ID:

dmo_206

 Coordinate:

scaffold_6328:2897617-2897725 -

 Confidence:

confident

 Class:

Testes-restricted

 Genomic Locale:

intergenic

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-40.3 -40.3 -40.0

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

CCGCTCACAATCGGCAATATCGATTTGGGCGGTCATCGATAGACAATGCGCGCATCTGGTGACTAGCTGTTCCTGAAGTGTCAAATAGTGAGTACTACTCGTAAGAAAATGTACGTTGATTTTTATTTGGCACATCAGTGACAGCATGTCACGAGTAATTGCACAACGACCAGAGCCGATAACGACGGCGATCGCGATTATTGTGCTAT

****************************************************...((.(((((..((((((.((((.(((((((((((...((((...((....))....))))........))))))))))).)))).))))))..))))).))...*************************************************** 		Read size # Mismatch Hit Count Total Norm Total V110

male body		 M046

female body

 M060

embryo

 V056

head

 V049

head

 V041

embryo
...................................................................TGTTCCTGAAGTGTCAAATAGTC....................................................................................................................... 23 1 1 202.00 202 191 5 1 3 2 0
...................................................................TGTTCCTGAAGTGTCAAATAGT........................................................................................................................ 22 0 1 186.00 186 174 5 0 5 1 1
..........................................................................................................................TTATTTGGCACATCAGTGACA.................................................................. 21 0 1 123.00 123 82 26 2 6 7 0
...................................................................TGTTCCTGAAGTGTCAAATAG......................................................................................................................... 21 0 1 88.00 88 79 4 1 4 0 0
...........................................................................................................................TATTTGGCACATCAGTGACAGC................................................................ 22 0 1 45.00 45 23 13 7 0 1 1
................................................................AGCTGTTCCTGAAGTGTCAAAT........................................................................................................................... 22 0 1 37.00 37 35 0 0 1 1 0
................................................................AGCTGTTCCTGAAGTGTCAAA............................................................................................................................ 21 0 1 31.00 31 28 2 0 0 1 0
...........................................................................................................................TATTTGGCACATCAGTGACAG................................................................. 21 0 1 29.00 29 6 20 1 2 0 0
..........................................................................................................................TTATTTGGCACATCAGTGACAG................................................................. 22 0 1 27.00 27 6 19 0 1 1 0
...................................................................TGTTCCTGAAGTGTCAAATAGTCT...................................................................................................................... 24 2 1 27.00 27 27 0 0 0 0 0
..........................................................................................................................TTATTTGGCACATCAGTGACAGC................................................................ 23 0 1 26.00 26 9 5 11 0 0 1
...................................................................TGTTCCTGAAGTGTCAAATAGTG....................................................................................................................... 23 0 1 23.00 23 23 0 0 0 0 0
...........................................................................................................................TATTTGGCACATCAGTGACAGT................................................................ 22 1 1 19.00 19 16 2 0 0 1 0
...................................................................TGTTCCTGAAGTGTCAAATAGTT....................................................................................................................... 23 1 1 18.00 18 18 0 0 0 0 0
..............................................................................................................................TTGGCACATCAGTGACAGCATG............................................................. 22 0 1 16.00 16 10 5 0 1 0 0
...........................................................................................................................TATTTGGCACATCAGTGACAGCT............................................................... 23 1 1 12.00 12 8 3 1 0 0 0
..............................................................................................................................TTGGCACATCAGTGACAGCAT.............................................................. 21 0 1 11.00 11 3 7 1 0 0 0
................................................................AGCTGTTCCTGAAGTGTCAA............................................................................................................................. 20 0 1 10.00 10 9 0 0 1 0 0
...........................................................................................................................TATTTGGCACATCAGTGACA.................................................................. 20 0 1 10.00 10 6 4 0 0 0 0
..............................................................................................................................TTGGCACATCAGTGACAGCATGT............................................................ 23 0 1 9.00 9 9 0 0 0 0 0
..........................................................................................................................TTATTTGGCACATCAGTGACAGT................................................................ 23 1 1 9.00 9 3 5 1 0 0 0
...................................................................TGTTCCTGAAGTGTCAAATA.......................................................................................................................... 20 0 1 8.00 8 8 0 0 0 0 0
................................................................AGCTGTTCCTGAAGTGTCAAATT.......................................................................................................................... 23 1 1 7.00 7 5 0 0 2 0 0
...................................................................TGTTCCTGAAGTGTCAAATAGTTC...................................................................................................................... 24 2 1 6.00 6 4 2 0 0 0 0
................................................................AGCTGTTCCTGAAGTGTCAAATA.......................................................................................................................... 23 0 1 5.00 5 4 1 0 0 0 0
..........................................................................................................................TTATTTGGCACATCAGTGA.................................................................... 19 0 1 5.00 5 4 0 0 1 0 0
.............................................................................................................................TTTGGCACATCAGTGACAGCATG............................................................. 23 0 1 5.00 5 1 4 0 0 0 0
...................................................................TGTTCCTGAAGTGTCAAATAGTGA...................................................................................................................... 24 0 1 4.00 4 4 0 0 0 0 0
................................................................AGCTGTTCCTGAAGTGTCAAATC.......................................................................................................................... 23 1 1 4.00 4 4 0 0 0 0 0
..............................................................................................................................TTGGCACATCAGTGACAGCATGA............................................................ 23 1 1 3.00 3 3 0 0 0 0 0
...................................................................TGTTCCTGAAGTGTCAAATAGTTT...................................................................................................................... 24 2 1 3.00 3 3 0 0 0 0 0
...................................................................TGTTCCTGAAGTGTCAAATAGTGT...................................................................................................................... 24 1 1 3.00 3 3 0 0 0 0 0
................................................................AGCTGTTCCTGAAGTGTCA.............................................................................................................................. 19 0 1 3.00 3 2 0 0 1 0 0
...................................................................TGTTCCTGAAGTGTCAAATAGTCC...................................................................................................................... 24 2 1 3.00 3 2 1 0 0 0 0
................................................................AGCTGTTCCTGAAGTGTCAAATTT......................................................................................................................... 24 2 1 2.00 2 1 1 0 0 0 0
............................................................................................................................ATTTGGCACATCAGTGACA.................................................................. 19 0 1 2.00 2 0 2 0 0 0 0
..........................................................................................................................TGATTTGGCACATCAGTGACA.................................................................. 21 1 1 2.00 2 0 0 2 0 0 0
.................................................................GCTGTTCCTGAAGTGTCAAATA.......................................................................................................................... 22 0 1 2.00 2 2 0 0 0 0 0
............................................................................................................................ATTTGGCACATCAGTGACAGC................................................................ 21 0 1 2.00 2 1 0 1 0 0 0
..........................................................................................................................TTATTTGGCACATCAGTGT.................................................................... 19 1 1 2.00 2 2 0 0 0 0 0
...................................................................TGTTCCTGAAGTGTCAAATATTC....................................................................................................................... 23 2 1 2.00 2 2 0 0 0 0 0
...................................................................TGCTCCTGAAGTGTCAAATAG......................................................................................................................... 21 1 1 2.00 2 2 0 0 0 0 0
...................................................................TGTTCCTGAAGTGTCAAATAGC........................................................................................................................ 22 1 1 2.00 2 2 0 0 0 0 0
.............................................................................................................................TTTGGCACATCAGTGACAGCATGT............................................................ 24 0 1 2.00 2 2 0 0 0 0 0
..........................................................................................................................TTATTTGGCACATCAGTGAC................................................................... 20 0 1 2.00 2 1 1 0 0 0 0
................................................................................................................................GGCACATCAGTGACAGCATG............................................................. 20 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................TTATTTGGCACATTAGTGACA.................................................................. 21 1 1 1.00 1 1 0 0 0 0 0
...................................................................TGTTCCTGAAGCGTCAAATAGT........................................................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
................................................................AGCTGTTCCTTAAGTGTCAAAT........................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
............................................................................................................................ATTTGGCACATCAGTGACAG................................................................. 20 0 1 1.00 1 0 1 0 0 0 0
..................................................................CTGTTCCTGAAGTGTCAAATAG......................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0
................................................................AGCTGTTCCTGAAGTGTCAAC............................................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................TTATTTGGAACATCAGTGACAG................................................................. 22 1 1 1.00 1 1 0 0 0 0 0
...................................................................TGGTCCTGAAGTGTCAAATAGT........................................................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
...................................................................TGTTCCTGAAGTGTCAAATAGTGC...................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0
...................................................................TGTTCCTGAAGTGTCAAATAGTA....................................................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................TGTTTGGCACATCAGTGACAGC................................................................ 22 1 1 1.00 1 0 0 1 0 0 0
...................................................................TGTTCCTGAAGTGTCTAATAGT........................................................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
.............................................ATGCGCGCATCTGGTGACTAGC.............................................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0
