

dmo_2080

Coordinate:

scaffold_6540:27021292-27021354 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.5 -13.4 -13.4 -13.3

Flybase annnotation

exon [dmoj_GLEANR_10363:11]; CDS [Dmoj\GI10435-cds]; exon [dmoj_GLEANR_10363:10]; CDS [Dmoj\GI10435-cds]; intron [Dmoj\GI10435-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------##################################################
AGAACGAAGGCTTCATGACGGGACGCGTCTTTCTGCCCTGGAAATTTATTGTAGGTCGCTCTCGCAGCAGAGGGGGAACATCCCTATTAATATGTGACTGTTTGTTGTTGTAGAATAAAACGGTTGGCTTGTTCGGCAACTGGAGCTTCAATCCCATGGACGA
**************************************************........((.....((((((.((...((((..........))))..)).)))))).....))**************************************************
Read size # Mismatch Hit Count Total Norm Total M046
female body
V110
male body
M060
embryo
................................................................................................................................TTGTTCGGCAACTGGAGCTTCAAT........... 24 0 1 1.00 1 1 0 0
.GAACGAAGGCTTCATGACGGGACGC......................................................................................................................................... 25 0 1 1.00 1 0 1 0
............................................................................................................................TTGCTTGTTCGGCAACTGGAGCT................ 23 1 1 1.00 1 0 0 1
...ACGAAGGCTTCATGACGGGACGC......................................................................................................................................... 23 0 1 1.00 1 0 1 0
..................................................................................................................ATAAAACGGTTGGCTTGT............................... 18 0 1 1.00 1 1 0 0
.GAACGAAGGCTTCATGACGGGACGCGT....................................................................................................................................... 27 0 1 1.00 1 0 1 0
.............................................................................................................................GGCTTGTTCGGCAACTGGAGC................. 21 0 1 1.00 1 0 1 0
.............................................................................................................................GGCTTGTTCGGCAACTGGA................... 19 0 1 1.00 1 1 0 0
..................................................GTAGGTCGCTCTCGCAGCAGAGGGG........................................................................................ 25 0 1 1.00 1 1 0 0
....................................................................................................................AAAACGGTTGGCTTGTTCGGCA......................... 22 0 1 1.00 1 1 0 0
.....................................................................................................................AAACGGTTGGCTTGTTCGGCA......................... 21 0 1 1.00 1 0 1 0
............................................................................................................................................TGGAGCTTCAATCCCATGGA... 20 0 1 1.00 1 1 0 0
.....................................................................................................................................CGGCAACTGGAGCTTCAATCCCATGGA... 27 0 1 1.00 1 1 0 0
.............................................................................................................................GGCTTGTTCGGCAACTGGAG.................. 20 0 1 1.00 1 1 0 0
.....GAAGGCTTCATGACGGGACGCGTC...................................................................................................................................... 24 0 1 1.00 1 1 0 0
.........................CGTCTTTCTGCCCTGGAA........................................................................................................................ 18 0 1 1.00 1 1 0 0
...............................................................GCTGCGGAGGGGGAACATT................................................................................. 19 3 13 0.08 1 0 1 0

Anti-sense strand reads

TCTTGCTTCCGAAGTACTGCCCTGCGCAGAAAGACGGGACCTTTAAATAACATCCAGCGAGAGCGTCGTCTCCCCCTTGTAGGGATAATTATACACTGACAAACAACAACATCTTATTTTGCCAACCGAACAAGCCGTTGACCTCGAAGTTAGGGTACCTGCT
**************************************************........((.....((((((.((...((((..........))))..)).)))))).....))**************************************************
Read size # Mismatch Hit Count Total Norm Total M046
female body
V110
male body
......................................................................................................................................CTGTGTACCTCGAAGTTAGG......... 20 3 3 14.00 42 40 2
.....................................................................................................................................GCTGTGTACCTCGAAGTTAGG......... 21 3 1 13.00 13 13 0
.....................................................................................................................................GCTGTGTACCTCGAAGTTAG.......... 20 3 4 11.00 44 15 29
......................................................................................................................................CTGTGTACCTCGAAGTTAG.......... 19 3 16 8.38 134 59 75
......................................................................................................................................CTGTTTACCTCGAAGTTAG.......... 19 2 2 0.50 1 0 1
........................................................................................................................................GTGTACCTCGAAGTTAGG......... 18 2 3 0.33 1 1 0
.......................................................................................................................................TGTGTACCTCGAAGTTAGG......... 19 3 20 0.15 3 3 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6540:27021242-27021404 + dmo_2080 AGAACGAAGGCTTCATGACGGGACGCGTCTTTCTGCCCTGGAAATTTATTGTAGGTCGCTCTCGCAGCAGAGGGGG-AACATCCCTA--------------------------------------------------------------------TTAATATGTG----------ACT-----GTT--TGTTGTTGTAGAATAAAACGGTTGGCTTGTTCGGCAACTGGAGCTTCAATCCCATGGACGA
droVir3 scaffold_12855:1274937-1275138 + dvi_3397 AAAATGAGGGCTTTATGACGGGTCGCGTGTTCCTGCCTTGGAAGTTTATTGTAAGTTTT------------AA-----CATGAAG---TCGTTTTTGGGTCAAGTGTCACCTAGCTGCTGTTTTACGAAGACTTTATTTACGAGCGAGCTAAAC----------TT--------CTCT--------GGCTTTTCTGCAGAATAAAACTGCCGGTTTGTTTGGCA-CTGGAGCTTTAATCCGCTGGACGA
droGri2 scaffold_2703:502-602 - GAAAC------------------------TTCCCTCTTAAGAATCTTATT----------------------------------------------------------------------------------------------------TAAT-TC-------TC--------TCTT--------TGCTCTCATCTAGAATAAAACGGCTGGATTGTTTGGCAATTGGAGTTTCAATCCGATGGATGA
droWil2 scf2_1100000004921:673551-673713 - AAAATGAAGGCTTCATGACAGGTCGCGTATTCCTGCCATGGAAGTTTATTGTAAGTCAA------------AA-AGA-AGC-----TAACAAGTGAT---------------------------------------------------ATAGTTTTTGTTGAGTGG--------------TTTTAT--TTTTTTTGCAGAATAAAACCGCTGGACTCTTTGGTAATTGGAGTTTCAATCCGCTGGACGA
dp5 2:124921-125081 + AGAACGAGGGCTTTATGACGGGTCGCGTTTTCCTCCCATGGAAGTTCATAGTAAGTTTA------------AA-GGG-AACAA-A-ACTCCGGCCTT---------------------------------------------------GCACATTCCTCTA-------------------ATGGAT--CTTCCTTGCAGAACAAAACTGCTGGATTGTTCGGCAATTGGAGCTTCAATCCCTTGGACGA
droPer2 scaffold_7:2916587-2916747 + AGAACGAGGGCTTTATGACGGGTCGCGTTTTCCTCCCATGGAAGTTCATAGTAAGTTTA------------AA-GGG-AACAA-A-ACCCCGGCCTT---------------------------------------------------GCACATTCCTCTA-------------------ATGGAT--CTTCCTTGCAGAACAAAACTGCTGGATTGTTCGGCAATTGGAGCTTCAATCCCTTGGACGA
droAna3 scaffold_13340:14392140-14392295 - AGAACGAAGGATTCATGACAGGACGCGTCTTCCTGCCCTGGAATTTCATTGTAAGCTT----------------GGG-TTTGT-A-ACTCGTGTCTT---------------------------------------------------GAACACATTATT---------------TAT------AT--ATTCTTTTTAGAACAAAACGGCAGGACTCTTTGGCAACTGGAGCTTCAACAAACTGGATGA
droBip1 scf7180000395971:773096-773252 + AGAACGAAGGATTTATGACAGGACGCGTTTTCCTACCCTGGAATTTCATAGTAAGTTTT------------GG-GGT-T---T-G-GCTCGTGACTT---------------------------------------------------TTATCCGCTAACAT--------------GT------AT--ATACTTTTTAGAACAAAACGGCAGGACTCTTTGGCAACTGGAGCTTCAACAAGCTGGATGA
droKik1 scf7180000301923:118729-118898 - AGAATGAGGGTTTCATGACCGGTCGCGTTTTCCTGCCCTGGAAGTTTATAGTGAGTGTTTT-------------GG-----------------CTCC---------------------T---TTA----------ATTTAT-------GTAAATTTTCTTAAACGTTATTTTATTTAT--------AAATTCAATCTAGAATAAAACGGCTGGTCTCTTTGGAAACTGGAGCTTTAACAAGCTGGATGA
droFic1 scf7180000453782:299626-299786 + AGAACGAGGGCTTCATGACGGGCCGCGTCTTCCTGCCCTGGAAGTTTATAGTGAGTGGATT-------------TG-TTGCCACCTA-----CT-TC--------------------TTC------GA-----TTATA----------TACAAC----------TT--------TC-------GAC--TCCCACTTCAGAACAAAACAGCCGGACTCTTTGGCAACTGGAGCTTCAACAAGCTGGACGA
droEle1 scf7180000491194:1006449-1006530 - TC---------------------------------------------------------------------------------CTTA---------T---------------------------------------------------CATTAT----------CT--------CTAT--------TTTTGAATTCCAGAATAAAACAGCCGGACTCTTTGGCAATTGGAGCTTTAATAAGTTGGACGA
droRho1 scf7180000777206:325861-326022 + AGAACGAGGGCTTCATGACGGGCCGCGTGTTTCTGCCCTGGAAGTTTATAGTGAGTGCA------------AA-TGG-AAA-----TGTAAAATATT---------------------------------------------------TCAGATTTCAAAA-ACGT--------TCTT--------TTTTTAATTACAGAATAAAACAGCAGGACTTTTTGGCAACTGGAGTTTTAATAAGCTGGACGA
droBia1 scf7180000302113:307421-307583 + AGAACGAGGGCTTCATGACGGGCCGCGTCTTCCTGCCCTGGAAGTTTATAGTGAGTGCC------------AA-ATA-A---T-A-TTTCTCATTTT---------------------------------------------------TTATACTTTATTTT--------------ATAAATTTAC--TATAATTCCAGAACAAAACAGCTGGTCTCTTTGGCAACTGGAGCTTTAATAAATTGGACGA
droTak1 scf7180000415286:119853-120014 - AGAACGAGGGCTACATGACGGGTCGCGTTTTCCTGCCCTGGAAGTTTATAGTGAGTGCA----------------GA-A---T-A-TTTCTAAATTT---------------------------------------------------TTACCTTTTATTTT--------------ATATATTTATTTTCCTATACCAGAACAAAACAGCTGGCCTCTTTGGCAACTGGAGCTTCAACAAGTTAGACGA
droEug1 scf7180000409166:26087-26244 + AGAACGAGGGTTTCATGACGGGTCGCGTTTTCCTGCCCTGGAAGTTTATAGTGAGTGAA------------AC-AGG-A---T-A-TTTTGGGTTTT---------------------------------------------------TTAGATTTTATTA-------------------TTTTGC--TTTAATCATAGAACAAAACGGCTGGACTCTTTGGCAACTGGAGCTTTAATAAGTTGGACGA
dm3 chr3R:27007391-27007556 - AGAACGAAGGATACATGACCGGTCGCGTCTTCCTGCCATGGAAGTTTATAGTAAGTAGCTA-------------GG-AAATTATGTATCTTAGTTTA---------------------------------------------------TTACAT----------TTTCACATTTTTAT--------TATTTAACTACAGAACAAAACCGCGGGACTCTTTGGCAACTGGAGTTTTAATAAACTAGACGA
droSim2 3r:26310869-26311036 - AGAACGAGGGATACATGACCGGTCGCGTTTTCCTGCCCTGGAAGTTTATAGTAAGTAGCTT-------------TG-AAATTATG---CTATATTTGA----AATA------------------------------------------TTACAT----------TTTCACATTTTCAT--------TATTTAACTACAGAACAAAACCGCGGGACTGTTTGGCAACTGGAGCTTTAATAAACTAGACGA
droSec2 scaffold_4:5825536-5825692 - AGAACGAGGGATACATGACCGGTCGCGTTTTCCTGCCCTGGAAGTTTATAGTAAGTAGCTA-------------GG-AAATTATATA-CTTGGATTA---------------------------------------------------CTACAT----------TT--------TCAT--------TATTTAACTACAGAACAAAACCGCGGGACTTTTTGGCAACTGGAGCTTTAATAAACTAGACGA
droYak3 3R:27943173-27943330 - AGAACGAGGGTTACATGACCGGTCGCGTCTTCCTGCCCTGGAAGTTTATAGTAAGTACCTA-------------GG-AATTTTCATGTTTTAATTTA---------------------------------------------------CTTAAT----------TT--------TCAT--------TATTTATCTGTAGAACAAAACCGCCGGACTGTTTGGCAACTGGAGCTTTAATAAACTGGACGA
droEre2 scaffold_4820:977479-977636 + AGAACGAGGGATACATGACCGGTCGCGTCTTCCTACCCTGGAAGTTTATAGTAGGTAGCCA-------------GG-AATTTACATACTCAAGTTTA---------------------------------------------------CTACAT----------TT--------TCAT--------TATCTAACTTCAGAACAAAACCGCTGGACTGTTTGGCAACTGGAGCTTTAACAAGCTAGACGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
AGAACGAAGGCTTCATGACGGGACGCGTCTTTCTGCCCTGGAAATTTATTGTAGGTCGCTCTCGCAGCAGAGGGGG-AACATCCCTA--------------------------------------------------------------------TTAATATGTG----------ACT-----GTT--TGTTGTTGTAGAATAAAACGGTTGGCTTGTTCGGCAACTGGAGCTTCAATCCCATGGACGASizeHit CountTotal NormTotalM046
Female-body
V041
Embryo
V049
Head
V056
Head
M060
Embryo
V110
Male-body
......................................................................................................................................................................................................................TTGTTCGGCAACTGGAGCTTCAAT...........2411.001100000
.GAACGAAGGCTTCATGACGGGACGC...............................................................................................................................................................................................................................2511.001000001
...ACGAAGGCTTCATGACGGGACGC...............................................................................................................................................................................................................................2311.001000001
........................................................................................................................................................................................................ATAAAACGGTTGGCTTGT...............................1811.001100000
.GAACGAAGGCTTCATGACGGGACGCGT.............................................................................................................................................................................................................................2711.001000001
...................................................................................................................................................................................................................GGCTTGTTCGGCAACTGGAGC.................2111.001000001
...................................................................................................................................................................................................................GGCTTGTTCGGCAACTGGA...................1911.001100000
..................................................GTAGGTCGCTCTCGCAGCAGAGGGG..............................................................................................................................................................................2511.001100000
..........................................................................................................................................................................................................AAAACGGTTGGCTTGTTCGGCA.........................2211.001100000
...........................................................................................................................................................................................................AAACGGTTGGCTTGTTCGGCA.........................2111.001000001
..................................................................................................................................................................................................................................TGGAGCTTCAATCCCATGGA...2011.001100000
