ID:

dmo_2032

 Coordinate:

scaffold_6540:23056149-23056299 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-14.0 -14.0 -13.8

Flybase annnotation

CDS [Dmoj\GI10216-cds]; exon [dmoj_GLEANR_10162:2]; intron [Dmoj\GI10216-in]

Repeatable elements

NameClassFamilyStrand
(CAG)nSimple_repeatSimple_repeat+

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CCTTCGAGGCCGATCGCGAGGAGCGGGCCAAGGCGCTCAACGAGAAATATGTGAGTAACACCATCTTCAATGGCGGGCGACGCAACGAGTTGAGTGACAGCGATATGGCTCATCTGGAAGCCCAAATATTGACAAACGAAAACAAGCGACGGGTTAGCAGCAGCAGCAGCAGCAGCGGCAGGGGCAGTGGCAGCTCAGTAAGCACCACCAGCACCAGCAACAGCCCCACAGCTCTGGCCCCACAAGTGGTG
******************************************************************************************.........((......(((...(((..(((((.....(((...........))).....)))))..))).))).......)).***************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 M060
embryo
...........................................................................................................................................AAACAAGCGACGGATGAGCAGCT......................................................................................... 23 3 1 1.00 1 1 0 0
.......................................................................................................................................................GGTTAGCAGCAGCAGCAGCAGCA............................................................................. 23 0 1 1.00 1 1 0 0
.....................................................AGTAACACCATCTTCAAATG.................................................................................................................................................................................. 20 2 2 1.00 2 2 0 0
...................................................GAAGTAACACCATCTTCAA..................................................................................................................................................................................... 19 2 1 1.00 1 1 0 0
........................................................................................................................................................................GCAGCAGCGGCAGGGGCAGTGG............................................................. 22 0 1 1.00 1 0 1 0
..........................................................................................TGAGTGACAGCGATATGG............................................................................................................................................... 18 0 1 1.00 1 1 0 0
......................................................GTAACACCATCTTCAAATG.................................................................................................................................................................................. 19 2 4 0.75 3 3 0 0
......................................................................................GATTTGAGTGACAGCGTTAT................................................................................................................................................. 20 2 2 0.50 1 0 1 0
....................................................GAGTAACACCATCTTCAAATGA................................................................................................................................................................................. 22 3 2 0.50 1 1 0 0
...................................................GAAGTAACACCATCTTCAAA.................................................................................................................................................................................... 20 3 6 0.17 1 1 0 0
..................................................TGAAGTAACACCATCTTCAA..................................................................................................................................................................................... 20 3 15 0.07 1 1 0 0
.........................................................................................................................................................TTAGCAGCAGCAGCAGCAGC.............................................................................. 20 0 20 0.05 1 0 0 1
..........................................................................................................................................................TAGCAGCAGCAGCAGCAGCAGC........................................................................... 22 0 20 0.05 1 0 0 1

Anti-sense strand reads

GGAAGCTCCGGCTAGCGCTCCTCGCCCGGTTCCGCGAGTTGCTCTTTATACACTCATTGTGGTAGAAGTTACCGCCCGCTGCGTTGCTCAACTCACTGTCGCTATACCGAGTAGACCTTCGGGTTTATAACTGTTTGCTTTTGTTCGCTGCCCAATCGTCGTCGTCGTCGTCGTCGCCGTCCCCGTCACCGTCGAGTCATTCGTGGTGGTCGTGGTCGTTGTCGGGGTGTCGAGACCGGGGTGTTCACCAC
*****************************************************************************.........((......(((...(((..(((((.....(((...........))).....)))))..))).))).......)).****************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 V056
head
 V049
head
....................................................TTCATTGTGGTAGAAGTTT.................................................................................................................................................................................... 19 2 3 1.33 4 4 0 0 0
...................................................CTTCATTGTGGTAGAAGTT..................................................................................................................................................................................... 19 2 1 1.00 1 1 0 0 0
.....................................................TCATTGTGGTAGAAGTTTAC.................................................................................................................................................................................. 20 2 2 1.00 2 2 0 0 0
.....................................................TCATTGTGGTAGAAGTTTA................................................................................................................................................................................... 19 2 3 1.00 3 2 1 0 0
................................CGCGAGTTCCTCTCTACACA....................................................................................................................................................................................................... 20 3 6 0.17 1 0 0 1 0
...................................................CTTCATTGTGGTAGAAGTTT.................................................................................................................................................................................... 20 3 6 0.17 1 1 0 0 0
........................................................................................................................................................................................................................................AGACCGGGGAGTTCCTCAC 19 3 7 0.14 1 0 0 0 1
......................................................CATTGTGGTAGAAGTTTA................................................................................................................................................................................... 18 2 10 0.10 1 1 0 0 0
..................................................ACTTCATTGTGGTAGAAGTT..................................................................................................................................................................................... 20 3 15 0.07 1 1 0 0 0
......................................................................................................................................................................................................GTTCGTGGTGGTCGGGGT................................... 18 2 20 0.05 1 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6540:23056099-23056349 + dmo_2032 CCTTCGAG---GC----------CGATCG---------------CGAGGAGCGGGCCAAGGCGCTC--AACGAGA-AATATGTGAGTAACACCATCT--TCAATGGCGGGCGACGCAACGAGTTGAGTGACAGCGATATGGCTCATCTGGAAGCCCAAATATTGACA-----------------------AACGA---------------------------AAACAAGCGACGGGT---TAGCAGCAGCAG--------C------------------------------AGCAGCAGCGGCAG--------------------------------GGGCAGTGGCAGCTCAGTAAGCACC------ACCAGCACCAGCAACAGCCCCACA------GCTCTGGCC-------------------CCACAAG-TGG-----------TG-
droVir3 scaffold_12855:7835606-7835826 + dvi_4399 CCG---------T----------CGATAC---------------CGAGCAGCGCTCCAAGCTGCTC--AACGACA-AATACGTGAGTAACAGCATCT--TCAATGGCGGGCAGCGGAACGAATTGAGCGACAGTGAAATGGCTCAGTTGGAAGCGCAAATTTTAACA-----------------------AC---GGA---------------------CGCGAACAGGCGACGGGTGGGCAGCTCCA-----------------------GCTC---------------AGAC------ACCAGCT---------------------------------------------------------------------------CAGTCACCAG------CACCAGCAC------AACAGTTATACCCTCACCAGCGG------------AA-
droGri2 scaffold_15074:4400751-4400935 + CCAGCGAC---AT----------GGAGCC---------------GGAGCAGCGCTCGAAGGCGCTC--AATGACA-AATATGTGAGTAACAGCATCT--TCAATGGCGGCAAACGCAACGAACTCACCGACACTGAAATGGCCAACCTAGAGGCACAAATATTGACA-----------------------AC---GGT---------------------GCCCAGTAGACGA-----------------------------------------------------------------------------------------------------------------------------------------------CCCACAACAACCAGCAG------CCCCCCGCT------GAC------------------CG------------AG-
droWil2 scf2_1100000004943:12858431-12858659 + GAATCGAA---CAAT--------TGATGA---------------TGATGAGCGGTCGAAGGTGTTG--AATGAGA-AATATGTGAGTAACAGCATCT--TTAATCGTGGCCAACGCAATGAGTTAAGCGACCAAGAAATGGCCCGCCTGGAAGCGCAAATTTTAACA-----------------------GGAATCGGTTCTTCTTTGGCATCGGGTTCAAATAGCAAGCGAAAGGT---CAGCAAGGTCAA-------------------------------------------------------------------------------------------------------------------------------CAGCGGTAGTCGA------TCTGAATCC------ACT---------------AA-TGAGC---------CG-
dp5 Unknown_group_82:29991-30212 - CCCCCGAG---GC----------CGAATG---------------GCAGCGGCGGCTGCAGCAGGCC--GATGAGGAGGAAGGCGAGTTGTGGCAGCC--TACG-------------------------------------------------CCACCGGCCGAGGACAACGAGGGCCCCGAGAGGCGGCAACCGC---------------------------------------------AGGCCGAGGAGGAGCAGCAGCAGCAGCACCCGCAG---------------CCGCGGCACCAGCAGCAGCAGCAGCACC-----------------AGCAGCAGCAGCAGCACCAGCAGCAGC------AGCAGCACCAGCAGCAGT-----------------------------------------------------------------
droPer2 scaffold_3:4502131-4502435 + CCT---------C----------GGATCC---------------GGCGGAGCGGGCCCGGCTGCTG--AACGAGA-AATACGTGAGTAACAGCATCT--TCAATGGCGGGCAGAGGAACGAGCTGAGTGACTCCGAAATGGCCAATCTGGAGGCTCAAATACTCACG-----------------------GGCGTGGG---------------------GCCAACGAAGCGGAAAGT---CAGCCTGAATAAGTCCGCTGCTC---CTCCAGCTACCACCACTCCAGCTTCTGCCTCTCCTCTGGCT--------------------------------GGTGATCCTGCTCCTGCTGCTCCTGCCCTGTTGGCCACCATAACAGTCTCCGATTGGAAGCCAACGCC------ACC------------------TGGGCCCGGGCCTGGG-
droAna3 scaffold_13340:23256685-23256956 - CCGGAGGC---GA----------AGATCC---------------GGGCGAGAAGGCGCGACTCCTC--AACGAGA-AATACGTGAGTAACCACATCT--TCAATGGCGGGCAGAGGAACGAGCTAACCGACGCGGAAATGGCTAACCTGGAGTCACAGATTATTACG-----------------------GGTCTGGG---------------------CCCAATGAAACGAAAGGT---CAGCCCAAACCAATCCGCTCCTGC---TCCGGCTC---------------CGACTGCTCCGCCTGCT--------------------------------GAAGCTGCAGCACCTTC---ACCGGCCATTCTCACCTCCATCACGGTCTCCAA------GTGGA---C------ACC------------------AG------------AG-
droBip1 scf7180000396395:258207-258487 - CCGGCGGC---GA----------AGATCC---------------CGCGGAGAGGGCGAGGCTCCTA--AACGAGA-AATACGTGAGTAACAGCATCT--TCAATGGCGGGAAGAGGAACGAGCTAACCGACGCGGAGATGGCTAACCTGGAATCCCAGATTATCACG-----------------------GGTCTGGG---------------------CCCAATGAAGCGAAAGGT---CAGCCCGAACCAGTCTGCTCCAGC---TCCTGCTC---------------CTGC---TGCTCCTGCTGCTCCTAC---TGCCGC-----------------TGCTGAAGCTCCGG---CCAT------TCTCACCTCCATCACGGTATCCAAGTGGACAC---CGAC------ACC-------------------GG-----------AG-
