ID:

dmo_2

 Coordinate:

scaffold_6540:10349286-10349352 -

 Confidence:

Known Ortholog

 Class:

Canonical miRNA

 Genomic Locale:

intergenic

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-34.0

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

TTACCTTGAATTTCTGACAAAAAACAGAAAACAAAAAACATATTGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGGTTGTGTCCGCAATGCCTCCTGCTGCCCAAGTGCTTATCAAAGCGACGAGTTTTTCAACAGCAGCAATTAAACAAAATTACTAATTTTTT

***********************************((((...(((((((..((((((((...((.(((((((.....(((((....)))))..))))))).))...))))))))..)))))))...))))..*********************************** 		Read size # Mismatch Hit Count Total Norm Total M046

female body

 M060

embryo

 V056

head

 V049

head

 V110

male body		 V041

embryo
..................................................CTAAGTACTAGTGCCGCAGGAG............................................................................................... 22 0 1 249513.00 249513 143954 31271 33607 23988 9232 7461
..................................................CTAAGTACTAGTGCCGCAGGA................................................................................................ 21 0 1 66586.00 66586 55369 2885 3779 3103 1183 267
...................................................TAAGTACTAGTGCCGCAGGAG............................................................................................... 21 0 1 11590.00 11590 10399 160 483 347 114 87
..................................................CTAAGTACTAGTGCCGCAGGAGT.............................................................................................. 23 0 1 7470.00 7470 4673 1232 713 468 194 190
..................................................CTAAGTACTAGTGCCGCAGG................................................................................................. 20 0 1 4788.00 4788 3856 251 321 273 80 7
..................................................CGAAGTACTAGTGCCGCAGGAG............................................................................................... 22 1 1 4453.00 4453 2 4399 32 17 0 3
...................................................TAAGTACTAGTGCCGCAGGA................................................................................................ 20 0 1 3796.00 3796 3717 30 21 21 6 1
..................................................CTAAGTACTAGTGCCGCAGGAC............................................................................................... 22 1 1 1627.00 1627 183 1347 57 30 6 4
..................................................CTAAGTACTAGTGCCGCAGGAA............................................................................................... 22 1 1 1292.00 1292 1051 61 78 88 13 1
..................................................CTATGTACTAGTGCCGCAGGAG............................................................................................... 22 1 1 1267.00 1267 6 1244 9 5 1 2
..................................................CTAAGTACTAGTGCCGCAGGAGA.............................................................................................. 23 1 1 1128.00 1128 858 150 30 46 16 28
..................................................CTAAGTACTAGTGCCGCAGGCG............................................................................................... 22 1 1 1072.00 1072 7 0 282 644 6 133
..................................................CTAAGTACTGGTGCCGCAGGAG............................................................................................... 22 1 1 1068.00 1068 901 22 70 51 14 10
..................................................CTAAGTACTAGGGCCGCAGGAG............................................................................................... 22 1 1 1059.00 1059 866 25 82 65 4 17
..................................................CTAAGGACTAGTGCCGCAGGAG............................................................................................... 22 1 1 855.00 855 26 197 330 235 8 59
..................................................CTAAGTACTAGTGCCGCAGGAT............................................................................................... 22 1 1 740.00 740 612 14 41 57 7 9
..................................................CTAAGTACTAGCGCCGCAGGAG............................................................................................... 22 1 1 673.00 673 241 139 173 93 7 20
....................................................AAGTACTAGTGCCGCAGGAG............................................................................................... 20 0 1 663.00 663 552 100 5 4 0 2
..................................................CTAAGTACTAGTGCCGCAGGT................................................................................................ 21 1 1 621.00 621 512 1 51 46 10 1
..................................................CTAAGTACTAGTGCCGCCGGAG............................................................................................... 22 1 1 607.00 607 3 1 82 456 1 64
...................................................TAAGTACTAGTGCCGCAGGAGT.............................................................................................. 22 0 1 558.00 558 426 68 24 16 10 14
..................................................CTAAGTACTAGAGCCGCAGGAG............................................................................................... 22 1 1 537.00 537 439 23 41 20 7 7
..................................................CTAAGTACTAGTGCCGCAG.................................................................................................. 19 0 1 464.00 464 394 14 28 21 7 0
..................................................CGATGTACTAGTGCCGCAGGAG............................................................................................... 22 2 1 449.00 449 0 449 0 0 0 0
..................................................CTAAGCACTAGTGCCGCAGGAG............................................................................................... 22 1 1 422.00 422 49 46 195 102 8 22
..................................................CGAAGTACTAGTGCCGCAGGA................................................................................................ 21 1 1 419.00 419 1 407 5 6 0 0
..................................................TTAAGTACTAGTGCCGCAGGAG............................................................................................... 22 1 1 414.00 414 29 163 169 31 3 19
..................................................CTAAGTACTAGGGCCGCAGGA................................................................................................ 21 1 1 393.00 393 366 3 13 10 0 1
...............................................................................................CCTGCTGCCCAAGTGCTTATCA.................................................. 22 0 1 369.00 369 152 103 49 43 5 17
..................................................CTAAGTACTAGTGCCGCAGGGG............................................................................................... 22 1 1 368.00 368 69 57 121 70 6 45
..................................................CTAAGTACTAGTGCCGCAGGAGC.............................................................................................. 23 1 1 364.00 364 89 213 22 21 14 5
..................................................CTAAGTACTAGTGCCGCAGGTG............................................................................................... 22 1 1 359.00 359 4 1 217 125 0 12
.................................................CCTAAGTACTAGTGCCGCAGGAG............................................................................................... 23 0 1 349.00 349 207 125 11 5 0 1
...............................................................................................CCTGCTGCCCAAGTGCTTATC................................................... 21 0 1 340.00 340 40 59 132 92 9 8
..................................................CTAAGTACTAGTGCCGCATGAG............................................................................................... 22 1 1 286.00 286 35 35 69 127 14 6
..................................................CTAAGTACTAGTGCCGCAGTAG............................................................................................... 22 1 1 282.00 282 26 19 122 109 4 2
..................................................CTAAGTACTGGTGCCGCAGGA................................................................................................ 21 1 1 280.00 280 263 1 10 3 2 1
...................................................TAAGTACTAGTGCCGCAGG................................................................................................. 19 0 1 259.00 259 253 0 2 3 0 1
..................................................CTAAGTACTAGTGCCTCAGGAG............................................................................................... 22 1 1 240.00 240 83 74 31 34 13 5
..................................................CTCAGTACTAGTGCCGCAGGAG............................................................................................... 22 1 1 235.00 235 5 185 9 31 0 5
..................................................CTAAGTACTAGTTCCGCAGGAG............................................................................................... 22 1 1 231.00 231 74 58 16 53 25 5
..................................................CTAAGTACTAGTGCAGCAGGAG............................................................................................... 22 1 1 203.00 203 22 85 58 24 8 6
..................................................CTAAGGACTAGTGCCGCAGGTG............................................................................................... 22 2 1 200.00 200 0 0 131 69 0 0
..................................................CTAAGTACTAGTGCCGCAGGAGTT............................................................................................. 24 0 1 199.00 199 101 17 25 23 21 12
....................................................AAGTACTAGTGCCGCAGGA................................................................................................ 19 0 1 198.00 198 179 19 0 0 0 0
..................................................CTAAGTACTAGTGCCACAGGAG............................................................................................... 22 1 1 197.00 197 51 22 56 47 13 8
..................................................CGAAGTACTAGTGCCGCAGGAC............................................................................................... 22 2 1 196.00 196 0 193 2 1 0 0
..................................................CCAAGTACTAGTGCCGCAGGAG............................................................................................... 22 1 1 194.00 194 26 78 33 43 4 10
..................................................CTAAGTACTAGAGCCGCAGGA................................................................................................ 21 1 1 187.00 187 179 1 5 0 1 1
..................................................CTAAGTAATAGTGCCGCAGGAG............................................................................................... 22 1 1 169.00 169 7 113 24 14 6 5
.................................................TCTAAGTACTAGTGCCGCAGGAG............................................................................................... 23 1 1 169.00 169 165 4 0 0 0 0
..................................................CGAAGTACTAGTGCCGCAGGAGT.............................................................................................. 23 1 1 168.00 168 0 168 0 0 0 0
..................................................CTAAGTACTAGTGCCGCAGCAG............................................................................................... 22 1 1 168.00 168 12 13 101 35 3 4
..................................................CTAAGTACTAGTGACGCAGGAG............................................................................................... 22 1 1 162.00 162 9 5 75 50 9 14
..................................................ATAAGTACTAGTGCCGCAGGAG............................................................................................... 22 1 1 160.00 160 25 5 81 33 8 8
..................................................CTAAGTACTACTGCCGCAGGAG............................................................................................... 22 1 1 155.00 155 45 44 38 15 9 4
..................................................CTAAGTACTATTGCCGCAGGAG............................................................................................... 22 1 1 153.00 153 83 19 18 15 18 0
..................................................CTAAGTACTAGCGCCGCAGGA................................................................................................ 21 1 1 153.00 153 102 13 21 13 2 2
..................................................CTAAGTACTAGTGCCGCACGAG............................................................................................... 22 1 1 150.00 150 18 1 70 52 2 7
..................................................CTAAGTACTAGTGCCGCGGGAG............................................................................................... 22 1 1 145.00 145 39 21 40 35 2 8
..................................................CTACGTACTAGTGCCGCAGGAG............................................................................................... 22 1 1 143.00 143 0 0 34 101 3 5
.................................................GCTAAGTACTAGTGCCGCAGGAG............................................................................................... 23 1 1 138.00 138 138 0 0 0 0 0
..................................................CTAGGTACTAGTGCCGCAGGAG............................................................................................... 22 1 1 123.00 123 36 6 36 34 3 8
..................................................CTAAGTACTAGTGCTGCAGGAG............................................................................................... 22 1 1 122.00 122 29 23 34 23 11 2
..................................................CTAAGTACTAGTCCCGCAGGAG............................................................................................... 22 1 1 119.00 119 44 31 14 11 17 2
..................................................CTAAGTACTAGTGCCCCAGGAG............................................................................................... 22 1 1 118.00 118 30 7 43 27 6 5
..................................................CTAAGTACTAGTGCCGCAAGAG............................................................................................... 22 1 1 118.00 118 15 7 21 62 3 10
..................................................CTATGTACTAGTGCCGCAGGA................................................................................................ 21 1 1 117.00 117 3 113 1 0 0 0
..................................................CTAAGTACCAGTGCCGCAGGAG............................................................................................... 22 1 1 113.00 113 18 18 42 28 3 4
..............................................................................................TCCTGCTGCCCAAGTGCTTATC................................................... 22 0 1 111.00 111 14 35 30 23 2 7
..................................................CTAAGTACTAGTGCCGCA................................................................................................... 18 0 1 109.00 109 59 2 28 20 0 0
..................................................CTAAGGACTAGTGCCGCAGGA................................................................................................ 21 1 1 109.00 109 9 29 38 30 2 1
..................................................CTAAGAACTAGTGCCGCAGGAG............................................................................................... 22 1 1 109.00 109 23 18 52 10 2 4
..................................................CTGAGTACTAGTGCCGCAGGAG............................................................................................... 22 1 1 107.00 107 38 8 25 29 3 4
.....................................................AGTACTAGTGCCGCAGGAG............................................................................................... 19 0 1 107.00 107 93 8 2 2 1 1
.................................................ACTAAGTACTAGTGCCGCAGGAG............................................................................................... 23 1 1 107.00 107 103 2 1 1 0 0
..................................................CTAAGTGCTAGTGCCGCAGGAG............................................................................................... 22 1 1 104.00 104 29 27 20 20 1 7
...............................................................................................CCTGCTGCCCAAGTGCTTAT.................................................... 20 0 1 104.00 104 18 0 42 39 5 0
..................................................CTAAGTACTAGTGCCGCCGGA................................................................................................ 21 1 1 94.00 94 0 1 14 73 0 6
.................................................CCTAAGTACTAGTGCCGCAGGA................................................................................................ 22 0 1 90.00 90 67 23 0 0 0 0
...................................................TAAGTACTAGTGCCGCAGGAGA.............................................................................................. 22 1 1 88.00 88 84 3 0 1 0 0
..................................................CTAAGTACTAGTGCCGAAGGAG............................................................................................... 22 1 1 86.00 86 10 0 45 18 5 8
..................................................CAAAGTACTAGTGCCGCAGGAG............................................................................................... 22 1 1 84.00 84 11 66 2 5 0 0
..................................................CTAAGTACTAGTGCCGCCGGCG............................................................................................... 22 2 1 82.00 82 0 0 6 69 0 7
...................................................TAAGTACTAGTGCCGCAGGAA............................................................................................... 21 1 1 81.00 81 80 1 0 0 0 0
...................................................TAAGTACTGGTGCCGCAGGAG............................................................................................... 21 1 1 79.00 79 75 0 2 2 0 0
..................................................CTAAGTACTAGTACCGCAGGAG............................................................................................... 22 1 1 79.00 79 14 17 29 14 2 3
..................................................CTAAGTACTAGTGCCGCAGAAG............................................................................................... 22 1 1 77.00 77 10 12 22 27 3 3
..................................................CTAAGTACTAGTGCCGCAGGAGG.............................................................................................. 23 1 1 76.00 76 58 10 3 0 3 2
..................................................CTAAGTACTAGTGCCGCAGT................................................................................................. 20 1 1 76.00 76 67 0 4 4 1 0
..................................................CTAAGTACTAGTGCCGCTGGAG............................................................................................... 22 1 1 72.00 72 5 19 27 14 3 4
..................................................CTAAGTACTCGTGCCGCAGGAG............................................................................................... 22 1 1 71.00 71 2 0 15 48 0 6
..................................................CTAAGTACTAGTGCCGCAGGG................................................................................................ 21 1 1 70.00 70 19 31 8 10 0 2
..................................................CTAAGTACTAGTGTCGCAGGAG............................................................................................... 22 1 1 68.00 68 17 4 16 18 6 7
......................................................GTACTAGTGCCGCAGGAG............................................................................................... 18 0 1 68.00 68 58 7 2 0 1 0
..................................................CTAAGTACTAATGCCGCAGGAG............................................................................................... 22 1 1 68.00 68 21 14 16 11 3 3
..................................................CTAATTACTAGTGCCGCAGGAG............................................................................................... 22 1 1 66.00 66 44 8 5 4 3 2
..................................................CTAAGTACTAGTGCCGCAGGAAA.............................................................................................. 23 2 1 66.00 66 53 1 6 3 3 0
..................................................CTAAGCACTAGTGCCGCAGGA................................................................................................ 21 1 1 64.00 64 20 2 26 16 0 0
..................................................CTAAGTACTAGTGCCGTAGGAG............................................................................................... 22 1 1 63.00 63 18 6 17 15 4 3
..................................................CTAAGTATTAGTGCCGCAGGAG............................................................................................... 22 1 1 62.00 62 15 8 19 16 3 1
..................................................CGATGTACTAGTGCCGCAGGA................................................................................................ 21 2 1 61.00 61 0 61 0 0 0 0
..................................................GTAAGTACTAGTGCCGCAGGAG............................................................................................... 22 1 1 59.00 59 19 8 25 3 3 1
.................................................TCTAAGTACTAGTGCCGCAGGA................................................................................................ 22 1 1 59.00 59 58 1 0 0 0 0
..................................................CTATGTACTAGTGCCGCAGGAC............................................................................................... 22 2 1 58.00 58 0 58 0 0 0 0
..................................................CTAAGTACTAGTGCCTCAGGA................................................................................................ 21 1 1 57.00 57 43 5 3 4 2 0
..................................................CTAAGTACTAGTGCCGCAGTT................................................................................................ 21 2 1 57.00 57 53 1 2 1 0 0
..................................................TTAAGTACTAGTGCCGCAGGA................................................................................................ 21 1 1 57.00 57 7 22 21 6 1 0
..................................................CTAAGTACTAGTGCCGCAGGC................................................................................................ 21 1 1 54.00 54 13 0 22 16 1 2
..............................................................................................TCCTGCTGCCCAAGTGCTTAT.................................................... 21 0 1 51.00 51 25 0 15 11 0 0
..................................................CTAAGTACTAGTTCCGCAGGA................................................................................................ 21 1 1 49.00 49 35 2 2 9 1 0
..................................................TGAAGTACTAGTGCCGCAGGAG............................................................................................... 22 2 1 49.00 49 0 47 1 1 0 0
..................................................CGCAGTACTAGTGCCGCAGGAG............................................................................................... 22 2 1 48.00 48 0 48 0 0 0 0
..................................................CTAAGGACTAGTGCCGCAGGCG............................................................................................... 22 2 1 47.00 47 0 0 28 14 0 5
..................................................CTAAGTACTAGTGCCGCAGGTT............................................................................................... 22 2 1 47.00 47 36 1 5 5 0 0
..................................................CGAAGTACTAGTGCCGCAGG................................................................................................. 20 1 1 44.00 44 0 44 0 0 0 0
..................................................CTAAGTACTAGTGCCGCAGGATT.............................................................................................. 23 1 1 44.00 44 39 3 1 1 0 0
..................................................CTAAGTACTAGTGCCGCAGGAGTC............................................................................................. 24 1 1 44.00 44 35 3 2 1 3 0
..................................................CTATGTACTAGTGCCGCAGGAGT.............................................................................................. 23 1 1 43.00 43 0 42 1 0 0 0
..................................................CTAAGGACTAGCGCCGCAGGAG............................................................................................... 22 2 1 43.00 43 0 2 29 10 0 2
..................................................CTAAGCACTAGGGCCGCAGGAG............................................................................................... 22 2 1 43.00 43 1 0 28 10 0 4
...................................................TAAGTACTAGTGCCGCAGGT................................................................................................ 20 1 1 43.00 43 43 0 0 0 0 0
.................................................ACTAAGTACTAGTGCCGCAGGA................................................................................................ 22 1 1 43.00 43 41 0 0 2 0 0
..................................................CTAAGTACTAGTGCCGCAGGAGTTT............................................................................................ 25 1 1 43.00 43 19 0 10 9 4 1
..................................................CTAAATACTAGTGCCGCAGGAG............................................................................................... 22 1 1 42.00 42 6 2 9 15 1 9
..................................................CGAAGGACTAGTGCCGCAGGAG............................................................................................... 22 2 1 42.00 42 0 19 16 7 0 0
..................................................CTAAGTACGAGTGCCGCAGGAG............................................................................................... 22 1 1 41.00 41 5 2 25 7 0 2
..............................................................................................TCCTGCTGCCCAAGTGCTTATCA.................................................. 23 0 1 40.00 40 30 5 3 1 0 1
..................................................CTAAGTACTATTGCCGCAGGA................................................................................................ 21 1 1 40.00 40 33 0 3 1 3 0
..................................................CTAAGTACTAGTGCCGCATGA................................................................................................ 21 1 1 37.00 37 14 6 5 11 1 0
...................................................TAAGTACTAGTGCCGCAG.................................................................................................. 18 0 1 37.00 37 35 0 0 2 0 0
.................................................GCTAAGTACTAGTGCCGCAGGA................................................................................................ 22 1 1 36.00 36 36 0 0 0 0 0
..................................................CTAAGGACTAGGGCCGCAGGAG............................................................................................... 22 2 1 36.00 36 1 0 17 17 0 1
...................................................TAAGTACTAGTGCCGCAGGAT............................................................................................... 21 1 1 34.00 34 34 0 0 0 0 0
..................................................CTAAGTACTAGGGCCGCAGGAGT.............................................................................................. 23 1 1 33.00 33 28 1 4 0 0 0
..................................................CTAAGTACTAGTGCCGCACGCG............................................................................................... 22 2 1 33.00 33 0 0 17 16 0 0
..................................................CTCAGTACTAGTGCCGCAGGA................................................................................................ 21 1 1 32.00 32 2 25 3 2 0 0
....................................................AAGTACTAGTGCCGCAGGAGT.............................................................................................. 21 0 1 32.00 32 25 7 0 0 0 0
..................................................CTAAGTACTACTGCCGCAGGA................................................................................................ 21 1 1 32.00 32 21 1 7 3 0 0
..................................................CTAAGGACTAGTGCCGCAGCTG............................................................................................... 22 3 1 31.00 31 0 0 25 6 0 0
..................................................CTAAGAACTAGTGCCGCAGGA................................................................................................ 21 1 1 31.00 31 15 3 10 3 0 0
..................................................CTAAGTACTAGTGCTGCAGGA................................................................................................ 21 1 1 31.00 31 14 1 7 7 2 0
..................................................CTAAGTACTAGTGCCGCAGCTG............................................................................................... 22 2 1 30.00 30 0 0 19 9 0 2
..................................................CTAAGTACTGGTGCCGCAGGAGT.............................................................................................. 23 1 1 30.00 30 23 2 4 1 0 0
..................................................CTAAGTACTAGTGCAGCAGGA................................................................................................ 21 1 1 29.00 29 16 2 6 3 1 1
..................................................CTAAGTACTAGCGCCGCAGGAGT.............................................................................................. 23 1 1 29.00 29 11 9 5 3 0 1
..................................................CTAAGGACTAGTGCCGCAGCAG............................................................................................... 22 2 1 28.00 28 0 0 14 14 0 0