...........................................................................................................................................................................................................................CGGCAACTGGAGCTTCAATCCCATGGA...2711.001100000
...................................................................................................................................................................................................................GGCTTGTTCGGCAACTGGAG..................2011.001100000
.....GAAGGCTTCATGACGGGACGCGTC............................................................................................................................................................................................................................2411.001100000
.........................CGTCTTTCTGCCCTGGAA..............................................................................................................................................................................................................1811.001100000
droVir3
AAAATGAGGGCTTTATGACGGGTCGCGTGTTCCTGCCTTGGAAGTTTATTGTAAGTTTT------------AA-----CATGAAG---TCGTTTTTGGGTCAAGTGTCACCTAGCTGCTGTTTTACGAAGACTTTATTTACGAGCGAGCTAAAC----------TT--------CTCT--------GGCTTTTCTGCAGAATAAAACTGCCGGTTTGTTTGGCA-CTGGAGCTTTAATCCGCTGGACGASizeHit CountTotal NormTotalM027
Male-body
M028
Head
M047
Female-body
M061
Embryo
SRR060654
Ovary
SRR060655
Testis
SRR060656
Ovary
SRR060657
Testis
SRR060658
Ovary
SRR060659
Testis
SRR060660
Ovary
SRR060661
Embryo
SRR060662
Embryo
SRR060663
Embryo
SRR060664
Male-body
SRR060665
Female-body
SRR060666
Male-body
SRR060667
Female-body
SRR060668
Male-body
SRR060669
Female-body
SRR060670
Testis
SRR060671
Male-body
SRR060672
Female-body
SRR060673
Ovary
SRR060674
Ovary
SRR060675
Ovary
SRR060676
Ovary
SRR060677
Ovary
SRR060678
Testis
SRR060679
Testis
SRR060680
Testis
SRR060681
Testis
SRR060682
Embryo
SRR060683
Testis
SRR060684
Embryo
SRR060685
Embryo
SRR060686
Embryo
SRR060687
Embryo
SRR060688
Ovary
SRR060689
Testis
SRR1106712
embryo_0-2h
SRR1106713
embryo_0-2h
SRR1106714
embryo_2-4h
SRR1106715
embryo_4-6h
SRR1106716
embryo_4-6h
SRR1106717
embryo_6-8h
SRR1106718
embryo_6-8h
SRR1106719
embryo_8-10h
SRR1106720
embryo_8-10h
SRR1106721
embryo_10-12h
SRR1106722
embryo_10-12h
SRR1106723
embryo_12-14h
SRR1106724
embryo_12-14h
SRR1106725
embryo_14-16h
SRR1106726
embryo_14-16h
SRR1106727
larvae
SRR1106728
larvae
SRR1106729
mixed whole adult body
SRR1106730
embryo_16-30h
V047
Embryo
V053
Head
V116
Male-body
GSM1528803
follicle cells
................GACGGGTCGCGTGTTCCTGC.....................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
..........................GTGTTCCTGCCTTGGAAGTT...........................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................A-CTGGAGCTTTAATCCGCT......1911.001001000000000000000000000000000000000000000000000000000000000000
.AAATGAGGGCTTTATGACGGGTCGCGT.............................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................AAACTGCCGGTTTGTTTGGC..........................2011.001000100000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................ATAAAACTGCCGGTTTGTTTGGCA-ACT.....................2711.001000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................AAAACTGCCGGTTTGTTT.............................1811.001000000000000000001000000000000000000000000000000000000000000000
.........................CGTGTTCCTGCCTTGGAAGTTTATT.......................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
....................GGTCGCGTGTTCCTGCCTTGGAAGT............................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000001000
AAAATGAGGGCTTTATGACGGGT..................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
.......................CGCGTGTTCCTGCCTTGGAA..............................................................................................................................................................................................................2011.001000000000000000000100000000000000000000000000000000000000000000
.........GCTTTATGACGGGTCGCGTG............................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................................................................................................................A-CTGGAGCTTTAATCCGCTGGA...2211.001000000000000000001000000000000000000000000000000000000000000000
..................CGGGTCGCGTGTTCCTGCC....................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000010
.......................CGCGTGTTCCTGCCTTGGA...............................................................................................................................................................................................................1911.001000100000000000000000000000000000000000000000000000000000000000
.......GGGCTTTATGACGGGTCGCG..............................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
.......................CGCGTGTTCCTGCCTTGGAAGT............................................................................................................................................................................................................2211.001000000000000000100000000000000000000000000000000000000000000000
.AAATGAGGGCTTTATGAC......................................................................................................................................................................................................................................1811.001000000000000000000100000000000000000000000000000000000000000000
.......................CGCGTGTTCCTGCCTTGTC...............................................................................................................................................................................................................1920.501000000000000000000000000000000000000000000000000000000000001000
droGri2
GAAAC------------------------TTCCCTCTTAAGAATCTTATT----------------------------------------------------------------------------------------------------TAAT-TC-------TC--------TCTT--------TGCTCTCATCTAGAATAAAACGGCTGGATTGTTTGGCAATTGGAGTTTCAATCCGATGGATGASizeHit CountTotal NormTotalM041
Female-body
V109
Male-body
No Reads
droWil2
AAAATGAAGGCTTCATGACAGGTCGCGTATTCCTGCCATGGAAGTTTATTGTAAGTCAA------------AA-AGA-AGC-----TAACAAGTGAT---------------------------------------------------ATAGTTTTTGTTGAGTGG--------------TTTTAT--TTTTTTTGCAGAATAAAACCGCTGGACTCTTTGGTAATTGGAGTTTCAATCCGCTGGACGASizeHit CountTotal NormTotalM020
Head
M045
Female-body
V117
Male-body
V118
Embryo
V119
Head
...................AGGTCGCGTATTCCTGCCATGGAA..............................................................................................................................................................................................................2419.00900180
....................GGTCGCGTATTCCTGCCATGGAA..............................................................................................................................................................................................................2313.00302100
..................CAGGTCGCGTATTCCTGCCATGGAA..............................................................................................................................................................................................................2513.00303000
................................................................................................................................................................................................................................ATTGGAGTTTCAATCCGCTGGA...2211.00101000
.........................................................................................................................................................................................................................TTTGGTAATTGGAGTTTCAATCCGC.......2511.00101000
....................GGTCGCGTATTCCTGCCATGGAAGT............................................................................................................................................................................................................2511.00100010
............................................................................................................................................................................................................AACCGCTGGACTCTTTGGT..........................1911.00101000
...................AGGTCGCGTATTCCTGCCATGGA...............................................................................................................................................................................................................2311.00100010
...................................................................................................................................................................................................................................GGAGTTTCAATCCGCTGGAC..2011.00110000
..............................................................................................................................................................................................................CCGCTGGACTCTTTGGTAATT......................2111.00110000
.........GCTTCATGACAGGTCGCGTATTCCTGCC....................................................................................................................................................................................................................2811.00101000
.................ACAGGTCGCGTATTCCTGCCATGGAA..............................................................................................................................................................................................................2611.00100010
.AAATGAAGGCTTCATGACA.....................................................................................................................................................................................................................................1911.00101000
..........................................................................................................................................................................................................AAAACCGCTGGACTCTTTGGT..........................2111.00101000
..............ATGACAGGTCGCGTATTC.........................................................................................................................................................................................................................1811.00100010
...................AGGTCGCGTATTCCTGCCATGGAAGT............................................................................................................................................................................................................2611.00100010
...ATGAAGGCTTCATGACAGGT..................................................................................................................................................................................................................................2011.00100100
..................CAGGTCGCGTATTCCTGCCATGGAAGT............................................................................................................................................................................................................2711.00100100
...............................................................................................................................................................................................................................AATTGGAGTTTCAATCCGCTGGAC..2411.00101000
.......................CGCGTATTCCTGCCATGGAAG.............................................................................................................................................................................................................2111.00100100
....................GGTCGCGTATTCCTGCCATGGA...............................................................................................................................................................................................................2211.00101000
......................................................................................................................................................................................................................................GTTTCAATCCGCTGGACGA1911.00100010
.AAATGAAGGCTTCATGAC......................................................................................................................................................................................................................................1811.00101000
.............................................................................................................................................................................................................................GTAATTGGAGTTTCAATCCGCTG.....2311.00101000
....................................................................................................................................................................................................................GACTCTTTGGTAATTGGA...................1811.00101000
..AATGAAGGCTTCATGACAGGT..................................................................................................................................................................................................................................2111.00100100
............................................................................................................................................................................................................AACCGCTGGACTCTTTGGTAATTGGA...................2611.00101000
.......................................................................................................................................................................................................................TCTTTGGTAATTGGAGTTTCAATCCGCT......2811.00101000
..........CTTCATGACAGGTCGCGTATTCCTGCC....................................................................................................................................................................................................................2711.00100010
........................................................................................................................................................................................................ATAAAACCGCTGGACTCTTTGGTA.........................2411.00101000
...............................................................................................................................................................................................................CGCTGGACTCTTTGGTAATT......................2011.00101000