droKik1 scf7180000302707:169964-170244 - TTGGTG------G----------AGAACC---------------GGAGGATAAGGCACGGCTGCTC--AACGAGA-AATACGTGAGTAACAGCATTT--TCAATGGCGGTCAACGAAACGAGCTGACCGATGCGGAAATGGCTAATCTAGAATCCCAGATTCTGACT-----------------------AACCTGGG---------------------CCCCATGAAACGGAAGGT---CAGCCTGACTAAATCCGCTCCTGCTGCTCCTTCTG---------------CTGC------------TGCTGGGG---C--------TTCTCCTTCCGCTGATTCCGACGCTCCTA------T------ATCAACGTCCATAACAGTCACCAA------ATGGACTCCGCCAGCACC------------------TGA-----------A--
droFic1 scf7180000453850:442333-442600 - CCGGGGAT---CC----------GGATCG---------------GGCGGAGAAGGCTCGCCGGCTC--AACGAGA-AATACGTGAGTAACAGCATCT--TCAACGGCGGCCAGAGGAACGAGCTGAGCGACGCCGAGATGGCCAATCTGGAGTCCCAGATTCTGACT-----------------------AACCTGGC---------------------TCCCGCGAGGCGGAAGGT---CAGCCCCAGTCAGTCCGCTCCT---------GCTG---------------CCGCATCTCCCCCTGCT--------------------------------GACTCTGCGGCTCCTGTTGCCAT------GACCGCTACCATAACGGTCACCAA------GCTCAGTCC------ACC------------------TGA-----------AGT
droEle1 scf7180000491104:2898490-2898759 - CCG---------G----------CGATCC---------------GGCGGAGAAGGCACGTCTGCTC--AACGAGA-AATACGTGAGTAATAGCATCT--TCAATGGCGGTCAAAGGAACGAGCTGAGCGACACCGAGATGGCCCATCTTGAGTCCCAGATTCTGACT-----------------------AACCTGGG---------------------CCCCATGAAAAGGAAGGT---CAGTGTGACCAAGTCCGCTCCTGCGGCTCCTGCTG---------------CTGCCGCTTCTCCTGTT--------------------------------GATTCCGCAGCTCCTGTTGCCAT------AGACGCTTCCATTACGATGACGAA------GCTGAGTCC------ACC------------------TGA-----------AG-
droRho1 scf7180000777712:2563-2832 - CGG---------G----------AGATCC---------------GGCGGAGAAAGCTCGGCTGCTT--AACGAGA-AATACGTGAGTAACAGCATCT--TCAATGGCGGTCAAAGGAACGAGCTGAGCGACGCAGAGATGGCCAATCTTGAGTCCCAGATTCTTACT-----------------------AACCTGGG---------------------CCCTATGAAACGAAAGGT---CAGCCTGACTAAGTCCGCTCCTGCGGCTCCTGCTG---------------CGGAGGCTTCTCCTGCT--------------------------------GAATCCGCAGCTCCTGCTGCCAT------GTTTGCTTCCATAACAGTCACCAA------GCTAAGTCC------ACC------------------TGA-----------AG-
droBia1 scf7180000302411:817802-818086 - CCG---------G----------AGATCC---------------AGGGGAGAAGGCTCGGCTGCTC--AACGAGA-AATACGTGAGTAATACCATCT--TCAATGGCGGTCAAAGGAACGAGCTGAGCGACGCAGAGATGGCCAATCTGGAGTCTCAGATACTGACT-----------------------AACCTGGG---------------------ACCTATGAAGCGGAAGGT---CAGCGCGACCAAAACCGCTCCGGCGGCTCCTGCTG---------------CTGCGCCCTCTCCTGCTGCGCCCGCTCC-----------------CACTGATTCCGACGCTGCGGTCGCCAT------AACCGCCTCTATAACAGTCACCAA------GCTTAGAAC------ACC------------------TGA-----------AG-
droTak1 scf7180000415789:846270-846536 - CCG---------G----------AGATCC---------------GGCGGAGAAGGCGCGGCTGCTC--AACGAGA-AATACGTGAGTAATAGCATCT--TCAATGGCGGTCAAAGGAACGAGCTGAGCGACGCCGAGATGGCCAATCTGGAGTCTCAGATACTGACT-----------------------AACCTGGG---------------------ACCTATGAAGCGGAAGGT---CAGCCTGACCAAATCCGCTCCAGCGGCTCCTGCTG---------------CCGCGTCCCCTCCTGCTGCGTCT-----------------------------------GCTCCTGTGGCCAT------AACCGCTTCAATCACAGTCACCGA------GCTTGGTCC------ACC------------------TGA-----------AG-
droEug1 scf7180000409759:1037499-1037762 - ACG---------G----------AGATCC---------------AGGAGAGAAAGCACGTCTGCTG--AACGAAA-AATACGTGAGTAATAACATCT--TCAATGGCGGTCAAAGGAACGAGCTGAGCGACGCAGAGATGGCCAATCTGGAGTCCCAGATCATTACT-----------------------AACCTTGG---------------------GCCCATGAAGCGGAAGGT---CAGCCTGACCAAATCCGTTCCAAC---------TG---------------TTGCGTCCCCTCCTGCTGCAG-----------------CTGCTCCTAGTGATACCTTGGCTCCTGTTGC------------------CATAACAGTCGTCCA------GTTAGGTCC------ACC------------------TGA-----------AG-
dm3 chr3R:1069304-1069612 - ACTCGGTGGCCGG----------AGATCC---------------GGCAGAGAAGGCGCGACTGCTT--AACGAGA-AATATGTGAGTAATAGCATCT--TTAATGGCGGTCAGAGGAAAGAACTGAGCGACGCAGAGATGGCCAATCTGGAGTCACAGATACTCACT-----------------------AACCTGGG---------------------ACCTATGAGGCGGAAGGT---CAGTCTGACCAAAACCGCTTCAGCGGCTCCTGTTC---------------GTGCACCTTCTCCTGCTGCTCCTTCTCCTGCCGAGG--CTGCCCCTCTGGATTCGGCAGCTCCTGCTGTATT------AACCGCATCTATAGCAGTCACCAA------GCTTAGTCC------ACC------------------TGA-----------CG-
droSim2 3r:975997-976296 - dsi_28105 CCG---------G----------AGATCC---------------GGCAGAGAAGGCCCGACTGCTT--AACGAGA-AATACGTGAGTAATAGCATCT--TTAATGGCGGTCAGAGGAAAGAACTGAGCGACGCAGAGATGGCCAATCTGGAGTCACAGATACTCACT-----------------------AACCTGGG---------------------ACCTATGAGGCGGAAGGT---CAGTCTGACCAAATCCGCTCCAGCGACTCCTGTTC---------------CTGCACCTTCTCCTGCTGCTCCTTCTCCTGCCGATG--CTGCCCCTCTGGATTCCGCAGCTCCTGTTGAATT------AACCGCATCCATAACAGTCACCAA------GCTTAGTCC------ACC------------------TGA-----------CG-
droSec2 scaffold_6:1193153-1193452 - CCG---------G----------AGATCC---------------GGCAGAGAAGGCCCGTCTGCTT--AACGAGA-AATACGTGAGTAATAGCATCT--TTAATGGCGGTCAGAGGAAAGAACTGAGCGACGCAGAGATGGCCAATCTGGAGTCACAGATACTCACT-----------------------AACCTGGG---------------------ACCTATGAGGCGGAAGGT---CAGTCTGACCAAATCCGCTCCAGCGACTCCTGTTC---------------CTGCACCTTCTCCTGCTGCTCCTTCTCGTGCCGATG--CTGCCCCTCTGGATTCCGCAGCTCCTGTTGTATT------AACCGCATCCATAACAGTCACCAA------GCTAAGTCC------ACC------------------TGA-----------CG-
droYak3 v2_chrUn_788:1071-1304 - CCATCATAGCTG-CTTGCCCAGCACGGGCGGCAGCGGAGGCAACTGT-----GG--CAGTGGCAAC--AGCAGGT-GTAGCGACAGGGGCAGCAACA--GGGGCAGCAGCAGGGGCAGCAGCAGGGGCAGCAGCAGGGGCAACA--------------------------------------------------------------------------------------GCAGGGG---CAGCAGCAGGGG--------C------------------------------AGCAGCAGGGGCAGCAGCAGTGGCAGC--------------------------------AGCAGGGGCAGC------AGCAGTGGCAGCAGTAGTGGCA--------GCAGTAGTG-------------------GCAGCAGTAGT-----------GG-
droEre2 scaffold_4690:490508-490725 + CAG---------T----------GGCGGC---------------GGCGCTGGTGGCCCGGGGCCACAGAA---CT-CGCCCGTAAGCTTGGGTATCATCTCGCCGACGGGCAGCGATATGGGCATT--------------------ATGCTCGCCCCGCCGCAAT------------------------------------------------------CCTCGAAGAGCAGTGCAA---TAATGCAAACGATATCACCCCAGCAACAGCAGCAG---------------CAGCAGCAACAGCAGCAGCAGCAG--------------------------------CAACAGCAGCAGCAAC------ATCAGCAGCAGCAACAGC-----------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
CCTTCGAG---GC----------CGATCG---------------CGAGGAGCGGGCCAAGGCGCTC--AACGAGA-AATATGTGAGTAACACCATCT--TCAATGGCGGGCGACGCAACGAGTTGAGTGACAGCGATATGGCTCATCTGGAAGCCCAAATATTGACA-----------------------AACGA---------------------------AAACAAGCGACGGGT---TAGCAGCAGCAG--------C------------------------------AGCAGCAGCGGCAG--------------------------------GGGCAGTGGCAGCTCAGTAAGCACC------ACCAGCACCAGCAACAGCCCCACA------GCTCTGGCC-------------------CCACAAG-TGG-----------TG-SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................................................................................................................................................................................................GGT---TAGCAGCAGCAG--------C------------------------------AGCAGCA.........................................................................................................................................................2311.001100000
....................................................................................................................................................................................................................................................................................................GCAGCAGCGGCAG--------------------------------GGGCAGTGG.........................................................................................................2211.001000001
...........................................................................................................................TGAGTGACAGCGATATGG......................................................................................................................................................................................................................................................................................................................1811.001100000
............................................................................................................................................................................................................................................T---TAGCAGCAGCAG--------C------------------------------AGCAGC..........................................................................................................................................................20200.051000010
................................................................................................................................................................................................................................................TAGCAGCAGCAG--------C------------------------------AGCAGCAGC.......................................................................................................................................................22200.051000010
droVir3
CCG---------T----------CGATAC---------------CGAGCAGCGCTCCAAGCTGCTC--AACGACA-AATACGTGAGTAACAGCATCT--TCAATGGCGGGCAGCGGAACGAATTGAGCGACAGTGAAATGGCTCAGTTGGAAGCGCAAATTTTAACA-----------------------AC---GGA---------------------CGCGAACAGGCGACGGGTGGGCAGCTCCA-----------------------GCTC---------------AGAC------ACCAGCT---------------------------------------------------------------------------CAGTCACCAG------CACCAGCAC------AACAGTTATACCCTCACCAGCGG------------AA-SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................AACAGTTATACCCTCACCAGC.................2111.001000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................ATTGAGCGACAGTGAAATGGCT....................................................................................................................................................................................................................................................................................................................2211.001000000000000100000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................AGAC------ACCAGCT---------------------------------------------------------------------------CAGTCACCAG------CAC..................................................2411.001000000000000000001000000000000000000000000000000000000000000000
.....................................................................................GTAACAGCATCT--TCAATGGCGGG.....................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000001000
droGri2
CCAGCGAC---AT----------GGAGCC---------------GGAGCAGCGCTCGAAGGCGCTC--AATGACA-AATATGTGAGTAACAGCATCT--TCAATGGCGGCAAACGCAACGAACTCACCGACACTGAAATGGCCAACCTAGAGGCACAAATATTGACA-----------------------AC---GGT---------------------GCCCAGTAGACGA-----------------------------------------------------------------------------------------------------------------------------------------------CCCACAACAACCAGCAG------CCCCCCGCT------GAC------------------CG------------AG-SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
....................................................................................................CAATGGCGGCAAACGCAACGAACT.......................................................................................................................................................................................................................................................................................................................................2411.00110
droWil2