..................................................TTAAGTACTAGTGCCGCAGGAGT.............................................................................................. 23 1 1 28.00 28 1 16 8 3 0 0
..................................................CTAAGCACTAGTGCCGCAGGCG............................................................................................... 22 2 1 28.00 28 0 0 17 11 0 0
..................................................CTAAGTACTAGTGGCGCAGGAG............................................................................................... 22 1 1 28.00 28 6 4 8 4 2 4
................................................................................................CTGCTGCCCAAGTGCTTATCA.................................................. 21 0 1 27.00 27 17 3 2 3 0 2
..................................................CTAAGTACTAGCGCAGCAGGAG............................................................................................... 22 2 1 27.00 27 0 25 2 0 0 0
..................................................CTAAGTACTAGTGCCGCGGGA................................................................................................ 21 1 1 27.00 27 16 1 5 2 2 1
..................................................CTAAGTACTAGGGCCGCAGG................................................................................................. 20 1 1 27.00 27 25 0 1 1 0 0
..................................................CTAAGGACTAGTGCCGCAGGAGT.............................................................................................. 23 1 1 27.00 27 2 15 4 3 0 3
..................................................CTAAGTACTTGTGCCGCAGGAG............................................................................................... 22 1 1 27.00 27 2 12 6 6 1 0
..................................................CTACGTACTAGTGCCGCAGGA................................................................................................ 21 1 1 27.00 27 2 0 2 23 0 0
..................................................CTACGGACTAGTGCCGCAGGTG............................................................................................... 22 3 1 26.00 26 0 0 9 17 0 0
..................................................CTGAGTACTAGTGCCGCAGGA................................................................................................ 21 1 1 26.00 26 13 3 5 3 1 1
..................................................CTAAGTACTAGTGCCACAGGA................................................................................................ 21 1 1 26.00 26 11 3 8 4 0 0
.....................................................AGTACTAGTGCCGCAGGA................................................................................................ 18 0 1 26.00 26 23 3 0 0 0 0
..................................................CTAAGTACTAGTGACGCAGGA................................................................................................ 21 1 1 25.00 25 2 0 11 9 1 2
..................................................CTACGGACTAGTGCCGCAGGAG............................................................................................... 22 2 1 25.00 25 0 0 5 19 0 1
..................................................CTAAGTACTAGTGCCGCAGGAAT.............................................................................................. 23 1 1 25.00 25 17 2 4 2 0 0
..................................................CTAACTACTAGTGCCGCAGGAG............................................................................................... 22 1 1 25.00 25 7 3 7 7 1 0
..................................................CTAAGTACCAGTGCCGCAGGA................................................................................................ 21 1 1 25.00 25 9 6 6 4 0 0
..................................................CTAAGTACTAGTGCCGCAGTTT............................................................................................... 22 3 1 25.00 25 24 0 1 0 0 0
..................................................CTAAGTACTAGTGCCGCAGGAGAA............................................................................................. 24 2 1 24.00 24 21 0 1 1 1 0
..................................................CTAAGTACTAGTGCCGCAGTC................................................................................................ 21 2 1 24.00 24 22 0 1 1 0 0
..................................................CGAAGTACTAGTGCCGCAGGAGC.............................................................................................. 23 2 1 24.00 24 0 24 0 0 0 0
..................................................CTAAGCACTAGTGCCGCAGGGG............................................................................................... 22 2 1 24.00 24 0 1 11 9 0 3
..................................................CTAAGGACTAGTGCCGCAGGGG............................................................................................... 22 2 1 24.00 24 0 0 13 6 0 5
...................................................TAAGTACTAGTACCGCAGGAG............................................................................................... 21 1 1 23.00 23 23 0 0 0 0 0
..................................................CTAAGGACTAGGGCCGCAGGTG............................................................................................... 22 3 1 23.00 23 0 0 14 9 0 0
..................................................CTAAGTAATAGTGCCGCAGGA................................................................................................ 21 1 1 22.00 22 0 16 3 2 0 1
...................................................TAAGTACTAGTGCCGCAGGCG............................................................................................... 21 1 1 22.00 22 1 0 3 18 0 0
..................................................CTAGGTACTAGTGCCGCAGGA................................................................................................ 21 1 1 22.00 22 11 3 5 3 0 0
..................................................CTAAGTACTGGTGCCGCAGG................................................................................................. 20 1 1 21.00 21 19 0 0 2 0 0
..................................................CTAAGGACTAGTGCCGCAGGT................................................................................................ 21 2 1 21.00 21 0 0 13 8 0 0
..................................................CTAAGTACTAGTGCCGCCGGGG............................................................................................... 22 2 1 21.00 21 0 0 6 12 0 3
..................................................CTAAGGACTAGTGACGCAGGTG............................................................................................... 22 3 1 21.00 21 0 0 12 9 0 0
..................................................CGAAGGACTAGTGCCGCAGGTG............................................................................................... 22 3 1 21.00 21 0 0 12 9 0 0
..................................................ATAAGTACTAGTGCCGCAGGA................................................................................................ 21 1 1 21.00 21 7 0 11 3 0 0
..................................................CGAAGTACTAGTGCCGCAGGAGA.............................................................................................. 23 2 1 21.00 21 0 21 0 0 0 0
..................................................CCAAGTACTAGTGCCGCAGGA................................................................................................ 21 1 1 21.00 21 8 7 2 4 0 0
..................................................ATAAGGACTAGTGCCGCAGGAG............................................................................................... 22 2 1 21.00 21 0 0 8 7 0 6
..................................................CTAAGTACTAGCGCCGCAGGCG............................................................................................... 22 2 1 21.00 21 0 0 11 9 0 1
..................................................CTAAGTCCTAGTGCCGCAGGAG............................................................................................... 22 1 1 21.00 21 0 1 6 10 0 4
..................................................CTAAGTGCTAGTGCCGCAGGA................................................................................................ 21 1 1 20.00 20 14 0 2 4 0 0
..................................................CGAAGTACTAGCGCCGCAGGAG............................................................................................... 22 2 1 20.00 20 0 18 1 0 0 1
..................................................CTAAGTACTAGTGCCGCCGGAGT.............................................................................................. 23 1 1 20.00 20 1 0 0 14 0 5
........................................................................TTAGGGTTGTGTCCGCAATGCCT........................................................................ 23 0 1 20.00 20 1 9 6 2 0 2
..............................................................................................TCCTGCTGCCCAAGTGCTT...................................................... 19 0 1 20.00 20 0 0 8 12 0 0
..................................................CTAAGTACTAGTGCCGCAGTA................................................................................................ 21 1 1 20.00 20 11 0 6 3 0 0
...................................................TAAGTACTAGTGCCGCAGGAGC.............................................................................................. 22 1 1 19.00 19 4 13 2 0 0 0
..................................................CTAAGTACTAGTGACGCAGGTG............................................................................................... 22 2 1 19.00 19 0 0 10 8 0 1
..................................................CTATGTACTAGTGCCGCAGG................................................................................................. 20 1 1 19.00 19 0 19 0 0 0 0
..................................................CTAAGTACTAGTGCCGCAGTAT............................................................................................... 22 2 1 19.00 19 1 0 8 10 0 0
...................................................TAAGTACTGGTGCCGCAGGA................................................................................................ 20 1 1 18.00 18 17 0 0 1 0 0
..................................................CTAAGGACTAGTGACGCAGGAG............................................................................................... 22 2 1 18.00 18 0 0 5 10 0 3
..................................................CTAAGGACTAGTGCCGCAGGAC............................................................................................... 22 2 1 18.00 18 0 11 4 3 0 0
..................................................CTAAGTACTAGTGCGGCAGGAG............................................................................................... 22 1 1 18.00 18 9 2 5 2 0 0
..................................................TTAAGGACTAGTGCCGCAGGAG............................................................................................... 22 2 1 18.00 18 0 1 12 5 0 0
..................................................CTAAGTACTAGAGCCGCAGGAGT.............................................................................................. 23 1 1 18.00 18 16 1 0 1 0 0
..................................................CTAAGTACTAGTTCCGCAGGTG............................................................................................... 22 2 1 18.00 18 0 0 6 12 0 0
...................................................TAAGTACTAGTGCCGCCGGAG............................................................................................... 21 1 1 18.00 18 0 0 3 15 0 0
..................................................CTAAGCACTAGTGCCGAAGGAG............................................................................................... 22 2 1 17.00 17 0 0 12 4 0 1
..................................................CTAAGTACTAGTGCCGCACGA................................................................................................ 21 1 1 17.00 17 6 0 3 6 0 2
..................................................CTACGTACTAGTGCCGCAGGCG............................................................................................... 22 2 1 17.00 17 0 0 5 11 0 1
..................................................CGAAGTAATAGTGCCGCAGGAG............................................................................................... 22 2 1 17.00 17 0 14 3 0 0 0
..................................................CGAAGTACTAGTGCAGCAGGAG............................................................................................... 22 2 1 17.00 17 0 15 1 1 0 0
..................................................CTAAGTACTAGTGCCGAAGGA................................................................................................ 21 1 1 17.00 17 6 0 7 4 0 0
..................................................CGATGTACTAGTGCCGCAGGAGT.............................................................................................. 23 2 1 17.00 17 0 17 0 0 0 0
..................................................CTAAGTACTAGTCCCGCAGGA................................................................................................ 21 1 1 17.00 17 8 5 4 0 0 0
..................................................CTAAGCACTAGTGCCGCAGCAG............................................................................................... 22 2 1 17.00 17 0 0 12 5 0 0
..................................................GTAAGTACTAGTGCCGCAGGA................................................................................................ 21 1 1 17.00 17 7 2 5 2 1 0
..................................................CTAAGTTCTAGTGCCGCAGGAG............................................................................................... 22 1 1 17.00 17 5 3 3 4 1 1
..................................................CTAAGTACTCGTGCCGCCGGAG............................................................................................... 22 2 1 16.00 16 0 0 0 14 0 2
..................................................CTAAGCACTAGTGCCGCACGAG............................................................................................... 22 2 1 16.00 16 0 0 11 5 0 0
...................................................TAAGTACTAGTTCCGCAGGAG............................................................................................... 21 1 1 16.00 16 12 1 0 2 1 0
..................................................CTAAGTACTAGTGCCGCAGTCG............................................................................................... 22 2 1 16.00 16 0 0 12 4 0 0
..................................................CTAAGTACTAGTGCCGCCGG................................................................................................. 20 1 1 15.00 15 0 0 2 13 0 0
..................................................CTAAGTACTAGGGCCGCAGGCG............................................................................................... 22 2 1 15.00 15 0 0 6 8 0 1
..................................................CTCAGTACTAGTGCCGCAGGAC............................................................................................... 22 2 1 15.00 15 0 15 0 0 0 0
..................................................CTAAGTACTAGTGCCGCAGGCGT.............................................................................................. 23 1 1 15.00 15 0 0 3 8 0 4
..................................................CTAAGTACTAGCGCCGCAGGGG............................................................................................... 22 2 1 15.00 15 0 0 5 7 0 3
..................................................CTAAGTACTAGTGCCGCAGGCT............................................................................................... 22 2 1 15.00 15 1 0 9 4 0 1
..............................................GATCCTAAGTACTAGTGCCGCAGGAG............................................................................................... 26 2 1 15.00 15 0 13 1 0 0 1
....................................................AAGTACTAGTGCCGCAGG................................................................................................. 18 0 1 15.00 15 14 1 0 0 0 0
..................................................CTACGTACTAGTGCCGCAGGTG............................................................................................... 22 2 1 15.00 15 0 0 7 8 0 0
..................................................CTTAGTACTAGTGCCGCAGGAG............................................................................................... 22 1 1 15.00 15 3 0 3 4 2 3
..................................................CTAAGGACTAGTTCCGCAGGTG............................................................................................... 22 3 1 14.00 14 0 0 6 8 0 0
..................................................CGAAGTACTAGTGCCGCAGGTG............................................................................................... 22 2 1 14.00 14 0 0 12 2 0 0
..................................................CTAAGGACTAGTGCCGCAGGAT............................................................................................... 22 2 1 14.00 14 0 0 6 8 0 0
..................................................CTAAGTACTAGTGCCGCAGGTTT.............................................................................................. 23 2 1 14.00 14 12 1 1 0 0 0
..................................................CTAAGTACTAGTGCCGCAGAA................................................................................................ 21 1 1 14.00 14 6 2 4 2 0 0
..................................................CTAAGTACAAGTGCCGCAGGAG............................................................................................... 22 1 1 14.00 14 2 0 8 2 2 0
..................................................CTAAGTACTAGTACCGCAGGA................................................................................................ 21 1 1 14.00 14 5 2 5 2 0 0
..................................................CTAAGTAGTAGTGCCGCAGGAG............................................................................................... 22 1 1 14.00 14 1 5 4 2 0 2
..................................................CTAAGTACTAGTGCCGCAGAG................................................................................................ 21 2 1 14.00 14 6 1 4 0 3 0
..................................................CTATGTAATAGTGCCGCAGGAG............................................................................................... 22 2 1 13.00 13 0 13 0 0 0 0
..................................................CTAAGTACTAGTGCCGCAGTGG............................................................................................... 22 2 1 13.00 13 0 0 12 1 0 0
...................................................TAAGTACTAGTCCCGCAGGAG............................................................................................... 21 1 1 13.00 13 13 0 0 0 0 0
................................................................................................CTGCTGCCCAAGTGCTTATC................................................... 20 0 1 13.00 13 3 4 4 2 0 0
..................................................CTAAGTACTACTGCCGCAGGCG............................................................................................... 22 2 1 13.00 13 0 0 9 2 0 2
..................................................CTAAGTACTAGTGCCGCAGTTG............................................................................................... 22 2 1 13.00 13 1 0 4 7 0 1
..................................................CTAAGTACTAGTGCCCCAGGA................................................................................................ 21 1 1 13.00 13 8 0 1 3 1 0
...............................................................................................CCTGCTGCCCAAGTGCTTATCT.................................................. 22 1 1 13.00 13 2 0 6 5 0 0
..................................................CTAAGGACTAGTGCAGCAGGAG............................................................................................... 22 2 1 13.00 13 0 2 5 4 0 2
..................................................CTAAGGACTAGTGCCGCAGG................................................................................................. 20 1 1 13.00 13 1 1 5 6 0 0
..................................................CTAAGTACTAGTGCCGCAGA................................................................................................. 20 1 1 13.00 13 10 2 0 0 1 0
..................................................CTAAGTACTAGTGTCGCAGGA................................................................................................ 21 1 1 13.00 13 7 0 1 4 1 0
..................................................CTAAGCACTAGTGCCGCAGGAGT.............................................................................................. 23 1 1 12.00 12 1 1 6 3 0 1
..................................................CTAAGTACTAGTTCCGCAGTAG............................................................................................... 22 2 1 12.00 12 0 0 0 12 0 0
....................................................AGGTACTAGTGCCGCAGGAG............................................................................................... 20 1 1 12.00 12 1 11 0 0 0 0
..................................................CTAAGTACTAATGCCGCAGGA................................................................................................ 21 1 1 12.00 12 9 0 1 2 0 0
..................................................CTAATTACTAGTGCCGCAGGA................................................................................................ 21 1 1 12.00 12 9 1 0 1 1 0
..................................................CTAAGTACTCGTGCCGCAGGA................................................................................................ 21 1 1 12.00 12 0 0 1 11 0 0
.................................................CCTAAGTACTAGTGCCGCAGGAGT.............................................................................................. 24 0 1 12.00 12 9 3 0 0 0 0
..............................................................................................TCCTGCTGCCCAAGTGCTTA..................................................... 20 0 1 12.00 12 3 0 5 4 0 0
..................................................CTAAGTACTAGGGCCGCAGGTG............................................................................................... 22 2 1 12.00 12 0 0 3 9 0 0
..................................................CGATGTACTAGTGCCGCAGGAC............................................................................................... 22 3 2 11.50 23 0 23 0 0 0 0
..................................................CTAAGTACTAGCGCCGCAGGAC............................................................................................... 22 2 1 11.00 11 1 4 4 2 0 0
...................................................CTAGTACTAGTGCCGCAGGAG............................................................................................... 21 2 1 11.00 11 0 1 8 1 1 0
..................................................CTAACTACTAGTGCCGCAGGA................................................................................................ 21 1 1 11.00 11 6 0 0 4 1 0
..................................................CTAAGGACTAGTGCCGCGGGTG............................................................................................... 22 3 1 11.00 11 0 0 10 1 0 0
..................................................CGAAGTACTAGTGCCTCAGGAG............................................................................................... 22 2 1 11.00 11 0 9 0 1 0 1
................................................ATCTAAGTACTAGTGCCGCAGGAG............................................................................................... 24 2 1 11.00 11 10 1 0 0 0 0
..................................................CTAAGTACTAGTGCCGCAAGA................................................................................................ 21 1 1 11.00 11 1 1 2 6 0 1
..................................................CGAAGGACTAGTGCCGCAGGA................................................................................................ 21 2 1 11.00 11 0 1 8 2 0 0
..................................................CTAAGTACTCGTGCCGCAGGCG............................................................................................... 22 2 1 11.00 11 0 0 3 8 0 0
..................................................CTAAGTACTAGTGCCGCAGGTC............................................................................................... 22 2 1 11.00 11 6 0 2 2 1 0
..................................................CTATGTACTAGTGCCGCAGGAGC.............................................................................................. 23 2 1 11.00 11 0 11 0 0 0 0
..................................................CTACGTACTCGTGCCGCAGGAG............................................................................................... 22 2 1 11.00 11 0 0 0 9 0 2
...................................................TAAGTACTAGTACCGCAGGA................................................................................................ 20 1 1 10.00 10 10 0 0 0 0 0
..................................................CTGAGGACTAGTGCCGCAGGTG............................................................................................... 22 3 1 10.00 10 0 0 6 4 0 0
..................................................CTAAGTACTAGCGCCGCACGAG............................................................................................... 22 2 1 10.00 10 0 0 8 2 0 0
..................................................CTAAGGACTAGTTCCGCAGGAG............................................................................................... 22 2 1 10.00 10 1 1 2 5 0 1
..................................................CTGAGGACTAGTGCCGCAGGAG............................................................................................... 22 2 1 10.00 10 0 0 2 7 0 1
..................................................CTAAGAACTAGTGCCGCAGGCG............................................................................................... 22 2 1 10.00 10 0 0 8 2 0 0
..................................................CTAAGTACTAGTGCCGCACTAG............................................................................................... 22 2 1 10.00 10 0 0 4 6 0 0
...................................................TAAGTACTAGTGCCGCAGGAGTT............................................................................................. 23 0 1 10.00 10 8 2 0 0 0 0
..................................................CTAAGCACTAGAGCCGCAGGAG............................................................................................... 22 2 1 10.00 10 0 0 6 4 0 0
..................................................CTCAGTACTAGTGCCGCAGGAGT.............................................................................................. 23 1 1 10.00 10 0 8 0 1 0 1
..................................................CTACGTACTAGTGCCGCCGGAG............................................................................................... 22 2 1 10.00 10 0 0 1 9 0 0
..................................................CTAAGGACTAGCGCCGCAGGGG............................................................................................... 22 3 1 10.00 10 0 0 5 3 0 2
..................................................CTAAGTACTAGTGCCGCAT.................................................................................................. 19 1 1 10.00 10 9 0 1 0 0 0
..................................................CTAAGGACTAGTGCCGCAGTAG............................................................................................... 22 2 1 10.00 10 0 0 7 3 0 0
...................................................TAAGTACTAGTGCCGCAGGAC............................................................................................... 21 1 1 10.00 10 4 5 1 0 0 0
..................................................CTAAGTACTAGTGCCGCATGTG............................................................................................... 22 2 1 10.00 10 0 0 6 4 0 0
..................................................CTAAGTACTAGCGCCGCCGGAG............................................................................................... 22 2 1 10.00 10 0 0 4 5 0 1
..................................................CTAAGTACTAGTGCCGCAGCCG............................................................................................... 22 2 1 9.00 9 0 0 7 2 0 0
..................................................CTAAGTACTAGTGCCGCATGCG............................................................................................... 22 2 1 9.00 9 0 0 4 5 0 0
..................................................CTAAGTACTAGTGCCGCTGGCG............................................................................................... 22 2 1 9.00 9 0 0 6 3 0 0
..................................................CAAAGTACTAGTGCCGCAGGA................................................................................................ 21 1 1 9.00 9 2 6 1 0 0 0
..................................................CTAAGTACTAGTGCCGCCGCAG............................................................................................... 22 2 1 9.00 9 0 0 4 5 0 0
..................................................CTAAGTACTAGTGCCGCAGGACT.............................................................................................. 23 1 1 9.00 9 6 2 0 1 0 0
..................................................CTAAGTACTAGTGCCGCGGGTG............................................................................................... 22 2 1 9.00 9 0 0 5 4 0 0
..................................................CTAAGTACTAGTGCCGCGGAG................................................................................................ 21 3 1 9.00 9 4 1 3 1 0 0
...................................................TAAGTACTAGTGCCGCAGTAG............................................................................................... 21 1 1 9.00 9 8 1 0 0 0 0
..................................................CGAAGTACTAGTTCCGCAGGAG............................................................................................... 22 2 1 9.00 9 0 5 1 3 0 0