................................................................................................................................................................................................................GCTGGACTCTTTGGTAATTG.....................2011.00101000
.............CATGACAGGTCGCGTATT..........................................................................................................................................................................................................................1811.00100010
dp5
AGAACGAGGGCTTTATGACGGGTCGCGTTTTCCTCCCATGGAAGTTCATAGTAAGTTTA------------AA-GGG-AACAA-A-ACTCCGGCCTT---------------------------------------------------GCACATTCCTCTA-------------------ATGGAT--CTTCCTTGCAGAACAAAACTGCTGGATTGTTCGGCAATTGGAGCTTCAATCCCTTGGACGASizeHit CountTotal NormTotalM022
Male-body
M040
Female-body
M059
Embryo
M062
Head
V043
Embryo
V051
Head
V112
Male-body
SRR902010
Ovary
SRR902011
Testis
SRR902012
CNS imaginal disc
...............................................................................................................................................................................................................................AATTGGAGCTTCAATCCCTTGGAC..24122.002221450001000
............................................................................................................................................................................................................................GGCAATTGGAGCTTCAATCCCTTGGAC..2716.0060230100000
..........................................................................................................................................................................................................AAAACTGCTGGATTGTTCGGC..........................2115.0050320000000
................................................................................................................................................................................................................................ATTGGAGCTTCAATCCCTTGGAC..2315.0050410000000
...........................................................................................................................................................................................................................CGGCAATTGGAGCTTCAATCCCTTGGAC..2814.0040220000000
....................................................................................................................................................................................................................GATTGTTCGGCAATTGGAGCT................2113.0030300000000
..................................................................................................................................................................................................................................TGGAGCTTCAATCCCTTGGAC..2113.0030210000000
...................................................................................................................................................................................................................................GGAGCTTCAATCCCTTGGAC..2013.0030300000000
.......................................................................................................................................................................................................AACAAAACTGCTGGATTGTTCGG...........................2312.0020200000000
.....GAGGGCTTTATGACGGGT..................................................................................................................................................................................................................................1812.0020200000000
................................................................................................................................................................................................................GCTGGATTGTTCGGCAATTGGAGCTT...............2612.0020020000000
...........................................................................................................................................................................................................AAACTGCTGGATTGTTCGGC..........................2012.0020200000000
........................................................................................................................................................................................................................GTTCGGCAATTGGAGCTTC..............1912.0020200000000
...............................................................................................................................................................................................................................AATTGGAGCTTCAATCCCTTG.....2112.0020200000000
.................................................................................................................................................................................................................................TTGGAGCTTCAATCCCTTGGAC..2212.0020200000000
................................................................................................................................................................................................................................ATTGGAGCTTCAATCCCTTG.....2012.0020200000000
...............................................................................................................................................................................................................................AATTGGAGCTTCAATCCCTTGGA...2312.0020100001000
..........................................................................................................................................................................................................AAAACTGCTGGATTGTTCGG...........................2012.0020100100000
.GAACGAGGGCTTTATGACGGG...................................................................................................................................................................................................................................2111.0010010000000
..AACGAGGGCTTTATGACGGGTCGCGT.............................................................................................................................................................................................................................2611.0010100000000
..............................................................................................................................................................CTA-------------------ATGGAT--CTTCCTTGCAGAACAAA............................................2611.0010100000000
...........................................................................................................................................................................................................AAACTGCTGGATTGTTCGGCAATTGG....................2611.0010100000000
..............................................................................................................................................................................................................CTGCTGGATTGTTCGGCAATTGGAGC.................2611.0010100000000
...................GGGTCGCGTTTTCCTCCCATG.................................................................................................................................................................................................................2111.0010100000000
....................GGTCGCGTTTTCCTCCCATGGA...............................................................................................................................................................................................................2211.0010100000000
........................................................................................................................................................................................................................GTTCGGCAATTGGAGCTTCAATCCCTTG.....2811.0010100000000
.......................CGCGTTTTCCTCCCATGGAA..............................................................................................................................................................................................................2011.0010100000000
....CGAGGGCTTTATGACGGGTCGC...............................................................................................................................................................................................................................2211.0010100000000
............................................................................................................................................................................................................AACTGCTGGATTGTTCGGCAATTGGAGC.................2811.0010100000000
.........................................................................................................................................................................................................................TTCGGCAATTGGAGCTTCAATCCCTTGG....2811.0010100000000
............................................................................................................................................................................................................................GGCAATTGGAGCTTCAATCCCTTGGACG.2811.0010100000000
........................................................................................................................................................................................................................GTTCGGCAATTGGAGCTTCAATCC.........2411.0010100000000
.GAACGAGGGCTTTATGACGG....................................................................................................................................................................................................................................2011.0010100000000
.....................................................................................................................................................................................................................ATTGTTCGGCAATTGGAGCTTC..............2211.0010100000000
........................................................................................................................................................................................................ACAAAACTGCTGGATTGTTCGGC..........................2311.0010000100000
....................................................................................................................................................................................................................GATTGTTCGGCAATTGGAGCTT...............2211.0010100000000
....................................................................................................................................................................................................................GATTGTTCGGCAATTGGAGCTTCA.............2411.0010100000000
........................................................................................................................................................................................................................GTTCGGCAATTGGAGCTTCA.............2011.0010100000000
....................GGTCGCGTTTTCCTCCCATGGAAGTT...........................................................................................................................................................................................................2611.0010100000000
.......................................................................................................................................................................................................AACAAAACTGCTGGATTGT...............................1911.0010100000000
.......................................................................................................................................................................................................................TGTTCGGCAATTGGAGCTTCAATCCCT.......2711.0010100000000
............................................................................................................................................................................................................AACTGCTGGATTGTTCGGCA.........................2011.0010100000000
.....GAGGGCTTTATGACGGGTC.................................................................................................................................................................................................................................1911.0010100000000
....................................................................................................................................................................................................................GATTGTTCGGCAATTGGA...................1811.0010100000000
.GAACGAGGGCTTTATGAC......................................................................................................................................................................................................................................1811.0010100000000
.......................CGCGTTTTCCTCCCATGG................................................................................................................................................................................................................1811.0010100000000
............................................................................................................................................................................................................................GGCAATTGGAGCTTCAATCC.........2011.0010100000000
.....GAGGGCTTTATGACGGGTCGC...............................................................................................................................................................................................................................2111.0010100000000
............................................................................................................................................................................................................AACTGCTGGATTGTTCGGC..........................1911.0010100000000
....................................................................................................................................................................................................................GATTGTTCGGCAATTGGAGC.................2011.0010100000000
...ACGAGGGCTTTATGACGGGT..................................................................................................................................................................................................................................2011.0010100000000