.............................................................................................................................TTTGGCAGATCAGTGACAGC................................................................ 20 1 1 1.00 1 1 0 0 0 0 0
...................................................................TGTTCCTGAAGGGTCAAATAGTC....................................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
............................................................................................................................ATTTGGCACATCAGCGACAGC................................................................ 21 1 1 1.00 1 0 1 0 0 0 0
...........................................................................................................................TATTTGGCACATCAGTGACAGCG............................................................... 23 1 1 1.00 1 0 0 0 1 0 0
...................................................................TGTTCCTGAAGTGTCAAATTTT........................................................................................................................ 22 2 1 1.00 1 1 0 0 0 0 0
...................................................................TGTTCCTGAAGTGTCAAGTAGTC....................................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
...................................................................TCTTCCTGAAGTGTCAAATAGTC....................................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
...................................................................TGTTCCTGAAGTGTCAACTAGTC....................................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................TTATTTGGCACATCAGTGACAT................................................................. 22 1 1 1.00 1 0 1 0 0 0 0
..........................................................................................................................TTATTTGGCACATCAGTGACT.................................................................. 21 1 1 1.00 1 0 1 0 0 0 0
..............................................................................................................................TTGGCACATCAGTGACAGCATC............................................................. 22 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................TAATTTGGCACATCAGTGACAG................................................................. 22 1 1 1.00 1 0 0 1 0 0 0
.....................................................................TTCCTGAAGTGTCAAATAGTC....................................................................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
.........................................................................................................................GTTATTTGGCACATCAGTGAC................................................................... 21 1 1 1.00 1 0 1 0 0 0 0
..............................................................................................................................TTGGCACATCAGTGACAGC................................................................ 19 0 1 1.00 1 0 1 0 0 0 0
..............................................................................................................................TGGGCACATCAGTGACAGCATG............................................................. 22 1 1 1.00 1 0 0 1 0 0 0
................................................................AGCTGTTCCTGAAGTGGCAAAT........................................................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
...................................................................TGTTCCTGAAGTGTCAAATAA......................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0 0
.............................................................................................................................TTTGGCACATCAGTGACAGCATGTC........................................................... 25 0 1 1.00 1 1 0 0 0 0 0
....................................................................GTTCCTGAAGTGTCAAATAG......................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0 0
...................................................................TGGTCCTGAAGTGTCAAATAG......................................................................................................................... 21 1 1 1.00 1 0 0 0 0 0 1
.............................................................................................................................TTTGGCACATCAGTGACAGCA............................................................... 21 0 1 1.00 1 0 0 1 0 0 0
..........................................................................................................................TTAGTTGGCACATCAGTGACAGC................................................................ 23 1 1 1.00 1 0 0 1 0 0 0
..............................................................................................................................TTGGCACATCAGTGACAGCATGTTC.......................................................... 25 2 1 1.00 1 1 0 0 0 0 0
...................................................................TGTTCCTGAAGTGCCAAATAGT........................................................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
.............................................................ACTAGCTGTTCCTGAAGTGTCA.............................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0 0
...................................................................TGTTCCTGAAGTGTCAAATAGTCCA..................................................................................................................... 25 3 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................TTATTTGGCACATCCGTGACA.................................................................. 21 1 1 1.00 1 0 0 0 0 1 0
................................................................AGCTGTTCATGAAGTATCAAAT........................................................................................................................... 22 2 1 1.00 1 0 0 0 1 0 0
...........................................................................................................................TATTTGGCACATCAGTGTCAGC................................................................ 22 1 1 1.00 1 0 0 1 0 0 0
................................................................AGCTGTTCCTGAAGTGTCGAAT........................................................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0
...................................................................TGTTCCTGAAGTGTCAAATAGTCG...................................................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0
................................................................AGCTGTTCCTGAAGTGTCAAATCT......................................................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0
................................................................AGATGTTCCTGAAGTGTCAAA............................................................................................................................ 21 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................TATTTGGCACATCAGTGA.................................................................... 18 0 1 1.00 1 0 0 0 1 0 0
..........................................................................................................................TGATTTGGCACATCAGTGACAGT................................................................ 23 2 1 1.00 1 0 0 1 0 0 0
...........................................................................................................................TATTTGGCACATCAGTGAC................................................................... 19 0 1 1.00 1 0 1 0 0 0 0
..............................................................................................................................TTCGCACATCAGTGACAGC................................................................ 19 1 1 1.00 1 0 0 1 0 0 0
.........................................................................................................................TTTATTTGGCACATCAGTGACAGCT............................................................... 25 1 1 1.00 1 1 0 0 0 0 0
...................................................................TGTTCCTGAAGTGTCAAATAGTTCT..................................................................................................................... 25 3 1 1.00 1 1 0 0 0 0 0
.............................................................................................................................TTTGGCACATCAGTGACAGCT............................................................... 21 1 1 1.00 1 0 1 0 0 0 0
...........................................................................................................................TATTTGGCACGTCAGTAACAGC................................................................ 22 2 1 1.00 1 1 0 0 0 0 0
.............................................................................................................................TTTGGCACATCAGTGACAGC................................................................ 20 0 1 1.00 1 0 0 1 0 0 0
..........................................................................................................................CTATTTGGCACATCAGTGACAGC................................................................ 23 1 1 1.00 1 0 0 1 0 0 0
..............................................................................................................................TTGGCACATCAGTGACAGCATGTTT.......................................................... 25 2 1 1.00 1 0 0 0 1 0 0
...........................................................................................................................TATTTGGCACATCAGTGACAGCTT.............................................................. 24 1 1 1.00 1 1 0 0 0 0 0
...................................................................TGTTCCTGAAGTGTCAAATAGTCAA..................................................................................................................... 25 2 1 1.00 1 1 0 0 0 0 0
....................................................................GTTCCTGAAGTGTCAAATAGT........................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0
...................................................................TGTTCCTGAAGTGACAAATAGTC....................................................................................................................... 23 2 1 1.00 1 1 0 0 0 0 0
..............................................TGCGCGCATCTGGTGACTAGC.............................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................TTATTGGGCACATAAGTGACA.................................................................. 21 2 1 1.00 1 0 0 0 1 0 0
...........................................................................................................................TATTTGGCACATCAGTGACAGCTTC............................................................. 25 2 1 1.00 1 1 0 0 0 0 0
................................................................AGCTGTTCCTGAAGTGTCAAATAT......................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0
...................................................................TGTTCCTGAAGTGTCAAATAGTCA...................................................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0
...................................................................TGTTCCTGAAGTGTCAAATAGA........................................................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
...................................................................TGTTCCTGAAGTGTCACATAGTG....................................................................................................................... 23 1 1 1.00 1 0 0 0 0 1 0
...................................................................TGTTCCTGAAGTGTCAAATAGTAAAA.................................................................................................................... 26 3 1 1.00 1 0 0 1 0 0 0
...................................................................TGTTCCTGAAGTGTCAAATAGTCTC..................................................................................................................... 25 3 1 1.00 1 1 0 0 0 0 0
...................................................................TGTTCCCGAAGTGTCAAATAGTCT...................................................................................................................... 24 3 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................TTATTTGGCACATCAGTGACAGCT............................................................... 24 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................TTATTGGCACATCAGTGACAG................................................................. 21 2 2 0.50 1 0 0 0 0 1 0
...................................................................TGTGCCTCAAGCGTCAAATAG......................................................................................................................... 21 3 2 0.50 1 0 0 0 1 0 0
.............................................................................................................................TTTGGCACGTCAGTAACAG................................................................. 19 2 2 0.50 1 0 0 0 0 1 0
..............................................................................................................................................AGCATCTCACTAGTAATG................................................. 18 3 20 0.40 8 0 8 0 0 0 0
..................................................................................................TCGTAAGAAAATGTAACTT............................................................................................ 19 2 7 0.14 1 0 1 0 0 0 0
...........................................................................................................................TATTTGGCAGATTAGTGA.................................................................... 18 2 9 0.11 1 1 0 0 0 0 0

