ID:

dmo_204

 Coordinate:

scaffold_6328:2901301-2901376 -

 Confidence:

confident

 Class:

Testes-restricted

 Genomic Locale:

intergenic

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-34.0 -34.0 -33.9

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

GAATGGTCGACAATCGATAGATTTATCGATAGCAGTCCGTTCACAATTGCTGTTGATTTGGAATCACGAAACTCATCTGTTATGTAGCGAACGATAACAGTGAGTCTCGCATTCCAACTCAAAGGCAATAATTCAGTAGCAACGTTGTTAGTTTTGGCTCGATAAAAATCGATATT

******************************************...((((((.((((.(((((((..(((.(((((.(((((((((.....)).)))))))))))).))).))))))).)))).))))))...******************************************** 		Read size # Mismatch Hit Count Total Norm Total V110

male body		 M046

female body

 V056

head

 V049

head

 M060

embryo

 V041

embryo
.........................................................TTGGAATCACGAAACTCATCTGTT............................................................................................... 24 0 1 95.00 95 88 7 0 0 0 0
.........................................................TTGGAATCACGAAACTCATCTGTTC.............................................................................................. 25 1 1 49.00 49 45 3 0 1 0 0
.........................................................TTGGAATCACGAAACTCATCTGT................................................................................................ 23 0 1 41.00 41 36 3 0 0 2 0
.........................................................TTGGAATCACGAAACTCATCTG................................................................................................. 22 0 1 30.00 30 23 7 0 0 0 0
.........................................................TTGGAATCACGAAACTCATCTGTC............................................................................................... 24 1 1 29.00 29 28 0 1 0 0 0
.........................................................TTGGAATCACGAAACTCATCT.................................................................................................. 21 0 1 25.00 25 20 1 3 1 0 0
...............................................................................................AACAGTGAGTCTCGCATTCCAA........................................................... 22 0 1 23.00 23 21 0 0 2 0 0
..........................................................TGGAATCACGAAACTCATCTGTT............................................................................................... 23 0 1 12.00 12 6 3 2 0 0 1
................................................................................................ACAGTGAGTCTCGCATTCCAAC.......................................................... 22 0 1 8.00 8 6 1 1 0 0 0
................................................................................................ACAGTGAGTCTCGCATTCCAA........................................................... 21 0 1 7.00 7 6 0 0 1 0 0
.................................................................................................CAGTGAGTCTCGCATTCCAACT......................................................... 22 0 1 5.00 5 5 0 0 0 0 0
.........................................................TTGGAATCACGAAACTCATCTGTCT.............................................................................................. 25 2 1 5.00 5 5 0 0 0 0 0
.........................................................TTGGAATCACGAAACTCAT.................................................................................................... 19 0 1 4.00 4 3 1 0 0 0 0
..........................................................TGGAATCACGAAACTCATCTGT................................................................................................ 22 0 1 4.00 4 2 1 0 0 1 0
...............................................................................................AACAGTGAGTCTCGCATTCC............................................................. 20 0 1 3.00 3 2 1 0 0 0 0
.........................................................TTGGAATCACGAAACTCATCTGTTTC............................................................................................. 26 2 1 3.00 3 3 0 0 0 0 0
...............................................................................................AACAGTGAGTCTCGCATTCCAAT.......................................................... 23 1 1 3.00 3 3 0 0 0 0 0
.........................................................TTGGGATCACGAAACTCATCTGTC............................................................................................... 24 2 1 2.00 2 2 0 0 0 0 0
................................................................................................ACAGTGAGTCTCGCATTCCAAA.......................................................... 22 1 1 2.00 2 2 0 0 0 0 0
...............................................................................................AACAGTGAGTCTCGCATTCCAC........................................................... 22 1 1 2.00 2 2 0 0 0 0 0
..........................................................TGGAATCACGAAACTCATCTGTTA.............................................................................................. 24 0 1 2.00 2 2 0 0 0 0 0
................................................................................................ACAGTGAGTCTCGCATTCCAAT.......................................................... 22 1 1 2.00 2 2 0 0 0 0 0
...............................................................................................AACAGTGAGTCTCGCATTCCA............................................................ 21 0 1 2.00 2 1 1 0 0 0 0
...............................................................................................AACAGTGAGTCTCGCATTCCATC.......................................................... 23 1 1 2.00 2 2 0 0 0 0 0
.........................................................TTGGAATCACGAAACTCATCTGTTA.............................................................................................. 25 0 1 2.00 2 2 0 0 0 0 0
.........................................................TTGGAATCACGAAACTCATCTC................................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0
..........................................................TGGAATCGCGAAACTCATCTGTT............................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
.........................................................TTGGAATCACGAAACTCATCTGA................................................................................................ 23 1 1 1.00 1 1 0 0 0 0 0
.........................................................TTGGAATCACGAAACTCATCTGTCTC............................................................................................. 26 3 1 1.00 1 1 0 0 0 0 0
.........................................................TGGGAATCACGAAACTCATCTGTT............................................................................................... 24 1 1 1.00 1 0 0 0 0 1 0
.........................................................TTGGAATCACGAAACTCATCTGTTTCC............................................................................................ 27 3 1 1.00 1 0 1 0 0 0 0
...........................................................GGAATCACGAAACTCATCT.................................................................................................. 19 0 1 1.00 1 0 1 0 0 0 0
.........................................................TTGGAATCGCGAAACTCATCTGTTC.............................................................................................. 25 2 1 1.00 1 1 0 0 0 0 0
.........................................................TTGGAATCACGAAACTCACCTGTC............................................................................................... 24 2 1 1.00 1 1 0 0 0 0 0
................................................................................................ACAGTGAGTCTCGCATTCCATT.......................................................... 22 2 1 1.00 1 0 1 0 0 0 0
..........................................................TGGAATCACGAAACTCATC................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0
.........................................................TTGGAATCACGAAACTCATCTCTTC.............................................................................................. 25 2 1 1.00 1 1 0 0 0 0 0
..........................................................TTGAATCACGAAACTCATCTGTT............................................................................................... 23 1 1 1.00 1 1 0 0 0 0 0
.........................................................TTGGAATCACGAAACTCATCTGTTCG............................................................................................. 26 2 1 1.00 1 1 0 0 0 0 0
...............................................................................................AACAGTGAGTCTCGCATTCCAAC.......................................................... 23 0 1 1.00 1 1 0 0 0 0 0
................................................................................................ACAGTGAGTCTCGCATTCCAACT......................................................... 23 0 1 1.00 1 1 0 0 0 0 0
................................................................................................ACAGTGAGTCTCGCATTCCATC.......................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..........................................................TGGAATCACGAAACTCATCTGTTT.............................................................................................. 24 1 1 1.00 1 1 0 0 0 0 0
.........................................................TTGGAATCACGAAACTCATCTGTTCC............................................................................................. 26 2 1 1.00 1 0 1 0 0 0 0
.........................................................TTGGAATCACGAAACTCATC................................................................................................... 20 0 1 1.00 1 1 0 0 0 0 0
.........................................................TTGGAATCACGACACTCATCTGTT............................................................................................... 24 1 1 1.00 1 1 0 0 0 0 0
.........................................................TTGGAATCACGAAACTCATCTGTTAGTC........................................................................................... 28 3 1 1.00 1 1 0 0 0 0 0
..........................................................TGGAATCACGAAACTCATCTGTTCAA............................................................................................ 26 3 1 1.00 1 0 1 0 0 0 0
.........................................................TTGGAATCACGAAACTCATCTGTTT.............................................................................................. 25 1 1 1.00 1 1 0 0 0 0 0
.........................................................TTGGAATCACGAAACTCATCTGTTCCC............................................................................................ 27 3 1 1.00 1 0 1 0 0 0 0
.........................................................TTGGAATCACGAAACTCATCTGTCCT............................................................................................. 26 2 1 1.00 1 1 0 0 0 0 0
................................................................................................ACAGTGAGTCTCGCATTCTTC........................................................... 21 3 2 0.50 1 1 0 0 0 0 0
................................................................................................ACAGTGAGTCTCGCATTTTC............................................................ 20 3 7 0.14 1 1 0 0 0 0 0