.........GCTTTATGACGGGTCGCGT.............................................................................................................................................................................................................................1911.0010000100000
............................................................................................................................................................................................................................GGCAATTGGAGCTTCAATCCCTTG.....2411.0010100000000
....................................................................................................................................................................................................................................GAGCTTCAATCCCTTGGAC..1911.0010100000000
..............................................................................................................................................................................................................................CAATTGGAGCTTCAATCCCTTGGAC..2511.0010100000000
.................................................................................................................................................................................................................CTGGATTGTTCGGCAATTG.....................1911.0010100000000
..................................................................................................................................................................................................................................TGGAGCTTCAATCCCTTG.....1811.0010100000000
.....................................................................................................................................................................................................................................AGCTTCAATCCCTTGGAC..1811.0010010000000
...........................................................................................................................................................................................................................CGGCAATTGGAGCTTCAATCCCTT......2411.0010100000000
.....GAGGGCTTTATGACGGGTCGCGT.............................................................................................................................................................................................................................2311.0010000100000
...................................................................................................................................................................................................................GGATTGTTCGGCAATTGGAGCTTC..............2411.0010000001000
..AACGAGGGCTTTATGACG.....................................................................................................................................................................................................................................1811.0010100000000
......AGGGCTTTATGACGGGTCGC...............................................................................................................................................................................................................................2011.0010100000000
...............................................................................................................................................................................................................................AATTGGAGCTTCAATCCCTT......2011.0010100000000
droPer2
AGAACGAGGGCTTTATGACGGGTCGCGTTTTCCTCCCATGGAAGTTCATAGTAAGTTTA------------AA-GGG-AACAA-A-ACCCCGGCCTT---------------------------------------------------GCACATTCCTCTA-------------------ATGGAT--CTTCCTTGCAGAACAAAACTGCTGGATTGTTCGGCAATTGGAGCTTCAATCCCTTGGACGASizeHit CountTotal NormTotalM021
Embryo
M042
Female-body
V042
Embryo
V050
Head
V057
Head
V111
Male-body
...............................................................................................................................................................................................................................AATTGGAGCTTCAATCCCTTGGAC..24119.00191630000
...........................................................................................................................................................................................................................CGGCAATTGGAGCTTCAATCCCTTGGAC..28114.00141400000
................................................................................................................................................................................................................................ATTGGAGCTTCAATCCCTTGGAC..23113.00131120000
...........................................................................................................................................................................................................AAACTGCTGGATTGTTCGGC..........................2018.008440000
.....................................................................................................................................................................................................................................AGCTTCAATCCCTTGGAC..1818.008800000
............................................................................................................................................................................................................................GGCAATTGGAGCTTCAATCCCTTGGAC..2717.007700000
.............................................................................................................................................................................................................ACTGCTGGATTGTTCGGC..........................1817.007700000
....CGAGGGCTTTATGACGGGTC.................................................................................................................................................................................................................................2015.005500000
....................................................................................................................................................................................................................................GAGCTTCAATCCCTTGGAC..1915.005410000
............................................................................................................................................................................................................AACTGCTGGATTGTTCGGC..........................1915.005311000
..........................................................................................................................................................................................................AAAACTGCTGGATTGTTCGGC..........................2114.004301000
.GAACGAGGGCTTTATGACGGGT..................................................................................................................................................................................................................................2213.003000003
.................................................................................................................................................................................................................................TTGGAGCTTCAATCCCTTGGAC..2213.003300000
.....GAGGGCTTTATGACGGGTCGC...............................................................................................................................................................................................................................2113.003010002
.....GAGGGCTTTATGACGGGT..................................................................................................................................................................................................................................1812.002010001
........................................................................................................................................................................................................................GTTCGGCAATTGGAGCTTCAAT...........2212.002200000
.........................................................................................................................................................................................................CAAAACTGCTGGATTGTTCGGC..........................2212.002200000
.....................GTCGCGTTTTCCTCCCATGGA...............................................................................................................................................................................................................2112.002000002
.............................................................................................................................................................................................................................GCAATTGGAGCTTCAATCCCTT......2212.002020000
.....GAGGGCTTTATGACGGGTCGCGT.............................................................................................................................................................................................................................2312.002000002
...ACGAGGGCTTTATGACGGGTCGC...............................................................................................................................................................................................................................2311.001000001
.GAACGAGGGCTTTATGACG.....................................................................................................................................................................................................................................1911.001000001
............................................................................................................................................................................................................AACTGCTGGATTGTTCGGCA.........................2011.001100000
..........................................................................................................................................................................................................AAAACTGCTGGATTGTTCGG...........................2011.001010000
.GAACGAGGGCTTTATGACGGGTCGC...............................................................................................................................................................................................................................2511.001000001
..........................................................................................................................................................................................................AAAACTGCTGGATTGTTCGGCA.........................2211.001100000
..................................................................................................................................................................................................................................TGGAGCTTCAATCCCTTGGAC..2111.001010000
..AACGAGGGCTTTATGACGGGT..................................................................................................................................................................................................................................2111.001010000
...............................................................................................................................................................................................................................AATTGGAGCTTCAATCCCTTG.....2111.001010000
...ACGAGGGCTTTATGACGGGTCGCGT.............................................................................................................................................................................................................................2511.001100000
........................GCGTTTTCCTCCCATGGAAGTTC..........................................................................................................................................................................................................2311.001010000
.............................................................................................................................................................................................................................GCAATTGGAGCTTCAATCCCTTG.....2311.001010000
..............................TCCTCCCATGGAAGTTCATA.......................................................................................................................................................................................................2011.001010000
..AACGAGGGCTTTATGACGG....................................................................................................................................................................................................................................1911.001010000
..............................................................................................................................................................................................................................CAATTGGAGCTTCAATCCCTTGGAC..2511.001100000
........................................................................................................................................................................................................................GTTCGGCAATTGGAGCTT...............1811.001010000
.......................................................................................................................................................................................................AACAAAACTGCTGGATTGTTCGGC..........................2411.001010000
........................................................................................................................................................................................................................GTTCGGCAATTGGAGCTTCAATCCCTT......2711.001100000
........................................................................................................................................................................................................................GTTCGGCAATTGGAGCTTCA.............2011.001010000
...ACGAGGGCTTTATGACGGGTCGCGG.............................................................................................................................................................................................................................2511.001100000
........................................................................................................................................................................................................................GTTCGGCAATTGGAGCTTCAATCCCT.......2611.001010000