GAATCGAA---CAAT--------TGATGA---------------TGATGAGCGGTCGAAGGTGTTG--AATGAGA-AATATGTGAGTAACAGCATCT--TTAATCGTGGCCAACGCAATGAGTTAAGCGACCAAGAAATGGCCCGCCTGGAAGCGCAAATTTTAACA-----------------------GGAATCGGTTCTTCTTTGGCATCGGGTTCAAATAGCAAGCGAAAGGT---CAGCAAGGTCAA-------------------------------------------------------------------------------------------------------------------------------CAGCGGTAGTCGA------TCTGAATCC------ACT---------------AA-TGAGC---------CG-SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................................................................................................................................................................TTTAACA-----------------------GGAATCGGTTCTTCTTTGGC.................................................................................................................................................................................................................................................2711.00100010
................................................................................................................................................................TTTAACA-----------------------GGAATCGGTTCTT........................................................................................................................................................................................................................................................2011.00100100
.......................................................................................................................................................................................................................GTTCAAATAGCAAGCGAAAGGT---C..................................................................................................................................................................................................................2311.00100010
....................................................................................................................................................................................................................................................AAGGTCAA-------------------------------------------------------------------------------------------------------------------------------CAGCGGTAGTCGA------.....................................................2111.00100001
................................................................................................................................................................................................AATCGGTTCTTCTTTGGC.................................................................................................................................................................................................................................................1811.00100010
dp5
CCCCCGAG---GC----------CGAATG---------------GCAGCGGCGGCTGCAGCAGGCC--GATGAGGAGGAAGGCGAGTTGTGGCAGCC--TACG-------------------------------------------------CCACCGGCCGAGGACAACGAGGGCCCCGAGAGGCGGCAACCGC---------------------------------------------AGGCCGAGGAGGAGCAGCAGCAGCAGCACCCGCAG---------------CCGCGGCACCAGCAGCAGCAGCAGCACC-----------------AGCAGCAGCAGCAGCACCAGCAGCAGC------AGCAGCACCAGCAGCAGT-----------------------------------------------------------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............................................................................................CAGCC--TACG-------------------------------------------------CCACCGGCCGAGGA.............................................................................................................................................................................................................................................................................................23155.077607600000000
............................................................................................CAGCC--TACG-------------------------------------------------CCACCGGCCGAGG..............................................................................................................................................................................................................................................................................................22154.737107010000000
............................................................................................CAGCC--TACG-------------------------------------------------CCACCGGCCGAG...............................................................................................................................................................................................................................................................................................21151.131701700000000
............................................................................................CAGCC--TACG-------------------------------------------------CCACCGGCCGAGGAC............................................................................................................................................................................................................................................................................................2471.0070700000000
............................................................................................CAGCC--TACG-------------------------------------------------CCACCGGCCGA................................................................................................................................................................................................................................................................................................20150.3350500000000
............................................................................................................................................................................................CAACCGC---------------------------------------------AGGCCGAGGAGGAGC....................................................................................................................................................................................................2240.2510100000000
............................................................................................................................................................................................CAACCGC---------------------------------------------AGGCCGAGGAGG.......................................................................................................................................................................................................1940.2510100000000
..................................................................................................................................................................................CGAGAGGCGGCAACCGC---------------------------------------------AGGC...............................................................................................................................................................................................................2150.2010100000000
..........................................................................GAGGAAGGCGAGTTGTGG.......................................................................................................................................................................................................................................................................................................................................................................1850.2010100000000
..................................................................................................................................................................................................................................................GCCGAGGAGGAGCAGCAGCAGCAG.........................................................................................................................................................................................2450.2010100000000
.............................................................................................AGCC--TACG-------------------------------------------------CCACCGGCCGAG...............................................................................................................................................................................................................................................................................................20150.2030300000000
............................................................................................CAGCC--TACG-------------------------------------------------CCACCGGCCG.................................................................................................................................................................................................................................................................................................19150.2030300000000
.............................................................................................AGCC--TACG-------------------------------------------------CCACCGGCCGAGGA.............................................................................................................................................................................................................................................................................................22150.2030300000000
....................................................................................................................................................................................................................................................CGAGGAGGAGCAGCAGCAGCAGCACC.....................................................................................................................................................................................2660.1710100000000
....CGAG---GC----------CGAATG---------------GCAGCGGCG..............................................................................................................................................................................................................................................................................................................................................................................................................21200.1530300000000
....CGAG---GC----------CGAATG---------------GCAGCGGC...............................................................................................................................................................................................................................................................................................................................................................................................................20200.1530300000000
.............................................................................................AGCC--TACG-------------------------------------------------CCACCGGCCGAGGAC............................................................................................................................................................................................................................................................................................2370.1410100000000
................................................................................................................................................................................................................................................AGGCCGAGGAGGAGCAGCAG...............................................................................................................................................................................................2070.1410100000000