Anti-sense strand reads

AATGGAACTTAAAGACTGTTTTTTGTCTTTTGTTTTTTGTATAACGAAAGGATTCATGATCACGGCGTCCTCAATCCCAACACAGGCGTTACGGAGGACGACGGGTTCACGAATAGTTTCGCTGCTCAAAAAGTTGTCGTCGTTAATTTGTTTTAATGATTAAAAAA

***********************************((((...(((((((..((((((((...((.(((((((.....(((((....)))))..))))))).))...))))))))..)))))))...))))..*********************************** 		Read size # Mismatch Hit Count Total Norm Total V056

head

 V049

head

 M060

embryo

 V041

embryo
.............................................................................................GAGGACGACGGGATCACGAATC.................................................... 22 2 1 4.00 4 4 0 0 0
.............................................................................................GAGGACGACGGGATCAGGAATC.................................................... 22 3 2 2.50 5 2 3 0 0
..............................................................................................AGGACGACGTGATCACGAATA.................................................... 21 2 1 1.00 1 0 1 0 0
.............................................................................................GAGGACGACGGGATGACGAATC.................................................... 22 3 1 1.00 1 1 0 0 0
.............................................................................................GAGGACGCCGGGATCACGAATA.................................................... 22 2 1 1.00 1 0 1 0 0
.............................................................................................GAGGACGGCGAGATCACGAATA.................................................... 22 3 1 1.00 1 1 0 0 0
.............................................................................................GAGGACGCCGGGCTCACGAATT.................................................... 22 3 1 1.00 1 0 1 0 0
............................................................................................CGAGGACGACGGGATCACGAATC.................................................... 23 3 1 1.00 1 1 0 0 0
..............................................................................................AGGACGACGGGATCACGAATC.................................................... 21 2 1 1.00 1 1 0 0 0
.............................................................................................GAGGACGCCGGGATCAGGAATA.................................................... 22 3 2 1.00 2 2 0 0 0
.............................................................................................GAGGACGACGTGATCACGAAAA.................................................... 22 3 2 0.50 1 1 0 0 0
..............................................................................................AGGACGCCGGGCTCACGAATC.................................................... 21 3 2 0.50 1 1 0 0 0
.............................................................................................GAGGAAGACGGGATCACGAATC.................................................... 22 3 2 0.50 1 0 1 0 0
..............................................................................................AGGGCGACGGGATCACGAATT.................................................... 21 3 2 0.50 1 1 0 0 0
..............................................................................................AGAACGACGGGATCAGGAATA.................................................... 21 3 2 0.50 1 0 1 0 0
..............................................................................................AGGACGCCGGGATCAAGAATA.................................................... 21 3 2 0.50 1 1 0 0 0
..............................................................................................AGGACGCCGGGATCAGGAATA.................................................... 21 3 2 0.50 1 1 0 0 0
.............................................................................................GATGACGCCGGGATCACGAAT..................................................... 21 3 2 0.50 1 1 0 0 0
.............................................................................................GAGGACGCCGCGATCACGAATA.................................................... 22 3 2 0.50 1 1 0 0 0
..............................................................................................AGGACGCCGGGATCACGAATT.................................................... 21 3 2 0.50 1 1 0 0 0
.............................................................................................GAGGACGACGTGATCAGGAATA.................................................... 22 3 3 0.33 1 1 0 0 0
..............................................................................................GGGACAACGGGATCACGAATA.................................................... 21 3 4 0.25 1 1 0 0 0
..............................................................................................AGGACGACGTGCTCACGAATC.................................................... 21 3 5 0.20 1 1 0 0 0
..............................................................................................AGGACGACGGGATCAGGAATC.................................................... 21 3 6 0.17 1 0 1 0 0
.............................TTATTTTTTGTATAACGA........................................................................................................................ 18 1 6 0.17 1 0 0 1 0
.............................................................................................GATGACGACGTGTTCATGAAT..................................................... 21 3 8 0.13 1 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droMoj3 scaffold_6540:10349236-10349402 - dmo_2 confident TTA-------------------CCTTGAA-TTTCTGACAAAAAACAGAAAACAAAAAACATATTGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGGTTGTGTCCGCAATGCCTCCTGCTGCCCAAGTGCTTATCAAAGCGACGAGTTTTTCAAC----------AG-----------------------CAGC----------------------AAT------TAAACAA-AA------TTAC---------TAATTTTT-T
droVir3 scaffold_12855:2861472-2861651 + dvi-mir-252 Known_mirbase TTATAGTACTACATAGAACATAGTTTTAG-TTTGTGACC------AG---------GACATATTGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTTGTGTCCGCAATGCCTCCTGCTGCCCAAGTGCTTATTAAAGCGACTAGTTTTCCACC----------AG-----------------------CAAC----------------------AAT------TAG---AAATGTACTTTATTTA-TT-T--TAATTTAT-T
droGri2 scaffold_14906:3807794-3807939 - dgr_6 confident TTA-------------------C-TTGAGCTTGA----------------------TGCGTATTGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTTGTGTCCGCAATGCCTCCTGCTGCCCAAGTGCTTATTAAGGCGACGAATTTTCCAAC----------AA-----------------------TGTGCG------------------------------AGTGAA-AG------T---CCTTT-T--TGTTTTTT-T
droWil2 scf2_1100000004943:6363156-6363318 - dwi_6 confident A-------------------------------------------------------AGCGTATTGCTTTACTAAGTACTAGTGCCGCAGGAGTTTGGTTCGTGTCCGTAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGACGACTTTACCTACTTAAAAAGCCAG-----------------------TCAGTCTATCGACTATATATTTCAAATGGAAGTAAAAGTGAA-AG------A---CA-A------------G-A
dp5 2:16736602-16736717 - dps-mir-252 Known_mirbase T--------------------------------------------------------------TGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCG-GTGGTCCAAC----------AG-----------------------TGAA---------------------------------------AC------G---CA-GT-G--TGATTTAG-T
droPer2 scaffold_0:3659201-3659316 + dpe_5 confident T--------------------------------------------------------------TGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCG-GTGGTCCAAC----------AG-----------------------TGAA---------------------------------------AC------G---CA-GT-G--TGATTTAG-T
droAna3 scaffold_13340:1848642-1848763 - dan_1 confident T--------------------------------------------------------------CGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGTCCAGC----------AAAATACAAGGAATACAAAAAACAGTGA-----------------------------------------------------------------------
droBip1 scf7180000396712:2482823-2482939 + T--------------------------------------------------------------CGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGTCCAGC----------GAAATACA---AACACAAGAAACA------------------------------------------------------------------------G-T
droKik1 scf7180000302392:529199-529322 + T--------------------------------------------------------------CGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGATGCCCAACCTGCTAGCCCAG-----------------------TGAAAGAA--------------------------------------------------------TGATTCATCT
droFic1 scf7180000453906:210255-210371 + T--------------------------------------------------------------CGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCCTATCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGACGAGTTGTCCATC----------AA-----------------------TGAAGAAG-------------------------------------------TGACC------AGTGATTC----
droEle1 scf7180000491047:1912699-1912809 + ----------------------------------------------------------------GCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGTCCAAC----------AT-----------------------TGAATAAG-------------------------------------------CGAC------------TTC-C-G
droRho1 scf7180000778831:19463-19579 - T--------------------------------------------------------------CGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGTCCAAC----------AG-----------------------TGAAAAAG-------------------------------------------TGACT------CCCATTT----T
droBia1 scf7180000302402:2002498-2002622 - T--------------------------------------------------------------CGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAAGTTGTCCAC----------CG-----------------------CAAG----------------------TGA------GAGAGAA-AG------TGACC---------GGTTCGG-T
droTak1 scf7180000415380:69903-70028 - T--------------------------------------------------------------CACTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGTCCATC----------AG-----------------------TATG--------------------------------AGTGAA-AA------A---CA-GTGAAGTGATTCCA-A
droEug1 scf7180000409802:705207-705327 + T--------------------------------------------------------------CGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGTGCAAC----------AAAG------AAATGA-----AAA--------C-------------------------------------------CCACT------AGTATTTC----
dm3 chr3R:9289907-9290026 - dme-mir-252 Known_mirbase T--------------------------------------------------------------CGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGC----------AAAA------GAATAC-----ACG--------C-------------------------------------------TGCTC------AGTGTTT-----
droSim2 3r:11889176-11889295 + dsi-mir-252 Known_mirbase T--------------------------------------------------------------CGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGC----------AAAA------GAATAC-----ACG--------G-------------------------------------------TGCTC------AGTGCTT-----
droSec2 scaffold_0:12715224-12715347 + dse_3 confident T--------------------------------------------------------------CGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGC----------AAAA------GAATAC-----ACC--------G-------------------------------------------TGCTC------AGTGCTTCGA-T
droYak3 3R:13597986-13598106 - dya_6 confident T--------------------------------------------------------------CGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGC----------AAAA------GAATAC-----ACA--------G-------------------------------------------TGCGC------AGTGCTTC----
droEre2 scaffold_4770:12350688-12350808 + der_1 confident T--------------------------------------------------------------CGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGC----------AAAA------GAATAC-----AAA--------G-------------------------------------------TGCTC------AGTGCTTC----