.....GAGGGCTTTATGACGGGTCGCG..............................................................................................................................................................................................................................2211.001000001
......................................................................................................................................................................................................................TTGTTCGGCAATTGGAGCTTCAAT...........2411.001100000
.....................................................................................................................................................................................................................ATTGTTCGGCAATTGGAGCTTCAAT...........2511.001100000
.....................GTCGCGTTTTCCTCCCATG.................................................................................................................................................................................................................1911.001010000
droAna3
AGAACGAAGGATTCATGACAGGACGCGTCTTCCTGCCCTGGAATTTCATTGTAAGCTT----------------GGG-TTTGT-A-ACTCGTGTCTT---------------------------------------------------GAACACATTATT---------------TAT------AT--ATTCTTTTTAGAACAAAACGGCAGGACTCTTTGGCAACTGGAGCTTCAACAAACTGGATGASizeHit CountTotal NormTotalM044
Female-body
M058
Embryo
V039
Embryo
V055
Head
V105
Male-body
V106
Head
..AACGAAGGATTCATGACAGGACGC...............................................................................................................................................................................................................................2412.002020000
........................................................................................................................................................................................................................CTTTGGCAACTGGAGCTTCAAC...........2212.002101000
.................................................................................................................................................................................................................CAGGACTCTTTGGCAACTGGAGC.................2311.001100000
......................................................................................................................................................................................................................CTCTTTGGCAACTGGAGC.................1811.001010000
.................................................................................................................................................................................................................................CTGGAGCTTCAACAAACTGGAT..2211.001010000
........GGATTCATGACAGGACGCGTC............................................................................................................................................................................................................................2111.001010000
...............................................................................................................................................................................................................................AACTGGAGCTTCAACAAACTGGATG.2511.001100000
...............................................................................................................................................................................................................................AACTGGAGCTTCAACAAACTG.....2111.001001000
....................GGACGCGTCTTCCTGCCCTGGA...............................................................................................................................................................................................................2211.001010000
.........GATTCATGACAGGACGCGT.............................................................................................................................................................................................................................1911.001000010
............................................................................................................................................................................................................AACGGCAGGACTCTTTGGCAACTGGAG..................2711.001010000
.................................................................................................................................................................................................................................CTGGAGCTTCAACAAACTGG....2011.001001000
......................................................................................................................................................................................................................CTCTTTGGCAACTGGAGCT................1911.001010000
.GAACGAAGGATTCATGACAGGA..................................................................................................................................................................................................................................2211.001100000
........................................................................................................................................................................................................................CTTTGGCAACTGGAGCTTCAACAAACTG.....2811.001010000
..........................................................................................................................................................................................................AAAACGGCAGGACTCTTTGGCAACTGG....................2711.001010000
.............CATGACAGGACGCGTCTTCCTGCCC...................................................................................................................................................................................................................2511.001010000
...........................................................................................................................................................................................................AAACGGCAGGACTCTTTGGCAACTGGA...................2711.001100000
.............CATGACAGGACGCGTCTTCCTGCCCT..................................................................................................................................................................................................................2611.001100000
.GAACGAAGGATTCATGACAG....................................................................................................................................................................................................................................2011.001000010
...................................................................................................................................................................................................................................GGAGCTTCAACAAACTGGATGA2211.001010000
.............CATGACAGGACGCGTCTTCCTGCCCTG.................................................................................................................................................................................................................2711.001000010
..................................................................................................................................................................................................................AGGACTCTTTGGCAACTG.....................1811.001010000
.......AGGATTCATGACAGGACGCGTCTTCC........................................................................................................................................................................................................................2611.001010000
............................................................................................................................................................................................................................GGCAACTGGAGCTTCAACAAACTGG....2511.001100000
........................................................................................................................................................................................................................CTTTGGCAACTGGAGCTTCAACAAA........2511.001000010
..................CAGGACGCGTCTTCCTGCCCT..................................................................................................................................................................................................................2111.001010000
...............................................................................................................................................................................................................GGCAGGACTCTTTGGCAACTGGAGCTTC..............2811.001010000
.....................GACGCGTCTTCCTGCCCTGGAAT.............................................................................................................................................................................................................2311.001000010
..........ATTCATGACAGGACGCGTCTTCCT.......................................................................................................................................................................................................................2411.001010000
............................................................................................................................................................................................................AACGGCAGGACTCTTTGGCAACTGGA...................2611.001100000
.............CATGACAGGACGCGTCTTC.........................................................................................................................................................................................................................1911.001100000
....................................................................................................................................................................................................................GACTCTTTGGCAACTGGAGCTT...............2211.001010000
.......................................................................................................................................................................................................AACAAAACGGCAGGACTCTTTGGCAAC.......................2711.001010000
.....GAAGGATTCATGACAGGACGC...............................................................................................................................................................................................................................2111.001010000
...............................................................................................................................................................................................................GGCAGGACTCTTTGGCAACTGGAGC.................2511.001010000
.GAACGAAGGATTCATGACA.....................................................................................................................................................................................................................................1911.001010000
....................................................................................................................................................................................................................GACTCTTTGGCAACTGGAGCTTCAAC...........2611.001100000
.....................GACGCGTCTTCCTGCCCTG.................................................................................................................................................................................................................1911.001100000
droBip1
AGAACGAAGGATTTATGACAGGACGCGTTTTCCTACCCTGGAATTTCATAGTAAGTTTT------------GG-GGT-T---T-G-GCTCGTGACTT---------------------------------------------------TTATCCGCTAACAT--------------GT------AT--ATACTTTTTAGAACAAAACGGCAGGACTCTTTGGCAACTGGAGCTTCAACAAGCTGGATGASizeHit CountTotal NormTotal
No Reads
droKik1
AGAATGAGGGTTTCATGACCGGTCGCGTTTTCCTGCCCTGGAAGTTTATAGTGAGTGTTTT-------------GG-----------------CTCC---------------------T---TTA----------ATTTAT-------GTAAATTTTCTTAAACGTTATTTTATTTAT--------AAATTCAATCTAGAATAAAACGGCTGGTCTCTTTGGAAACTGGAGCTTTAACAAGCTGGATGASizeHit CountTotal NormTotal
No Reads
droFic1
AGAACGAGGGCTTCATGACGGGCCGCGTCTTCCTGCCCTGGAAGTTTATAGTGAGTGGATT-------------TG-TTGCCACCTA-----CT-TC--------------------TTC------GA-----TTATA----------TACAAC----------TT--------TC-------GAC--TCCCACTTCAGAACAAAACAGCCGGACTCTTTGGCAACTGGAGCTTCAACAAGCTGGACGASizeHit CountTotal NormTotal
No Reads
droEle1
TC---------------------------------------------------------------------------------CTTA---------T---------------------------------------------------CATTAT----------CT--------CTAT--------TTTTGAATTCCAGAATAAAACAGCCGGACTCTTTGGCAATTGGAGCTTTAATAAGTTGGACGASizeHit CountTotal NormTotal
No Reads
droRho1
AGAACGAGGGCTTCATGACGGGCCGCGTGTTTCTGCCCTGGAAGTTTATAGTGAGTGCA------------AA-TGG-AAA-----TGTAAAATATT---------------------------------------------------TCAGATTTCAAAA-ACGT--------TCTT--------TTTTTAATTACAGAATAAAACAGCAGGACTTTTTGGCAACTGGAGTTTTAATAAGCTGGACGASizeHit CountTotal NormTotal
No Reads
droBia1
AGAACGAGGGCTTCATGACGGGCCGCGTCTTCCTGCCCTGGAAGTTTATAGTGAGTGCC------------AA-ATA-A---T-A-TTTCTCATTTT---------------------------------------------------TTATACTTTATTTT--------------ATAAATTTAC--TATAATTCCAGAACAAAACAGCTGGTCTCTTTGGCAACTGGAGCTTTAATAAATTGGACGASizeHit CountTotal NormTotal
No Reads
droTak1
AGAACGAGGGCTACATGACGGGTCGCGTTTTCCTGCCCTGGAAGTTTATAGTGAGTGCA----------------GA-A---T-A-TTTCTAAATTT---------------------------------------------------TTACCTTTTATTTT--------------ATATATTTATTTTCCTATACCAGAACAAAACAGCTGGCCTCTTTGGCAACTGGAGCTTCAACAAGTTAGACGASizeHit CountTotal NormTotal
No Reads
droEug1
AGAACGAGGGTTTCATGACGGGTCGCGTTTTCCTGCCCTGGAAGTTTATAGTGAGTGAA------------AC-AGG-A---T-A-TTTTGGGTTTT---------------------------------------------------TTAGATTTTATTA-------------------TTTTGC--TTTAATCATAGAACAAAACGGCTGGACTCTTTGGCAACTGGAGCTTTAATAAGTTGGACGASizeHit CountTotal NormTotal
No Reads
dm3
AGAACGAAGGATACATGACCGGTCGCGTCTTCCTGCCATGGAAGTTTATAGTAAGTAGCTA-------------GG-AAATTATGTATCTTAGTTTA---------------------------------------------------TTACAT----------TTTCACATTTTTAT--------TATTTAACTACAGAACAAAACCGCGGGACTCTTTGGCAACTGGAGTTTTAATAAACTAGACGASizeHit CountTotal NormTotalGSM154618
Ovary
GSM154620
Ovary
GSM154621
Ovary
GSM154622
Ovary
GSM180328
Head
GSM180329
Mixed-body
GSM180330
Embryo
GSM180331
Embryo
GSM180332
Embryo
GSM180333
Embryo
GSM180334
Larvae
GSM180335
Disc
GSM180336
Pupae
GSM180337
S2
GSM231091
Ovary
GSM239041
Head
GSM239050
Head
GSM239051
S2
GSM239052
S2
GSM246084
Head
GSM266765
S2
GSM280082
Ovary
GSM280083
Ovary
GSM280084
Ovary
GSM280085
Testis
GSM280086
Ovary
GSM280087
S2-NP
GSM280088
S2-NP
GSM312995
Head
GSM313160
Head
GSM313161
Head