Anti-sense strand reads

GGCGAGTGTTAGCCGTTATAGCTAAACCCGCCAGTAGCTATCTGTTACGCGCGTAGACCACTGATCGACAAGGACTTCACAGTTTATCACTCATGATGAGCATTCTTTTACATGCAACTAAAAATAAACCGTGTAGTCACTGTCGTACAGTGCTCATTAACGTGTTGCTGGTCTCGGCTATTGCTGCCGCTAGCGCTAATAACACGATA

***************************************************...((.(((((..((((((.((((.(((((((((((...((((...((....))....))))........))))))))))).)))).))))))..))))).))...**************************************************** 		Read size # Mismatch Hit Count Total Norm Total V049

head

 M046

female body

 V110

male body
...................................................................................................................................................................................AATGCTCCCGCTAGCGCTTA.......... 20 3 2 0.50 1 1 0 0
........................................................................................................................................................................TGGTCTCGTCTACTGCTGC...................... 19 2 6 0.17 1 0 1 0
..................................................................................................AGCATTCTTTTACATTGAA............................................................................................ 19 2 7 0.14 1 0 1 0
..TGAGTGTTGGCCGTAATA............................................................................................................................................................................................. 18 3 20 0.10 2 0 0 2

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droMoj3 scaffold_6328:2897567-2897775 - dmo_206 confident CCGCTCACAATCGGCAATATCGAT-------------TTGGGCGGTCATCGATAGACAATGCGCGCATCTGGTGACTAGCTGTTCCTGAAGTGTCAAATAGTGAGTACTACTCGTAAGAAAATGTACGTTGATTTTTATTTGGCACATCAGTGACAGCATGTCACGAGTAATTGCACAACGA-CCAGAGCCGATAACGACGGCGATCGCG----------ATTATTGTGCTAT----
droVir3 scaffold_13042:902951-903167 - dvi_45 confident ACGATAACGATA-ACAATAACGAT----------AACTTAAGCGATAA-CGATA-ACGATAAGCGCATCTGGTGACTAGCCGTTCCTGAAGTGTCAAATAGTAGGTACTACTCGTAAGAAAATGTACGTTGATTTTTATTTGGCACATCAGTGACAGCATGTTACGAGTAATTGCACAACAG-CCACAGCCGGAGAC------AGATCCGGAGACAGATGAGTCTTGGATGATAACG
droGri2 scaffold_15081:2041139-2041289 - dgr_20 candidate-rescued ACGC-ACGG----GCAACAGCATTCGTGGCGGGGAATCTGAGTG---------AGCCCGAGGATGCATCTGGTAACTAGCCGTTCCTGTGTAGCCAAATAGTTGGTAGCACG-------------------ATTGTTATTTGGCACATCAGTGACTGCTGGTTAACGGTGAGCGCACAACAA-CC----------------------------------------------------
droWil2 scf2_1100000004909:7960783-7960897 + dwi_143 confident ----------------------------------------------------------------GCGTCTTGTGACGGGCAGTTCCTGAAGTGTCAAATAGTAGAGTACACTGATAA-----------TTAGTATCTATTTGGCACGTCAGTAACAGCCTTTTACAATTAAATGCAAATGCGGCGAGAGC-----------------------------------------------
droAna3 scaffold_13417:2460889-2461001 - dan_75 confident C---------------------------------------------------------------GCGTCCCGTGACGGGCAGTTCCTGAACTGTCAAATAGTGGACGGCATA-------------------AA-CATATTTGGCACGTCAGTAACAGCCTGTTACAAGTCAGCGCACGACCA-GCACTACCGGCCAC----------------------------------------
droBip1 scf7180000395874:32867-33015 - C---------------------------------------------------------------GCGTCCCGTGACGGGCAGTTCCTGAACTGTCAAATAGTGGACGGCATA-------------------AA-CATATTTGGCACGTCAGTAACAGCCTGTTACAAGACAGCGCACGACCA-GCAATACCGGCCACCTCGATGGAAGCGTACAGGGATCACTTTTGGTCGAC----
droKik1 scf7180000302517:1186181-1186284 + ----------------------------------------------------------------GCGTCCCGTGACAGGCAGTTCCTGAAGTGTCAAATAGTGGATGACATG-------------------AG-AATATTTGGCACCCCAGAGACAGCCTGTTACTGGGCAGCGAACGACCC----ATGCCG---------------------------------------------
droEre2 scaffold_4690:10368787-10368850 - ATGGCACCA---------------------------------------------------------------C-----------------------------------------------------------------------------------------------TAACGGGACGACCA-ACGGCACCAATGATGGCGCCGATAGCG----------ATCATACCGACAC----