Anti-sense strand reads

CTTACCAGCTGTTAGCTATCTAAATAGCTATCGTCAGGCAAGTGTTAACGACAACTAAACCTTAGTGCTTTGAGTAGACAATACATCGCTTGCTATTGTCACTCAGAGCGTAAGGTTGAGTTTCCGTTATTAAGTCATCGTTGCAACAATCAAAACCGAGCTATTTTTAGCTATAA

********************************************...((((((.((((.(((((((..(((.(((((.(((((((((.....)).)))))))))))).))).))))))).)))).))))))...****************************************** 		Read size # Mismatch Hit Count Total Norm Total V049

head

 V110

male body
.............................................................CTAGTGCTTTGAGGAGGCAAT.............................................................................................. 21 3 1 1.00 1 1 0
...........................................GTTGACGACAACTGCACCTT................................................................................................................. 20 3 15 0.20 3 0 3
........................................................................................................ATGGCGCAAGGTTGAGTT...................................................... 18 3 20 0.05 1 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droMoj3 scaffold_6328:2901251-2901426 - dmo_204 confident GAAT---GGTCGACAATC-GATAGATTTA----TCGA----------------------TAGCAGTCCGTTCACAATTGCTGTTGATTTGGAATCACGAAACTCATCTGTTATGTAGC-----------------------GAAC----------------------------GATAACAGTGAGTCTCGCATTCCAACTCAAAGGCAAT---------------------------------------------------------------------------------------AATTCAGTAGCAACGTTG--------TTAGTTTTGGCTCGATAAAAATCGATATT
droVir3 scaffold_13042:907038-907228 - dvi_343 confident GTGGC-CTAT-------C-GATAAACCTATCGATAAGCATAGCGCCCAA------------TCGATTAGTTGACAATTGCTGTTGATTTGGAATCACGACACTCAACTGTTATGTAGA-----------------------AAAC----------------------------GATAACAGTGAGTCTCGCGTTCCAACTCAAAGGCAAT---------------------------------------------------------------------------------------AATTCTCGAGCAACTTTGCGCGTCGATTCGATTTGTATCGATA--AATCGGCTTT
droGri2 scaffold_15081:2044694-2044817 - dgr_45 confident TCGGCT--AA---CAATT------------------------------------------------------------GTTGTTGGATTGGAATCACGACTCTCCGCTGTTATGTAGAAATACATTGTTTAACAA---------T----------------------------AATAACAACGAGTCTCGCGCTTCAAATCAAATGCAAT--------------------------------------------------------------------------------------TGGTTCTTCAGCAAT----------------------------------------G
droWil2 scf2_1100000004909:7956611-7956706 + TTGTA----------------------------------------------------------------------------GATGTGTTGGAATCACGACATTCAACTGTTATGTTTACATA---TGTCTAACATTCTGTTATAG----------------------------TATAACAGTGTGTCTTGCGTTCCTACTCAA-----------------------------------------------------------------------------------------------------------------------------------------------------
dp5 XR_group6:6281755-6281782 + TAT---CTATCG---ATTCTATCTATC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------ATCGAT-----------------------------------------
droPer2 scaffold_0:2844925-2844964 - CAATCC--AA---CAATC-TATTAATCTA----TCAATCCATC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--------ATCCAT-----------------------------------------
droAna3 scaffold_13417:2467815-2468020 - dan_68 confident ATT---G------------------------------------------------------------------------TAGGTGAGTTGGAATCACGACACTCACCTGTTATGCAAC-----------------------CCTCGCAGGCACCCTTGCAGACGGAACCCCTAAGTAACAGTGAGTCTCGCGTTCTAACTCAAATGCATTTCAAGAGCTATTGTCGAAGTTCCGTCGAAGTCGAACGCAGAACGTCGAATGGCAGCGCCTGGCCTAAGGAGATCCCTCCAGCGAACT--------AACCAT----------------------------------------T
droBip1 scf7180000395874:40214-40381 - ATT---G------------------------------------------------------------------------TAGGTGAGTTGGAATCACGGTACTCACCTGTTATGCAGC-----------------------CCGCGCAAGCATCCTTGCAGACGGC-CCCCCAAATAACAGTGAGTATTGCGTTCTAGCTCAAATGCATGTTTAGATCGCTTGTCCAGGTCCCA--GATGTTAGACGTGTAATCTCAAGTGAAAGCA-------------------------------------------C----------------------------------------C
droKik1 scf7180000302639:2182354-2182447 - AAATATCTAT-------C-TATCTAACTA----ACTTTCTATCTAACTATATTTATTGGTAGCTATCCATCAAAATTTACTATC--TTTGGCAGTATGCATCTTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT----------------------------------------T
droFic1 scf7180000453316:30248-30278 + TAT---CGATCT---ATC-TATCTATCTA----TT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------ATCTAT-----------------------------------------
droEle1 scf7180000490751:652105-652129 - TAATTG---AAA---ATT-AATAAATTAA----TT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G
droBia1 scf7180000302126:36937-36989 - CTTTTT--AT---ATATT-TATCTATCTA----TGAATCTTTT------------------------TAT---------------------------------------------------------------AA---------T----------------------------------------------------------------------TT---------------------------------------------------------------------------TAATT--------ATGAAT----------------------------------------C
droTak1 scf7180000415254:262240-262264 + CTATCT--AT---C-----TATCTATC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------ATCAAT----------------------------------------A
droEug1 scf7180000408745:8996-9057 + TAT---CTGTCG---ATA-TGTCTGTCTG----TAAATCTGTCGATATG----------------TCTGTC------------------------------------------------------------------------------------------------------------T----G------------------------------TA---------------------------------------------------------------------------AATCT--------GTCGAT--------------------------------------CTG
dm3 chrUextra:27105347-27105392 - CTATCG--AT---CGATC-TATCGATCTA----TCGATCTATC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACCT--------ATCGAT--------------------------------------C-T
droSim2 2r:16141848-16141894 - CCGTCA--AT---CAATC-----ATTTTA----GT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAGTTTTTGTTGTTC---------------------------------------------------------------TT--------ATGAAA----------------------------------------T
droSec2 scaffold_14049:140-201 - GAT---CTATCT---ATC-TATCGATATA----TCTGTCTATCTATCTG----------------TCTATC------------------------------------------------------------------------------------------------------------C----A------------------------------TC---------------------------------------------------------------------------TAGCT--------ATCGAT--------------------------------------CTG
droYak3 X:15893135-15893180 - TAT---CTATCT---ATC-TATCCATAT----------------------------------CTAACTGTCAAG---------------------------------------------------------------------------------------------------------------------------------------------TG---------------------------------------------------------------------------CAACT--------GTTGAT-----------------------------------------
droEre2 scaffold_4845:6459535-6459567 - CAATCT--AT-----ATC-TATCTATAT----------------------------------CTATC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------ATCTAT----------------------------------------A