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
TTA-------------------CCTTGAA-TTTCTGACAAAAAACAGAAAACAAAAAACATATTGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGGTTGTGTCCGCAATGCCTCCTGCTGCCCAAGTGCTTATCAAAGCGACGAGTTTTTCAAC----------AG-----------------------CAGC----------------------AAT------TAAACAA-AA------TTAC---------TAATTTTT-TSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
......................................................................CTAAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................221249513.0024951314395474612398833607312719232
......................................................................CTAAGTACTAGTGCCGCAGGA..............................................................................................................................................................................21166586.0066586553692673103377928851183
.......................................................................TAAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................21111590.00115901039987347483160114
......................................................................CTAAGTACTAGTGCCGCAGGAGT............................................................................................................................................................................2317470.00747046731904687131232194
......................................................................CTAAGTACTAGTGCCGCAGG...............................................................................................................................................................................2014788.0047883856727332125180
.......................................................................TAAGTACTAGTGCCGCAGGA..............................................................................................................................................................................2013796.003796371712121306
......................................................................CTAAGTACTAGTGCCGCAGGAC.............................................................................................................................................................................2211627.0016271834305713476
......................................................................CTAAGTACTAGTGCCGCAGGAA.............................................................................................................................................................................2211292.0012921051188786113
......................................................................CTAAGTACTAGTGCCGCAGGAGA............................................................................................................................................................................2311128.00112885828463015016
......................................................................CTAAGTACTAGTGCCGCAGGAT.............................................................................................................................................................................221740.0074061295741147
........................................................................AAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................201663.006635522451000
......................................................................CTAAGTACTAGTGCCGCAGGT..............................................................................................................................................................................211621.0062151214651110
.......................................................................TAAGTACTAGTGCCGCAGGAGT............................................................................................................................................................................221558.005584261416246810
......................................................................CTAAGTACTAGTGCCGCAG................................................................................................................................................................................191464.0046439402128147
...................................................................................................................CCTGCTGCCCAAGTGCTTATCA................................................................................................................................221369.003691521743491035
......................................................................CTAAGTACTAGTGCCGCAGGAGC............................................................................................................................................................................231364.00364895212221314
.....................................................................CCTAAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................231349.0034920715111250
...................................................................................................................CCTGCTGCCCAAGTGCTTATC.................................................................................................................................211340.0034040892132599
.......................................................................TAAGTACTAGTGCCGCAGG...............................................................................................................................................................................191259.0025925313200
......................................................................CTAAGTACTAGTGCCGCAGGAGTT...........................................................................................................................................................................241199.001991011223251721
........................................................................AAGTACTAGTGCCGCAGGA..............................................................................................................................................................................191198.00198179000190
..................................................................................................................TCCTGCTGCCCAAGTGCTTATC.................................................................................................................................221111.001111472330352
......................................................................CTAAGTACTAGTGCCGCA.................................................................................................................................................................................181109.00109590202820
.........................................................................AGTACTAGTGCCGCAGGAG.............................................................................................................................................................................191107.001079312281
...................................................................................................................CCTGCTGCCCAAGTGCTTAT..................................................................................................................................201104.00104180394205
.....................................................................CCTAAGTACTAGTGCCGCAGGA..............................................................................................................................................................................22190.009067000230
.......................................................................TAAGTACTAGTGCCGCAGGAGA............................................................................................................................................................................22188.00888401030
.......................................................................TAAGTACTAGTGCCGCAGGAA.............................................................................................................................................................................21181.00818000010
......................................................................CTAAGTACTAGTGCCGCAGGAGG............................................................................................................................................................................23176.007658203103
......................................................................CTAAGTACTAGTGCCGCAGT...............................................................................................................................................................................20176.00766704401
......................................................................CTAAGTACTAGTGCCGCAGGG..............................................................................................................................................................................21170.0070192108310
..........................................................................GTACTAGTGCCGCAGGAG.............................................................................................................................................................................18168.00685800271
......................................................................CTAAGTACTAGTGCCGCAGGAAA............................................................................................................................................................................23166.00665303613
......................................................................CTAAGTACTAGTGCCGCAGTT..............................................................................................................................................................................21157.00575301210
......................................................................CTAAGTACTAGTGCCGCAGGC..............................................................................................................................................................................21154.0054132162201
..................................................................................................................TCCTGCTGCCCAAGTGCTTAT..................................................................................................................................21151.0051250111500
......................................................................CTAAGTACTAGTGCCGCAGGTT.............................................................................................................................................................................22147.00473605510
......................................................................CTAAGTACTAGTGCCGCAGGAGTC...........................................................................................................................................................................24144.00443501233
.......................................................................TAAGTACTAGTGCCGCAGGT..............................................................................................................................................................................20143.00434300000
......................................................................CTAAGTACTAGTGCCGCAGGAGTTT..........................................................................................................................................................................25143.004319191004
..................................................................................................................TCCTGCTGCCCAAGTGCTTATCA................................................................................................................................23140.00403011350
.......................................................................TAAGTACTAGTGCCGCAG................................................................................................................................................................................18137.00373502000
.......................................................................TAAGTACTAGTGCCGCAGGAT.............................................................................................................................................................................21134.00343400000
........................................................................AAGTACTAGTGCCGCAGGAGT............................................................................................................................................................................21132.00322500070
....................................................................................................................CTGCTGCCCAAGTGCTTATCA................................................................................................................................21127.00271723230
.........................................................................AGTACTAGTGCCGCAGGA..............................................................................................................................................................................18126.00262300030
......................................................................CTAAGTACTAGTGCCGCAGTTT.............................................................................................................................................................................22125.00252400100
......................................................................CTAAGTACTAGTGCCGCAGGAGAA...........................................................................................................................................................................24124.00242101101
......................................................................CTAAGTACTAGTGCCGCAGTC..............................................................................................................................................................................21124.00242201100
............................................................................................TTAGGGTTGTGTCCGCAATGCCT......................................................................................................................................................23120.0020122690
..................................................................................................................TCCTGCTGCCCAAGTGCTT....................................................................................................................................19120.00200012800
.......................................................................TAAGTACTAGTGCCGCAGGAGC............................................................................................................................................................................22119.00194002130
......................................................................CTAAGTACTAGTGCCGCAGGCT.............................................................................................................................................................................22115.0015114900
........................................................................AAGTACTAGTGCCGCAGG...............................................................................................................................................................................18115.00151400010
......................................................................CTAAGTACTAGTGCCGCAGAG..............................................................................................................................................................................21114.0014600413
....................................................................................................................CTGCTGCCCAAGTGCTTATC.................................................................................................................................20113.0013302440
...................................................................................................................CCTGCTGCCCAAGTGCTTATCT................................................................................................................................22113.0013205600
......................................................................CTAAGTACTAGTGCCGCAGA...............................................................................................................................................................................20113.00131000021
.....................................................................CCTAAGTACTAGTGCCGCAGGAGT............................................................................................................................................................................24112.0012900030
..................................................................................................................TCCTGCTGCCCAAGTGCTTA...................................................................................................................................20112.0012304500
......................................................................CTAAGTACTAGTGCCGCAGGTC.............................................................................................................................................................................22111.0011602201
.......................................................................TAAGTACTAGTGCCGCAGGAGTT...........................................................................................................................................................................23110.0010800020
......................................................................CTAAGTACTAGTGCCGCAT................................................................................................................................................................................19110.0010900100
.......................................................................TAAGTACTAGTGCCGCAGGAC.............................................................................................................................................................................21110.0010400150
droVir3
TTATAGTACTACATAGAACATAGTTTTAG-TTTGTGACC------AG---------GACATATTGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTTGTGTCCGCAATGCCTCCTGCTGCCCAAGTGCTTATTAAAGCGACTAGTTTTCCACC----------AG-----------------------CAAC----------------------AAT------TAG---AAATGTACTTTATTTA-TT-T--TAATTTAT-TSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
......................................................................CTAAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................221189339.0018933916676939793265355125341302024839000177391114955131381310391695819384781365395146107305134188912379952353022800315182118152200521222559011078105991431045629121586354469749171146313108331417518124141720
......................................................................CTAAGTACTAGTGCCGCAGGA..............................................................................................................................................................................21139011.0039011372051339629546261420004270248612202609225711938211619741632226227345200179420024000041400100001010340235222454407710890211341129411281281188103
......................................................................CTAAGTACTAGTGCCGCAGGAGT............................................................................................................................................................................23112371.001237113891643135040309200016179855461430860881590315312421367946501110200001600000001023131340181137103823831210018222005411
.......................................................................TAAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................2114762.0047625193152903100210001309451134987338511511330161810350300011200000000000000000111755111101700010003000000
......................................................................CTAAGTACTAGTGCCGCAGG...............................................................................................................................................................................2013691.00369117342018412002051000956018674629138216491103353834600300002600000000101010012442638113001100003314202300
......................................................................CTAAGTACTAGTGCCGCAGGAA.............................................................................................................................................................................2211375.0013750430360200000000170117531058862095130021227681100000001000000000000000000041593600000000010000000
.......................................................................TAAGTACTAGTGCCGCAGGA..............................................................................................................................................................................2011225.001225101053500000000002521913115010150001011130000000000000000000000000000361100200000000000100
......................................................................CTAAGTACTAGTGCCGCAGGAGA............................................................................................................................................................................2311216.001216620395270000000000153574610746580639700021845160000000000100000001000000109612000100002023301000
......................................................................CTAAGTACTAGTGCCGCAGGAT.............................................................................................................................................................................2211081.0010814933817640000000000614921393828138460003051050100000000000000000000010816757000100038130000010
......................................................................CTAAGTACTAGTGCCGCAGGAGTT...........................................................................................................................................................................241728.0072816724010000000010752448934690561000001050240100000000000000000010000006522100000000000000000
......................................................................CTAAGTACTAGTGCCGCAGGAC.............................................................................................................................................................................221693.00693543562997000000000013407361718000000102000000000000000000000002132472400000001006000000
......................................................................CTAAGTACTAGTGCCGCAGGT..............................................................................................................................................................................211679.00679310155100010000007057255350230454600021724301000003000000000000000000011021100000000012000000
......................................................................CTAAGTACTAGTGCCGCAG................................................................................................................................................................................191545.005453201802000000000043301748372702132001102126000000020000000000000011002158300000004000000000
...................................................................................................................CCTGCTGCCCAAGTGCTTATT.................................................................................................................................211537.00537564600000000000684027546527110258010004721100000000000000000000000201007100100000001000000
...................................................................................................................CCTGCTGCCCAAGTGCTTATTA................................................................................................................................221533.005330029300000000009538266565290777310010532800000100000000000000000001008300000000000000000
.......................................................................TAAGTACTAGTGCCGCAGGAGT............................................................................................................................................................................221529.005293518712000001000053233154242702228000011317000000010000000000000000011035600000002000000000
..................................................................................................................TCCTGCTGCCCAAGTGCTTATT.................................................................................................................................221453.0045310520000000000056332448423306262000106221100000000000000000010000002109400000000000100000
......................................................................CTAAGTACTAGTGCCGCAGGAGTTT..........................................................................................................................................................................251340.0034000200000000000055402037232702455000011014010000000000000000000000000024601000000000000000
........................................................................AAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................201337.003370126660000010000786633047000001132000000000000000000000000000011100000000000000000
..................................................................................................................TCCTGCTGCCCAAGTGCTTAT..................................................................................................................................211281.00281012801000000000272482635190504100000025400000000000000000000000000009100000000000000000
.......................................................................TAAGTACTAGTGCCGCAGG...............................................................................................................................................................................191181.00181001690000000000001120000200000100100000000000000000000000000004000000000000000000
......................................................................CTAAGTACTAGTGCCGCA.................................................................................................................................................................................181147.001470040000000000001812101789010700010222100000000000000000000000000008000000000000000000
...................................................................................................................CCTGCTGCCCAAGTGCTTAT..................................................................................................................................201146.001460060000000000013136102660272200001112400000001000000000000000000005200000000000000000
......................................................................CTAAGTACTAGTGCCGCAGGAGC............................................................................................................................................................................231139.0013948113400000000008631155029000001000000000000000000000001000000524200000000000000000
.....................................................................CCTAAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................231139.00139007060000000000793256071400000030100000000000000000000000101004000000000000000000
......................................................................CTAAGTACTAGTGCCGCAGGC..............................................................................................................................................................................211120.001201050000000000010141151230241000000000000000100000000000000000000033000000000000000000
......................................................................CTAAGTACTAGTGCCGCAGT...............................................................................................................................................................................201118.001180435000000000008661144098000001312000000000000000000000000000015000000000100000000
......................................................................CTAAGTACTAGTGCCGCAGGG..............................................................................................................................................................................21191.009112281350000000000531021011000000001000000000000000010000000010014200000000000000000
........................................................................AAGTACTAGTGCCGCAGGA..............................................................................................................................................................................19190.009000800000000000022121100000000000000000000000000000000000000001000000000000000000
.........................................................................AGTACTAGTGCCGCAGGAG.............................................................................................................................................................................19185.008500760000000000012121000100000000000000000000000000000000000001000000000000000000
..................................................................................................................TCCTGCTGCCCAAGTGCTTATTA................................................................................................................................23179.00790060000000000087410612081000000000400000000000000000000000000013000000000000000000
..................................................................................................................TCCTGCTGCCCAAGTGCTT....................................................................................................................................19170.0070001900000000000544664045000000000010000000000000000000000000012000000000000000000
......................................................................CTAAGTACTAGTGCCGCAGGAAA............................................................................................................................................................................23164.006402210000000000072180505500000000100000000000000000000000000005200000000000000000
......................................................................CTAAGTACTAGTGCCGCAGGAGAA...........................................................................................................................................................................24161.006102170000000000063392004500000201200000000000000000000000000103100000000000000000
....................................................................................................................CTGCTGCCCAAGTGCTTATTA................................................................................................................................21159.005900500000000000435283018600000100000000000000000000000000000001100200000000000000
..........................................................................GTACTAGTGCCGCAGGAG.............................................................................................................................................................................18159.005900500000000000013010100100000000000000000000000000000000000011000000000000000000
..................................................................................................................TCCTGCTGCCCAAGTGCTTA...................................................................................................................................20158.005800600000000000461151093000012002000000020000000000000000000015000000000000000000
............................................................................................TTAGGTTTGTGTCCGCAATGCCT......................................................................................................................................................23151.0051011200000000000101031004900000000000000000000000010101021000200000000001000100000
......................................................................CTAAGTACTAGTGCCGCAGGAGTC...........................................................................................................................................................................24150.005041111000000000025031501700000002200000000000000000000000000000200000000030000000
......................................................................CTAAGTACTAGTGCCGCAGGAGG............................................................................................................................................................................23148.004819190000000000022031400000000000000000000000000000000000000016000000000000000000
.......................................................................TAAGTACTAGTGCCGCAGGAGA............................................................................................................................................................................22147.004700390000000000002100001200000000000000000000000000000000000000100000000000000001
...................................................................................................................CCTGCTGCCCAAGTGCTTATTC................................................................................................................................22147.004700120000000000012016307600000001400000000000000000000000000000000400000000000000
....................................................................................................................CTGCTGCCCAAGTGCTTATT.................................................................................................................................20142.004200120000000000061233204300001001000000000000000000000000000004000000000000000000
...................................................................................................................CCTGCTGCCCAAGTGCTTATTT................................................................................................................................22140.004010300000000000522730011600000000000000000000000000000000000000000000000000000000
..................................................................................................................TCCTGCTGCCCAAGTGCTTATTC................................................................................................................................23136.00360080000000000001140406300000002500000000000000000000000000000000200000000000000
.......................................................................TAAGTACTAGTGCCGCAGGAGTT...........................................................................................................................................................................23135.00350190000000000054311201500000000000000000000000000000000000012000000000000000000
......................................................................CTAAGTACTAGTGCCGCAGGAGTTTT.........................................................................................................................................................................26134.00340010000000000052652403400000000000000000000000000000000000002000000000000000000
.....................................................................CCTAAGTACTAGTGCCGCAGGA..............................................................................................................................................................................22134.003400291000000000010100000100000100000000000000000000000000000000000000000000000000
..................................................................................................................TCCTGCTGCCCAAGTGCTTATTT................................................................................................................................23133.00330040000000000006013109700000001100000000000000000000000000000000000000000000000
......................................................................CTAAGTACTAGTGCCGCAGGTT.............................................................................................................................................................................22131.003101170000000000020011200200000000000000000000000000000000000005000000000000000000
.......................................................................TAAGTACTAGTGCCGCAGGAA.............................................................................................................................................................................21127.002700190000000000001102301000000000000000000000000000000000000000000000000000000000
......................................................................CTAAGTACTAGTGCCGCAGGCT.............................................................................................................................................................................22125.002503000000000000000001210000000000000000000000000000000000000018000000000000000000
......................................................................CTAAGTACTAGTGCCGCAGTT..............................................................................................................................................................................21125.00250070000000000024400100500000000000000000000000000000000000002000000000000000000
.......................................................................TAAGTACTAGTGCCGCAGGAT.............................................................................................................................................................................21124.002401180000000000011000100100000000000000000000000000000000000000001000000000000000
...................................................................................................................CCTGCTGCCCAAGTGCTTATTAA...............................................................................................................................23124.00240000000000000042054101500000001000000000000000000000000000000100000000000000000
......................................................................CTAAGTACTAGTGCCGCAGGAGTTA..........................................................................................................................................................................25123.00230040000000000022010201600000100000000000000000000000000000013000000000000000000
.......................................................................TAAGTACTAGTGCCGCAG................................................................................................................................................................................18121.002100150000000000001100101000000000100000000000000000000000000001000000000000000000
......................................................................CTAAGTACTAGTGCCGCAT................................................................................................................................................................................19121.00210070000000000032123001100000000000000000000000000000000000001000000000000000000
........................................................................AAGTACTAGTGCCGCAGGAGT............................................................................................................................................................................21121.002100140000000000031010100000000000000000000000000000000000000001000000000000000000
.........................................................................AGTACTAGTGCCGCAGGA..............................................................................................................................................................................18118.001800160000000000011000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................CCTGCTGCCCAAGTGCTTA...................................................................................................................................19117.00170010000000000020023102400000010000000000000000000000000000001000000000000000000
.......................................................................TAAGTACTAGTGCCGCAGGT..............................................................................................................................................................................20115.001500140000000000000010000000000000000000000000000000000000000000000000000000000000
......................................................................CTAAGTACTAGTGCCGCAGGAGTAT..........................................................................................................................................................................25115.00150000000000000031110202200000000000000000000000000000000000002100000000000000000
............................................................................................TTAGGTTTGTGTCCGCAATGC........................................................................................................................................................21114.00140010000000000041011000100000000200000000000000000000000000003000000000000000000
......................................................................CTAAGTACTAGTGCCGCAGGAGTCT..........................................................................................................................................................................25114.00140120000000000023010001400000000000000000000000000000000000000000000000000000000