GSM313162
Head
GSM313163
Head
GSM313164
Head
GSM313165
Head
GSM343287
Embryo
GSM379050
Ovary
GSM379051
Ovary
GSM379052
Ovary
GSM379053
Ovary
GSM379054
Ovary
GSM379055
Ovary
GSM379056
Ovary
GSM379057
Ovary
GSM379058
Ovary
GSM379059
Ovary
GSM379060
Ovary
GSM379061
Ovary
GSM379062
Ovary
GSM379063
Ovary
GSM379064
Ovary
GSM379065
Ovary
GSM379066
Ovary
GSM379067
Ovary
GSM424739
S2
GSM424740
S2
GSM424741
S2
GSM467729
Female-body
GSM467730
Female-body
GSM467731
Female-body
M002
CS
M003
Male-body
M004
Male-body
M005
ML-DmD32
M006
ML-DmD32
M029
OSC
M030
OSC
M031
OSC
M032
S2-R+
M033
S2-R+
M034
S2-R+
M035
S2-R+
M036
S2-R+
M037
S2-R+
M038
S2-R+
M039
S2-R+
M048
S2-R+
OSS2
OSS
OSS6
OSS
OSS7
OSS
OSS8
OSS
S1
Head
S10
Embryo
S11
Embryo
S12
Embryo
S13
Embryo
S14
Embryo
S15
S2-GMR
S16
Kc
S17
Larvae
S18
Larvae
S19
Pupae
S2
Head
S20
Pupae
S21
Disc
S22
Head
S23
Female-body
S24
Male-body
S25
Larvae
S26
Larvae
S27
Pupae
S28
Pupae
S29
Head
S3
Male-body
S30
S2-GMR
S31
S2
S32
S2
S33
Kc
S34
Kc
S35
Kc
S4
Female-body
S5
Disc
S6
Embryo
S7
Embryo
S8
S2
S9
Embryo
SRR001337
Head
SRR001338
Head
SRR001339
Head
SRR001340
Head
SRR001341
Head
SRR001342
Head
SRR001343
Head
SRR001344
Head
SRR001345
Head
SRR001346
Head
SRR001347
Head
SRR001348
Head
SRR001349
Head
SRR001664
Head
SRR010951
Ovary
SRR010952
Ovary
SRR010953
Ovary
SRR010954
Ovary
SRR010955
Ovary
SRR010956
Ovary
SRR010957
Ovary
SRR010958
Ovary
SRR010959
Ovary
SRR010960
Ovary
SRR014268
Embryo
SRR014269
Embryo
SRR014270
Embryo
SRR014271
Embryo
SRR014272
Embryo
SRR014273
Ovary
SRR014274
Ovary
SRR014275
Ovary
SRR014276
Ovary
SRR014277
Ovary
SRR014278
Ovary
SRR014279
Ovary
SRR014280
Ovary
SRR014281
Ovary
SRR014282
Ovary
SRR023197
S2
SRR023399
S2
SRR023400
S2
SRR023402
S2
SRR023407
S2
SRR029028
S2
SRR029029
S2
SRR029030
S2
SRR029031
S2
SRR029032
S2
SRR029033
S2
SRR029608
Head
SRR029633
Head
SRR030145
gb3
SRR031692
Head
SRR031693
Head
SRR031694
Head
SRR031696
Head
SRR031697
Head
SRR031698
Head
SRR031699
Head
SRR031700
Head
SRR031701
Head
SRR031702
Head
SRR031703
Head
SRR031704
Head
SRR032092
S2
SRR032093
S2
SRR032094
S2
SRR032095
S2-NP
SRR032096
S2-NP
SRR032152
Head
SRR060643
Testis
SRR060644
Ovary
SRR060645
Testis
SRR060646
Ovary
SRR060647
Ovary
SRR060648
Ovary
SRR060649
Ovary
SRR060650
Testis
SRR060651
Ovary
SRR060652
Testis
SRR060653
Ovary
SRR065151
Ovary
SRR065152
Ovary
SRR065153
Ovary
SRR065154
Ovary
SRR065155
Ovary
SRR065800
Ovary
SRR065801
Ovary
SRR065802
Ovary
SRR065803
Ovary
SRR065804
Ovary
SRR065805
Ovary
SRR065806
Ovary
SRR065807
Ovary
SRR097865
S2-NP
SRR097866
S2-NP
SRR097867
S2-NP
SRR298536
Ovary
SRR298537
Ovary
SRR298711
Ovary
SRR298712
Ovary
SRR317110
Ovary
SRR317111
Ovary
SRR317112
Ovary
SRR317113
Ovary
SRR317114
Ovary
SRR317115
Ovary
SRR317116
Ovary
SRR317117
Ovary
SRR341115
S2
SRR341116
S2
SRR341117
S2
SRR341118
S2
SRR351332
Mixed-body
SRR351333
Mixed-body
T004
OSC
T005
CME-L1
V001
Embryo
V002
Embryo
V003
S2
V006
Female-body
V007
Head
V008
S2
V009
CME-L1
V010
ML-DmD20-C5
V011
Sg4
V012
Male-body
V013
Head
V014
DTT
V015
DreRFHV
V018
Kc167
V019
GM2
V020
S2-R+
V021
ML-DmD21
V022
ML-DmD32
V023
Head
V024
Kc167
V025
S2-R+
V026
1182-2H
V027
ML-DmD21
V028
CME-W1-Cl.8+
V029
ML-DmD9
V030
ML-DmD8
V031
GM2
V032
S1
V033
CME-W1-Cl.8+
V034
ML-DmD16-C3
V035
ML-DmD32
V036
ML-DmD20-C5
V037
S2
V038
S2
V063
Ovary
V0632
Ovary
V064
Ovary
V0642
Ovary
V065
Ovary
V0652
Ovary
V066
Ovary
V0662
Ovary
V067
S2-NP
V073
mbn2
V074
S3
V075
ML-DmBG1-C1
V076
ML-DmBG3-C2
V077
Head
V078
Head
V079
Head
V080
Head
V081
Embryo
V082
Embryo
V083
Male-body
V084
Female-body
V085
CME-W2
V086
Female-body
V088
Ovary
V0882
Ovary
V089
Ovary
V0892
Ovary
V090
Male-body
V091
fGS/OSS
V092
Male-body
V093
Male-body
V094
S2-R+
V095
S2-R+
V096
Ovary
V097
Ovary
V098
Ovary
V125
ML-DmD9
V126
CME-L1
V127
G2
V128
S3
V129
ML-DmBG1-C1
V130
ML-DmBG3-C2
V131
ML-DmD16-C3
V132
ML-DmD32
V133
Sg4
V134
ML-DmD8
V135
CME-W2
V136
Male-body
V137
Head
V138
Male-body
V139
Female-body
V140
Female-body
V141
Female-body
V142
Female-body
V144
OSC
V145
S2
V146
S1
V147
1182-2H
V148
mbn2
GSM1528798
follicle cells
..........ATACATGACCGGTCGCGT.............................................................................................................................................................................................................................1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000010000000000000000000001000000000000
.......................CGCGTCTTCCTGCCATGGA...............................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................ACCGGTCGCGTCTTCCTG......................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GAACGAAGGATACATGAC......................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......AGGATACATGACCGGTCGCGTC............................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000110000000
.....GAAGGATACATGACCGGTCGC...............................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........GATACATGACCGGTCGCGTCTTCC........................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000
......................................................................................................................................................................................................................CTCTTTGGCAACTGGAGT.................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........ATACATGACCGGTCGCGTC............................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
................................................................................................................................................................................................................GCGGGACTCTTTGGCAACTGG....................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................AACCGCGGGACTCTTTGGC..........................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
...............................................................................................................................................................................................................CGCGGGACTCTTTGGCAACTGGA...................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.......................CGCGTCTTCCTGCCATGG................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................ACCGGTCGCGTCTTCCTGCCATGGAA..............................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........GGATACATGACCGGTCGC...............................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................ACTCTTTGGCAACTGGAGT.................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.GAACGAAGGATACATGAT......................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................AACTGGAGTTTTAATAAA........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
..........ATACATGACCGGTCGCGTCTTCCTGCCA...................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.................................................................................................................................................................................................................CGGGACTCTTTGGCAACTGGAG..................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
....................GGTCGCGTCTTCCTGCCATG.................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................CCGCGGGACTCTTTGGCAACT......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................GGGACTCTTTGGCAACTGGA...................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......AGGATACATGACCGGTCGCGTCTT..........................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...........................................................................................................................................................................................................AAACCGCGGGACTCTTTGGC..........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................ACCGCGGGACTCTTTGGCAACT......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................CAAAACCGCGGGACTCTTTGG...........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
......................TCGCGTCTTCCTGCCAT..................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................AAACCGCGGGACTCTTTGGCAACT......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...ACGAAGGATACATGACCGGTCGC...............................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.GAACGAAGGATACATGACCG....................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
....CGAAGGATACATGACCGGTCGCGT.............................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.GAACGAAGGATACATGACCGGTC.................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..................CCGGTCGCGTCTTCCTGCC....................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...ACGAAGGATACATGACCGGTCG................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
...................................................................................................................................................................................................................................GGAGTTTTAATAAACTAGAC..2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................AAAACCGCGGGACTCTTTGGCAACTGG....................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
....CGAAGGATACATGACCGGTCGC...............................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..........ATACATGACCGGTCGCGTCTTCC........................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
....................................................................................................................................................................................................................GACTCTTTGGCAACTGGA...................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........GATACATGACCGGTCGCGTC............................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.......................CGCGTCTTCCTGCCATGGC...............................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
.....GAAGGATACATGACCGGTCGCGTC............................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
....................GGTCGCGTCTTCCTGCCATGGAAGTTT..........................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.....GAAGGATACATGACCGGTCGCGTCT...........................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.........GATACATGACCGGTCGCGT.............................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
.........GATACATGACCGGTCGCGTCTTC.........................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.............................................................................................................................................................................................................ACCGCGGGACTCTTTGGC..........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................CTCTTTGGCAACTGGAGTTTTAATA..........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GAAGGATACATGACCGGTCATC..............................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AGAACGAGGGATACATGACCGGTCGCGTTTTCCTGCCCTGGAAGTTTATAGTAAGTAGCTT-------------TG-AAATTATG---CTATATTTGA----AATA------------------------------------------TTACAT----------TTTCACATTTTCAT--------TATTTAACTACAGAACAAAACCGCGGGACTGTTTGGCAACTGGAGCTTTAATAAACTAGACGASizeHit CountTotal NormTotalM023
Head
M024
Male-body
M025
Embryo
M053
Female-body
O001
Testis
O002
Head
SRR553485
Ovary
SRR553486
Ovary
SRR553487
Ovary
SRR553488
Ovary
SRR618934
Ovary
V044
Embryo
SRR902008
Ovary
SRR902009
Testis
SRR1275487
Male larvae
SRR1275485
Male prepupae
SRR1275483
Male prepupae
........................................................................................................................................................................................................................GTTTGGCAACTGGAGCTTTAATAAACT......2712.00200200000000000000
..........ATACATGACCGGTCGCGTTTTCCG.......................................................................................................................................................................................................................2412.00200200000000000000
..............................................................................................................................................................................................................CCGCGGGACTGTTTGGCAACTGG....................2312.00200001000000100000
................................................................................................................................................................................................................GCGGGACTGTTTGGCAACTGGAGCT................2511.00100010000000000000
................................................................................................................................................................................................................GCGGGACTGTTTGGCAACTG.....................2011.00100100000000000000
...........TACATGACCGGTCGCGTTTTCCTG......................................................................................................................................................................................................................2411.00100100000000000000
.....................................................................................................................................................................................................................ACTGTTTGGCAACTGGAGCTTTAAT...........2511.00100100000000000000
......................................................................................................................................................................................................................CTGTTTGGCAACTGGAGCTTTAAT...........2411.00101000000000000000
........................................................................................................................................................................................................................GTTTGGCAACTGGAGCTTTAATAAA........2511.00100100000000000000
...........................................................................................................................................................................................................AAACCGCGGGACTGTTTGGCA.........................2111.00100000000000001000
............................................................................................................................................................................................................AACCGCGGGACTGTTTGGCAA........................2111.00100000000000001000