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
GAAT---GGTCGACAATC-GATAGATTTA----TCGA----------------------TAGCAGTCCGTTCACAATTGCTGTTGATTTGGAATCACGAAACTCATCTGTTATGTAGC-----------------------GAAC----------------------------GATAACAGTGAGTCTCGCATTCCAACTCAAAGGCAAT---------------------------------------------------------------------------------------AATTCAGTAGCAACGTTG--------TTAGTTTTGGCTCGATAAAAATCGATATTSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
.......................................................................................TTGGAATCACGAAACTCATCTGTT.................................................................................................................................................................................................................................................24195.00957000088
.......................................................................................TTGGAATCACGAAACTCATCTGTTC................................................................................................................................................................................................................................................25149.00493010045
.......................................................................................TTGGAATCACGAAACTCATCTGT..................................................................................................................................................................................................................................................23141.00413000236
.......................................................................................TTGGAATCACGAAACTCATCTG...................................................................................................................................................................................................................................................22130.00307000023
.......................................................................................TTGGAATCACGAAACTCATCTGTC.................................................................................................................................................................................................................................................24129.00290001028
.......................................................................................TTGGAATCACGAAACTCATCT....................................................................................................................................................................................................................................................21125.00251013020
................................................................................................................................................................................AACAGTGAGTCTCGCATTCCAA..........................................................................................................................................................22123.00230020021
........................................................................................TGGAATCACGAAACTCATCTGTT.................................................................................................................................................................................................................................................23112.0012310206
.................................................................................................................................................................................ACAGTGAGTCTCGCATTCCAAC.........................................................................................................................................................2218.008100106
.................................................................................................................................................................................ACAGTGAGTCTCGCATTCCAA..........................................................................................................................................................2117.007001006
..................................................................................................................................................................................CAGTGAGTCTCGCATTCCAACT........................................................................................................................................................2215.005000005
.......................................................................................TTGGAATCACGAAACTCATCTGTCT................................................................................................................................................................................................................................................2515.005000005
.......................................................................................TTGGAATCACGAAACTCAT......................................................................................................................................................................................................................................................1914.004100003
........................................................................................TGGAATCACGAAACTCATCTGT..................................................................................................................................................................................................................................................2214.004100012
................................................................................................................................................................................AACAGTGAGTCTCGCATTCC............................................................................................................................................................2013.003100002
.......................................................................................TTGGAATCACGAAACTCATCTGTTTC...............................................................................................................................................................................................................................................2613.003000003
................................................................................................................................................................................AACAGTGAGTCTCGCATTCCAAT.........................................................................................................................................................2313.003000003
.................................................................................................................................................................................ACAGTGAGTCTCGCATTCCAAA.........................................................................................................................................................2212.002000002
................................................................................................................................................................................AACAGTGAGTCTCGCATTCCAC..........................................................................................................................................................2212.002000002
........................................................................................TGGAATCACGAAACTCATCTGTTA................................................................................................................................................................................................................................................2412.002000002
.................................................................................................................................................................................ACAGTGAGTCTCGCATTCCAAT.........................................................................................................................................................2212.002000002
................................................................................................................................................................................AACAGTGAGTCTCGCATTCCA...........................................................................................................................................................2112.002100001
.......................................................................................TTGGAATCACGAAACTCATCTGTTA................................................................................................................................................................................................................................................2512.002000002
.......................................................................................TTGGAATCACGAAACTCATCTC...................................................................................................................................................................................................................................................2211.001000001
.......................................................................................TTGGAATCACGAAACTCATCTGA..................................................................................................................................................................................................................................................2311.001000001
.......................................................................................TTGGAATCACGAAACTCATCTGTCTC...............................................................................................................................................................................................................................................2611.001000001
.......................................................................................TTGGAATCACGAAACTCATCTGTTTCC..............................................................................................................................................................................................................................................2711.001100000
.........................................................................................GGAATCACGAAACTCATCT....................................................................................................................................................................................................................................................1911.001100000
.................................................................................................................................................................................ACAGTGAGTCTCGCATTCCATT.........................................................................................................................................................2211.001100000
........................................................................................TGGAATCACGAAACTCATC.....................................................................................................................................................................................................................................................1911.001100000
.......................................................................................TTGGAATCACGAAACTCATCTGTTCG...............................................................................................................................................................................................................................................2611.001000001
................................................................................................................................................................................AACAGTGAGTCTCGCATTCCAAC.........................................................................................................................................................2311.001000001
.................................................................................................................................................................................ACAGTGAGTCTCGCATTCCAACT........................................................................................................................................................2311.001000001
........................................................................................TGGAATCACGAAACTCATCTGTTT................................................................................................................................................................................................................................................2411.001000001
.......................................................................................TTGGAATCACGAAACTCATCTGTTCC...............................................................................................................................................................................................................................................2611.001100000
.......................................................................................TTGGAATCACGAAACTCATC.....................................................................................................................................................................................................................................................2011.001000001
.......................................................................................TTGGAATCACGAAACTCATCTGTTAGTC.............................................................................................................................................................................................................................................2811.001000001
........................................................................................TGGAATCACGAAACTCATCTGTTCAA..............................................................................................................................................................................................................................................2611.001100000
.......................................................................................TTGGAATCACGAAACTCATCTGTTT................................................................................................................................................................................................................................................2511.001000001
.......................................................................................TTGGAATCACGAAACTCATCTGTTCCC..............................................................................................................................................................................................................................................2711.001100000
.................................................................................................................................................................................ACAGTGAGTCTCGCATTCTTC..........................................................................................................................................................2120.501000001