......................................................................CTAAGTACTAGTGCCGCAGA...............................................................................................................................................................................20113.00130080000000000010001000000000000000000000000000000000000000003000000000000000000
......................................................................CTAAGTACTAGTGCCGCAGGAGTTC..........................................................................................................................................................................25113.00130151000000000010000000300000000000000001000000000000000000000000000000001000000
.......................................................................TAAGTACTAGTGCCGCAGGAC.............................................................................................................................................................................21113.00132530000000000001000000000000000000000000000000000000000000002000000000000000000
......................................................................CTAAGTACTAGTGCCGCAGGAGTA...........................................................................................................................................................................24112.00120040000000000021020000101000100000000000000000000000000000000000000000000000000
.................................................................................................................CTCCTGCTGCCCAAGTGCTTATT.................................................................................................................................23111.00110031000000000001100103100000000000000000000000000000000000000000000000000000000
..................................................................................................................TCCTGCTGCCCAAGTGCTTATC.................................................................................................................................22111.00110030000000000011000102200000010000000000000000000000000000000000000000000000000
......................................................................CTAAGTACTAGTGCCGCAGGCC.............................................................................................................................................................................22111.00110200000000000000000010000000000000000000000000000000000001007000000000000000000
........................................................................AAGTACTAGTGCCGCAGG...............................................................................................................................................................................18111.001100110000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................TAAGTACTAGTGCCGCAGGAGTTT..........................................................................................................................................................................24110.00100000000000000000040201100000000000000000000000000000000000002000000000000000000
......................................................................CTAAGTACTAGTGCCGCAGGAGTTAA.........................................................................................................................................................................26110.00100000000000000030021100200000000000000000000000000000000000001000000000000000000
.........................................................................AGTACTAGTGCCGCAGGAGT............................................................................................................................................................................20110.00100090000000000000000000100000000000000000000000000000000000000000000000000000000
droGri2
TTA-------------------C-TTGAGCTTGA----------------------TGCGTATTGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTTGTGTCCGCAATGCCTCCTGCTGCCCAAGTGCTTATTAAGGCGACGAATTTTCCAAC----------AA-----------------------TGTGCG------------------------------AGTGAA-AG------T---CCTTT-T--TGTTTTTT-TSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
......................................................................CTAAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................22114573.0014573132141359
......................................................................CTAAGTACTAGTGCCGCAGGA..............................................................................................................................................................................2114088.0040883988100
.......................................................................TAAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................2111253.001253122231
......................................................................CTAAGTACTAGTGCCGCAGGAGT............................................................................................................................................................................231553.0055353914
......................................................................CTAAGTACTAGTGCCGCAGG...............................................................................................................................................................................201491.0049148110
.......................................................................TAAGTACTAGTGCCGCAGGA..............................................................................................................................................................................201373.003733694
.......................................................................TAAGTACTAGTGCCGCAGGAGT............................................................................................................................................................................221143.001431367
......................................................................CTAAGTACTAGTGCCGCAGGAT.............................................................................................................................................................................22194.0094913
......................................................................CTAAGTACTAGTGCCGCAGGAGA............................................................................................................................................................................23173.0073730
........................................................................AAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................20173.0073730
......................................................................CTAAGTACTAGTGCCGCAGGAA.............................................................................................................................................................................22161.0061592
......................................................................CTAAGTACTAGTGCCGCAG................................................................................................................................................................................19158.0058580
......................................................................CTAAGTACTAGTGCCGCA.................................................................................................................................................................................18155.0055550
.......................................................................TAAGTACTAGTGCCGCAGG...............................................................................................................................................................................19140.0040400
...................................................................................................................CCTGCTGCCCAAGTGCTTATT.................................................................................................................................21128.0028271
........................................................................AAGTACTAGTGCCGCAGGA..............................................................................................................................................................................19126.0026260
......................................................................CTAAGTACTAGTGCCGCAGGT..............................................................................................................................................................................21125.0025250
......................................................................CTAAGTACTAGTGCCGCAGGAGTT...........................................................................................................................................................................24123.0023221
......................................................................CTAAGTACTAGTGCCGCAGGAC.............................................................................................................................................................................22120.0020173
..................................................................................................................TCCTGCTGCCCAAGTGCTTATT.................................................................................................................................22120.0020200
......................................................................CTAAGTACTAGTGCCGCAGGAGG............................................................................................................................................................................23120.0020200
.....................................................................CCTAAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................23118.0018180
........................................................................AAGTACTAGTGCCGCAGGAGT............................................................................................................................................................................21114.0014131
...................................................................................................................CCTGCTGCCCAAGTGCTTATTA................................................................................................................................22114.0014131
......................................................................CTAAGTACTAGTGCCGCAGGAGC............................................................................................................................................................................23112.0012102
..........................................................................GTACTAGTGCCGCAGGAG.............................................................................................................................................................................18112.0012120
.........................................................................AGTACTAGTGCCGCAGGAG.............................................................................................................................................................................19111.0011101
.......................................................................TAAGTACTAGTGCCGCAGGAT.............................................................................................................................................................................21110.0010100
.......................................................................TAAGTACTAGTGCCGCAGGAGTT...........................................................................................................................................................................23110.001091
.......................................................................TAAGTACTAGTGCCGCAGGAGA............................................................................................................................................................................2218.00880
........................................................................AAGTACTAGTGCCGCAGGAGTT...........................................................................................................................................................................2215.00550
..................................................................................................................TCCTGCTGCCCAAGTGCTTAT..................................................................................................................................2115.00550
......................................................................CTAAGTACTAGTGCCGCAGGAGTTT..........................................................................................................................................................................2514.00440
.........................................................................AGTACTAGTGCCGCAGGA..............................................................................................................................................................................1814.00440
......................................................................CTAAGTACTAGTGCCGCAGT...............................................................................................................................................................................2014.00440
.....................................................................CCTAAGTACTAGTGCCGCAGGA..............................................................................................................................................................................2214.00440
......................................................................CTAAGTACTAGTGCCGCAGGAAA............................................................................................................................................................................2314.00440
......................................................................CTAAGTACTAGTGCCGCAGTT..............................................................................................................................................................................2114.00440
...................................................................................................................CCTGCTGCCCAAGTGCTTAT..................................................................................................................................2013.00330
..................................................................................................................TCCTGCTGCCCAAGTGCTTATTA................................................................................................................................2313.00330
......................................................................CTAAGTACTAGTGCCGCAGGAGGG...........................................................................................................................................................................2413.00330
......................................................................CTAAGTACTAGTGCCGCAGGAGAA...........................................................................................................................................................................2413.00330
....................................................................................................................CTGCTGCCCAAGTGCTTATT.................................................................................................................................2013.00330
.........................................................................AGTACTAGTGCCGCAGGAGT............................................................................................................................................................................2012.00220
......................................................................CTAAGTACTAGTGCCGCAGGAGGC...........................................................................................................................................................................2412.00220
.......................................................................TAAGTACTAGTGCCGCAGGAC.............................................................................................................................................................................2112.00220
.......................................................................TAAGTACTAGTGCCGCAGGAA.............................................................................................................................................................................2112.00220
......................................................................CTAAGTACTAGTGCCGCT.................................................................................................................................................................................1812.00220
.......................................................................TAAGTACTAGTGCCGCAG................................................................................................................................................................................1812.00220
......................................................................CTAAGTACTAGTGCCGCAGGG..............................................................................................................................................................................2112.00220
......................................................................CTAAGTACTAGTGCCGCAGGATC............................................................................................................................................................................2312.00220
......................................................................CTAAGTACTAGTGCCGCAGGATA............................................................................................................................................................................2312.00220
......................................................................CTAAGTACTAGTGCCGCAGGAGTG...........................................................................................................................................................................2412.00211
......................................................................CTAAGTACTAGTGCCGCAGGAGCC...........................................................................................................................................................................2412.00220
........................................................................AAGTACTAGTGCCGCAGGAGTTT..........................................................................................................................................................................2312.00211
......................................................................CTAAGTACTAGTGCCGCAGGTT.............................................................................................................................................................................2211.00110
......................................................................CTAAGTACTAGTGCCGCATT...............................................................................................................................................................................2011.00110
..................................................................................................................TCCTGCTGCCCAAGTGCTTATTT................................................................................................................................2311.00110
.......................................................................TAAGTACTAGTGCCGCAGGAGTTTT.........................................................................................................................................................................2511.00110
..........................................................................GTACTAGTGCCGCAGGAGT............................................................................................................................................................................1911.00110
......................................................................CTAAGTACTAGTGCCGCAGGC..............................................................................................................................................................................2111.00110
....................................................................................................................CTGCTGCCCAAGTGCTTATTA................................................................................................................................2111.00110
......................................................................CTAAGTACTAGTGCCGCAGA...............................................................................................................................................................................2011.00110
.......................................................................TAAGTACTAGTGCCGCAGGT..............................................................................................................................................................................2011.00110
......................................................................CTAAGTACTAGTGCCGCAGTTA.............................................................................................................................................................................2211.00110
......................................................................CTAAGTACTAGTGCCGCAGGGC.............................................................................................................................................................................2211.00110
............................................................................................TTAGGTTTGTGTCCGCAATGC........................................................................................................................................................2111.00110
......................................................................CTAAGTACTAGTGCCGCAGGAGGGG..........................................................................................................................................................................2511.00110
......................................................................CTAAGTACTAGTGCCGCAGGAAG............................................................................................................................................................................2311.00110
......................................................................CTAAGTACTAGTGCCGCAGGAGTACT.........................................................................................................................................................................2611.00110
............................................................................................TTAGGTTTGTGTCCGCAATGCCT......................................................................................................................................................2311.00110
......................................................................CTAAGTACTAGTGCCGCAGGACC............................................................................................................................................................................2311.00110
......................................................................CTAAGTACTAGTGCCGCAGGAGCCC..........................................................................................................................................................................2511.00110
.......................................................................TAAGTACTAGTGCCGCAGT...............................................................................................................................................................................1911.00110
.......................................................................TAAGTACTAGTGCCGCAGGAGTTT..........................................................................................................................................................................2411.00110
......................................................................CTAAGTACTAGTGCCGCAGGAGAC...........................................................................................................................................................................2411.00110
......................................................................CTAAGTACTAGTGCCGCAGGAGTTAGG........................................................................................................................................................................2711.00101
.......................................................................TAAGTACTAGTGCCGCAGGAGTTC..........................................................................................................................................................................2411.00110
...................................................................................................................CCTGCTGCCCAAGTGCTTATTT................................................................................................................................2211.00110
..................................................................................................................TCCTGCTGCCCAAGTGCT.....................................................................................................................................1811.00110
......................................................................CTAAGTACTAGTGCCGCAGGAGACG..........................................................................................................................................................................2511.00110
..................................................................................................................TCCTGCTGCCCAAGTGCTTATTAA...............................................................................................................................2411.00110
...........................................................................TACTAGTGCCGCAGGAGT............................................................................................................................................................................1811.00110
......................................................................CTAAGTACTAGTGCCGCAGGTA.............................................................................................................................................................................2211.00110
...................................................................................................................CCTGCTGCCCAAGTGCTT....................................................................................................................................1811.00110
......................................................................CTAAGTACTAGTGCCGCACT...............................................................................................................................................................................2011.00110
....................................................................TCCTAAGTACTAGTGCCGCAGGA..............................................................................................................................................................................2311.00110
....................................................................................................................CTGCTGCCCAAGTGCTTAT..................................................................................................................................1911.00110
......................................................................CTAAGTACTAGTGCCGCAGGAGAG...........................................................................................................................................................................2411.00110
droWil2
A-------------------------------------------------------AGCGTATTGCTTTACTAAGTACTAGTGCCGCAGGAGTTTGGTTCGTGTCCGTAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGACGACTTTACCTACTTAAAAAGCCAG-----------------------TCAGTCTATCGACTATATATTTCAAATGGAAGTAAAAGTGAA-AG------A---CA-A------------G-ASizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
......................................................................CTAAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................221171696.0017169615203452623144355789779
......................................................................CTAAGTACTAGTGCCGCAGGA..............................................................................................................................................................................21134667.003466758812096546343318004
......................................................................CTAAGTACTAGTGCCGCAGGAGT............................................................................................................................................................................23119462.0019462187261962185514739
.......................................................................TAAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................2115486.0054862042579406222041
.......................................................................TAAGTACTAGTGCCGCAGGAGT............................................................................................................................................................................2213679.003679100498174442620
......................................................................CTAAGTACTAGTGCCGCAGGAGTT...........................................................................................................................................................................2412920.0029201618334542264
......................................................................CTAAGTACTAGTGCCGCAGGAC.............................................................................................................................................................................2212420.002420221261531111
......................................................................CTAAGTACTAGTGCCGCAGG...............................................................................................................................................................................2012413.00241377112136891090
.......................................................................TAAGTACTAGTGCCGCAGGAGTT...........................................................................................................................................................................2312177.0021771912553541674
......................................................................CTAAGTACTAGTGCCGCAGGAGA............................................................................................................................................................................2311878.001878292434591543
.......................................................................TAAGTACTAGTGCCGCAGGA..............................................................................................................................................................................2011209.00120988501223316
......................................................................CTAAGTACTAGTGCCGCAGGAA.............................................................................................................................................................................2211143.0011439280944801
......................................................................CTAAGTACTAGTGCCGCAGGAT.............................................................................................................................................................................221726.00726361183068114
......................................................................CTAAGTACTAGTGCCGCAGGAGTTT..........................................................................................................................................................................251683.00683032520626
........................................................................AAGTACTAGTGCCGCAGGAGTT...........................................................................................................................................................................221635.006351244291486
.......................................................................TAAGTACTAGTGCCGCAGGAGTTT..........................................................................................................................................................................241585.00585133133517
..................................................................................................................TCCTGCTGCCCAAGTGCTTATT.................................................................................................................................221334.0033412155131135
........................................................................AAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................201282.00282619151268
........................................................................AAGTACTAGTGCCGCAGGAGTTT..........................................................................................................................................................................231262.0026211314243
........................................................................AAGTACTAGTGCCGCAGGAGT............................................................................................................................................................................211253.00253105007186
......................................................................CTAAGTACTAGTGCCGCAG................................................................................................................................................................................191246.00246371471655
...................................................................................................................CCTGCTGCCCAAGTGCTTATTA................................................................................................................................221189.0018914415687
......................................................................CTAAGTACTAGTGCCGCAGGAGC............................................................................................................................................................................231167.0016779118132
......................................................................CTAAGTACTAGTGCCGCAGGT..............................................................................................................................................................................211126.001268481069
......................................................................CTAAGTACTAGTGCCGCAGGAAA............................................................................................................................................................................231124.0012401811104
...................................................................................................................CCTGCTGCCCAAGTGCTTATT.................................................................................................................................211123.001236623745
............................................................................................TTTGGTTCGTGTCCGTAATACC.......................................................................................................................................................221111.001118724810
.......................................................................TAAGTACTAGTGCCGCAGG...............................................................................................................................................................................191108.001080921213
......................................................................CTAAGTACTAGTGCCGCAGGAGG............................................................................................................................................................................231105.0010513490043
......................................................................CTAAGTACTAGTGCCGCAGGG..............................................................................................................................................................................211105.0010553113236
..................................................................................................................TCCTGCTGCCCAAGTGCTTAT..................................................................................................................................211100.001001290169
............................................................................................TTTGGTTCGTGTCCGTAATACCT......................................................................................................................................................23182.00825280202
......................................................................CTAAGTACTAGTGCCGCAGAG..............................................................................................................................................................................21173.00730601057
.................................................................................................................CTCCTGCTGCCCAAGTGCTTATT.................................................................................................................................23172.0072132502014
.........................................................................AGTACTAGTGCCGCAGGAG.............................................................................................................................................................................19169.0069355029
.................................................................................................................CTCCTGCTGCCCAAGTGCTTAT..................................................................................................................................22167.00672170840
......................................................................CTAAGTACTAGTGCCGCAGGAGTTTT.........................................................................................................................................................................26164.0064050059
......................................................................CTAAGTACTAGTGCCGCAGGAGTTA..........................................................................................................................................................................25159.0059020354
......................................................................CTAAGTACTAGTGCCGCAGGAGAA...........................................................................................................................................................................24158.0058130252
.......................................................................TAAGTACTAGTGCCGCAGGAGTTA..........................................................................................................................................................................24156.0056140150
..................................................................................................................TCCTGCTGCCCAAGTGCTTATTA................................................................................................................................23156.005602001125
........................................................................AAGTACTAGTGCCGCAGGA..............................................................................................................................................................................19152.0052043018
.......................................................................TAAGTACTAGTGCCGCAGGAC.............................................................................................................................................................................21152.0052407005
.......................................................................TAAGTACTAGTGCCGCAGGAGA............................................................................................................................................................................22151.00510190230
..........................................................................GTACTAGTGCCGCAGGAG.............................................................................................................................................................................18150.0050044024
......................................................................CTAAGTACTAGTGCCGCA.................................................................................................................................................................................18144.004401301318