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
CCGCTCACAATCGGCAATATCGAT-------------TTGGGCGGTCATCGATAGACAATGCGCGCATCTGGTGACTAGCTGTTCCTGAAGTGTCAAATAGTGAGTACTACTCGTAAGAAAATGTACGTTGATTTTTATTTGGCACATCAGTGACAGCATGTCACGAGTAATTGCACAACGA-CCAGAGCCGATAACGACGGCGATCGCG----------ATTATTGTGCTAT----SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
................................................................................TGTTCCTGAAGTGTCAAATAGTC......................................................................................................................................231202.0020250231191
................................................................................TGTTCCTGAAGTGTCAAATAGT.......................................................................................................................................221186.0018651150174
.......................................................................................................................................TTATTTGGCACATCAGTGACA.................................................................................211123.0012326076282
................................................................................TGTTCCTGAAGTGTCAAATAG........................................................................................................................................21188.00884004179
........................................................................................................................................TATTTGGCACATCAGTGACAGC...............................................................................22145.004513110723
.............................................................................AGCTGTTCCTGAAGTGTCAAAT..........................................................................................................................................22137.00370011035
.............................................................................AGCTGTTCCTGAAGTGTCAAA...........................................................................................................................................21131.00312010028
........................................................................................................................................TATTTGGCACATCAGTGACAG................................................................................21129.00292000216
.......................................................................................................................................TTATTTGGCACATCAGTGACAG................................................................................22127.00271901106
................................................................................TGTTCCTGAAGTGTCAAATAGTCT.....................................................................................................................................24127.00270000027
.......................................................................................................................................TTATTTGGCACATCAGTGACAGC...............................................................................23126.00265100119
................................................................................TGTTCCTGAAGTGTCAAATAGTG......................................................................................................................................23123.00230000023
........................................................................................................................................TATTTGGCACATCAGTGACAGT...............................................................................22119.00192010016
................................................................................TGTTCCTGAAGTGTCAAATAGTT......................................................................................................................................23118.00180000018
...........................................................................................................................................TTGGCACATCAGTGACAGCATG............................................................................22116.00165001010
........................................................................................................................................TATTTGGCACATCAGTGACAGCT..............................................................................23112.0012300018
...........................................................................................................................................TTGGCACATCAGTGACAGCAT.............................................................................21111.0011700013
.............................................................................AGCTGTTCCTGAAGTGTCAA............................................................................................................................................20110.0010000109
........................................................................................................................................TATTTGGCACATCAGTGACA.................................................................................20110.0010400006
...........................................................................................................................................TTGGCACATCAGTGACAGCATGT...........................................................................2319.009000009
.......................................................................................................................................TTATTTGGCACATCAGTGACAGT...............................................................................2319.009500013
................................................................................TGTTCCTGAAGTGTCAAATA.........................................................................................................................................2018.008000008
.............................................................................AGCTGTTCCTGAAGTGTCAAATT.........................................................................................................................................2317.007000205
................................................................................TGTTCCTGAAGTGTCAAATAGTTC.....................................................................................................................................2416.006200004
.............................................................................AGCTGTTCCTGAAGTGTCAAATA.........................................................................................................................................2315.005100004
.......................................................................................................................................TTATTTGGCACATCAGTGA...................................................................................1915.005000104
..........................................................................................................................................TTTGGCACATCAGTGACAGCATG............................................................................2315.005400001
................................................................................TGTTCCTGAAGTGTCAAATAGTGA.....................................................................................................................................2414.004000004
.............................................................................AGCTGTTCCTGAAGTGTCAAATC.........................................................................................................................................2314.004000004
...........................................................................................................................................TTGGCACATCAGTGACAGCATGA...........................................................................2313.003000003
................................................................................TGTTCCTGAAGTGTCAAATAGTTT.....................................................................................................................................2413.003000003
................................................................................TGTTCCTGAAGTGTCAAATAGTGT.....................................................................................................................................2413.003000003
.............................................................................AGCTGTTCCTGAAGTGTCA.............................................................................................................................................1913.003000102
................................................................................TGTTCCTGAAGTGTCAAATAGTCC.....................................................................................................................................2413.003100002
.............................................................................AGCTGTTCCTGAAGTGTCAAATTT........................................................................................................................................2412.002100001
.........................................................................................................................................ATTTGGCACATCAGTGACA.................................................................................1912.002200000
..............................................................................GCTGTTCCTGAAGTGTCAAATA.........................................................................................................................................2212.002000002
.........................................................................................................................................ATTTGGCACATCAGTGACAGC...............................................................................2112.002000011
.......................................................................................................................................TTATTTGGCACATCAGTGT...................................................................................1912.002000002
................................................................................TGTTCCTGAAGTGTCAAATAGC.......................................................................................................................................2212.002000002
..........................................................................................................................................TTTGGCACATCAGTGACAGCATGT...........................................................................2412.002000002
.......................................................................................................................................TTATTTGGCACATCAGTGAC..................................................................................2012.002100001
.............................................................................................................................................GGCACATCAGTGACAGCATG............................................................................2011.001000001
.........................................................................................................................................ATTTGGCACATCAGTGACAG................................................................................2011.001100000
...............................................................................CTGTTCCTGAAGTGTCAAATAG........................................................................................................................................2211.001000001
.............................................................................AGCTGTTCCTGAAGTGTCAAC...........................................................................................................................................2111.001000001
................................................................................TGTTCCTGAAGTGTCAAATAGTGC.....................................................................................................................................2411.001000001
................................................................................TGTTCCTGAAGTGTCAAATAGTA......................................................................................................................................2311.001000001
..........................................................ATGCGCGCATCTGGTGACTAGC.............................................................................................................................................................2211.001000001
........................................................................................................................................TATTTGGCACATCAGTGACAGCG..............................................................................2311.001000100
.......................................................................................................................................TTATTTGGCACATCAGTGACAT................................................................................2211.001100000
.......................................................................................................................................TTATTTGGCACATCAGTGACT.................................................................................2111.001100000
...........................................................................................................................................TTGGCACATCAGTGACAGCATC............................................................................2211.001000001
..................................................................................TTCCTGAAGTGTCAAATAGTC......................................................................................................................................2111.001100000
...........................................................................................................................................TTGGCACATCAGTGACAGC...............................................................................1911.001100000
................................................................................TGTTCCTGAAGTGTCAAATAA........................................................................................................................................2111.001000001
..........................................................................................................................................TTTGGCACATCAGTGACAGCATGTC..........................................................................2511.001000001
.................................................................................GTTCCTGAAGTGTCAAATAG........................................................................................................................................2011.001100000
..........................................................................................................................................TTTGGCACATCAGTGACAGCA..............................................................................2111.001000010
...........................................................................................................................................TTGGCACATCAGTGACAGCATGTTC.........................................................................2511.001000001
..........................................................................ACTAGCTGTTCCTGAAGTGTCA.............................................................................................................................................2211.001000001
................................................................................TGTTCCTGAAGTGTCAAATAGTCCA....................................................................................................................................2511.001000001
................................................................................TGTTCCTGAAGTGTCAAATAGTCG.....................................................................................................................................2411.001000001
.............................................................................AGCTGTTCCTGAAGTGTCAAATCT........................................................................................................................................2411.001000001
........................................................................................................................................TATTTGGCACATCAGTGA...................................................................................1811.001000100
........................................................................................................................................TATTTGGCACATCAGTGAC..................................................................................1911.001100000
......................................................................................................................................TTTATTTGGCACATCAGTGACAGCT..............................................................................2511.001000001
................................................................................TGTTCCTGAAGTGTCAAATAGTTCT....................................................................................................................................2511.001000001
..........................................................................................................................................TTTGGCACATCAGTGACAGCT..............................................................................2111.001100000