.................................................................................................................................................................................ACAGTGAGTCTCGCATTTTC...........................................................................................................................................................2070.141000001
droVir3
GTGGC-CTAT-------C-GATAAACCTATCGATAAGCATAGCGCCCAA------------TCGATTAGTTGACAATTGCTGTTGATTTGGAATCACGACACTCAACTGTTATGTAGA-----------------------AAAC----------------------------GATAACAGTGAGTCTCGCGTTCCAACTCAAAGGCAAT---------------------------------------------------------------------------------------AATTCTCGAGCAACTTTGCGCGTCGATTCGATTTGTATCGATA--AATCGGCTTTSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
................................................................................................................................................................................AACAGTGAGTCTCGCGTTCCA...........................................................................................................................................................21125086.00250861045255684258115123430100300301457018124149542953462070506415254101348400000000000000000001117700223000000001001
................................................................................................................................................................................AACAGTGAGTCTCGCGTTCCAA..........................................................................................................................................................22115363.001536300101642053168579000020000018161180286300127071199335928823102760200000000000000000001039603531000000000000
................................................................................................................................................................................AACAGTGAGTCTCGCGTTCC............................................................................................................................................................20110462.001046220091996661333161076512120000014670115133311811207441912082110107558000000000000000000001350000430662102611010
.......................................................................................TTGGAATCACGACACTCAACTGTTC................................................................................................................................................................................................................................................2514051.00405120130010140117000000000032300201129906972841046020300000276000000000000000001400014000200164578300042
................................................................................................................................................................................AACAGTGAGTCTCGCGTTC.............................................................................................................................................................1911937.001937260110421541954247300000000022100100120163196792040172101079500000000000000000000024000111745861300132
.................................................................................................................................................................................ACAGTGAGTCTCGCGTTCCA...........................................................................................................................................................2011715.001715002005112092110200000000012510000113333401362770620000053000000000000000000000900000000000000000
..........................................................................................GAATCACGACACTCAACTGTTAT...............................................................................................................................................................................................................................................2311600.00160011070030201000000000014000000064239310338208000006000000000001000000000202115083031100000
.......................................................................................TTGGAATCACGACACTCAACTGTT.................................................................................................................................................................................................................................................2411191.00119100101171180500000000107500210403622756320003300000620000000000000000120007000660148757300211
.................................................................................................................................................................................ACAGTGAGTCTCGCGTTCCAA..........................................................................................................................................................2111002.001002000002809020000000000012100200112332017919005500000370000000000000000000002300101000000000000
.................................................................................................................................................................................ACAGTGAGTCTCGCGTTCCAAT.........................................................................................................................................................221696.006961010013020900000000004900000002121555413203100000230000000000000000000001400000000000000000
................................................................................................................................................................................AACAGTGAGTCTCGCGTTCCAAT.........................................................................................................................................................231663.00663000019014070000000000660000000161147471330470000021000000000000000000000900000000000001000
................................................................................................................................................................................AACAGTGAGTCTCGCGTTCCC...........................................................................................................................................................211576.005761020159049024100000001016810000003333214306800000590000000000000000000001200000000000000000
................................................................................................................................................................................AACAGTGAGTCTCGCGTTCCAAA.........................................................................................................................................................231561.0056100100110130230000000000580001110113864316102200100110000000000000000000001400010000000000000
.......................................................................................TTGGAATCACGACACTCAACTGT..................................................................................................................................................................................................................................................231517.0051710001170250210000000000160000100126102321080190000027000000000000000003000400021151000010003
................................................................................................................................................................................AACAGTGAGTCTCGCGTTCCAT..........................................................................................................................................................221480.004800000114080500000000006300000001039537940280000025000000000000000000000500000020000000000
..........................................................................................GAATCACGACACTCAACTGTTATCC.............................................................................................................................................................................................................................................251415.00415907000000000000000002100000087705017704000005000000000000000000000100100001000000000
..........................................................................................GAATCACGACACTCAACTGTTATC..............................................................................................................................................................................................................................................241409.0040913010000000000000000031000000152864010304100002000000000000000001000000000011000000000
.................................................................................................................................................................................ACAGTGAGTCTCGCGTTCC............................................................................................................................................................191302.0030220000292300320000000000480000000354412290210000013000000000000000000000300000002000000000
........................................................................................TGGAATCACGACACTCAACTGTTC................................................................................................................................................................................................................................................241301.00301002001000200001000001000000008871288204000007000000000000000001000100000000000010101
.......................................................................................TTGGAATCACGACACTCAACT....................................................................................................................................................................................................................................................211300.003002001021900020000000000140000000201933830340000040000000000000000000000700010001012001000
.......................................................................................TTGGAATCACGACACTCAACTGTTCC...............................................................................................................................................................................................................................................261276.00276401008000100000000002200000004732281070120000011000000000000000000000000000021000000000
........................................................................................TGGAATCACGACACTCAACTGTT.................................................................................................................................................................................................................................................231259.00259001001020100000000004001002010267144802010005000000000000000001000100020000000011002
...................................................................................................................................................................................AGTGAGTCTCGCGTTCCA...........................................................................................................................................................181255.00255000004010417400000000003500000004703015000017000000000000000000000000000000000000000
................................................................................................................................................................................AACAGTGAGTCTCGCGTTCCAC..........................................................................................................................................................221255.0025500001220302000000000010800000001383150460000131000000000000000000000100000100000000000
........................................................................................TGGAATCACGACACTCAACTGTTA................................................................................................................................................................................................................................................241240.00240000000010200000000001001000008251245402000008000000000000000000000000011000000010101
.................................................................................................................................................................................ACAGTGAGTCTCGCGTTCCAAC.........................................................................................................................................................221202.00202000002010300000000001100000005942214805000003000000000000000000000600000010000000000
................................................................................................................................................................................AACAGTGAGTCTCGCGTTCCAATC........................................................................................................................................................241180.0018000000800010000000000190000000312918350190000015000000000000000000000500000000000000000
................................................................................................................................................................................AACAGTGAGTCTCGCGTTCCT...........................................................................................................................................................211161.0016100000402502200000000001700000001425727013000004000000000000000000000300000000000000000
..........................................................................................GAATCACGACACTCAACTGTTA................................................................................................................................................................................................................................................221148.0014830110000000000000000200000005235122701000002000000000000000000000000000022403100000
.......................................................................................TTGGAATCACGACACTCAACTGTCC................................................................................................................................................................................................................................................251145.0014500000200000000000000140000000131216430210000218000000000000000000000300000010000000000
................................................................................................................................................................................AACAGTGAGTCTCGCGTT..............................................................................................................................................................181134.001341010041301300000000002100200011530617010000007000000000000000000000000000002000000000
.......................................................................................TTGGAATCACGACACTCAACTGTTT................................................................................................................................................................................................................................................251129.001290000020200000000000030000000423552007000005000000000000000000000000010131010000010
...............................................................................................................................................................................TAACAGTGAGTCTCGCGTTCCA...........................................................................................................................................................221120.0012000000204060000000000110000000322772404000002000000000000000000000100000000000000000