..............................................................................................................................................................................................................CCGCGGGACTGTTTGGCAACTGGAG..................2511.00100010000000000000
..AACGAGGGATACATGACCGGTCGC...............................................................................................................................................................................................................................2411.00100010000000000000
.......................................................................................................................................................................................................AACAAAACCGCGGGACTGTTTGGC..........................2411.00100010000000000000
.....................GTCGCGTTTTCCTGCCCTGGA...............................................................................................................................................................................................................2111.00100010000000000000
.............................................................................................................................................................................................................ACCGCGGGACTGTTTGGC..........................1811.00100000001000000000
.............CATGACCGGTCGCGTTTTCCTGCCCT..................................................................................................................................................................................................................2611.00100100000000000000
...................CGGTCGCGTTTTCCTGCCCTGGA...............................................................................................................................................................................................................2311.00100001000000000000
.............................................................................................................................................................................................................ACCGCGGGACTGTTTGGCAACTGGAGCTT...............2911.00100100000000000000
..........ATACATGACCGGTCGCGTTTTCCC.......................................................................................................................................................................................................................2411.00100100000000000000
..................................................................................................................................................................................................................GGGACTGTTTGGCAACTGGA...................2011.00100010000000000000
...........................................................................................................................................................................................................................TGGCAACTGGAGCTTTAAT...........1911.00101000000000000000
.......GGGATACATGACCGGTCGCGT.............................................................................................................................................................................................................................2111.00100100000000000000
.....................................................................................................................................................................................................................ACTGTTTGGCAACTGGAGCC................2011.00100100000000000000
.GAACGAGGGATACATGACCGGTC.................................................................................................................................................................................................................................2311.00100100000000000000
....................GGTCGCGTTTTCCTGCCCTGGAA..............................................................................................................................................................................................................2311.00100010000000000000
droSec2
AGAACGAGGGATACATGACCGGTCGCGTTTTCCTGCCCTGGAAGTTTATAGTAAGTAGCTA-------------GG-AAATTATATA-CTTGGATTA---------------------------------------------------CTACAT----------TT--------TCAT--------TATTTAACTACAGAACAAAACCGCGGGACTTTTTGGCAACTGGAGCTTTAATAAACTAGACGASizeHit CountTotal NormTotalM054
Female-body
V113
Male-body
V114
Embryo
V115
Head
..........ATACATGACCGGTCGCGT.............................................................................................................................................................................................................................1812.0020011
..............................................................................................................................................................................................................................CAACTGGAGCTTTAATAAAC.......2011.0010010
...............................................................................................................................................................................................................................AACTGGAGCTTTAATAAACT......2011.0010010
............................................................................................................................................................................................................................GGCAACTGGAGCTTTAATAAA........2111.0010010
...........................................................................................................................................................................................................AAACCGCGGGACTTTTTGGC..........................2011.0011000
....................GGTCGCGTTTTCCTGCCCTGGAAGT............................................................................................................................................................................................................2511.0010010
.......................................................................................................................................................................................................................TTTTTGGCAACTGGAGCTTTA.............2111.0010100
....CGAGGGATACATGACCGGT..................................................................................................................................................................................................................................1911.0010010
.GAACGAGGGATACATGACCGGTCGCGTT............................................................................................................................................................................................................................2811.0010100
...............................................................................................................................................................................................................................AACTGGAGCTTTAATAAACTA.....2111.0011000
.....GAGGGATACATGACCGGTCGCGTTTT..........................................................................................................................................................................................................................2611.0010100
............................................................................................................................................................................................................AACCGCGGGACTTTTTGGCAACTGG....................2511.0010010
...ACGAGGGATACATGACCGGTCGCGT.............................................................................................................................................................................................................................2511.0010100
........GGATACATGACCGGTCGCGT.............................................................................................................................................................................................................................2011.0010100
.....................................................................................................................................................................................................................ACTTTTTGGCAACTGGAGCTTTA.............2311.0010010
.......GGGATACATGACCGGTCGCGTTT...........................................................................................................................................................................................................................2311.0010010
.GAACGAGGGATACATGACC.....................................................................................................................................................................................................................................1911.0010010
......................................................................................................................................................................................................................CTTTTTGGCAACTGGAGCT................1911.0011000
.........................CGTTTTCCTGCCCTGGAAGT............................................................................................................................................................................................................2011.0011000
............ACATGACCGGTCGCGTTTTC.........................................................................................................................................................................................................................2011.0010010
...........TACATGACCGGTCGCGTTTTCCT.......................................................................................................................................................................................................................2311.0010010
..........................GTTTTCCTGCCCTGGAAGT............................................................................................................................................................................................................1911.0010010
.......................CGCGTTTTCCTGCCCTGGA...............................................................................................................................................................................................................1911.0010010
.............................................................................................................................................................................................................ACCGCGGGACTTTTTGGCAACTGG....................2411.0010100
............................................................................................................................................................................................................AACCGCGGGACTTTTTGGCAACT......................2311.0010010
................GACCGGTCGCGTTTTCCT.......................................................................................................................................................................................................................1811.0011000
droYak3
AGAACGAGGGTTACATGACCGGTCGCGTCTTCCTGCCCTGGAAGTTTATAGTAAGTACCTA-------------GG-AATTTTCATGTTTTAATTTA---------------------------------------------------CTTAAT----------TT--------TCAT--------TATTTATCTGTAGAACAAAACCGCCGGACTGTTTGGCAACTGGAGCTTTAATAAACTGGACGASizeHit CountTotal NormTotalM026
Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
GSM1528802
follicle cells
...............TGACCGGTCGCGTCTTCCTGCCCTGGAA..............................................................................................................................................................................................................28121.0021000000000021
...........TACATGACCGGTCGCGTCTTCCTGCCCT..................................................................................................................................................................................................................2812.00201000010000
.........................................................................................................................................................................................................CAAAACCGCCGGACTGTTT.............................1912.00220000000000
...................................................................................................................................................................................................................GGACTGTTTGGCAACTGGAGC.................2112.00201100000000
..........................................................................................................................................................................................................AAAACCGCCGGACTGTTTGG...........................2011.00101000000000
........GGTTACATGACCGGTCGCGT.............................................................................................................................................................................................................................2011.00100000010000
...........TACATGACCGGTCGCGTCTT..........................................................................................................................................................................................................................2011.00100000010000
.....GAGGGTTACATGACCGGTCGCGTC............................................................................................................................................................................................................................2411.00100000010000
................GACCGGTCGCGTCTTCCTGCCCTGGA...............................................................................................................................................................................................................2611.00101000000000
.........GTTACATGACCGGTCGCGTC............................................................................................................................................................................................................................2011.00101000000000
............................................................................................................................................................................................................................GGCAACTGGAGCTTTAATAAACTGGAC..2711.00110000000000