......................................................................CTAAGTACTAGTGCCGCAGGC..............................................................................................................................................................................21143.0043101239
.......................................................................TAAGTACTAGTGCCGCAGGAA.............................................................................................................................................................................21140.00401240015
......................................................................CTAAGTACTAGTGCCGCAGGAGTAA..........................................................................................................................................................................25137.0037020035
....................................................................................................................CTGCTGCCCAAGTGCTTATT.................................................................................................................................20133.00331191111
......................................................................CTAAGTACTAGTGCCGCAGGAGTTC..........................................................................................................................................................................25132.00321110020
....................................................................................................................CTGCTGCCCAAGTGCTTATTA................................................................................................................................21132.00320120614
.....................................................................ACTAAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................23132.0032031010
..................................................................................................................TCCTGCTGCCCAAGTGCTT....................................................................................................................................19130.0030230124
......................................................................CTAAGTACTAGTGCCGCAGGAGTTG..........................................................................................................................................................................25128.0028020026
.................................................................................................................CTCCTGCTGCCCAAGTGCTT....................................................................................................................................20127.0027312021
.......................................................................TAAGTACTAGTGCCGCAGGAGTTTT.........................................................................................................................................................................25127.0027000126
......................................................................CTAAGTACTAGTGCCGCAGGACC............................................................................................................................................................................23125.0025240001
.......................................................................TAAGTACTAGTGCCGCAGGAT.............................................................................................................................................................................21125.0025516013
......................................................................CTAAGTACTAGTGCCGCAGGATA............................................................................................................................................................................23123.0023020003
......................................................................CTAAGTACTAGTGCCGCAGT...............................................................................................................................................................................20123.0023080015
.........................................................................AGTACTAGTGCCGCAGGA..............................................................................................................................................................................18121.0021017004
.......................................................................TAAGTACTAGTGCCGCAGGAGTTAA.........................................................................................................................................................................25119.0019020215
.......................................................................TAAGTACTAGTGCCGCAG................................................................................................................................................................................18118.0018018000
...................................................................................................................CCTGCTGCCCAAGTGCTTAT..................................................................................................................................20117.0017050012
............................................................................................TTTGGTTCGTGTCCGTAATAC........................................................................................................................................................21117.001791214
.......................................................................TAAGTACTAGTGCCGCAGGAGTTG..........................................................................................................................................................................24117.0017000017
......................................................................CTAAGTACTAGTGCCGCAGGAGAAA..........................................................................................................................................................................25116.0016010015
......................................................................CTAAGTACTAGTGCCGCAGGAGTA...........................................................................................................................................................................24116.001608017
.......................................................................TAAGTACTAGTGCCGCAGGAGG............................................................................................................................................................................22116.001652018
.......................................................................TAAGTACTAGTGCCGCAGGAGTTC..........................................................................................................................................................................24115.0015030012
........................................................................AAGTACTAGTGCCGCAGGAGTTA..........................................................................................................................................................................23115.0015010014
......................................................................CTAAGTACTAGTGCCGCAGGAGTTAA.........................................................................................................................................................................26115.0015000015
......................................................................CTAAGTACTAGTGCCGCAGA...............................................................................................................................................................................20114.001404019
......................................................................CTAAGTACTAGTGCCGCAGGAGTTTG.........................................................................................................................................................................26112.001202028
.............................................................................................TTGGTTCGTGTCCGTAATACC.......................................................................................................................................................21112.0012100020
.......................................................................TAAGTACTAGTGCCGCAGGAGC............................................................................................................................................................................22111.001130008
......................................................................CTAAGTACTAGTGCCGCAGGAGTG...........................................................................................................................................................................24110.001001027
.................................................................................................................CTCCTGCTGCCCAAGTGCTTA...................................................................................................................................21110.0010000010
.........................................................................AGTACTAGTGCCGCAGGAGT............................................................................................................................................................................20110.001005005
......................................................................CTAAGTACTAGTGCCGCAGGTT.............................................................................................................................................................................22110.001005005
........................................................................AAGTACTAGTGCCGCAGGAGTTTT.........................................................................................................................................................................24110.0010000010
......................................................................CTAAGTACTAGTGCCGCAGGAGTC...........................................................................................................................................................................24110.001022006
.......................................................................TAAGTACTAGTGCCGCAGGAGTTTA.........................................................................................................................................................................2519.00900027
......................................................................CTAAGTACTAGTGCCGCAGGATG............................................................................................................................................................................2319.00917001
.................................................................................................................CTCCTGCTGCCCAAGTGCTTATTA................................................................................................................................2419.00906030
..................................................................................................................TCCTGCTGCCCAAGTGCTTATTT................................................................................................................................2318.00816001
.....................................................................ACTAAGTACTAGTGCCGCAGGA..............................................................................................................................................................................2218.00815020
........................................................................AAGTACTAGTGCCGCAGGAGTTG..........................................................................................................................................................................2318.00820006
..................................................................................................................TCCTGCTGCCCAAGTGCTTA...................................................................................................................................2018.00822004
dp5
T--------------------------------------------------------------TGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCG-GTGGTCCAAC----------AG-----------------------TGAA---------------------------------------AC------G---CA-GT-G--TGATTTAG-TSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
......................................................................CTAAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................221152801.001528016609244737177986780501385481121086817
......................................................................CTAAGTACTAGTGCCGCAGGA..............................................................................................................................................................................21157342.0057342338790827877378969351084013128
......................................................................CTAAGTACTAGTGCCGCAGG...............................................................................................................................................................................20111236.0011236171907624103413491430132
......................................................................CTAAGTACTAGTGCCGCAGGAGT............................................................................................................................................................................23111159.0011159055414463161437111127130189
.......................................................................TAAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................2117063.00706345360182889510701490079
.......................................................................TAAGTACTAGTGCCGCAGGA..............................................................................................................................................................................2013296.00329603047613677919002
.......................................................................TAAGTACTAGTGCCGCAGGAGT............................................................................................................................................................................2212498.002498015696750674173440164
......................................................................CTAAGTACTAGTGCCGCAGGAC.............................................................................................................................................................................2211906.001906113155089685951012
......................................................................CTAAGTACTAGTGCCGCAGGT..............................................................................................................................................................................2111331.00133107631331121124000
......................................................................CTAAGTACTAGTGCCGCAGGAGA............................................................................................................................................................................231805.00805038540235274080169
......................................................................CTAAGTACTAGTGCCGCAGGAA.............................................................................................................................................................................221661.006610317121811512610000
.......................................................................TAAGTACTAGTGCCGCAGG...............................................................................................................................................................................191646.0064606043212142000
......................................................................CTAAGTACTAGTGCCGCAGGAGC............................................................................................................................................................................231639.00639037994787153000
......................................................................CTAAGTACTAGTGCCGCAGGAGTT...........................................................................................................................................................................241596.0059602863694816633000
......................................................................CTAAGTACTAGTGCCGCAG................................................................................................................................................................................191549.0054904428580352004
........................................................................AAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................201434.0043403644441144003
......................................................................CTAAGTACTAGTGCCGCAGGAT.............................................................................................................................................................................221421.00421126021007445002
......................................................................CTAAGTACTAGTGCCGCAGT...............................................................................................................................................................................201254.0025401401840263000
......................................................................CTAAGTACTAGTGCCGCAGTT..............................................................................................................................................................................211251.002511150091081000
........................................................................AAGTACTAGTGCCGCAGGA..............................................................................................................................................................................191229.002290180441031000
..................................................................................................................TCCTGCTGCCCAAGTGCTTATT.................................................................................................................................221214.0021401414336264000
.......................................................................TAAGTACTAGTGCCGCAGGAGTT...........................................................................................................................................................................231177.001770104122119142005
.....................................................................CCTAAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................231159.001590826582100001
......................................................................CTAAGTACTAGTGCCGCAGGTT.............................................................................................................................................................................221156.00156092054181000
........................................................................AAGTACTAGTGCCGCAGGAGT............................................................................................................................................................................211147.00147012949041000
......................................................................CTAAGTACTAGTGCCGCAGGAGTTT..........................................................................................................................................................................251137.0013708661561012002
......................................................................CTAAGTACTAGTGCCGCAGGC..............................................................................................................................................................................211120.00120090574491000
......................................................................CTAAGTACTAGTGCCGCAGGG..............................................................................................................................................................................211117.0011702216548161000
.....................................................................CCTAAGTACTAGTGCCGCAGGA..............................................................................................................................................................................221115.00115046563010000
.......................................................................TAAGTACTAGTGCCGCAGGAGC............................................................................................................................................................................22189.0089061864010000
......................................................................CTAAGTACTAGTGCCGCA.................................................................................................................................................................................18188.00880522150181000
.........................................................................AGTACTAGTGCCGCAGGAG.............................................................................................................................................................................19174.007406612032000
...................................................................................................................CCTGCTGCCCAAGTGCTTATT.................................................................................................................................21173.0073048214081000
.......................................................................TAAGTACTAGTGCCGCAGGT..............................................................................................................................................................................20170.007006105121000
.......................................................................TAAGTACTAGTGCCGCAGGAC.............................................................................................................................................................................21161.0061042413020000
..........................................................................GTACTAGTGCCGCAGGAG.............................................................................................................................................................................18155.005505302000000
......................................................................CTAAGTACTAGTGCCGCAGGAGG............................................................................................................................................................................23152.0052031311330001
........................................................................AAGTACTAGTGCCGCAGG...............................................................................................................................................................................18149.0049037011010000
......................................................................CTAAGTACTAGTGCCGCATT...............................................................................................................................................................................20148.0048028018011000
...................................................................................................................CCTGCTGCCCAAGTGCTTATTA................................................................................................................................22145.004502045790000
..................................................................................................................TCCTGCTGCCCAAGTGCTTAT..................................................................................................................................21144.004402902094000
.........................................................................AGTACTAGTGCCGCAGGA..............................................................................................................................................................................18142.004204200000000
.......................................................................TAAGTACTAGTGCCGCAGGAA.............................................................................................................................................................................21141.004103502040000
............................................................................................TTAGGTTCGTGTCCGCAATACCT......................................................................................................................................................23140.00400141031120000
.......................................................................TAAGTACTAGTGCCGCAG................................................................................................................................................................................18138.003803800000000
.......................................................................TAAGTACTAGTGCCGCAGGAGA............................................................................................................................................................................22132.003202415020000
.......................................................................TAAGTACTAGTGCCGCAGGAT.............................................................................................................................................................................21129.002902404010000
....................................................................................................................CTGCTGCCCAAGTGCTTATT.................................................................................................................................20128.002802002231000
.....................................................................CCTAAGTACTAGTGCCGCAGG...............................................................................................................................................................................21128.0028014014000000
......................................................................CTAAGTACTAGTGCCGCAGA...............................................................................................................................................................................20128.002801408060000
......................................................................CTAAGTACTAGTGCCGCAGC...............................................................................................................................................................................20127.002702220030000
......................................................................CTAAGTACTAGTGCCGCAGGAAA............................................................................................................................................................................23127.002701705030002
......................................................................CTAAGTACTAGTGCCGCAGTTT.............................................................................................................................................................................22125.002509016000000
.....................................................................CCTAAGTACTAGTGCCGCAGGAGT............................................................................................................................................................................24122.002207312000000
......................................................................CTAAGTACTAGTGCCGCAT................................................................................................................................................................................19120.002001501031000
............................................................................................TTAGGTTCGTGTCCGCAATACC.......................................................................................................................................................22120.002001131113000
......................................................................CTAAGTACTAGTGCCGCAGGACC............................................................................................................................................................................23119.00190819001000
.......................................................................TAAGTACTAGTGCCGCAGGAGTTT..........................................................................................................................................................................24118.001801300203000
.........................................................................AGTACTAGTGCCGCAGGAGT............................................................................................................................................................................20118.001801701000000
..................................................................................................................TCCTGCTGCCCAAGTGCTT....................................................................................................................................19117.00170801062000
........................................................................AAGTACTAGTGCCGCAGGAGTT...........................................................................................................................................................................22117.001701302110000
......................................................................CTAAGTACTAGTGCCGCATTT..............................................................................................................................................................................21216.003202209001000
..................................................................................................................TCCTGCTGCCCAAGTGCTTATTA................................................................................................................................23115.001501101120000
......................................................................CTAAGTACTAGTGCCGCAGGAGAA...........................................................................................................................................................................24115.00150607001001
......................................................................CTAAGTACTAGTGCCGCAGGAGTTTT.........................................................................................................................................................................26115.001501202000001
......................................................................CTAAGTACTAGTGCCGCAGGAGTA...........................................................................................................................................................................24115.001501113000000
....................................................................................................................CTGCTGCCCAAGTGCTTATTA................................................................................................................................21113.00130602500000
.......................................................................TAAGTACTAGTGCCGCAGT...............................................................................................................................................................................19113.001301300000000
.................................................................................................................CTCCTGCTGCCCAAGTGCTTATT.................................................................................................................................23113.00130614020000
......................................................................CTAAGTACTAGTGCCGCAGGAGTC...........................................................................................................................................................................24113.00130336010000
......................................................................CTAAGTACTAGTGCCGCAGGTC.............................................................................................................................................................................22113.00130507010000
..................................................................................................................TCCTGCTGCCCAAGTGCTTA...................................................................................................................................20112.00120400080000
......................................................................CTAAGTACTAGTGCCGTTT................................................................................................................................................................................191011.20112083030215000
......................................................................CTAAGTACTAGTGCCGCAGTC..............................................................................................................................................................................21111.00110208010000
...................................................................................................................CCTGCTGCCCAAGTGCTTAT..................................................................................................................................20111.00110800021000
.......................................................................TAAGTACTAGTGCCGCAGTT..............................................................................................................................................................................20110.00100901000000
...........................................................................TACTAGTGCCGCAGGAGT............................................................................................................................................................................18110.00100710200000
............................................................................................TTAGGTTCGTGTCCGCAATAC........................................................................................................................................................2119.0090500202000
droPer2
T--------------------------------------------------------------TGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCG-GTGGTCCAAC----------AG-----------------------TGAA---------------------------------------AC------G---CA-GT-G--TGATTTAG-TSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
......................................................................CTAAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................22172039.0072039291110380135791206733642
......................................................................CTAAGTACTAGTGCCGCAGGA..............................................................................................................................................................................21114202.0014202850248047873545758
......................................................................CTAAGTACTAGTGCCGCAGGAGT............................................................................................................................................................................2312508.002508491654785488261
......................................................................CTAAGTACTAGTGCCGCAGG...............................................................................................................................................................................2012171.00217107326656676101
.......................................................................TAAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................2112002.00200237671772439794
.......................................................................TAAGTACTAGTGCCGCAGGAGT............................................................................................................................................................................221508.005080214181407858
.......................................................................TAAGTACTAGTGCCGCAGGA..............................................................................................................................................................................201454.004540341064454
......................................................................CTAAGTACTAGTGCCGCAGGAC.............................................................................................................................................................................221344.0034462107093775
......................................................................CTAAGTACTAGTGCCGCAGGT..............................................................................................................................................................................211268.002680871947115
......................................................................CTAAGTACTAGTGCCGCAGGAA.............................................................................................................................................................................221244.002440713966212
......................................................................CTAAGTACTAGTGCCGCAGGAGTT...........................................................................................................................................................................241168.001680416443146
......................................................................CTAAGTACTAGTGCCGCAGGAT.............................................................................................................................................................................221132.00132457133334
......................................................................CTAAGTACTAGTGCCGCAG................................................................................................................................................................................191128.00128057127376
..................................................................................................................TCCTGCTGCCCAAGTGCTTATT.................................................................................................................................221117.00117046123470
......................................................................CTAAGTACTAGTGCCGCAGGAGA............................................................................................................................................................................231107.00107048828167
........................................................................AAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................20167.006704511290
......................................................................CTAAGTACTAGTGCCGCA.................................................................................................................................................................................18164.00640916480
......................................................................CTAAGTACTAGTGCCGCAGT...............................................................................................................................................................................20159.0059019013234
.......................................................................TAAGTACTAGTGCCGCAGG...............................................................................................................................................................................19157.00570470730
......................................................................CTAAGTACTAGTGCCGCAGGC..............................................................................................................................................................................21156.005602024300
...................................................................................................................CCTGCTGCCCAAGTGCTTATT.................................................................................................................................21143.00430807271
..................................................................................................................TCCTGCTGCCCAAGTGCTTAT..................................................................................................................................21142.004205115201
.......................................................................TAAGTACTAGTGCCGCAGGAGTT...........................................................................................................................................................................23141.00410176954
......................................................................CTAAGTACTAGTGCCGCAGGG..............................................................................................................................................................................21136.003602017170