.......................................................................................TTGGAATCACGACACTCAACTG...................................................................................................................................................................................................................................................221107.001075010010001000000000030000000271892305001003000000000000000000000600000020000002000
.................................................................................................................................................................................ACAGTGAGTCTCGCGTTCCAATC........................................................................................................................................................231106.00106000004000000000000001300000002081328070000030000000000000000000001000000000000000000
................................................................................................................................................................................AACAGTGAGTCTCGCGTTCCAAC.........................................................................................................................................................23190.009010000401000000000000190000000161191606000003000000000000000000000400000000000000000
.......................................................................................TTGGAATCACGACACTCAACTGTTA................................................................................................................................................................................................................................................25185.00851000000000000000000080000010191481005000000000000000000000000000100022112000020233
...............................................................................................................................................................................TAACAGTGAGTCTCGCGTTCC............................................................................................................................................................21182.0082000001020140000000000160000000121211006000005000000000000000000000300000000000000000
.................................................................................................................................................................................ACAGTGAGTCTCGCGTTCCAT..........................................................................................................................................................21168.00680000010100000000000050000100161671109000001000000000000000000000000000000000000000
........................................................................................TGGAATCACGACACTCAACTGT..................................................................................................................................................................................................................................................22167.0067001000010100000000000000000091482800000001000000000000000000000000010000000000102
................................................................................................................................................................................AACAGTGAGTCTCGCGTTCCAAAA........................................................................................................................................................24159.005900100101040000000000400000009442001000001000000000000000000000404001000000000000
.......................................................................................TTGGAATCACGACACTCAACTGTC.................................................................................................................................................................................................................................................24157.00571000010000000000000040000000151221005000006000000000000000000000100000000000000000
.................................................................................................................................................................................ACAGTGAGTCTCGCGTTCCAACT........................................................................................................................................................23155.00551000010101000000000060000000161131301000001000000000000000000000000000000000000000
................................................................................................................................................................................AACAGTGAGTCTCGCGTTCCCC..........................................................................................................................................................22151.005100000100030000000000300000000121502000006000000000000000000000000000000000000000
.........................................................................................GGAATCACGACACTCAACTGTTAT...............................................................................................................................................................................................................................................24145.0045201100000000000000002000000021411000000000000000000000000000000001010000010000000
..................................................................................................................................................................................CAGTGAGTCTCGCGTTCCAACT........................................................................................................................................................22143.004300000102010000000000800000009521102000000000000000000000000000200000000000000000
.................................................................................................................................................................................ACAGTGAGTCTCGCGTTCCAAA.........................................................................................................................................................22143.004300100000000000000000300000001863404000001000000000000000000000300000000000000000
...............................................................................................................................................................................TAACAGTGAGTCTCGCGTTC.............................................................................................................................................................20141.00410000010004000000000070000000745404000004000000000000000000000100000000000000000
....................................................................................................................................................................................GTGAGTCTCGCGTTCCAA..........................................................................................................................................................18139.0039000001040500000000001200000003022010000000000000000000000000000000000000000000000
................................................................................................................................................................................AACAGTGAGTCTCGCGTTCCCT..........................................................................................................................................................22138.003800000100010000000000130000000260602000004000000000000000000000000000000102000000
.......................................................................................TTGGAATCACGACACTCAACTGTTCCC..............................................................................................................................................................................................................................................27138.003830000100000000000000400000005361401000000000000000000000000000000000010000000000
.................................................................................................................................................................................ACAGTGAGTCTCGCGTTC.............................................................................................................................................................18137.00370010010415000000000040000000480106000002000000000000000000000000000000000000000
........................................................................................TGGAATCACGACACTCAACTG...................................................................................................................................................................................................................................................21134.003400300000000000000000000000003312702000003000000000000000000000100000000000000000
.................................................................................................................................................................................ACAGTGAGTCTCGCGTTCCC...........................................................................................................................................................20131.003100000106020000000000100000000000403000005000000000000000000000000000000000000000
..........................................................................................GAATCACGACACTCAACTGTT.................................................................................................................................................................................................................................................21130.003010000000000000000000100000006114700000000000000000000000000000000000000000000000
.......................................................................................TTGGAATCACGACACTCAACTGTTAA...............................................................................................................................................................................................................................................26130.003000010000000000000000000000000002000000000000000000000000000000000817000000000110
.......................................................................................TTGGAATCACGACACTCAACTGTTCA...............................................................................................................................................................................................................................................26129.00290000000000000000000000010000582500000011000000000000000000000101000000001210000
........................................................................................TGGAATCACGACACTCAACTGTTAT...............................................................................................................................................................................................................................................25127.002700000000000000000000000000001171600000000000000000000000000000000000100000000001
.................................................................................................................................................................................ACAGTGAGTCTCGCGTTCCATT.........................................................................................................................................................22127.002700000001000000000000000000005411400000002000000000000000000000000000000000000000
.................................................................................................................................................................................ACAGTGAGTCTCGCGTTCCAACC........................................................................................................................................................23126.002600000000000000000000500000003131002000001000000000000000000000100000000000000000
..........................................................................................GAATCACGACACTCAACTGTTATCCC............................................................................................................................................................................................................................................26125.002510000000000000000000000000003131600000000000000000000000000000100000000000000000
...................................................................................................................................................................................AGTGAGTCTCGCGTTCCAA..........................................................................................................................................................19125.00250000040101000000000020000000531402000002000000000000000000000000000000000000000
................................................................................................................................................................................AACAGTGAGTCTCGCGTTCCATT.........................................................................................................................................................23123.00230000020200000000000000000000540600000000000000000000000000000400000000000000000
........................................................................................TGGAATCACGACACTCAACTGTTAA...............................................................................................................................................................................................................................................25121.00210000000000000000000000000000201200001000000000000000000000000000046100000020002
..........................................................................................GAATCACGACACTCAACTGTTC................................................................................................................................................................................................................................................22121.00211010000000000000000000000000733400000001000000000000000000000000000010000000000
.................................................................................................................................................................................ACAGTGAGTCTCGCGTTCCAATCT.......................................................................................................................................................24121.00210000010000000000000030000000425402000000000000000000000000000000000000000000000
................................................................................................................................................................................AACAGTGAGTCTCGCGTTCCG...........................................................................................................................................................21120.00200000020701000000000030000000120300000001000000000000000000000000000000000000000
........................................................................................TGGAATCACGACACTCAACTGTTT................................................................................................................................................................................................................................................24120.002000000001000000000000000000001042300000000000000000000000000000000000000000000000