................................................................................................................................................................................................CGC---------------------------------------------AGGCCGAGGAGGAGCAGC.................................................................................................................................................................................................2170.1410100000000
.........................................................................................................................................................................................................................................................AGGAGCAGCAGCAGCAGCACC.....................................................................................................................................................................................21140.1420200000000
................................................................................................................................................................................................CGC---------------------------------------------AGGCCGAGGAGGAGCAGCA................................................................................................................................................................................................2270.1410100000000
.............................................................................................AGCC--TACG-------------------------------------------------CCACCGGCCGAGG..............................................................................................................................................................................................................................................................................................21150.1320200000000
.........................................................................................................................................................................................................................................................AGGAGCAGCAGCAGCAGCAC......................................................................................................................................................................................20190.1120200000000
....CGAG---GC----------CGAATG---------------GCAGCGG................................................................................................................................................................................................................................................................................................................................................................................................................19200.1020200000000
.......................................................................................TGTGGCAGCC--TACG-------------------------------------------------CCACCGGCCG.................................................................................................................................................................................................................................................................................................24140.0710100000000
............................................................................................CAGCC--TACG-------------------------------------------------CCACCGGCCGC................................................................................................................................................................................................................................................................................................20150.0710100000000
............................................................................................CAGCC--TACG-------------------------------------------------CCACCGGCCGAGC..............................................................................................................................................................................................................................................................................................22150.0710010000000
.............................................................................................AGCC--TACG-------------------------------------------------CCACCGGCCGA................................................................................................................................................................................................................................................................................................19150.0710100000000
............................................................................................CAGCC--TACG-------------------------------------------------CCACCGGCCGAGGAA............................................................................................................................................................................................................................................................................................24150.0710100000000
............................................................................................CAGCC--TACG-------------------------------------------------CCACCGGCCGAC...............................................................................................................................................................................................................................................................................................21150.0710100000000
..............................................................................................GCC--TACG-------------------------------------------------CCACCGGCCGAGG..............................................................................................................................................................................................................................................................................................20160.0610100000000
..............................................................................................GCC--TACG-------------------------------------------------CCACCGGCCGAGGA.............................................................................................................................................................................................................................................................................................21160.0610100000000
...............................................................................................CC--TACG-------------------------------------------------CCACCGGCCGAG...............................................................................................................................................................................................................................................................................................18160.0610100000000
...CCGAG---GC----------CGAATG---------------GCAGCGG................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
.........................................................................................................................................................................................................................................................................................................ACCAGCAGCAGCAGCAGCACC-----------------....................................................................................................................21200.0510100000000
......................................................................................................................................................................................................................................................AGGAGGAGCAGCAGCAGCAG.........................................................................................................................................................................................20200.0510100000000
...CCGAG---GC----------CGAATG---------------GCAGCG.................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000000
droPer2
CCT---------C----------GGATCC---------------GGCGGAGCGGGCCCGGCTGCTG--AACGAGA-AATACGTGAGTAACAGCATCT--TCAATGGCGGGCAGAGGAACGAGCTGAGTGACTCCGAAATGGCCAATCTGGAGGCTCAAATACTCACG-----------------------GGCGTGGG---------------------GCCAACGAAGCGGAAAGT---CAGCCTGAATAAGTCCGCTGCTC---CTCCAGCTACCACCACTCCAGCTTCTGCCTCTCCTCTGGCT--------------------------------GGTGATCCTGCTCCTGCTGCTCCTGCCCTGTTGGCCACCATAACAGTCTCCGATTGGAAGCCAACGCC------ACC------------------TGGGCCCGGGCCTGGG-SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........................................................................................................................................................................................................................................................................................................TCCTCTGGCT--------------------------------GGTGATCCTGCTCC..................................................................................................2411.001100000
.....................................................................................GTAACAGCATCT--TCAATGGCGGGC....................................................................................................................................................................................................................................................................................................................................................2411.001001000
droAna3
CCGGAGGC---GA----------AGATCC---------------GGGCGAGAAGGCGCGACTCCTC--AACGAGA-AATACGTGAGTAACCACATCT--TCAATGGCGGGCAGAGGAACGAGCTAACCGACGCGGAAATGGCTAACCTGGAGTCACAGATTATTACG-----------------------GGTCTGGG---------------------CCCAATGAAACGAAAGGT---CAGCCCAAACCAATCCGCTCCTGC---TCCGGCTC---------------CGACTGCTCCGCCTGCT--------------------------------GAAGCTGCAGCACCTTC---ACCGGCCATTCTCACCTCCATCACGGTCTCCAA------GTGGA---C------ACC------------------AG------------AG-SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................CT--TCAATGGCGGGCAGAG................................................................................................................................................................................................................................................................................................................................................1811.001100000
...................................................................................................................................................................................................................................................................................................................................................................................CACCTCCATCACGGTCTCCAA------.....................................................2111.001100000
.................................................AGAAGGCGCGACTCCTC--AACGAGA-A......................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