..........................................................................................................................................TTTGGCACATCAGTGACAGC...............................................................................2011.001000010
...........................................................................................................................................TTGGCACATCAGTGACAGCATGTTT.........................................................................2511.001000100
.................................................................................GTTCCTGAAGTGTCAAATAGT.......................................................................................................................................2111.001100000
...........................................................TGCGCGCATCTGGTGACTAGC.............................................................................................................................................................2111.001000001
.............................................................................AGCTGTTCCTGAAGTGTCAAATAT........................................................................................................................................2411.001000001
................................................................................TGTTCCTGAAGTGTCAAATAGA.......................................................................................................................................2211.001000001
................................................................................TGTTCCTGAAGTGTCAAATAGTCTC....................................................................................................................................2511.001000001
.......................................................................................................................................TTATTTGGCACATCAGTGACAGCT..............................................................................2411.001000001
droVir3
ACGATAACGATA-ACAATAACGAT----------AACTTAAGCGATAA-CGATA-ACGATAAGCGCATCTGGTGACTAGCCGTTCCTGAAGTGTCAAATAGTAGGTACTACTCGTAAGAAAATGTACGTTGATTTTTATTTGGCACATCAGTGACAGCATGTTACGAGTAATTGCACAACAG-CCACAGCCGGAGAC------AGATCCGGAGACAGATGAGTCTTGGATGATAACGSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
.............................................................................AGCCGTTCCTGAAGTGTCAAAT..........................................................................................................................................22123787.002378722020061638221777778000050112027343143335476737741469501021480201212144500000000000000000000037501302212110000000
.......................................................................................................................................TTATTTGGCACATCAGTGACAG................................................................................2219527.00952750261073160400002000601342032322263520969113145014901100291000000000000000000000201500074320200000
...........................................................................................................................................TTGGCACATCAGTGACAGCAT.............................................................................2119320.009320001514435421043000001001074641622012320151578022670432100016990000000000000000000001600010000100000000
.............................................................................AGCCGTTCCTGAAGTGTCAA............................................................................................................................................2018282.008282508036881169023000000000101122312101312781403559152606850100457300000000000000000000010200000000000300000
.............................................................................AGCCGTTCCTGAAGTGTCAAA...........................................................................................................................................2116981.006981190603655815454790000000110744207001211261028401121304930000347600000000000000000100014900100003000000000
...........................................................................................................................................TTGGCACATCAGTGACAGCATG............................................................................2216401.00640140100013641602900000000103741114005187510545061927017820001259000000000000000000000600000011320000000
...........................................................................................................................................TTGGCACATCAGTGACAGCA..............................................................................2015694.00569400270012713303500001000002142010000137312995851596018310001214000000000000000000000100000000000000000
........................................................................................................................................TATTTGGCACATCAGTGACAG................................................................................2115203.00520371140047031900000000201341020132135411475281585011701010232000000000000000000000301011020101100000
........................................................................................................................................TATTTGGCACATCAGTGACAGC...............................................................................2214796.00479600151026010013000030000013500000001464943416155706402000130000000000000000000000901011110000002100
.......................................................................................................................................TTATTTGGCACATCAGTGACAGC...............................................................................2313770.0037703031116060400001000001064000000133566132411571460000089000000000000000002000700000030000000000
................................................................................CGTTCCTGAAGTGTCAAATAGTC......................................................................................................................................2312864.00286420200131001113000000001034000110015624711605720221000012140000000000000000010006900000000000000000
.......................................................................................................................................TTATTTGGCACATCAGTGACA.................................................................................2112351.002351101401300607000010001155100012167052821961614600000141000000000000000000000600200000000000000
.............................................................................AGCCGTTCCTGAAGTGTCA.............................................................................................................................................1911480.001480006001292401650000000000147002001020925886261015200001940000000000000000000002600000000000000000
..........................................................................................................................................TTTGGCACATCAGTGACAGCA..............................................................................211992.009920020129070500000000003830111003321921301470411001059000000000000000000000100000000000000000
.............................................................................AGCCGTTCCTGAAGTGTCAAATT.........................................................................................................................................231771.00771000015702716200000000017800000001221085714005400000460000000000000000000001700000000000000000
.............................................................................AGCCGTTCCTGAAGTGTCAAATA.........................................................................................................................................231703.0070300200260901900000000009700000121211015515705211000400000000000000000000001500300001000000000
................................................................................CGTTCCTGAAGTGTCAAATAGT.......................................................................................................................................221691.00691004122404512800000000003910000022221323211101100000220000000000000000000011200001000000000000
.............................................................................AGCCGTTCCTGAAGTGTCAAATC.........................................................................................................................................231681.00681602006110070000000000860000000941035614803700000290000000000000000000005100000000000000000
..........................................................................................................................................TTTGGCACATCAGTGACAGCAT.............................................................................221678.00678002002311050000000000370000102147106372580200000037000000000000000000000100000000000000000
........................................................................................................................................TATTTGGCACATCAGTGACA.................................................................................201661.00661003001901030000000000200000000146168451610380000054000000000000000000000300000000000000000
..........................................................................................................................................TTTGGCACATCAGTGACAGCATG............................................................................231609.00609000001500020000000000470000101149106361900200000040000000000000000000000100000001000000000
...........................................................................................................................................TTGGCACATCAGTGACAGC...............................................................................191594.00594003011306040000000000221100000162138491650140000014000000000000000001000000000000000000000
...........................................................................................................................................TTGGCACATCAGTGACAGCATGT...........................................................................231520.0052000000131303000000000038000001014981201570180000035000000000000000000000100000000000000000
...........................................................................................................................................TTGGCACATCAGTGACAGCATC............................................................................221504.005040010037100100000000007500000015646431070520000082000000000000000000000200000000000000000
................................................................................CGTTCCTGAAGTGTCAAATAG........................................................................................................................................211479.00479101003309022000000000042000010010797218402300000280000000000000000000001000000000000000000
........................................................................................................................................TATTTGGCACATCAGTGACAGCT..............................................................................231371.00371000001200020000000000250000000736220920310000052000000000000000000000200000000000000000
................................................................................CGTTCCTGAAGTGTCAAATAGTCC.....................................................................................................................................241336.0033610001200001200000000005600000013929216003910000440000000000000000000001200000000000000000
................................................................................CGTTCCTGAAGTGTCAAATAGTA......................................................................................................................................231330.003301000018060110000000000410000000845113550210000022000000000000000000000600000010000000000
........................................................................................................................................TATTTGGCACATCAGTGACAGT...............................................................................221304.00304000001704040000000000170000100585519720220000034000000000000000000000001000000000000000
.......................................................................................................................................TTATTTGGCACATCAGTGACAGT...............................................................................231232.00232000001101010000000000250000000553011440170000035000000000000000000000200000000000000000
................................................................................CGTTCCTGAAGTGTCAAATAGTCT.....................................................................................................................................241191.00191000008000201000000000180000000372719270150000012000000000000000000000700000000000000000
.......................................................................................................................................TTATTTGGCACATCAGTGACAGCT..............................................................................241186.001860000060001000000000013000000035259490160000032000000000000000000000000000000000000000
...........................................................................................................................................TTGGCACATCAGTGACAGCATT............................................................................221183.0018300000300000000000000500000006226136007000007000000000000000000000000000000000000000
........................................................................................................................................TATTTGGCACATCAGTGACAGCC..............................................................................231175.0017500100200000000000000300000005729185702000005000000000000000000000000000000010000000
..........................................................................................................................................TTTGGCACATCAGTGACAGC...............................................................................201163.00163001001000000000000001110000006142162003000006000000000000000000000000001000000000000
.............................................................................AGCCGTTCCTGAAGTGTCAAATCT........................................................................................................................................241144.001440000013000400000000002900000001821626080000016000000000000000000000300000000000000000
.............................................................................AGCCGTTCCTGAAGTGTC..............................................................................................................................................181129.0012900000230240320000000000140000000353809000008000000000000000000000000000000000000000
.......................................................................................................................................TTATTTGGCACATCAGTGAC..................................................................................201125.0012500000000000000000000500000003728113600000004000000000000000002000000000010100000000
.............................................................................AGCCGTTCCTGAAGTGTCAAATCC........................................................................................................................................241108.0010810101700000000000000270000000541515015000019000000000000000000000700000000000000000
.............................................................................AGCCGTTCCTGAAGTGTCC.............................................................................................................................................191105.001050000012000150000000000150000000767160130000012000000000000000000000200000000000000000
.............................................................................AGCCGTTCCTGAAGTGTCAAAA..........................................................................................................................................221100.0010000001703040000000000120000000161362307000003000000000000000000000500000000000000000
........................................................................................................................................TATTTGGCACATCAGTGACAGCA..............................................................................23185.00850000000000000000000020000000371662200000002000000000000000000000000000000000000000
................................................................................CGTTCCTGAAGTGTCAAATA.........................................................................................................................................20175.0075000009050700000000004000000099111040000012000000000000000000000400000000000000000
.............................................................................AGCCGTTCCTGAAGTGTCAC............................................................................................................................................20171.00710000017000000000000003200000000000019000003000000000000000000000000000000000000000
...........................................................................................................................................TTGGCACATCAGTGACAGCATGTC..........................................................................24169.00690000031001000000000060000000125716010000017000000000000000000000000000000000000000
...........................................................................................................................................TTGGCACATCAGTGACAGCATGTCC.........................................................................25167.006700000100000000000000300000001110122501000002000000000000000000000200000000000000000