................................................................................................................................................................................AACAGTGAGTCTCGCGTTCCAATCT.......................................................................................................................................................25120.00200000010000000000000020000000614600000000000000000000000000000000000000000000000
........................................................................................TGGAATCACGACACTCAACTGTTATCC.............................................................................................................................................................................................................................................27119.00190000000000000000000000000000821700000001000000000000000000000000000000000000000
................................................................................................................................................................................AACAGTGAGTCTCGCGTTCCAACC........................................................................................................................................................24119.00190000000001000000000060000000400500000001000000000000000000000200000000000000000
...........................................................................................AATCACGACACTCAACTGTTAT...............................................................................................................................................................................................................................................22118.00180010000000000000000000000000932300000000000000000000000000000000000000000000000
................................................................................................................................................................................AACAGTGAGTCTCGCGTTCT............................................................................................................................................................20118.00180000000204000000000020000000130002000003000000000000000000000100000000000000000
.................................................................................................................................................................................ACAGTGAGTCTCGCGTTCCAC..........................................................................................................................................................21118.00180000020100000000000060000000112003000002000000000000000000000000000000000000000
..................................................................................................................................................................................CAGTGAGTCTCGCGTTCCAA..........................................................................................................................................................20117.00170000000000000000000000000000540403000000000000000000000000000100000000000000000
..................................................................................................................................................................................CAGTGAGTCTCGCGTTCCA...........................................................................................................................................................19117.00170010000100000000000020000000341401000000000000000000000000000000000000000000000
................................................................................................................................................................................AACAGTGAGTCTCGCGTTCCTC..........................................................................................................................................................22117.00171000010100000000000050000000611000000001000000000000000000000000000000000000000
................................................................................................................................................................................AACAGTGAGTCTCGCGTC..............................................................................................................................................................18115.00150000010004000000000020000000020302000000000000000000000000000000000001000000000
...........................................................................................AATCACGACACTCAACTGTTATG..............................................................................................................................................................................................................................................23115.00150000000000000000000000000000840300000000000000000000000000000000000000000000000
.........................................................................................GGAATCACGACACTCAACTGTTA................................................................................................................................................................................................................................................23115.00151000000000000000000000000000400601000000000000000000000000000000000000100200000
................................................................................................................................................................................AACAGTGAGTCTCGCGTTCCACT.........................................................................................................................................................23114.00140000020000000000000070000000020000000003000000000000000000000000000000000000000
.......................................................................................TTGGAATCACGACACTCAACTGTTAAA..............................................................................................................................................................................................................................................27114.00140000000000000000000000000000000000000000000000000000000000000000046000000010012
.................................................................................................................................................................................ACAGTGAGTCTCGCGTTCCT...........................................................................................................................................................20113.00130000010201100000000020000000040100000001000000000000000000000000000000000000000
...................................................................................................................................................................................AGTGAGTCTCGCGTTCCAACT........................................................................................................................................................21113.00130000010002000000000010000000400401000000000000000000000000000000000000000000000
.........................................................................................GGAATCACGACACTCAACTGTTATCC.............................................................................................................................................................................................................................................26113.00132000000000000000000000000000142400000000000000000000000000000000000000000000000
................................................................................................................................................................................AACAGTGAGTCTCGCGTTT.............................................................................................................................................................19111.00110000010101000000000010000000223000000000000000000000000000000000000000000000000
.......................................................................................TTGGAATCACGACACTCAAC.....................................................................................................................................................................................................................................................20111.00110000000000000000000020000000002401000001000000000000000000000100000000000000000
........................................................................................TGGAATCACGACACTCAACT....................................................................................................................................................................................................................................................20111.00110000000000000000000000000000111401000003000000000000000000000000000000000000000
........................................................................................TGGAATCACGACACTCAACTGTTATC..............................................................................................................................................................................................................................................26111.00110000000000000000000000000000421300000001000000000000000000000000000000000000000
................................................................................................................................................................................AACAGTGAGTCTCGCGTTCCAAG.........................................................................................................................................................23110.00100000000200000000000010000000320200000000000000000000000000000000000000000000000
................................................................................................................................................................................AACAGTGAGTCTCGCGTTCCAAAAA.......................................................................................................................................................2519.0090000000001000000000000000000011410001000000000000000000000000000000000000000000
.........................................................................................GGAATCACGACACTCAACTGTTATC..............................................................................................................................................................................................................................................2519.0092000000000000000000000000000231100000000000000000000000000000000000000000000000
................................................................................................................................................................................AACAGTGAGTCTCGCGTTCCTT..........................................................................................................................................................2219.0090000000000000000000030000000130200000000000000000000000000000000000000000000000
.......................................................................................TTGGAATCACGACACTCAACTGTTAT...............................................................................................................................................................................................................................................2618.0080010000000000000000000000000100300000000000000000000000000000000021000000000000
.....................................................................TTGACAATTGCTGTTGATTT.......................................................................................................................................................................................................................................................................2018.0080000100000000000000010000000300300000000000000000000000000000000000000000000000
.................................................................................................................................................................................ACAGTGAGTCTCGCGTTCCCT..........................................................................................................................................................2118.0080000000100000000000050000000000001000001000000000000000000000000000000000000000
................................................................................................................................................................................AACAGTGAGTCTCGCGTTCCACTC........................................................................................................................................................2418.0080000020000000000000050000000000001000000000000000000000000000000000000000000000
................................................................................................................................................................................AACAGTGAGTCTCGCGTTCCAAAC........................................................................................................................................................2418.0080000000000000000000020000000011400000000000000000000000000000000000000000000000
.......................................................................................TTGGAATCACGACACTCAACTC...................................................................................................................................................................................................................................................2218.0081000020001000000000000000000100003000000000000000000000000000000000000000000000
..........................................................................................GAATCACGACACTCAACTGT..................................................................................................................................................................................................................................................2017.0070000000000000000000000000000032200000000000000000000000000000000000000000000000
...............................................................................................................................................................................TAACAGTGAGTCTCGCGTTCCC...........................................................................................................................................................2217.0070000010001000000000020000000000102000000000000000000000000000000000000000000000
................................................................................................................................................................................AACAGTGAGTCTCGCGTTCCACA.........................................................................................................................................................2317.0070000000000000000000050000000000002000000000000000000000000000000000000000000000
..................................................................................................................................................................................CAGTGAGTCTCGCGTTCCAAC.........................................................................................................................................................2117.0070000000000000000000000000000110400000000000000000000000000000100000000000000000