........................................................................................................GGCGGGCAGAGGAACGAGCTAACCG..................................................................................................................................................................................................................................................................................................................................2511.001000100
droBip1
CCGGCGGC---GA----------AGATCC---------------CGCGGAGAGGGCGAGGCTCCTA--AACGAGA-AATACGTGAGTAACAGCATCT--TCAATGGCGGGAAGAGGAACGAGCTAACCGACGCGGAGATGGCTAACCTGGAATCCCAGATTATCACG-----------------------GGTCTGGG---------------------CCCAATGAAGCGAAAGGT---CAGCCCGAACCAGTCTGCTCCAGC---TCCTGCTC---------------CTGC---TGCTCCTGCTGCTCCTAC---TGCCGC-----------------TGCTGAAGCTCCGG---CCAT------TCTCACCTCCATCACGGTATCCAAGTGGACAC---CGAC------ACC-------------------GG-----------AG-SizeHit CountTotal NormTotal
No Reads
droKik1
TTGGTG------G----------AGAACC---------------GGAGGATAAGGCACGGCTGCTC--AACGAGA-AATACGTGAGTAACAGCATTT--TCAATGGCGGTCAACGAAACGAGCTGACCGATGCGGAAATGGCTAATCTAGAATCCCAGATTCTGACT-----------------------AACCTGGG---------------------CCCCATGAAACGGAAGGT---CAGCCTGACTAAATCCGCTCCTGCTGCTCCTTCTG---------------CTGC------------TGCTGGGG---C--------TTCTCCTTCCGCTGATTCCGACGCTCCTA------T------ATCAACGTCCATAACAGTCACCAA------ATGGACTCCGCCAGCACC------------------TGA-----------A--SizeHit CountTotal NormTotal
No Reads
droFic1
CCGGGGAT---CC----------GGATCG---------------GGCGGAGAAGGCTCGCCGGCTC--AACGAGA-AATACGTGAGTAACAGCATCT--TCAACGGCGGCCAGAGGAACGAGCTGAGCGACGCCGAGATGGCCAATCTGGAGTCCCAGATTCTGACT-----------------------AACCTGGC---------------------TCCCGCGAGGCGGAAGGT---CAGCCCCAGTCAGTCCGCTCCT---------GCTG---------------CCGCATCTCCCCCTGCT--------------------------------GACTCTGCGGCTCCTGTTGCCAT------GACCGCTACCATAACGGTCACCAA------GCTCAGTCC------ACC------------------TGA-----------AGTSizeHit CountTotal NormTotal
No Reads
droEle1
CCG---------G----------CGATCC---------------GGCGGAGAAGGCACGTCTGCTC--AACGAGA-AATACGTGAGTAATAGCATCT--TCAATGGCGGTCAAAGGAACGAGCTGAGCGACACCGAGATGGCCCATCTTGAGTCCCAGATTCTGACT-----------------------AACCTGGG---------------------CCCCATGAAAAGGAAGGT---CAGTGTGACCAAGTCCGCTCCTGCGGCTCCTGCTG---------------CTGCCGCTTCTCCTGTT--------------------------------GATTCCGCAGCTCCTGTTGCCAT------AGACGCTTCCATTACGATGACGAA------GCTGAGTCC------ACC------------------TGA-----------AG-SizeHit CountTotal NormTotal
No Reads
droRho1
CGG---------G----------AGATCC---------------GGCGGAGAAAGCTCGGCTGCTT--AACGAGA-AATACGTGAGTAACAGCATCT--TCAATGGCGGTCAAAGGAACGAGCTGAGCGACGCAGAGATGGCCAATCTTGAGTCCCAGATTCTTACT-----------------------AACCTGGG---------------------CCCTATGAAACGAAAGGT---CAGCCTGACTAAGTCCGCTCCTGCGGCTCCTGCTG---------------CGGAGGCTTCTCCTGCT--------------------------------GAATCCGCAGCTCCTGCTGCCAT------GTTTGCTTCCATAACAGTCACCAA------GCTAAGTCC------ACC------------------TGA-----------AG-SizeHit CountTotal NormTotal
No Reads
droBia1
CCG---------G----------AGATCC---------------AGGGGAGAAGGCTCGGCTGCTC--AACGAGA-AATACGTGAGTAATACCATCT--TCAATGGCGGTCAAAGGAACGAGCTGAGCGACGCAGAGATGGCCAATCTGGAGTCTCAGATACTGACT-----------------------AACCTGGG---------------------ACCTATGAAGCGGAAGGT---CAGCGCGACCAAAACCGCTCCGGCGGCTCCTGCTG---------------CTGCGCCCTCTCCTGCTGCGCCCGCTCC-----------------CACTGATTCCGACGCTGCGGTCGCCAT------AACCGCCTCTATAACAGTCACCAA------GCTTAGAAC------ACC------------------TGA-----------AG-SizeHit CountTotal NormTotal
No Reads
droTak1
CCG---------G----------AGATCC---------------GGCGGAGAAGGCGCGGCTGCTC--AACGAGA-AATACGTGAGTAATAGCATCT--TCAATGGCGGTCAAAGGAACGAGCTGAGCGACGCCGAGATGGCCAATCTGGAGTCTCAGATACTGACT-----------------------AACCTGGG---------------------ACCTATGAAGCGGAAGGT---CAGCCTGACCAAATCCGCTCCAGCGGCTCCTGCTG---------------CCGCGTCCCCTCCTGCTGCGTCT-----------------------------------GCTCCTGTGGCCAT------AACCGCTTCAATCACAGTCACCGA------GCTTGGTCC------ACC------------------TGA-----------AG-SizeHit CountTotal NormTotal
No Reads
droEug1
ACG---------G----------AGATCC---------------AGGAGAGAAAGCACGTCTGCTG--AACGAAA-AATACGTGAGTAATAACATCT--TCAATGGCGGTCAAAGGAACGAGCTGAGCGACGCAGAGATGGCCAATCTGGAGTCCCAGATCATTACT-----------------------AACCTTGG---------------------GCCCATGAAGCGGAAGGT---CAGCCTGACCAAATCCGTTCCAAC---------TG---------------TTGCGTCCCCTCCTGCTGCAG-----------------CTGCTCCTAGTGATACCTTGGCTCCTGTTGC------------------CATAACAGTCGTCCA------GTTAGGTCC------ACC------------------TGA-----------AG-SizeHit CountTotal NormTotal
No Reads
dm3
ACTCGGTGGCCGG----------AGATCC---------------GGCAGAGAAGGCGCGACTGCTT--AACGAGA-AATATGTGAGTAATAGCATCT--TTAATGGCGGTCAGAGGAAAGAACTGAGCGACGCAGAGATGGCCAATCTGGAGTCACAGATACTCACT-----------------------AACCTGGG---------------------ACCTATGAGGCGGAAGGT---CAGTCTGACCAAAACCGCTTCAGCGGCTCCTGTTC---------------GTGCACCTTCTCCTGCTGCTCCTTCTCCTGCCGAGG--CTGCCCCTCTGGATTCGGCAGCTCCTGCTGTATT------AACCGCATCTATAGCAGTCACCAA------GCTTAGTCC------ACC------------------TGA-----------CG-SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................................................................................................................................................................................................................................................................................GTGCACCTTCTCCTGCTGCTC............................................................................................................................................21111.001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................GACGCAGAGATGGCCAATCTGGAGT..........................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................TGCTT--AACGAGA-AATATGTGAG.............................................................................................................................................................................................................................................................................................................................................................................2213.0030000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................TATGAGGCGGAAGGT---CAGTCT.............................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................CCCCTCTGGATTCGGCAGCTC...................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................TCAGAGGAAAGAACTGAGCGACGCAGA...........................................................................................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................ATGAGGCGGAAGGT---CAGTCTGA...........................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................AGAGGAAAGAACTGAGCGA.................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................GTATT------AACCGCATCTATAGCAGTCACCA............................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................TTCAGCGGCTCCTGTTC---------------GTGCA............................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................ATCC---------------GGCAGAGAAGGCGC.........................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................CACCTTCTCCTGCTGCTCCTTCTCC.....................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................CTGGG---------------------ACCTATGAGGCGGAAGGT---...................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................................................................................................................................................................................CAGTCTGACCAAAACCGCTTCAG............................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................CACT-----------------------AACCTGGG---------------------ACCTATGAGGC.............................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................CT-----------------------AACCTGGG---------------------ACCTATGAGG..............................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...................................................................................GAGTAATAGCATCT--TTAATGGCG.......................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................GAGATGGCCAATCTGGAGTCACAGA....................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................TCAGCGGCTCCTGTTC---------------GTGC.............................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................AACCTGGG---------------------ACCTATGAGGCGGA..........................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................T-----------------------AACCTGGG---------------------ACCTATGAGGCGGAAGG.......................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................CAGAGGAAAGAACTGAGCGACGCA.............................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................AGATCC---------------GGCAGAGAAGGC...........................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................G---------------------ACCTATGAGGCGGAAGG.......................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
................................................................................................................................................ATCTGGAGTCACAGATACTCACT-----------------------A....................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................AGAACTGAGCGACGCAGAGATGGCC....................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
.......................................................................................................TGGCGGTCAGAGGAAAGAACT.......................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.........................................................................................................GCGGTCAGAGGAAAGAACTGA.....................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
...............................................................................................................................................................................................................................ATGAGGCGGAAGGT---CAGTCT.............................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................AGTCTGACCAAAACCGCTTCAGCGGCT.......................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................GCCCCTCTGGATTCGGCAGCTCCT.................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
........................GATCC---------------GGCAGAGAAGGCGCGACTGC...................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
...............................................................................................................................................AATCTGGAGTCACAGATACTCACT-----------------------AACC.................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................CCTGTTC---------------GTGCACCTTCTCCT...................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................CTCTGGATTCGGCAGCTCCTG................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
...........................................................................................................................................................................................................................................................................TCCTGTTC---------------GTGCACCTTCTCCTGCTGC..............................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................TGAGCGACGCAGAGATGGCCAATCT...............................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................T--AACGAGA-AATATGTGAGTAATAGCA.....................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................TCTATAGCAGTCACCAA------G....................................................1811.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................GTCACCAA------GCTTAGTCC------ACC------------------TGA-----------C..2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................GAAGGCGCGACTGCTT--AACGAGA-AATATGT................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................ATGGCGGTCAGAGGAAAGAACT.......................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