.............................................................................AGCCGTTCCTGAAGTGTCAAATTT........................................................................................................................................24166.0066000009000600000000003000000014831705000001000000000000000000000000000000000000000
..........................................................................................................................................TTTGGCACATCAGTGACAGCATC............................................................................23165.006500000600000000000000800000006242605000008000000000000000000000000000000000000000
.............................................................................AGCCGTTCCTGAAGTGTCAAC...........................................................................................................................................21165.0065200007010000000000002300000003015016000006000000000000000000000100000000000000000
.......................................................................................................................................TTATTTGGCACATCAGTGA...................................................................................19164.0064000000010000000000005000000017144905000008000000000000000000000000000010000000000
...........................................................................................................................................TTGGCACATCAGTGACAGCC..............................................................................20148.004800100700000000000000700000002711007000006000000000000000000000000000000000000000
..........................................................................................................................................TTTGGCACATCAGTGACAG................................................................................19148.0048000000000000000000002000000016144802000002000000000000000000000000000000000000000
..........................................................................................................................................TTTGGCACATCAGTGACAGCATGT...........................................................................24147.0047000001000000000000003001000071112201000000000000000000000000000000000000000000000
.......................................................................................................................................TTATTTGGCACATCAGTGACAGCC..............................................................................24146.0046000000000000000000002000000018551300000003000000000000000000000000000000000000000
........................................................................................................................................TATTTGGCACATCAGTGACAGTC..............................................................................23144.004400000200000000000000400000002741304000008000000000000000000000000000000000000000
..........................................................................................................................................TTTGGCACATCAGTGACAGCT..............................................................................21143.0043000005010000000000003000000012221100000007000000000000000000000000000000000000000
.............................................................................AGCCGTTCCTGAAGTGTCAAATAA........................................................................................................................................24141.004100000100000000000000600000008631201000003000000000000000000000100000000000000000
.......................................................................................................................................TTATTTGGCACATCAGTGACAGCA..............................................................................24139.0039000000010000000000002000000012921102000000000000000000000000000000000000000000000
................................................................................CGTTCCTGAAGTGTCAAATAGTCA.....................................................................................................................................24139.00390000010006000000000010001000684504000001000000000000000000000200000000000000000
............................................................................TAGCCGTTCCTGAAGTGTCAA............................................................................................................................................21137.003700000601000000000000400000004431004000001000000000000000000000000000000000000000
...........................................................................................................................................TTGGCACATCAGTGACAGCATGA...........................................................................23136.003600000000000000000000300000001151801000105000000000000000000000100000000000000000
..........................................................................................................................................TTTGGCACATCAGTGACAGCC..............................................................................21135.003500000100000000000000400000009241201000002000000000000000000000000000000000000000
................................................................................CGTTCCTGAAGTGTCAAATAGTT......................................................................................................................................23134.003400000002020000000000100000009100500000003000000000000000000000200000000000000000
................................................................................CGTTCCTGAAGTGTCAAAT..........................................................................................................................................19132.00320000020012000000000090000000440602000002000000000000000000000000000000000000000
...........................................................................................................................................TTGGCACATCAGTGACAGCATCC...........................................................................23132.00320000020000000000000070000000214806000002000000000000000000000000000000000000000
.......................................................................................................................................TTATTTGGCACATCAGTGACAGTC..............................................................................24131.00310000010000000000000030000000634805000001000000000000000000000000000000000000000
................................................................................CGTTCCTGAAGTGTCAAATAGTTC.....................................................................................................................................24131.00310000010000000000000000000000683603000003000000000000000000000100000000000000000
...........................................................................................................................................TTGGCACATCAGTGACAGCATGTCCT........................................................................26128.002800000100000000000000100000004231301000003000000000000000000000000000000000000000
.............................................................................AGCCGTTCCTGAAGTGTCAAT...........................................................................................................................................21127.00270000020000000000000090000000341402000002000000000000000000000000000000000000000
...........................................................................................................................................TTGGCACATCAGTGACAGCT..............................................................................20126.00260000030001000000000000000000664300000003000000000000000000000000000000000000000
.........................................................................................................................................ATTTGGCACATCAGTGACAG................................................................................20124.002400500000000000000000000000001031500000000000000000000000000000000000000000000000
........................................................................................................................................TATTTGGCACATCAGTGACAGCTC.............................................................................24124.00240000040000000000000030000000533400000002000000000000000000000000000000000000000
...........................................................................................................................................TTGGCACATCAGTGACAGCATTC...........................................................................23122.00220000000000000000000000000000484600000000000000000000000000000000000000000000000
.............................................................................AGCCGTTCCTGAAGTGTCAAAC..........................................................................................................................................22121.00210000020002000000000030000000301603000000000000000000000000000100000000000000000
......................................................................................................................................TTTATTTGGCACATCAGTGACAG................................................................................23119.00190000000000000000000000000000473500000000000000000000000000000000000000000000000
.......................................................................................................................................TTATTTGGCACATCAGTGACAGA...............................................................................23118.00180000000000000000000000000000362500000002000000000000000000000000000000000000000
...........................................................................................................................................TTGGCACATCAGTGACAGCAC.............................................................................21118.00180000020100000000000050000000201200000005000000000000000000000000000000000000000
...........................................................................................................................................TTGGCACATCAGTGACAG................................................................................18118.00180000010001000000000000000000362500000000000000000000000000000000000000000000000
...........................................................................................................................................TTGGCACATCAGTGACAGCATGTT..........................................................................24118.00180000000000000000000010000000912300000002000000000000000000000000000000000000000
.............................................................................AGCCGTTCCTGAAGTGTCAAATAT........................................................................................................................................24117.00170000000000000000000010000000234500000002000000000000000000000000000000000000000
...........................................................................................................................................TTGGCACATCAGTGACAGCATGTTC.........................................................................25117.00170000030001000000000000000000530400000001000000000000000000000000000000000000000
.........................................................................................................................................ATTTGGCACATCAGTGACAGC...............................................................................21117.00170010000000000000000000000000541600000000000000000000000000000000000000000000000
.............................................................................AGCCGTTCCTGAAGTGTCAAATTC........................................................................................................................................24116.00160000050000000000000010000000211301000001000000000000000000000100000000000000000
......................................................................................................................................TTTATTTGGCACATCAGTGACAGC...............................................................................24116.00160000000000000000000000000010511700000001000000000000000000000000000000000000000
..........................................................................................................................................TTTGGCACATCAGTGACAGCTC.............................................................................22116.00160000010000000000000030000000403101000003000000000000000000000000000000000000000
..........................................................................................................................................TTTGGCACATCAGTGACAGCATT............................................................................23115.00150000000000000000000000000000332501000001000000000000000000000000000000000000000
...........................................................................................................................................TTGGCACATCAGTGACAGT...............................................................................19114.00140000020202000000000020000000021001000002000000000000000000000000000000000000000
...........................................................................................................................................TTGGCACATCAGTGACAGCATGTCT.........................................................................25114.00140000000000000000000000000000232700000000000000000000000000000000000000000000000
........................................................................................................................................TATTTGGCACATCAGTGACAGA...............................................................................22112.00120000000000000000000010000000720200000000000000000000000000000000000000000000000
............................................................................TAGCCGTTCCTGAAGTGTCAAA...........................................................................................................................................22112.00120000000001000000000010000000421101000001000000000000000000000000000000000000000
..........................................................................................................................................TTTGGCACATCAGTGACAGCATGTCC.........................................................................26112.00120000000000000000000000000000221502000000000000000000000000000000000000000000000
.................................................................................GTTCCTGAAGTGTCAAAT..........................................................................................................................................18112.00120000000100000000000030000000220202000000000000000000000000000000000000000000000
........................................................................................................................................TATTTGGCACATCAGTGAC..................................................................................19111.00110000010000000000000000000000321300000001000000000000000000000000000000000000000
............................................................................TAGCCGTTCCTGAAGTGTCAAAT..........................................................................................................................................23111.00110000000000000000000000000000121500000002000000000000000000000000000000000000000
...............................................................................CCGTTCCTGAAGTGTCAAAT..........................................................................................................................................20111.00110000000000000000000020000000321200000001000000000000000000000000000000000000000
.............................................................................AGCCGTTCCTGAAGTGTCT.............................................................................................................................................19110.00100000020105000000000000000000000000000002000000000000000000000000000000000000000
..........................................................................................................................................TTTGGCACATCAGTGACAGCAA.............................................................................22110.00100000000000000000000000000100122300000001000000000000000000000000000000000000000
................................................................................CGTTCCTGAAGTGTCAAA...........................................................................................................................................18110.00100000100103000000000000000000020101000001000000000000000000000000000000000000000
........................................................................................................................................TATTTGGCACATCAGTGA...................................................................................18110.00100000000000000000000000000000010303000003000000000000000000000000000000000000000
...........................................................................................................................................TTGGCACATCAGTGACAGCATA............................................................................22110.00100000000000000000000010000000410200000002000000000000000000000000000000000000000
...............................................................................CCGTTCCTGAAGTGTCAAATA.........................................................................................................................................21110.00100000020001000000000010000000101300000000000000000000000000000100000000000000000