...................................................................................................................................................................................................................................GGAGCTTTAATAAACTGGA...1911.00101000000000
..................CCGGTCGCGTCTTCCTGCCCTGGAA..............................................................................................................................................................................................................2511.00101000000000
..................................................................................................................................................................................................TGTAGAACAAAACCGCCGGACTGTTT.............................2611.00110000000000
...........TACATGACCGGTCGCGTCTTC.........................................................................................................................................................................................................................2111.00101000000000
.......................CGCGTCTTCCTGCCCTGGAAGTTT..........................................................................................................................................................................................................2411.00101000000000
......................................................................................................................................................................................................................................GCTTTAATAAACTGGACGA1911.00101000000000
.........................................................................................................................................................................................................................TTTGGCAACTGGAGCTTTAATAAACTG.....2711.00100000010000
..................CCGGTCGCGTCTTCCTGC.....................................................................................................................................................................................................................1811.00100100000000
...........TACATGACCGGTCGCGTCTTCCTGC.....................................................................................................................................................................................................................2511.00100000010000
..............ATGACCGGTCGCGTCTTCC........................................................................................................................................................................................................................1911.00101000000000
...............................................................................................................................................................................................................................AACTGGAGCTTTAATAAACTGGAC..2411.00110000000000
.......GGGTTACATGACCGGTCGCGTCTT..........................................................................................................................................................................................................................2411.00100000010000
.......................CGCGTCTTCCTGCCCTGGAA..............................................................................................................................................................................................................2011.00101000000000
...................................................................................................................................................................................................................GGACTGTTTGGCAACTGGA...................1911.00101000000000
........GGTTACATGACCGGTCGCGTCTT..........................................................................................................................................................................................................................2311.00100000010000
.......GGGTTACATGACCGGTCGCGTC............................................................................................................................................................................................................................2211.00100000010000
...........TACATGACCGGTCGCGTCTTCCTGCCCTG.................................................................................................................................................................................................................2911.00100000010000
...................CGGTCGCGTCTTCCTGCCCTGGA...............................................................................................................................................................................................................2311.00101000000000
..............................................................................................................................................................................................................................CAACTGGAGCTTTAATAAACTGGAC..2511.00100100000000
..............................................................................................................................................................................................................................CAACTGGAGCTTTAATAAACT......2111.00100000010000
................GACCGGTCGCGTCTTCCTGCCCT..................................................................................................................................................................................................................2311.00110000000000
..........................................................................................................................................................................................................................TTGGCAACTGGAGCTTTAATAAACTGGAC..2911.00110000000000
droEre2
AGAACGAGGGATACATGACCGGTCGCGTCTTCCTACCCTGGAAGTTTATAGTAGGTAGCCA-------------GG-AATTTACATACTCAAGTTTA---------------------------------------------------CTACAT----------TT--------TCAT--------TATCTAACTTCAGAACAAAACCGCTGGACTGTTTGGCAACTGGAGCTTTAACAAGCTAGACGASizeHit CountTotal NormTotalM055
Female-body
M057
Embryo
V060
Head
V040
Embryo
V107
Male-body
V108
Head
GSM1528801
follicle cells
.GAACGAGGGATACATGACCGGT..................................................................................................................................................................................................................................2213.0031000200
...........TACATGACCGGTCGCGTCTTCCTACCCT..................................................................................................................................................................................................................2812.0021000100
......................................................................................................................................................................................................................CTGTTTGGCAACTGGAGCTTTAACAAGC.......2812.0022000000
...........................................................................................................................................................................................................AAACCGCTGGACTGTTTGGC..........................2012.0020101000
.............CATGACCGGTCGCGTCTTCCTACCCTG.................................................................................................................................................................................................................2711.0010100000
........................................................................................................................................................................................................................GTTTGGCAACTGGAGCTTTA.............2011.0010000010
....................GGTCGCGTCTTCCTACCCTGGA...............................................................................................................................................................................................................2211.0011000000
.............CATGACCGGTCGCGTCTTCCTACCCT..................................................................................................................................................................................................................2611.0010000010
...............................................................................................................................................................................................................................AACTGGAGCTTTAACAAGA.......1911.0010000010
.GAACGAGGGATACATGACCGGTCGC...............................................................................................................................................................................................................................2511.0011000000
.........................................................................................................................................................................................................CAAAACCGCTGGACTGTTTGGC..........................2211.0011000000
..............................................................................................................................................................................................................................CAACTGGAGCTTTAACAAG........1911.0011000000
...............................................................................................................................................................................................................................AACTGGAGCTTTAACAAGC.......1911.0010100000
........GGATACATGACCGGTCGCGTCTTC.........................................................................................................................................................................................................................2411.0010000010
...............................................................................................................................................................................................................................AACTGGAGCTTTAACAAGCTAGAC..2411.0010000010
.GAACGAGGGATACATGACCG....................................................................................................................................................................................................................................2011.0010000010
..............ATGACCGGTCGCGTCTTCCTACCCC..................................................................................................................................................................................................................2511.0010100000
...........................................................................................................................................................................................................AAACCGCTGGACTGTTTGGCAACTGGA...................2711.0011000000
...................CGGTCGCGTCTTCCTACCCTG.................................................................................................................................................................................................................2111.0011000000
...........................................................................................................................................................................................................AAACCGCTGGACTGTTTGG...........................1911.0010001000
...........................................................................................................................................................................................................................TGGCAACTGGAGCTTTAACAA.........2111.0010001000
....................................................................................................................................................................................................................GACTGTTTGGCAACTGGAGC.................2011.0010001000
..............ATGACCGGTCGCGTCTTCCTACCCTGGAA..............................................................................................................................................................................................................2911.0010100000
..........ATACATGACCGGTCGCGT.............................................................................................................................................................................................................................1811.0010000010
............................................................................................................................................................................................................AACCGCTGGACTGTTTGGC..........................1911.0010000010
................GACCGGTCGCGTCTTCCTACCCTG.................................................................................................................................................................................................................2411.0011000000
..........................................................................................................................................................................................................AAAACCGCTGGACTGTTTGGCAACTGG....................2711.0010010000
..........................................................................................................................................................................................................................TTGGCAACTGGAGCTTTAACAAGC.......2411.0010100000
.......................CGCGTCTTCCTACCCTGGA...............................................................................................................................................................................................................1911.0010001000
.............CATGACCGGTCGCGTCTTCCTACCCTGGA...............................................................................................................................................................................................................2911.0011000000
.......................CGCGTCTTCCTACCCTGGAAGG............................................................................................................................................................................................................2211.0010001000
................................CTACCCTGGAAGTTTATAAAC....................................................................................................................................................................................................2120.5010000010

Generated: 05/18/2015 at 01:51 AM