..................................................................................................................................................................................................TGGG---------------------ACCTATGAGGCGGAAGGT---CA.................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................AACTGAGCGACGCAGAGAT........................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................TT--AACGAGA-AATATGTGAGTAATAG.......................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................CACT-----------------------AACCTGGG---------------------ACCTATGAGGCGGAAG........................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................GAGGAAAGAACTGAGCGACGC..............................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................T-----------------------AACCTGGG---------------------ACCTATGAGGCG............................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................CT-----------------------AACCTGGG---------------------ACCTATGAGGCGGAA.........................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................................................................................................................................GGCGGAAGGT---CAGTCTGACCAA.......................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................TGGCCAATCTGGAGTCACAG.....................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...CGGTGGCCGG----------AGATCC---------------GGC....................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................CCCTCTGGATTCGGCAGCTCCTG................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
droSim2
CCG---------G----------AGATCC---------------GGCAGAGAAGGCCCGACTGCTT--AACGAGA-AATACGTGAGTAATAGCATCT--TTAATGGCGGTCAGAGGAAAGAACTGAGCGACGCAGAGATGGCCAATCTGGAGTCACAGATACTCACT-----------------------AACCTGGG---------------------ACCTATGAGGCGGAAGGT---CAGTCTGACCAAATCCGCTCCAGCGACTCCTGTTC---------------CTGCACCTTCTCCTGCTGCTCCTTCTCCTGCCGATG--CTGCCCCTCTGGATTCCGCAGCTCCTGTTGAATT------AACCGCATCCATAACAGTCACCAA------GCTTAGTCC------ACC------------------TGA-----------CG-SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...........................................................................................................................................................................................................................ACCTATGAGGCGGAAGGT---...................................................................................................................................................................................................................1812.00220000000000000000
.................................................................................................................................................................................................................................................................CTCCAGCGACTCCTGTTC---------------CTGCAC...........................................................................................................................................................2411.00101000000000000000
...............................................................................................................AGAGGAAAGAACTGAGCGACGCAG............................................................................................................................................................................................................................................................................................................................2411.00101000000000000000
................................................................................................................................................................................................................................TGAGGCGGAAGGT---CAGTC..............................................................................................................................................................................................................1811.00100000000001000000
..............................................................................................................CAGAGGAAAGAACTGAGC...................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
..................................................................................................................................................CTGGAGTCACAGATACTC...............................................................................................................................................................................................................................................................................................1811.00101000000000000000
................................................................................................................GAGGAAAGAACTGAGCGACGCA.............................................................................................................................................................................................................................................................................................................................2211.00110000000000000000
droSec2
CCG---------G----------AGATCC---------------GGCAGAGAAGGCCCGTCTGCTT--AACGAGA-AATACGTGAGTAATAGCATCT--TTAATGGCGGTCAGAGGAAAGAACTGAGCGACGCAGAGATGGCCAATCTGGAGTCACAGATACTCACT-----------------------AACCTGGG---------------------ACCTATGAGGCGGAAGGT---CAGTCTGACCAAATCCGCTCCAGCGACTCCTGTTC---------------CTGCACCTTCTCCTGCTGCTCCTTCTCGTGCCGATG--CTGCCCCTCTGGATTCCGCAGCTCCTGTTGTATT------AACCGCATCCATAACAGTCACCAA------GCTAAGTCC------ACC------------------TGA-----------CG-SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
....................................................................................................................................................................................................GG---------------------ACCTATGAGGCGGAAGGT---C..................................................................................................................................................................................................................2111.0010100
droYak3
CCATCATAGCTG-CTTGCCCAGCACGGGCGGCAGCGGAGGCAACTGT-----GG--CAGTGGCAAC--AGCAGGT-GTAGCGACAGGGGCAGCAACA--GGGGCAGCAGCAGGGGCAGCAGCAGGGGCAGCAGCAGGGGCAACA--------------------------------------------------------------------------------------GCAGGGG---CAGCAGCAGGGG--------C------------------------------AGCAGCAGGGGCAGCAGCAGTGGCAGC--------------------------------AGCAGGGGCAGC------AGCAGTGGCAGCAGTAGTGGCA--------GCAGTAGTG-------------------GCAGCAGTAGT-----------GG-SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............TGCCCAGCACGGGCGGCAGCGG..............................................................................................................................................................................................................................................................................................................................................................................................................................22162.5641028760000000
..........TG-CTTGCCCAGCACGGGCGGCAGCGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................27140.7911000000000011
.........................................................................GT-GTAGCGACAGGGGCAGCAACA--G...............................................................................................................................................................................................................................................................................................................................................................24110.64707000000000
..............TTGCCCAGCACGGGCGGCAGCGG..............................................................................................................................................................................................................................................................................................................................................................................................................................23160.631006400000000
...............TGCCCAGCACGGGCGGCAGCGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................23160.56900900000000
....................................GAGGCAACTGT-----GG--CAGTGGCAAC--AGC............................................................................................................................................................................................................................................................................................................................................................................................26120.42501000000004
...TCATAGCTG-CTTGCCCAGCACGGGCGG....................................................................................................................................................................................................................................................................................................................................................................................................................................27130.38503100000001
.............................................................................TAGCGACAGGGGCAGCAACA--GGGGC...........................................................................................................................................................................................................................................................................................................................................................2530.33101000000000
......TAGCTG-CTTGCCCAGCACGGGCGGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................26130.23303000000000
.........................................................................GT-GTAGCGACAGGGGCAGCAACA--GG..............................................................................................................................................................................................................................................................................................................................................................25110.18202000000000
...........................................................TGGCAAC--AGCAGGT-GTAGCGACAGG............................................................................................................................................................................................................................................................................................................................................................................25120.17202000000000
...TCATAGCTG-CTTGCCCAGCACGGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................24130.15202000000000