.......................................................................................................................................TTATTTGGCACATCAGTGACC.................................................................................2119.0090000000000000000000000000000210300000000000000000000000000000000300000000000000
.............................................................................AGCCGTTCCTGAAGTGTCAAG...........................................................................................................................................2119.0090000020001000000000020000000210001000000000000000000000000000000000000000000000
.......................................................................................................................................TTATTTGGCACATCAGTGACAGCTC.............................................................................2519.0090000000000000000000010000000300202000001000000000000000000000000000000000000000
........................................................................................................................................TATTTGGCACATCAGTGACAGTT..............................................................................2319.0090000000000000000000000000000420100000002000000000000000000000000000000000000000
..........................................................................................................................................TTTGGCACATCAGTGACAGT...............................................................................2019.0090000030000000000000000000000200101000002000000000000000000000000000000000000000
..............................................................................GCCGTTCCTGAAGTGTCAAAT..........................................................................................................................................2119.0090000010000000000000020000000310200000000000000000000000000000000000000000000000
.................................................................................GTTCCTGAAGTGTCAAATAGTC......................................................................................................................................2218.0080010010000000000000020000000220000000000000000000000000000000000000000000000000
................................................................................CGTTCCTGAAGTGTCAAATC.........................................................................................................................................2018.0080000110001000000000000000000103000000001000000000000000000000000000000000000000
.......................................................................................................................................TTATTTGGCACATCAGTGACAGCAT.............................................................................2517.0070000000000000000000000000000012400000000000000000000000000000000000000000000000
..........................................................................................................................................TTTGGCACATCAGTGACA.................................................................................1817.0070000010000000000000030000000210000000000000000000000000000000000000000000000000
.............................................................................AGCCGTTCCTGAAGTGTCAAATCA........................................................................................................................................2417.0070000000000000000000010000000100400000001000000000000000000000000000000000000000
.......................................................................................................................................TTATTTGGCACATCAGTGT...................................................................................1917.0070000020000000000000000000000020201000000000000000000000000000000000000000000000
........................................................................................................................................TATTTGGCACATCAGTGACAGTTC.............................................................................2417.0070000000000000000000000000000321100000000000000000000000000000000000000000000000
.............................................................................AGCCGTTCCTGAAGTGTCATC...........................................................................................................................................2116.0060000000002000000000010000000002000000000000000000000000000000100000000000000000
..........................................................................................................................................TTTGGCACATCAGTGACAGCATGA...........................................................................2416.0060000000000000000000000000000031200000000000000000000000000000000000000000000000
.......................................................................................................................................TTATTTGGCACATCAGTGACAT................................................................................2216.0060000000000000000000010000000110201000000000000000000000000000000000000000000000
......................................................................................................................................TTTATTTGGCACATCAGTGACA.................................................................................2216.0060000000000000000000000000000200301000000000000000000000000000000000000000000000
.............................................................................AGCCGTTCCTGAAGTGTCCC............................................................................................................................................2016.0060000010001000000000020000000000000000002000000000000000000000000000000000000000
.............................................................................AGCCGTTCCTGAAGTGTCAG............................................................................................................................................2016.0060000010000000000000020000000000101000001000000000000000000000000000000000000000
.......................................................................................................................................TTATTTGGCACATCAGTG....................................................................................1816.0060000000000000000000010000000130001000000000000000000000000000000000000000000000
..............................................................................................................................................GCACATCAGTGACAGCATG............................................................................1915.0050000000000000000000000000000020000000003000000000000000000000000000000000000000
...........................................................................................................................................TTGGCACATCAGTGACAGCAA.............................................................................2115.0050000010000000000000020000000101000000000000000000000000000000000000000000000000
.............................................................................AGCCGTTCCTGAAGTGTCAATC..........................................................................................................................................2215.0050000000000000000000020000000000201000000000000000000000000000000000000000000000
............................................................................TAGCCGTTCCTGAAGTGTCA.............................................................................................................................................2015.0050000000000000000000010000000010102000000000000000000000000000000000000000000000
.............................................................................................................................................GGCACATCAGTGACAGCATG............................................................................2015.0050000000000000000000000000000210200000000000000000000000000000000000000000000000
.............................................................AGCGCATCTGGTGACTAGC.............................................................................................................................................................1915.0051000000000000000000000000000010201000000000000000000000000000000000000000000000
droGri2
ACGC-ACGG----GCAACAGCATTCGTGGCGGGGAATCTGAGTG---------AGCCCGAGGATGCATCTGGTAACTAGCCGTTCCTGTGTAGCCAAATAGTTGGTAGCACG-------------------ATTGTTATTTGGCACATCAGTGACTGCTGGTTAACGGTGAGCGCACAACAA-CC----------------------------------------------------SizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
..........................................................................................................................................TTTGGCACATCAGTGACTGCTGG............................................................................2317.00707
............................................................................................................................................TGGCACATCAGTGACTGCTGGT...........................................................................2214.00404
...........................................................................................................................................TTGGCACATCAGTGACTGCTGG............................................................................2213.00303
..........................................................................................................................................TTTGGCACATCAGTGACTGCTG.............................................................................2211.00101
.............................................................................AGCCGTTCCTGTGTAGCCAAATA.........................................................................................................................................2311.00101
...........................................................................................................................................TTGGCACATCAGTGACTGCTGGT...........................................................................2311.00101
..........................................................................................................................................TTTGGCACATCAGTGACTG................................................................................1911.00101
.............................................................................AGCCGTTCCTGTGTAGCCAAAT..........................................................................................................................................2211.00101
...........................................................................................................................................TTGGCACATCAGTGACTGCTGGTT..........................................................................2411.00101
droWil2
----------------------------------------------------------------GCGTCTTGTGACGGGCAGTTCCTGAAGTGTCAAATAGTAGAGTACACTGATAA-----------TTAGTATCTATTTGGCACGTCAGTAACAGCCTTTTACAATTAAATGCAAATGCGGCGAGAGC-----------------------------------------------SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
................................................................................AGTTCCTGAAGTGTCAAATAGT.......................................................................................................................................22164.0064115804
....................................................................................................................................TATCTATTTGGCACGTCAGTAA...................................................................................22162.0062205730
........................................................................................................................................TATTTGGCACGTCAGTAACAG................................................................................21147.0047503705
................................................................................AGTTCCTGAAGTGTCAAATAG........................................................................................................................................21135.0035103013
........................................................................................................................................TATTTGGCACGTCAGTAACAGC...............................................................................22132.0032002813
..........................................................................................................................................TTTGGCACGTCAGTAACAGCCT.............................................................................22122.0022120802
...............................................................................CAGTTCCTGAAGTGTCAAATA.........................................................................................................................................21114.0014001301
....................................................................................................................................TATCTATTTGGCACGTCAGTA....................................................................................21112.0012001200
........................................................................................................................................TATTTGGCACGTCAGTAACA.................................................................................20110.001000910
..........................................................................................................................................TTTGGCACGTCAGTAACAGCCTT............................................................................23110.001001900
...........................................................................................................................................TTGGCACGTCAGTAACAGCCTT............................................................................2219.00901710
...............................................................................CAGTTCCTGAAGTGTCAAAT..........................................................................................................................................2018.00800800
...................................................................................TCCTGAAGTGTCAAATAGTAGAGT..................................................................................................................................2418.00800710
...........................................................................................................................................TTGGCACGTCAGTAACAGCCT.............................................................................2116.00640200
..........................................................................................................................................TTTGGCACGTCAGTAACAGC...............................................................................2016.00600402
................................................................................AGTTCCTGAAGTGTCAAATA.........................................................................................................................................2015.00500500
....................................................................................................GTAGAGTACACTGATAA-----------TTAGTATCTA...................................................................................................2714.00440000
....................................................................................................................................TATCTATTTGGCACGTCAGT.....................................................................................2014.00400301
........................................................................................................................................TATTTGGCACGTCAGTAACAGT...............................................................................2214.00400400
..........................................................................................................................................TTTGGCACGTCAGTAACAGCC..............................................................................2114.00420200
.............................................................................GGCAGTTCCTGAAGTGTCAAAT..........................................................................................................................................2213.00300300
...................................................................................TCCTGAAGTGTCAAATAGTAGA....................................................................................................................................2213.00300300
.....................................................................................................................................ATCTATTTGGCACGTCAGTAAC..................................................................................2212.00200200
.............................................................................GGCAGTTCCTGAAGTGTCA.............................................................................................................................................1912.00200200
...................................................................................TCCTGAAGTGTCAAATAGTAGAG...................................................................................................................................2312.00200200
..........................................................................................................................................TTTGGCACGTCAGTAACAGCCC.............................................................................2212.00220000