.......................................................................................TTGGAATCACGACACTCAACTGTTATC..............................................................................................................................................................................................................................................2717.0070000000000000000000000000000001501000000000000000000000000000000000000000000000
........................................................................................TGGAATCACGACACTCAACTGTTCC...............................................................................................................................................................................................................................................2516.0060000000000000000000020000000020200000000000000000000000000000000000000000000000
.......................................................................................TTGGAATCACGACACTCAA......................................................................................................................................................................................................................................................1916.0060000000000000000000000000000001400000000000000000000000000000100000000000000000
.......................................................................................TTGGAATCACGACACTCAACTGTCT................................................................................................................................................................................................................................................2516.0060000000000000000000000000000211200000000000000000000000000000000000000000000000
.......................................................................................TTGGAATCACGACACTCAACTGTTATCC.............................................................................................................................................................................................................................................2816.0060000000000000000000000000000121200000000000000000000000000000000000000000000000
........................................................................................TGGAATCACGACACTCAACTGTTAAA..............................................................................................................................................................................................................................................2616.0060000000000000000000000000000000000000000000000000000000000000000031000000000002
...........................................................................................AATCACGACACTCAACTGTTATCC.............................................................................................................................................................................................................................................2415.0050010000000000000000000000000021100000000000000000000000000000000000000000000000
...............................................................................................ACGACACTCAACTGTTAT...............................................................................................................................................................................................................................................1815.0050010000000000000000000000000000400000000000000000000000000000000000000000000000
..........................................................................................GAATCACGACACTCAACTGTTATTC.............................................................................................................................................................................................................................................2515.0050000000000000000000000000000220100000000000000000000000000000000000000000000000
...................................................................................................................................................................................AGTGAGTCTCGCGTTCCC...........................................................................................................................................................1815.0050000020000000000000010000000000002000000000000000000000000000000000000000000000
................................................................................................................................................................................AACAGTGAGTCTCGCGTTCCAG..........................................................................................................................................................2215.0050000000000000000000020000000000101000001000000000000000000000000000000000000000
.......................................................................................TTGGAATCACGACACTCAACTT...................................................................................................................................................................................................................................................2215.0050000000000000000000000000000001101000002000000000000000000000000000000000000000
................................................................................................................................................................................AACAGTGAGTCTCGCGTTCA............................................................................................................................................................2015.0050000000000000000000000000000200000000000000000000000000000000000000000100200000
................................................................................................................................................................................AACAGTGAGTCTCGCGTTCCAACT........................................................................................................................................................2415.0050000000000000000000010000000010001000000000000000000000000010000000000100000000
..................................................................................................................................................................................CAGTGAGTCTCGCGTTCC............................................................................................................................................................1814.0040000000000000000000000000000021100000000000000000000000000000000000000000000000
................................................................................................................................................................................AACAGTGAGTCTCGCGTTA.............................................................................................................................................................1914.0040000000200000000000000000000100001000000000000000000000000000000000000000000000
...............................................................................................................................................................................TAACAGTGAGTCTCGCGTTCCT...........................................................................................................................................................2214.0040000000001000000000000000000200100000000000000000000000000000000000000000000000
.......................................................................................TTGGAATCACGACACTCAACTGTTCCT..............................................................................................................................................................................................................................................2714.0040000000000000000000000000000031000000000000000000000000000000000000000000000000
..........................................................................................GAATCACGACACTCAACTGTTATG..............................................................................................................................................................................................................................................2414.0040000000000000000000000000000120100000000000000000000000000000000000000000000000
.................................................................................................................................................................................ACAGTGAGTCTCGCGTTCCCC..........................................................................................................................................................2114.0040000000000000000000010000000000001000002000000000000000000000000000000000000000
.................................................................................................................................................................................ACAGTGAGTCTCGCGTTCCAACA........................................................................................................................................................2314.0040000000000000000000010000000210000000000000000000000000000000000000000000000000
droGri2
TCGGCT--AA---CAATT------------------------------------------------------------GTTGTTGGATTGGAATCACGACTCTCCGCTGTTATGTAGAAATACATTGTTTAACAA---------T----------------------------AATAACAACGAGTCTCGCGCTTCAAATCAAATGCAAT--------------------------------------------------------------------------------------TGGTTCTTCAGCAAT----------------------------------------GSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
........................................................................................TGGAATCACGACTCTCCGCTGT..................................................................................................................................................................................................................................................22153.0053251
........................................................................................TGGAATCACGACTCTCCGCTGTT.................................................................................................................................................................................................................................................2315.00505
.................................................................................................................................................................................ACAACGAGTCTCGCGCTTCA...........................................................................................................................................................2012.00202
........................................................................................TGGAATCACGACTCTCCG......................................................................................................................................................................................................................................................1812.00202
.................................................................................................................................................................................ACAACGAGTCTCGCGCTTCAAAT........................................................................................................................................................2311.00101
.................................................................................................................................................................................ACAACGAGTCTCGCGCTTCAA..........................................................................................................................................................2111.00101
........................................................................................TGGAATCACGACTCTCCGCT....................................................................................................................................................................................................................................................2011.00101
........................................................................................TGGAATCACGACTCTCCGCTGC..................................................................................................................................................................................................................................................2211.00101
........................................................................................TGGAATCACGACTCTCCGC.....................................................................................................................................................................................................................................................1911.00101
droWil2
TTGTA----------------------------------------------------------------------------GATGTGTTGGAATCACGACATTCAACTGTTATGTTTACATA---TGTCTAACATTCTGTTATAG----------------------------TATAACAGTGTGTCTTGCGTTCCTACTCAA-----------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
........................................................................................TGGAATCACGACATTCAACTGTTA................................................................................................................................................................................................................................................24110.001000811
........................................................................................TGGAATCACGACATTCAACTGTT.................................................................................................................................................................................................................................................2314.00400400
........................................................................................TGGAATCACGACATTCAACTGTTC................................................................................................................................................................................................................................................2412.00200200
...................................................................................................................................................................................AGTGTGTCTTGCGTTCCTACT........................................................................................................................................................2112.00200101
..................................................................................................................................................................................CAGTGTGTCTTGCGTTCCTACT........................................................................................................................................................2212.00200110
................................................................................................................................................................................AACAGTGTGTCTTGCGTTCCT...........................................................................................................................................................2111.00100001
...................................................................................................................................................................................AGTGTGTCTTGCGTTCCTACTC.......................................................................................................................................................2211.00110000