......TAGCTG-CTTGCCCAGCACGGGCGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................25130.15200200000000
..............TTGCCCAGCACGGGCGGCAGCGGAG............................................................................................................................................................................................................................................................................................................................................................................................................................25140.14202000000000
...............TGCCCAGCACGGGCGGCAGCGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................23140.14202000000000
..............TTGCCCAGCACGGGCGGCAGCGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................24160.13200200000000
................................................................................................................................................................................................................................................................................................................GCAGCAGTGGCAGC--------------------------------AGCAGGG..............................................................................................21110.09101000000000
......................................................................CAGGT-GTAGCGACAGGGGCAGCAAC...................................................................................................................................................................................................................................................................................................................................................................25110.09100000010000
..............................GCAGCGGAGGCAACTGT-----GG--CAGTGG.....................................................................................................................................................................................................................................................................................................................................................................................................25110.09101000000000
..........................................................................T-GTAGCGACAGGGGCAGCAACA--GG..............................................................................................................................................................................................................................................................................................................................................................24110.09101000000000
....................................................................AGCAGGT-GTAGCGACAGGGGCAGCAA....................................................................................................................................................................................................................................................................................................................................................................26110.09101000000000
................................AGCGGAGGCAACTGT-----GG--CAGTG......................................................................................................................................................................................................................................................................................................................................................................................................22110.09100100000000
...................CAGCACGGGCGGCAGCGGAGGCAACTGT-----...............................................................................................................................................................................................................................................................................................................................................................................................................28110.09100000000001
.................................GCGGAGGCAACTGT-----GG--CAGTGGCAAC--...............................................................................................................................................................................................................................................................................................................................................................................................26110.09100100000000
................................................................................................................................................................................................................................................................................................................GCAGCAGTGGCAGC--------------------------------AGCAGGGG.............................................................................................22110.09101000000000
......................................................................CAGGT-GTAGCGACAGGGGCAGCAA....................................................................................................................................................................................................................................................................................................................................................................24110.09101000000000
..............................................................................................................................................................................................................................................................................................................CAGCAGCAGTGGCAGC--------------------------------AGCAGGG..............................................................................................23110.09101000000000
..............................GCAGCGGAGGCAACTGT-----GG--CAGTGGC....................................................................................................................................................................................................................................................................................................................................................................................................26110.09101000000000
................................................................AC--AGCAGGT-GTAGCGACAGGG...........................................................................................................................................................................................................................................................................................................................................................................21120.08100010000000
.............................................................GCAAC--AGCAGGT-GTAGCGACAGGGG..........................................................................................................................................................................................................................................................................................................................................................................25120.08101000000000
........................................CAACTGT-----GG--CAGTGGCAAC--AGCAGGT-G......................................................................................................................................................................................................................................................................................................................................................................................27120.08101000000000
...............................................................AAC--AGCAGGT-GTAGCGACAGGGGCAGC......................................................................................................................................................................................................................................................................................................................................................................27120.08101000000000
.............................................GT-----GG--CAGTGGCAAC--AGCAGGT-GT.....................................................................................................................................................................................................................................................................................................................................................................................23120.08101000000000
......................................GGCAACTGT-----GG--CAGTGGCAAC--AGCAGG.........................................................................................................................................................................................................................................................................................................................................................................................27120.08101000000000
..............................................T-----GG--CAGTGGCAAC--AGCAGGT-GTAGC..................................................................................................................................................................................................................................................................................................................................................................................25120.08101000000000
....................................................................AGCAGGT-GTAGCGACAGGGGCAGCA.....................................................................................................................................................................................................................................................................................................................................................................25120.08101000000000
............................................................GGCAAC--AGCAGGT-GTAGCGACAGGGG..........................................................................................................................................................................................................................................................................................................................................................................26120.08100000000001
......................................GGCAACTGT-----GG--CAGTGGCAAC--A..............................................................................................................................................................................................................................................................................................................................................................................................22120.08101000000000
...TCATAGCTG-CTTGCCCAGCACGGGCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................26130.08101000000000
.......AGCTG-CTTGCCCAGCACGGGCGGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................25130.08101000000000