......................................................................................................................................TCTATTTGGCACGTCAGTAACAG................................................................................2312.00200200
....................................................................................CCTGAAGTGTCAAATAGTAGAG...................................................................................................................................2211.00100100
..........................................................................................................................................TTTGGCACGTCAGTAACAGCCG.............................................................................2211.00110000
........................................................................................................................................TATTTGGCACGTCAGTAACAGCA..............................................................................2311.00100100
................................................................................AGTTCCTGAAGTGTCAAATAGTA......................................................................................................................................2311.00100100
.....................................................................................................................................ATCTATTTGGCACGTCAGTAACG.................................................................................2311.00100100
..........................................................................................................................................TTTGGCACGTCAGTAACAGCCTTT...........................................................................2411.00100100
....................................................................................CCTGAAGTGTCAAATAGTAGAGTACACT.............................................................................................................................2811.00100100
..............................................................................GCAGTTCCTGAAGTGTCAAAA..........................................................................................................................................2111.00100100
....................................................................................................................................TATCTATTTGGCACGTCAGTAAA..................................................................................2311.00100100
...........................................................................................................................................TTGGCACGTCAGTAACAGCCC.............................................................................2111.00110000
........................................................................................................................................TATTTGGCACGTCAGTAACAA................................................................................2111.00100100
...................................................................................TCCTGAAGTGTCAAATAGTAGAGTAA................................................................................................................................2611.00100100
...........................................................................................................................................TTGGCACGTCAGTAACAGCCG.............................................................................2111.00110000
....................................................................................CCTGAAGTGTCAAATAGTAGA....................................................................................................................................2111.00100100
.....................................................................................................................................ATCTATTTGGCACGTCAGTAA...................................................................................2111.00100100
.............................................................................GGCAGTTCCTGAAGTGTCAA............................................................................................................................................2011.00100100
...................................................................................TCCTGAAGTGTCAAATAGTAGAGTA.................................................................................................................................2511.00100100
........................................................................................................................................TATTTGGCACGTCAGTAACATT...............................................................................2211.00100100
...................................................................................TCCTGAAGTGTCAAATAGTAGAGTAC................................................................................................................................2611.00100100
.........................................................................................................................................ATTTGGCACGTCAGTAACAGCC..............................................................................2211.00100100
................................................................................AGTTCCTGAAGTGTCAAATAT........................................................................................................................................2111.00100100
...................................................................................TCCTGAAGTGTCAAATAGTAGAGTACC...............................................................................................................................2711.00110000
................................................................................AGTTCCTGAAGTGTCAAATAGTC......................................................................................................................................2311.00100100
droAna3
C---------------------------------------------------------------GCGTCCCGTGACGGGCAGTTCCTGAACTGTCAAATAGTGGACGGCATA-------------------AA-CATATTTGGCACGTCAGTAACAGCCTGTTACAAGTCAGCGCACGACCA-GCACTACCGGCCAC----------------------------------------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
........................................................................................................................................TATTTGGCACGTCAGTAACAG................................................................................21127.00272001195
................................................................................AGTTCCTGAACTGTCAAATAGT.......................................................................................................................................22127.00272004912
..........................................................................................................................................TTTGGCACGTCAGTAACAGCCT.............................................................................22121.0021710490
..........................................................................................................................................TTTGGCACGTCAGTAACAGCC..............................................................................21120.00202005112
........................................................................................................................................TATTTGGCACGTCAGTAACA.................................................................................20119.00190002143
..........................................................................................................................................TTTGGCACGTCAGTAACAGC...............................................................................20117.00171001141
........................................................................................................................................TATTTGGCACGTCAGTAACAGC...............................................................................22116.00161002112
..........................................................................................................................................TTTGGCACGTCAGTAACAGCCTG............................................................................23112.00121200000
..........................................................................................................................................TTTGGCACGTCAGTAACAG................................................................................1916.006000240
...........................................................................................................................................TTGGCACGTCAGTAACAGCCTG............................................................................2216.006400110
................................................................................AGTTCCTGAACTGTCAAATAGTGT.....................................................................................................................................2414.004100021
..........................................................................................................................................TTTGGCACGTCAGTAACAGCCTGT...........................................................................2413.003300000
................................................................................AGTTCCTGAACTGTCAAATAGTG......................................................................................................................................2313.003200001
...........................................................................................................................................TTGGCACGTCAGTAACAGCCTGT...........................................................................2313.003100110
................................................................................AGTTCCTGAACTGTCAAATAGTT......................................................................................................................................2312.002200000
..........................................................................................................................................TTTGGCACGTCAGTAACAGT...............................................................................2012.002000020
........................................................................................................................................TATTTGGCACGTCAGTAACAGT...............................................................................2212.002000110
................................................................................AGTTCCTGAACTGTCAAATAG........................................................................................................................................2112.002000011
...........................................................................................................................................TTGGCACGTCAGTAACAGCCT.............................................................................2112.002200000
........................................................................................................................................TATTTGGCACGTCAGTAACAGCT..............................................................................2312.002000020
........................................................................................................................................TATTTGGCACGTCAGTAAC..................................................................................1911.001000001
........................................................................................................................................TATTTGGCACGTCAGTAACAGTT..............................................................................2311.001000010
..........................................................................................................................................TTTGGCACGTCAGTAACAGCA..............................................................................2111.001100000
........................................................................................................................................TATTTGGCACGTCAGTAACAT................................................................................2111.001000010
.............................................................................................................................................GGCACGTCAGTAACAGCCTG............................................................................2011.001100000
..........................................................................................................................................TTTGGCACGTCAGTAACAGCT..............................................................................2111.001000100
................................................................................AGTTCCTGAACTGTCAAATAGTGG.....................................................................................................................................2411.001000001
..........................................................................................................................................TTTGGCACGTCAGTAACAGAG..............................................................................2111.001000010
.......................................................................................................................................ATATTTGGCACGTCAGTAACAG................................................................................2211.001000010
...........................................................................................................................................TTGGCACGTCAGTAACAGCC..............................................................................2011.001100000
..........................................................................................................................................TTTGGCACGTCAGTAACAGA...............................................................................2011.001000010
droBip1
C---------------------------------------------------------------GCGTCCCGTGACGGGCAGTTCCTGAACTGTCAAATAGTGGACGGCATA-------------------AA-CATATTTGGCACGTCAGTAACAGCCTGTTACAAGACAGCGCACGACCA-GCAATACCGGCCACCTCGATGGAAGCGTACAGGGATCACTTTTGGTCGAC----SizeHit CountTotal NormTotal
No Reads
droKik1
----------------------------------------------------------------GCGTCCCGTGACAGGCAGTTCCTGAAGTGTCAAATAGTGGATGACATG-------------------AG-AATATTTGGCACCCCAGAGACAGCCTGTTACTGGGCAGCGAACGACCC----ATGCCG---------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEre2
ATGGCACCA---------------------------------------------------------------C-----------------------------------------------------------------------------------------------TAACGGGACGACCA-ACGGCACCAATGATGGCGCCGATAGCG----------ATCATACCGACAC----SizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
..............................................................................................................................................................................................CAATGATGGCGCCGATAGCG----------ATC..............2311.0010100000
...............................................................................................................................................................................................AATGATGGCGCCGATAGCG----------ATC..............2211.0010100000
........................................................................................................................................................................TAACGGGACGACCA-ACGGC.................................................1911.0010000100
.................................................................................................................................................................................GACCA-ACGGCACCAATGATGGC.....................................2211.0010100000
............................................................................................................................................................................................ACCAATGATGGCGCCGATAGCG----------AT...............2411.0010000010
...............................................................................................................................................................................................AATGATGGCGCCGATAGCG----------ATCATACC.........2711.0011000000
ATGGCACCA---------------------------------------------------------------C-----------------------------------------------------------------------------------------------TAACGGGAC............................................................1911.0010001000
.........................................................................................................................................................................AACGGGACGACCA-ACGGCAC...............................................2011.0010100000
..........................................................................................................................................................................ACGGGACGACCA-ACGGCACCA.............................................2111.0011000000
.................................................................................................................................................................................GACCA-ACGGCACCAATGAT........................................1911.0010100000
.......CA---------------------------------------------------------------C-----------------------------------------------------------------------------------------------TAACGGGACGACCA-ACGGC.................................................2211.0011000000

Generated: 10/20/2015 at 07:29 PM