................................................................................................................................................................................AACAGTGTGTCTTGCGTTCCTA..........................................................................................................................................................2211.00100100
..................................................................................................................................................................................CAGTGTGTCTTGCGTTCCTAC.........................................................................................................................................................2111.00100001
.................................................................................................................................................................................ACAGTGTGTCTTGCGTTCCTAC.........................................................................................................................................................2211.00100001
dp5
TAT---CTATCG---ATTCTATCTATC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------ATCGAT-----------------------------------------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
No Reads
droPer2
CAATCC--AA---CAATC-TATTAATCTA----TCAATCCATC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A--------ATCCAT-----------------------------------------SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
No Reads
droAna3
ATT---G------------------------------------------------------------------------TAGGTGAGTTGGAATCACGACACTCACCTGTTATGCAAC-----------------------CCTCGCAGGCACCCTTGCAGACGGAACCCCTAAGTAACAGTGAGTCTCGCGTTCTAACTCAAATGCATTTCAAGAGCTATTGTCGAAGTTCCGTCGAAGTCGAACGCAGAACGTCGAATGGCAGCGCCTGGCCTAAGGAGATCCCTCCAGCGAACT--------AACCAT----------------------------------------TSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
........................................................................................TGGAATCACGACACTCACCTGTT.................................................................................................................................................................................................................................................23172.0072370021914
.................................................................................................................................................................................ACAGTGAGTCTCGCGTTCTAAC.........................................................................................................................................................22152.005212002335
.................................................................................................................................................................................ACAGTGAGTCTCGCGTTCTAACT........................................................................................................................................................23133.003310002210
.................................................................................................................................................................................ACAGTGAGTCTCGCGTTCTAA..........................................................................................................................................................21133.003340021710
........................................................................................TGGAATCACGACACTCACCTGTTA................................................................................................................................................................................................................................................24128.00281710127
.................................................................................................................................................................................ACAGTGAGTCTCGCGTTCTA...........................................................................................................................................................20117.00170003104
........................................................................................TGGAATCACGACACTCACCTGT..................................................................................................................................................................................................................................................2218.008410021
.................................................................................................................................................................................ACAGTGAGTCTCGCGTTCTAAT.........................................................................................................................................................2218.008100061
.................................................................................................................................................................................ACAGTGAGTCTCGCGTTCT............................................................................................................................................................1917.007000034
........................................................................................TGGAATCACGACACTCACCTG...................................................................................................................................................................................................................................................2115.005400010
........................................................................................TGGAATCACGACACTCACCTGTTT................................................................................................................................................................................................................................................2415.005100022
..................................................................................................................................................................................CAGTGAGTCTCGCGTTCTAAC.........................................................................................................................................................2114.004000040
.................................................................................................................................................................................ACAGTGAGTCTCGCGTTCTAACA........................................................................................................................................................2312.002000011
........................................................................................TGGAATCACGACACTCACCTGTTAA...............................................................................................................................................................................................................................................2512.002200000
..................................................................................................................................................................................CAGTGAGTCTCGCGTTCTAA..........................................................................................................................................................2012.002000020
.................................................................................................................................................................................ACAGTGAGTCTCGCGTTCTATT.........................................................................................................................................................2212.002100010
........................................................................................TGGAATCACGACACTCACCTGTTC................................................................................................................................................................................................................................................2411.001100000
.........................................................................................GGAATCACGACACTCACCTGTTA................................................................................................................................................................................................................................................2311.001100000
.................................................................................................................................................................................ACAGTGAGTCTCGCGTTCTAAA.........................................................................................................................................................2211.001000001
.........................................................................................GGAATCACGACACTCACCTGTTAT...............................................................................................................................................................................................................................................2411.001100000
..................................................................................................................................................................................CAGTGAGTCTCGCGTTCTAACTT.......................................................................................................................................................2311.001000010
.........................................................................................GGAATCACGACACTCACCTGTT.................................................................................................................................................................................................................................................2211.001100000
.................................................................................................................................................................................ACAGTGAGTCTCGCGTTCTAACTT.......................................................................................................................................................2411.001100000
.................................................................................................................................................................................ACAGTGAGTCTCGCGTTCTAACTTT......................................................................................................................................................2511.001000010
........................................................................................TGGAATCACGACACTCACCTGTTG................................................................................................................................................................................................................................................2411.001100000
..................................................................................................................................................................................CAGTGAGTCTCGCGTTCTATT.........................................................................................................................................................2111.001000010
..................................................................................................................................................................................CAGTGAGTCTCGCGTTCTT...........................................................................................................................................................1911.001000010
droBip1
ATT---G------------------------------------------------------------------------TAGGTGAGTTGGAATCACGGTACTCACCTGTTATGCAGC-----------------------CCGCGCAAGCATCCTTGCAGACGGC-CCCCCAAATAACAGTGAGTATTGCGTTCTAGCTCAAATGCATGTTTAGATCGCTTGTCCAGGTCCCA--GATGTTAGACGTGTAATCTCAAGTGAAAGCA-------------------------------------------C----------------------------------------CSizeHit CountTotal NormTotal
No Reads
droKik1
AAATATCTAT-------C-TATCTAACTA----ACTTTCTATCTAACTATATTTATTGGTAGCTATCCATCAAAATTTACTATC--TTTGGCAGTATGCATCTTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT----------------------------------------TSizeHit CountTotal NormTotal
No Reads
droFic1
TAT---CGATCT---ATC-TATCTATCTA----TT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------ATCTAT-----------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TAATTG---AAA---ATT-AATAAATTAA----TT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSizeHit CountTotal NormTotal
No Reads
droBia1
CTTTTT--AT---ATATT-TATCTATCTA----TGAATCTTTT------------------------TAT---------------------------------------------------------------AA---------T----------------------------------------------------------------------TT---------------------------------------------------------------------------TAATT--------ATGAAT----------------------------------------CSizeHit CountTotal NormTotal
No Reads
droTak1
CTATCT--AT---C-----TATCTATC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------ATCAAT----------------------------------------ASizeHit CountTotal NormTotal
No Reads
droEug1
TAT---CTGTCG---ATA-TGTCTGTCTG----TAAATCTGTCGATATG----------------TCTGTC------------------------------------------------------------------------------------------------------------T----G------------------------------TA---------------------------------------------------------------------------AATCT--------GTCGAT--------------------------------------CTGSizeHit CountTotal NormTotal
No Reads
dm3
CTATCG--AT---CGATC-TATCGATCTA----TCGATCTATC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACCT--------ATCGAT--------------------------------------C-TSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
No Reads
droSim2
CCGTCA--AT---CAATC-----ATTTTA----GT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCAGTTTTTGTTGTTC---------------------------------------------------------------TT--------ATGAAA----------------------------------------TSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
No Reads
droSec2
GAT---CTATCT---ATC-TATCGATATA----TCTGTCTATCTATCTG----------------TCTATC------------------------------------------------------------------------------------------------------------C----A------------------------------TC---------------------------------------------------------------------------TAGCT--------ATCGAT--------------------------------------CTGSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
No Reads
droYak3
TAT---CTATCT---ATC-TATCCATAT----------------------------------CTAACTGTCAAG---------------------------------------------------------------------------------------------------------------------------------------------TG---------------------------------------------------------------------------CAACT--------GTTGAT-----------------------------------------SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
No Reads
droEre2
CAATCT--AT-----ATC-TATCTATAT----------------------------------CTATC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------ATCTAT----------------------------------------ASizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
No Reads

Generated: 10/20/2015 at 11:18 PM