...TCATAGCTG-CTTGCCCAGCACGGGCGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................28130.08101000000000
..ATCATAGCTG-CTTGCCCAGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................21130.08101000000000
...............TGCCCAGCACGGGCGGCAGCGGAGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................26130.08101000000000
..........TG-CTTGCCCAGCACGGGCGGCAGCG...............................................................................................................................................................................................................................................................................................................................................................................................................................25140.07100100000000
...............TGCCCAGCACGGGCGGCAGCGGAG............................................................................................................................................................................................................................................................................................................................................................................................................................24140.07101000000000
..........TG-CTTGCCCAGCACGGGCGGCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................24150.07101000000000
...............TGCCCAGCACGGGCGGCAGCGGG.............................................................................................................................................................................................................................................................................................................................................................................................................................23160.06100010000000
...............TGCCCAGCACGGGCGGCAGCG...............................................................................................................................................................................................................................................................................................................................................................................................................................21160.06101000000000
.............CTTGCCCAGCACGGGCGGCAGCGG..............................................................................................................................................................................................................................................................................................................................................................................................................................24160.06101000000000
..............TTGCCCAGCACGGGCGGCAGCG...............................................................................................................................................................................................................................................................................................................................................................................................................................22160.06100100000000
..............TTGCCCAGCACGGGCGGCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................21170.06101000000000
.............CTTGCCCAGCACGGGCGGCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................22170.06100100000000
.....................................................................................................GGCAGCAGCAGGGGCAGCAGCAGGGG....................................................................................................................................................................................................................................................................................................................................26200.05101000000000
...........................................................................................................................................................................................................................................................................................................................AGC--------------------------------AGCAGGGGCAGC------AGCAGTGGCAG........................................................................26200.05101000000000
..........................................................................................................................................................................................................................................................................................................................CAGC--------------------------------AGCAGGGGCAGC------AGCAGTGG...........................................................................24200.05101000000000
.................................................................................................................GGCAGCAGCAGGGGCAGCAGCAGGGG........................................................................................................................................................................................................................................................................................................................26200.05101000000000
....................................................................................................................................................................................................................................................................C------------------------------AGCAGCAGGGGCAGCAGCAGTGG.........................................................................................................................................24200.05101000000000
...........................................................................................................................................................................................................................................GG---CAGCAGCAGGGG--------C------------------------------AGCAGCAGGGG.....................................................................................................................................................26200.05101000000000
...................................................................................................................................................................................................................................................................................................AGCAGCAGGGGCAGCAGCAGTGGCAG......................................................................................................................................26200.05101000000000
droEre2
CAG---------T----------GGCGGC---------------GGCGCTGGTGGCCCGGGGCCACAGAA---CT-CGCCCGTAAGCTTGGGTATCATCTCGCCGACGGGCAGCGATATGGGCATT--------------------ATGCTCGCCCCGCCGCAAT------------------------------------------------------CCTCGAAGAGCAGTGCAA---TAATGCAAACGATATCACCCCAGCAACAGCAGCAG---------------CAGCAGCAACAGCAGCAGCAGCAG--------------------------------CAACAGCAGCAGCAAC------ATCAGCAGCAGCAACAGC-----------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................AGCAAC------ATCAGCAGCAGCAACAGC-----------------------------------------------------------------2440.2510000010
...........................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAGCAAC------ATCAGC.............................................................................2170.1410100000
..............................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAAC------ATCAGC.............................................................................18200.1020100010
..............................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAAC------ATCAGCA............................................................................19200.1022000000
..............................................................................................................................................................................................................................................................................AGCAG---------------CAGCAGCAACAGCAGCAGCA.............................................................................................................................................25200.0510001000
............................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAGCAAC------ATCA...............................................................................18200.0510000100
.......................................................................................................................................................................................................................................................................CAACAGCAGCAG---------------CAGCAGC..........................................................................................................................................................19200.0511000000
....................................................................................................................................................................................................................................................................CAGCAACAGCAGCAG---------------CAGCA............................................................................................................................................................20200.0510010000
....................................................................................................................................................................................................................................................................CAGCAACAGCAGCAG---------------CAGCAGCAACA......................................................................................................................................................26200.0511000000
...............................................................................................................................................................................................................................................................................................................AGCAGCAGCAG--------------------------------CAACAGCAGCAGCA...........................................................................................25200.0510001000
.........................................................................................................................................................................................................................................................................................................................................................................C------ATCAGCAGCAGCAACAG..................................................................18200.0510000010
........................................................................................................................................................................................................................................................................................................................AG--------------------------------CAACAGCAGCAGCAAC------A..................................................................................19200.0510001000

Generated: 05/18/2015 at 01:46 AM