......................................................................CTAAGTACTAGTGCCGCAGGAGC............................................................................................................................................................................23133.003307012122
......................................................................CTAAGTACTAGTGCCGCAGGAGTTT..........................................................................................................................................................................25128.0028070948
...................................................................................................................CCTGCTGCCCAAGTGCTTATTA................................................................................................................................22128.00280318160
..................................................................................................................TCCTGCTGCCCAAGTGCTT....................................................................................................................................19124.00240101220
..................................................................................................................TCCTGCTGCCCAAGTGCTTA...................................................................................................................................20122.00220205150
....................................................................................................................CTGCTGCCCAAGTGCTTATT.................................................................................................................................20121.00210504120
........................................................................AAGTACTAGTGCCGCAGGA..............................................................................................................................................................................19121.00210170310
.....................................................................CCTAAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................23121.00210130710
......................................................................CTAAGTACTAGTGCCGCAGTT..............................................................................................................................................................................21120.0020090470
......................................................................CTAAGTACTAGTGCCGCAGGTT.............................................................................................................................................................................22119.00190150310
......................................................................CTAAGTACTAGTGCCGCAGGCT.............................................................................................................................................................................22117.00171102130
........................................................................AAGTACTAGTGCCGCAGGAGT............................................................................................................................................................................21116.00160140200
............................................................................................TTAGGTTCGTGTCCGCAATACCT......................................................................................................................................................23115.0015051540
...................................................................................................................CCTGCTGCCCAAGTGCTTAT..................................................................................................................................20115.00150101130
..................................................................................................................TCCTGCTGCCCAAGTGCTTATTA................................................................................................................................23113.0013052240
....................................................................................................................CTGCTGCCCAAGTGCTTATTA................................................................................................................................21113.0013040180
.........................................................................AGTACTAGTGCCGCAGGAG.............................................................................................................................................................................19112.0012010902
......................................................................CTAAGTACTAGTGCCGTT.................................................................................................................................................................................18311.33340203290
......................................................................CTAAGTACTAGTGCCGCAGGAAA............................................................................................................................................................................23110.0010050122
.......................................................................TAAGTACTAGTGCCGCAGGAC.............................................................................................................................................................................21110.0010090100
.......................................................................TAAGTACTAGTGCCGCAGGAT.............................................................................................................................................................................2119.009060030
......................................................................CTAAGTACTAGTGCCGCAGGGT.............................................................................................................................................................................2219.009010530
............................................................................................TTAGGTTCGTGTCCGCAATACC.......................................................................................................................................................2219.009020340
..........................................................................GTACTAGTGCCGCAGGAG.............................................................................................................................................................................1818.008040301
.......................................................................TAAGTACTAGTGCCGCAGGAA.............................................................................................................................................................................2118.008040220
.......................................................................TAAGTACTAGTGCCGCAGGT..............................................................................................................................................................................2018.008040130
.......................................................................TAAGTACTAGTGCCGCAGGAGA............................................................................................................................................................................2217.007030400
......................................................................CTAAGTACTAGTGCCGCAGGAGG............................................................................................................................................................................2317.007040030
......................................................................CTAAGTACTAGTGCCGCAGGTC.............................................................................................................................................................................2217.007000340
droAna3
T--------------------------------------------------------------CGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGTCCAGC----------AAAATACAAGGAATACAAAAAACAGTGA-----------------------------------------------------------------------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
......................................................................CTAAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................221159620.0015962090544140026820739503941630
......................................................................CTAAGTACTAGTGCCGCAGGA..............................................................................................................................................................................21153029.0053029403713054022525609501
......................................................................CTAAGTACTAGTGCCGCAGGAGT............................................................................................................................................................................23120015.002001578991863856419411134
.......................................................................TAAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................2119328.009328741688495821319
......................................................................CTAAGTACTAGTGCCGCAGG...............................................................................................................................................................................2016536.0065365319382456107614
.......................................................................TAAGTACTAGTGCCGCAGGAGT............................................................................................................................................................................2213755.003755183144681201773
.......................................................................TAAGTACTAGTGCCGCAGGA..............................................................................................................................................................................2013534.0035343172508110266
......................................................................CTAAGTACTAGTGCCGCAGGAGTT...........................................................................................................................................................................2413039.00303963919742432289
......................................................................CTAAGTACTAGTGCCGCAGGAT.............................................................................................................................................................................2212240.0022401504606338629
......................................................................CTAAGTACTAGTGCCGCAGGAGTTT..........................................................................................................................................................................2511671.0016712061017231424
......................................................................CTAAGTACTAGTGCCGCAGGAGA............................................................................................................................................................................2311090.0010906529493413
......................................................................CTAAGTACTAGTGCCGCAGGAA.............................................................................................................................................................................221905.0090560220374260
......................................................................CTAAGTACTAGTGCCGCAGGT..............................................................................................................................................................................211781.007816151065793
..................................................................................................................TCCTGCTGCCCAAGTGCTTATT.................................................................................................................................221703.0070353432301133
......................................................................CTAAGTACTAGTGCCGCAGGAGC............................................................................................................................................................................231592.005922345803120249
........................................................................AAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................201588.005885403014328
.......................................................................TAAGTACTAGTGCCGCAGGAGTT...........................................................................................................................................................................231526.005261513181362
.......................................................................TAAGTACTAGTGCCGCAGG...............................................................................................................................................................................191442.004424130010019
......................................................................CTAAGTACTAGTGCCGCAG................................................................................................................................................................................191346.003462712336925
......................................................................CTAAGTACTAGTGCCGCAGGAC.............................................................................................................................................................................221333.0033316679163420
.......................................................................TAAGTACTAGTGCCGCAGGAGTTT..........................................................................................................................................................................241311.00311520336247
........................................................................AAGTACTAGTGCCGCAGGAGT............................................................................................................................................................................211287.002871772061101
......................................................................CTAAGTACTAGTGCCGCAGGTT.............................................................................................................................................................................221231.00231215002014
......................................................................CTAAGTACTAGTGCCGCA.................................................................................................................................................................................181222.00222832137198
..................................................................................................................TCCTGCTGCCCAAGTGCTTAT..................................................................................................................................211202.00202900018094
...................................................................................................................CCTGCTGCCCAAGTGCTTATTA................................................................................................................................221196.00196563281126
...................................................................................................................CCTGCTGCCCAAGTGCTTATT.................................................................................................................................211177.00177125404044
........................................................................AAGTACTAGTGCCGCAGGA..............................................................................................................................................................................191167.0016716420001
..................................................................................................................TCCTGCTGCCCAAGTGCTTATTA................................................................................................................................231156.0015667008081
.....................................................................CCTAAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................231150.00150126507012
........................................................................AAGTACTAGTGCCGCAGGAGTT...........................................................................................................................................................................221147.0014754414282
.......................................................................TAAGTACTAGTGCCGCAGGAT.............................................................................................................................................................................211139.00139117103117
......................................................................CTAAGTACTAGTGCCGCAGGAGTTTT.........................................................................................................................................................................261136.00136110014120
........................................................................AAGTACTAGTGCCGCAGGAGTTT..........................................................................................................................................................................231133.00133190022110
......................................................................CTAAGTACTAGTGCCGCAGGAGG............................................................................................................................................................................23195.009556014034
......................................................................CTAAGTACTAGTGCCGCAGGC..............................................................................................................................................................................21186.0086110032241
......................................................................CTAAGTACTAGTGCCGCAGGG..............................................................................................................................................................................21186.0086403016324
.....................................................................CCTAAGTACTAGTGCCGCAGGA..............................................................................................................................................................................22166.006645202116
.........................................................................AGTACTAGTGCCGCAGGAG.............................................................................................................................................................................19164.00646110002
.................................................................................................................CTCCTGCTGCCCAAGTGCTTATT.................................................................................................................................23164.00645440105
.......................................................................TAAGTACTAGTGCCGCAGGAA.............................................................................................................................................................................21161.006149001011
......................................................................CTAAGTACTAGTGCCGCAGGAAA............................................................................................................................................................................23155.005525001326
..........................................................................GTACTAGTGCCGCAGGAG.............................................................................................................................................................................18151.00514810002
......................................................................CTAAGTACTAGTGCCGCAGT...............................................................................................................................................................................20150.00503200756
......................................................................CTAAGTACTAGTGCCGCAGGAGTTA..........................................................................................................................................................................25150.00507000043
.......................................................................TAAGTACTAGTGCCGCAGGT..............................................................................................................................................................................20147.00474700000
.......................................................................TAAGTACTAGTGCCGCAGGAGA............................................................................................................................................................................22147.00473900008
..................................................................................................................TCCTGCTGCCCAAGTGCTT....................................................................................................................................19144.004418001709
......................................................................CTAAGTACTAGTGCCGCAGGAGTA...........................................................................................................................................................................24144.004425001018
.......................................................................TAAGTACTAGTGCCGCAGGAGC............................................................................................................................................................................22143.00432480209
......................................................................CTAAGTACTAGTGCCGCAGAG..............................................................................................................................................................................21143.004321000121
......................................................................CTAAGTACTAGTGCCGCAGGAGTTG..........................................................................................................................................................................25138.00382000234
......................................................................CTAAGTACTAGTGCCGCAGGAGTAT..........................................................................................................................................................................25138.00383002033
..................................................................................................................TCCTGCTGCCCAAGTGCTTA...................................................................................................................................20136.0036110013111
..................................................................................................................TCCTGCTGCCCAAGTGCTTATTT................................................................................................................................23135.00352700503
......................................................................CTAAGTACTAGTGCCGCAGGAGAA...........................................................................................................................................................................24133.00338000025
.........................................................................AGTACTAGTGCCGCAGGA..............................................................................................................................................................................18132.00323000002
......................................................................CTAAGTACTAGTGCCGCAGGAGTG...........................................................................................................................................................................24126.00264002416
.......................................................................TAAGTACTAGTGCCGCAG................................................................................................................................................................................18124.00242400000
....................................................................................................................CTGCTGCCCAAGTGCTTATTA................................................................................................................................21124.00241710006
......................................................................CTAAGTACTAGTGCCGCAGGAGTC...........................................................................................................................................................................24124.002411100012
......................................................................CTAAGTACTAGTGCCGCAGGAGTGT..........................................................................................................................................................................25123.00232004116
......................................................................CTAAGTACTAGTGCCGCAGGATA............................................................................................................................................................................23122.00222100001
....................................................................................................................CTGCTGCCCAAGTGCTTATT.................................................................................................................................20121.00211411113
.......................................................................TAAGTACTAGTGCCGCAGGAC.............................................................................................................................................................................21121.00211410213
......................................................................CTAAGTACTAGTGCCGCAGGAGTTAT.........................................................................................................................................................................26121.00212001018
........................................................................AAGTACTAGTGCCGCAGG...............................................................................................................................................................................18119.00191900000
...................................................................................................................CCTGCTGCCCAAGTGCTTAT..................................................................................................................................20119.00191200205
......................................................................CTAAGTACTAGTGCCGCAGGAGTTAA.........................................................................................................................................................................26118.00181000017
.......................................................................TAAGTACTAGTGCCGCAGGAGTTTT.........................................................................................................................................................................25118.00182000115
......................................................................CTAAGTACTAGTGCCGCAGGCT.............................................................................................................................................................................22117.00170001313
............................................................................................TTAGGTTCGTGTCCGCAATACCT......................................................................................................................................................23115.0015410253
.......................................................................TAAGTACTAGTGCCGCAGGAGTTA..........................................................................................................................................................................24115.00153000012
......................................................................CTAAGTACTAGTGCCGCAGGAGTTTTT........................................................................................................................................................................27115.00153000012
.........................................................................AGTACTAGTGCCGCAGGAGT............................................................................................................................................................................20115.00151500000
......................................................................CTAAGTACTAGTGCCGCAGTT..............................................................................................................................................................................21214.50292500112
......................................................................CTAAGTACTAGTGCCGCAGA...............................................................................................................................................................................20114.00141300001
.......................................................................TAAGTACTAGTGCCGCAGGAGG............................................................................................................................................................................22114.00141200002
.......................................................................TAAGTACTAGTGCCGCAGGTT.............................................................................................................................................................................21114.00141300100
.................................................................................................................CTCCTGCTGCCCAAGTGCTTAT..................................................................................................................................22114.0014310208
.....................................................................CCTAAGTACTAGTGCCGCAGGAGT............................................................................................................................................................................24113.00131100002
droBip1
T--------------------------------------------------------------CGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGTCCAGC----------GAAATACA---AACACAAGAAACA------------------------------------------------------------------------G-TSizeHit CountTotal NormTotal
No Reads
droKik1
T--------------------------------------------------------------CGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGATGCCCAACCTGCTAGCCCAG-----------------------TGAAAGAA--------------------------------------------------------TGATTCATCTSizeHit CountTotal NormTotal
No Reads
droFic1
T--------------------------------------------------------------CGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCCTATCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGACGAGTTGTCCATC----------AA-----------------------TGAAGAAG-------------------------------------------TGACC------AGTGATTC----SizeHit CountTotal NormTotal
No Reads
droEle1
----------------------------------------------------------------GCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGTCCAAC----------AT-----------------------TGAATAAG-------------------------------------------CGAC------------TTC-C-GSizeHit CountTotal NormTotal
No Reads
droRho1
T--------------------------------------------------------------CGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGTCCAAC----------AG-----------------------TGAAAAAG-------------------------------------------TGACT------CCCATTT----TSizeHit CountTotal NormTotal
No Reads
droBia1
T--------------------------------------------------------------CGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAAGTTGTCCAC----------CG-----------------------CAAG----------------------TGA------GAGAGAA-AG------TGACC---------GGTTCGG-TSizeHit CountTotal NormTotal
No Reads
droTak1
T--------------------------------------------------------------CACTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGTCCATC----------AG-----------------------TATG--------------------------------AGTGAA-AA------A---CA-GTGAAGTGATTCCA-ASizeHit CountTotal NormTotal
No Reads
droEug1
T--------------------------------------------------------------CGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGTGCAAC----------AAAG------AAATGA-----AAA--------C-------------------------------------------CCACT------AGTATTTC----SizeHit CountTotal NormTotal
No Reads
dm3
T--------------------------------------------------------------CGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGC----------AAAA------GAATAC-----ACG--------C-------------------------------------------TGCTC------AGTGTTT-----SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
......................................................................CTAAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................2211677515.0016775150000310048317101606361631653396576283364612401216018695571301123992743787113030131611078724424426515522444813788242492925312224984339050074636095000000000000000001115874506715863094294026597639816431364630811091906145019677445318770447403162031822212751118191691739999605339061171200212321297138222274050505434148555249201651203813169182391392114603349023971613741112271537128943226644777965154662496524011045282171228137150240612788701228060873183597713442151271507890481181713332175341096329316254852234181241148155537671000611670211120002011771262000154612456961098121113365384362512881136310112572906100877313042882132513838072108003909329225480171208141264163671213143593135410348804121020457589486141572025906419506141342888159034115735935588955208481690260126110983571826349146310675242810435121529231451333533532952696250577733901438154962707961594807382437964127744328827479485102176998451340718253851871215782064177221194089543719144116761323810154117661061292622346706129600
......................................................................CTAAGTACTAGTGCCGCAGGA..............................................................................................................................................................................211292967.00292967000068586206381632311119828941898460110151790162492811364181427834387483051563274106416212891308022311202136400000000000000000122084980911519424115515162129710182312323256688622490262389193112603310168837154629119178275186148138122438689812751134025469713634701741489031961165122956172020054030015001525253220000832140523616857432280050801873104730993962468346611288997112650135682604461610936610542771439530029050100000126000000102747257990209229128204190598223510179160582538122421919410017417319686168758865441293452743010514322119546806184832405121011023413721242896598462300371401038259422805092791477291241834894843695241292102600259336223690247484945415314481031422113117071761358142933272495431303430778785643121436102457217580
......................................................................CTAAGTACTAGTGCCGCAGGAGT............................................................................................................................................................................23195901.0095901000012835202101062342651232018800122011416814748361304972231907700270312411123331000132744511000000000000000000000015022698641552085541286343247011252417251517464549301887119921252514314662585844722562351525521016721555929931334127019201010000002020016033291320010000147057131203193907703411796191138957142616788166731378240201901572818403141010001001500000013100000307049262638562536310087246133234625590666720021551140064515290146845424281211444379319268600140343447990156302100510517263118723347149611695268346273118881716671887276022132557577572412531277167117916669187910101452108800648116987150134406917798822363390658526212002142496110
......................................................................CTAAGTACTAGTGCCGCAGG...............................................................................................................................................................................20129496.00294960000631100001322231178346003043010456733121115855370100020104000001100001841500000000000000000010014211010125893181075198102768894238231151082052301863935197274420121012377510239154449020829842481768520112001111001000000154010200000100600753452504231576483271483307985071031686380035101227470520004020000000100000020151256234261423833234216142768325895000012168532801335103304492238929111655871260485320119050232871147337313001515682668014536828759168037129082330450458819416245300890109958126201271565224921089511019781931430
.......................................................................TAAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................21129169.0029169000023300020013716000022410013048125148265170490090000130711101330000040000000000000000000000303101217432254195736108318911466949413848182027752162495271522867681128055161103711111610400100000011030001110970102000001700311102423030128935712121217729414118721021041601210234213722041110008010000000100100001096863252187612181814212176141485141829918640000314471501821192113251723861611300891711420211191041102591002652713933352811466263158388286218213184533554426967284326061222291430125233102281681383021903381822140234092921258143161119138243475713490
.......................................................................TAAGTACTAGTGCCGCAGGAGT............................................................................................................................................................................22113066.001306600002010002002225004300012001543413109991200000000000100000000007210000000000000000000002430171062302132264563811567355883492643211431822201043588781921111120971902913026000000000000000010012200001000060010006777050566711615125354513428000052117920100000010000000000000020142542610128157126499556832839000085038142850471311527530830048536850571840113010312635151137041108181241212808722326719322719150501002401422772103043001430541182151380515155925347347031432551220
......................................................................CTAAGTACTAGTGCCGCAGGAGTT...........................................................................................................................................................................24110353.0010353000051000001023701000010000303649577601500000000201000010000004639800000000000000000000084012833102311212472152011202822124592124007152276181705083170901490000000000000000000135040000000340100714130435133436910882405647111239102073119310000000000000000000000422334477662361584403338500004612698290421786339203701231053880152130060004961742410534011320118904321025425928607310001001001213266125004101016207617132242030120137113146439567127546601070
..................................................................................................................TCCTGCTGCCCAAGTGCTTATT.................................................................................................................................2219799.0097990000365000420090006100101100109419012410000000000010000000000061330000000000000000000001056135625449326817518646688147641121489663543271310281672523185668702692301313942108211112105000000000000000000006000000000300021119718508740435137419710137314012030301231610000020000000000000000602215042351205212711670000160101811051241762190030433051100140003211331162001030281506322913120014020001705111128001000130615170445831327059013180
......................................................................CTAAGTACTAGTGCCGCAGGAGA............................................................................................................................................................................2318838.0088380000323001203060401400000000000000000000000003000000000000000000000000000000001002300251470491842131083394213315317116412016550108072172213028024028187513683147000100000010000000001200000000020002018333501055229110158752131401634529016100113132320100000000000000000000020031843422133115367416616063373340214004102411420014411527275100110292601461002100247778010102011111401112314211314704630300001401319692000430044041773786033598961634714201733257480
......................................................................CTAAGTACTAGTGCCGCAGGT..............................................................................................................................................................................2117923.007923000070000000011141200000401000000000000001000000000000000000000000000000000000000152032090315550170726001051819112926023201011018315030304171461371420000000000000000000016000000000100100260457601362411265643642081531212800000920000000000000000000000000010421132931132534121000001101434160161823292400011930027000200024619831000110032608424310190001001000030341220000004014160101223522911111105021110
......................................................................CTAAGTACTAGTGCCGCA.................................................................................................................................................................................1817782.007782000000000000000303100004000451211252438171900000000000100000000001453000000000000000000020561013733324212584514611361127327321610693191441313771725030700011001116826130033000000100000000050000000000000005868504374475542130251272703611352034000916206000000000000000000400000432077500210000186664150000211434511043614006027011401050092366181504000100311180175395134170002223000040511603000030102020302323205111031510
......................................................................CTAAGTACTAGTGCCGCAGGAA.............................................................................................................................................................................2217128.0071280000137221111378111628519394010050000000000000100000010000011100000000000000000000000000017400121126022124733043116602323057573371181413244337763731308045136013334033000000000002000000001610000000000006035798601582230541682125020150152067000101733010000401000000020000000111297731371372024919720442000251295210011276206140004116311414100500058016221305011501907013698911814504010312111601125161100140015016121310017250325171720020055120
......................................................................CTAAGTACTAGTGCCGCAGGAT.............................................................................................................................................................................2216792.00679200009100034111280300000100300000000000000001100000000010000000000000000000000000112316301712612021456364401302725823311195112313310903016040246270376283800000000000000000000150000000001202011851636073513555916115710923230502060140313100010000000002000000200054101669415609271526527411200981281617017161173425003414919135100060001331027121503020513628064594653176127940110102401342780000001060605017127341426670103070
...................................................................................................................CCTGCTGCCCAAGTGCTTATTA................................................................................................................................2216255.006255000052101302313000110000200410143692740000000000000000000000004800000000000000000000002240633182640918315261181273497102145249947458084526861189117110028513020110289362200000000000000000000100000000130900613011305630111818937961410616169140004057710000000000000001000000055503100011010113001600005303321003141537002051105400120004137122012000104152109128161200010000304032761100200170471211101208240109506510
.......................................................................TAAGTACTAGTGCCGCAGGA..............................................................................................................................................................................2013460.003460000021000000030003000002001121238644421000000000000000100000011100000000000000000000083000027000171115313001353158129204121001066238250902341802332130000000000000000000004000000000000200702600512714605244681312316113893000203191001000020000000000000000220120620656213155628251280000210131513051236821100108130113001400003310127220010003111502145285965013100010040391650001002801104050467134758023034410
...................................................................................................................CCTGCTGCCCAAGTGCTTATT.................................................................................................................................2113348.0033480000600010000300011000040001012226537220000000000000000000000180000000000000000000000165006512202513192380151122303212082633524587254553291401881305312016216160000000000000000000000000000000000009477030181095402568133924112220400125200000000000000000000000010012210000020172010000002023140441218090020160710010000211756611500101515450976450004000000301413260000002501641101115230303902560
..................................................................................................................TCCTGCTGCCCAAGTGCTTATTA................................................................................................................................2313169.0031690000110000211120000000002001120625801000000000000100000000055200000000000000000000022103870114045274982101313023731342398130263404462915214331709501030402303122000000000000000000002000000000007000515903001144641653361565000004051000000000000000000000001000002010100009001400004101330033802000004002000000004112000000020020263130000010000100166000000103020201100023001004610
..................................................................................................................TCCTGCTGCCCAAGTGCTTAT..................................................................................................................................2112996.0029960000131000000000002100003003040562501000000000000000000000013213000000000000000000000420000053014860311762738002132459811417426612677101140019300050102622737000000000000000000005000000000003100485603410992705743503960101035511000003010000000000000010005330001011031060000011777011113105002011201100020000115651001001242205231781000010200003002130101003020300022924724033050160
......................................................................CTAAGTACTAGTGCCGCAGGC..............................................................................................................................................................................2112468.002468000010000000000010000000000000000000000010000100000000000000000000000000000000006010401000080310205003035011242001000002173511333280262192701474610000000000000000000010000000000000001726230845605544316192911000010000000000000000000000000101010000000000101000000002401302132520700212050250000000117232110002002000712412610010001000100639300000040103050018205220921920
......................................................................CTAAGTACTAGTGCCGCAG................................................................................................................................................................................1912106.002106000000000000001202000008000431422151000000000001000000000001107000000000000000000002450151014012112272563105002854893557116162233307110630207000113200010000000000000100400001000000010023178014340221925413162114000211110200001000000000000000040001112113121210248170000010685140256608008071514200030021166730000000002205151835450010000000001391000000105000106541043461204110
......................................................................CTAAGTACTAGTGCCGCAGGAGC............................................................................................................................................................................2312058.0020580000220001010103001000000010000000001000000000000000000000000000000000000000000011109301003151101185171012816223248580050252210125030426020340000000000000000010040000000000050101947020641861571419222936000005000000000000000000000000011107220013030061761515500120122523011230672140010016280690006000136761100010300112300125362706502400202105096770011001202221821105154208181580402112310
......................................................................CTAAGTACTAGTGCCGCAGGG..............................................................................................................................................................................2111994.001994000070000002100001000000000000000000000000000000010000000000000000000000000000001270002030100192004031200810632551291111022237537200801218051911000000000000000000000000000000000000144406081306119127629070900010321000000000000000000000000000610000000011166600001015116011038420100020142100200000000282100200001122304511292100210000002012420010002011102002220115020930
......................................................................CTAAGTACTAGTGCCGCAGGAC.............................................................................................................................................................................2211723.0017230000550004040207000000000000000000001000100000000000000000000000000000000000000020121205000149039220030274422150000001030164030428072840000000000000000000061001000002001009415002701310202268914420001144001000000100000010100000011031410013521526810461300110102501311848012001352500301004000027414221110010277360454031411400331032030220710272000000100822246035312910650302780
......................................................................CTAAGTACTAGTGCCGCAGGAGTTT..........................................................................................................................................................................2511705.001705000010000000000202000000000000000000000000000000000000000000000000000000000000001000003020240092300671204890000100110210000010402600000000000000000000100000000000000001114809102151117134515154366000302200000000000000000200000000007111123261010301300000111242041557040011112016000100019121020001006180132344042000000010030246140010009053143250353683512724200450143180
.......................................................................TAAGTACTAGTGCCGCAGGAGTT...........................................................................................................................................................................2311602.001602000050000000041000000000001130000000000000000000000000001400000000000000000000004003001811032001134114535149781220030000410530104020303400000000000000000000600000000000010015130921131002541015120001023200000000000000000000000000323111232251190009100002205161704364111700816110631001000016316210201000074120325483326000100010010411834200000260421404208717461212093168240
......................................................................CTAAGTACTAGTGCCGCAGGAGTATC.........................................................................................................................................................................2611599.0015990000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000946653000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................CTGCTGCCCAAGTGCTTATTA................................................................................................................................2111396.001396000020000001020000000000000351968232031000000000000000000000053100000000000000000000021613128000882120250112161805272890200111720421002010303300000000000000000000200000000000410028190124338424712420224153800000210000000000000000000000002130000000000113027000003002400218200001003023000000018725100000018120014341700100000001000165700000020203010072010003301100
......................................................................CTAAGTACTAGTGCCGCAGT...............................................................................................................................................................................201912.009120000100000000004000000040000000000010000000000000000000000000000000000000000000020000010011400413002580269010000110024000000010210000000000000000000010000000000000007523013525533362900000400100000000000000000000030205001005043201070000010004700054702000050005000000003170000000005020111462401000000000001100000000032001054315132011220
......................................................................CTAAGTACTAGTGCCGCAGGAGAC...........................................................................................................................................................................241838.00838000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010010000005000000000000000000000000000000000000000000000000000000000000000020000000000100000000000000000000000000000000000000000000000027103532252000000000000000000000000000000000000000000000000000000000000000000000000000000000000100002000000
.................................................................................................................CTCCTGCTGCCCAAGTGCTTATT.................................................................................................................................231726.007260000000000000100000000000010202200000000000000000000000000000000000000000000000011094237100571011430061019245131130100200016003000020101123000000000000000000000000000000100000111009002630226180000106100000000000000000000000003001100001000010009000010010800304000010010000001010110740010001050200010000100000000000018000000300021001120000080820
......................................................................CTAAGTACTAGTGCCGCAGGAGG............................................................................................................................................................................231680.00680000010000000010000000000000000000000000000000000000000000000000000000000000000002001001072061013150025132714101120001251520605510040320000000000000000000011000000000000001925090031165631493325000101400000000000000000000000000000000101000034611000010083505062612002167003000000027450000000002150825322840000000000100100000000005032202222101001101130
.......................................................................TAAGTACTAGTGCCGCAGGAGC............................................................................................................................................................................221635.0063500007100010001100000010000000000000000000000000000000000000000000000000000000000120050114040719023931201512210326599201302003502000000100000000000000000000000000000000000000006120400000000104000009000000000000000000000000000000000000000100400000000020001300000000000000100000020000000005050113130000000000000011000000100000002710001030300
......................................................................CTAAGTACTAGTGCCGCAGGTT.............................................................................................................................................................................221630.006300000400000000004010000000010000000000000000000000000000000000000000000000000000000010010100500202001090051000010010041000100030210000000000000000000000000000000000001944408310112613417100001200000000000000000000000000000000202000003400000000000000312010000020000000000021000000000000000220100100000001000100000000000000011100102000000
......................................................................CTAAGTACTAGTGCCGCAGTT..............................................................................................................................................................................211608.00608000000000000000400100000000000000000000000000000000000000000000000000000000000000000000000000052300009126100000000003000010001020000000000000000000001000000000000000346403820241449150000000000000000000000000000000000210030120110103100000000020004504000000000000000000121000000000010000020000000000000000000000000000000610000000110
............................................................................................TTAGGTTCGTGTCCGCAATACCT......................................................................................................................................................231588.0058800000000000000100000000000011825610000000000000001000000021000000000000000000000000032000000100313001218082800000100102000020102010000000000000000000002000000000200000101406214625220547700021700000001000000000000000001004620200010022370000240300001170100002000100010000418600000000003017351128210001004011102010002201419330741151043212010330
........................................................................AAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................201578.0057800000000000000010000000001232100000000000000000000000000000000000000000000000000000004020002102312001190221631000000000011010003010010000000000000000000020000000006003001413091146314839294610700031150000000000000000000000001100101100000003175500000004400102501001003012000100004113060000211133016767011000000020111240010004010001021011110030770
....................................................................................................................CTGCTGCCCAAGTGCTTATT.................................................................................................................................201551.00551000000000000000000000001000910231350100000000000000000000004000000000000000000000002000001000014004030040908242100000002003100032102012000000000000000000000000000000000000114309121111929171116452280000030010000000000000000000000101000000100000200000000000150016600000002001000000002155000201001010125740000000000000132000000200110001900101030310
......................................................................CTAAGTACTAGTGCCGCAGGAAA............................................................................................................................................................................231531.005310000010000000000000000000000000000000000000000000000000000000000000000000000000070000010000700605000018022400000000013001014601043000000000000000000001000000000000000256701400131571312603310001041100000000000000000000000010000000120001000610000000510104180200002900000000000200000000100000018481200000000000001000000004000501036031045080910
..................................................................................................................TCCTGCTGCCCAAGTGCTTA...................................................................................................................................201472.00472000030000000000000000000000011105000000000000000000000000000000000000000000000000210000600005001530000166015132010011001002001000008119000000000000000000001000000000000003640400155110130700200054000000000000000000000000001012100000000100300000004101000210040000240000000000001310111000011101118161300010100001024000000001000101002511123030540
.....................................................................CCTAAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................231414.004140000300000001300010000000005120000000000000000000000000000010000000000000000000000000000000000021000000002000000000001001000204023000000000000000000001000000000000000312509185429303616668500000220000000000000000000000000310402000000003260000001044001000000001120120001000050140000000220102423401200001000014101000000000030201722301010530
............................................................................................TTAGGTTCGTGTCCGCAATACC.......................................................................................................................................................221380.0038000000000000000000000000000011500000000000000000000000000000000000000000000000000000000000000000001000000001000000000000000002000420000000000000000000050000000000000000401011023152538100000200000000010000000000000010000200000011022210000010120010011000000000000000000551211000201002001111911000100000110066100100008045911013241071878010320
......................................................................CTAAGTACTAGTGCCGCAGGAGAA...........................................................................................................................................................................241371.00371000000000000010000000000000000000000000000000000000000000000000000000000000000000000202010130051400001101860001000131200000130102300000000000000000000000000000000000092905213621185212500000600100000000000000000000000200000004020083042000000242000370200100130000001000031000000000010300856100000000000102041000000000040403395102101301760
......................................................................CTAAGTACTAGTGCCGCATTT..............................................................................................................................................................................211335.003350000000000000001000000000000000000000000000000000000000000000000000000000000000020000010001200600000090200000000010000000000000000000000000000000000000000000000000001017400147142806427122000000000000000000000000000000000000000000000010100000001000000100000000010000000000000000000000000010100000000000000020000000000000000110010000000
......................................................................CTAAGTACTAGTGCCGCATT...............................................................................................................................................................................201327.0032700000000000000000000000000000000000000000000000000000000000000000000000000000000000000200001003110002902010000001100000000000000000000000000000000000000000000000000012280234027063311000000000000000000000000000000000000000000010010000000000000000500002000001000000002000000000000000111450000000000000060000000000000001700000020110
......................................................................CTAAGTACTAGTGCCGCAGGAGTA...........................................................................................................................................................................241320.003200000000000000001000000000000000000000000000000000000000000000000000000000000000000000010102100301002011080400300001401202000400020000000000000000000000000000000000000434044348981936121100001110000000000000000000000000000200000000010000101000000010001128020000240000001000020000000000000101654200000000000000100000001010101031910113020510
..................................................................................................................TCCTGCTGCCCAAGTGCTT....................................................................................................................................191308.0030800000000000000000000000000102141200000000000000000000000010000000000000000000000010000400001005050002006101200000000002000020104211000000000000000000003000000000000000240100111142100030003032100000000000000000000000000001100000000000200000011730001190000001400000000000217500000001101011812121600100100004000040000000020011001831001010120
............................................................................................TTAGGTTCGTGTCCGCAATAC........................................................................................................................................................211307.003070000000000000000000000000000120000000000000000000000000001000000000000000000000001000000000000000200103000000000000002100010000000000000000000090000003000000000000000212020053331266430000012000000000000000000000000000000010001000000010000000140000130000000000000010000011001000000001001917131401100000005049000000001010204052432956000000
.......................................................................TAAGTACTAGTGCCGCAGG...............................................................................................................................................................................191303.00303000000000000000010000000000120000000000000000000000000000000000000000000000000000000102000000010200009148310200000100120003010000000000000000000000000000000000000000053305112335292022100013400000000000000000000000010103100000100032550000000021011118010000030000000000032320000000010300425300000000001001700000000021100001130001020110
......................................................................CTAAGTACTAGTGCCGCAGGCT.............................................................................................................................................................................221284.0028400000000000000000000000000000000000000000000000000000000000000000000000000000000000000300010003100030501510000000020730102010815110000000000000000000010000000000000002663013000000001000000000000000000000000000000000000100000000000310000021070301051214000013200500000000110500000010110303131140500000000100300000000000000000100001000000
.......................................................................TAAGTACTAGTGCCGCAGGAGA............................................................................................................................................................................221283.0028300002000010001000100000000000000000000000000000000000000000000000000000000000000200000500015000200002408254200000002000100020000040000000000000000000000000000000000000220101514031505500000130000000000000000000000000000000000000011911242100000001000060200300500000000000201100000000201001011000000010010201200000020000000010000010150230
...................................................................................................................CCTGCTGCCCAAGTGCTTAT..................................................................................................................................201280.00280000000000000010000000000001000000000000000000000000000002000000000000000000000000000107000130143200141811424280001010300400000000301100000000000000000000000000000000000071901207344031900000025000000000000000000000000000000000000000100100000000100000300000001011000000002172000100011000225010000000000102142000000200001000510000050430
......................................................................CTAAGTACTAGTGCCGTT.................................................................................................................................................................................181264.002640000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000001412000090125000000000030010000000000000000000000000000000000000000000003250122035088133280000100000000000000000000000000010000001000001020000000014000014000000000100000000011100000000004001121620350002040000001130000000000000000910000030000
......................................................................CTAAGTACTAGTGCCGCAGGAGTTA..........................................................................................................................................................................251250.00250000000000000000000000000000010000000000000000000000000005610000000000000000000000000002000020020000171500110100000100010000000101000000000000000000000000000000000000041202001302160440001060000000000000000000000000000000000002000000010000015001068030000120000000000020010000000000201610812000000100000003200000030000080438310310401110
.........................................................................AGTACTAGTGCCGCAGGAG.............................................................................................................................................................................191245.0024500000000000000010000000000014334100000000000000000000000000000000000000000000000200000401050002020020130714362000000120120000010001000000000000000000000100000000000000054082128434221110001042000000000000000000000001000110000100001113300000000000000200000001000000100002010110000001220101280001000001000121000000002000100001002020300
......................................................................CTAAGTACTAGTGCCGCAGGATC............................................................................................................................................................................231230.00230000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000001000000000000000000100000000000000000000000000000000000000000020100000000000000000000000000000000000000000000000000000000012015363000000000000002000010000000000000010000000000000100000000000000000000000000000000000000000000000
......................................................................CTAAGTACTAGTGCCGCAGTTT.............................................................................................................................................................................221213.0021300001000000000000000000000000000000000000000100000000000000000000000000000000000000100001001000010010000210000000000100000000002000000000000000000000000000000000000001590112003030304000000000000000000000000000000000010001011110164100000000100000001000000001000000000000000000000000001010000000000000000000000001000000000000000000
.......................................................................TAAGTACTAGTGCCGCAGGAGTTT..........................................................................................................................................................................241207.00207000000000000111000000000000000000000000000000000000000000000000000000000000000000000001000010030200005013180000000000000000000100000000000000000000000000000000000000000000034012202000020131000000000000000000000000000100001103001600700000001510101520000004000000000000020000000000010028650000000000000025000000101000202191000301401330
droSim2
T--------------------------------------------------------------CGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGC----------AAAA------GAATAC-----ACG--------G-------------------------------------------TGCTC------AGTGCTT-----SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
......................................................................CTAAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................22118865.001886519676471612162434809018345153174303412962172266106
......................................................................CTAAGTACTAGTGCCGCAGGA..............................................................................................................................................................................21115675.001567577814927105653410244113925051856135320346366
......................................................................CTAAGTACTAGTGCCGCAG................................................................................................................................................................................1916581.0065819211421235620520011015003
......................................................................CTAAGTACTAGTGCCGCAGG...............................................................................................................................................................................2016285.006285259582192294541316338141504013
......................................................................CTAAGTACTAGTGCCGCA.................................................................................................................................................................................1814047.0040473203215381501016000001
......................................................................CTAAGTACTAGTGCCGCAGGAGT............................................................................................................................................................................2312207.00220730816536129481140196732324010136
......................................................................CTAAGTACTAGTGCCGCAGGAT.............................................................................................................................................................................221957.00957838847140010001703011
......................................................................CTAAGTACTAGTGCCGCAGGAC.............................................................................................................................................................................221560.00560449931220000000202000
.......................................................................TAAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................211462.00462123273177454000096002120
.......................................................................TAAGTACTAGTGCCGCAGGAGT............................................................................................................................................................................221255.0025560121025190100005300003
......................................................................CTAAGTACTAGTGCCGCAGGAGTT...........................................................................................................................................................................241242.00242205466135200006101011
......................................................................CTAAGTACTAGTGCCGCAGGAGA............................................................................................................................................................................231159.00159521222900900204904000
.......................................................................TAAGTACTAGTGCCGCAGGA..............................................................................................................................................................................201149.001498206255871130101000
...................................................................................................................CCTGCTGCCCAAGTGCTTATTA................................................................................................................................221119.0011900021190000001600000
......................................................................CTAAGTACTAGTGCCGCAGGG..............................................................................................................................................................................211111.001117422190010000400000
..................................................................................................................TCCTGCTGCCCAAGTGCTTA...................................................................................................................................20179.0079000077200000000000
......................................................................CTAAGTACTAGTGCCGCAGGAGG............................................................................................................................................................................23169.00693527610000000000000
..................................................................................................................TCCTGCTGCCCAAGTGCTTAT..................................................................................................................................21164.0064300525400000000000
.......................................................................TAAGTACTAGTGCCGCAGG...............................................................................................................................................................................19155.0055400644100000000000
.......................................................................TAAGTACTAGTGCCGCAG................................................................................................................................................................................18153.0053000205100000000000
..................................................................................................................TCCTGCTGCCCAAGTGCTTATT.................................................................................................................................22147.0047710802601100300000
......................................................................CTAAGTACTAGTGCCGCAGGAGC............................................................................................................................................................................23145.0045199540020010401000
......................................................................CTAAGTACTAGTGCCGCAGGT..............................................................................................................................................................................21145.00452810150000000001000
..................................................................................................................TCCTGCTGCCCAAGTGCTTATTA................................................................................................................................23143.0043000023610000400000
...................................................................................................................CCTGCTGCCCAAGTGCTTATT.................................................................................................................................21143.0043610233100000000000
.......................................................................TAAGTACTAGTGCCGCAGGAGTT...........................................................................................................................................................................23142.0042601042100000900100
......................................................................CTAAGTACTAGTGCCGCAGGAA.............................................................................................................................................................................22140.0040820220020000303000
....................................................................................................................CTGCTGCCCAAGTGCTTATTA................................................................................................................................21130.0030000012200000700000
...................................................................................................................CCTGCTGCCCAAGTGCTTAT..................................................................................................................................20128.0028000022600000000000
........................................................................AAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................20122.0022310140300001000000
......................................................................CTAAGTACTAGTGCCGCAGGAGTTA..........................................................................................................................................................................25119.0019000021600000100000
..................................................................................................................TCCTGCTGCCCAAGTGCT.....................................................................................................................................18117.0017000001700000000000
.......................................................................TAAGTACTAGTGCCGCAGGAC.............................................................................................................................................................................21116.0016105000000000001000
...................................................................................................................CCTGCTGCCCAAGTGCTTA...................................................................................................................................19114.0014000001400000000000
......................................................................CTAAGTACTAGTGCCGCAGGAGAA...........................................................................................................................................................................24113.001361020000000004000
......................................................................CTAAGTACTAGTGCCGCAGT...............................................................................................................................................................................20113.0013101020000000000000
............................................................................................TTAGGTTCGTGTCCGCAATACC.......................................................................................................................................................22112.001220100701000100000
............................................................................................TTAGGTTCGTGTCCGCAATAC........................................................................................................................................................21112.0012101000100000000000
..................................................................................................................TCCTGCTGCCCAAGTGCTT....................................................................................................................................19111.001120012600000000000
......................................................................CTAAGTACTAGTGCCGCAGGAGTTT..........................................................................................................................................................................25110.001010000020000400021
.......................................................................TAAGTACTAGTGCCGCAGGAT.............................................................................................................................................................................2119.00990000000000000000
.................................................................................................................CTCCTGCTGCCCAAGTGCTTATT.................................................................................................................................2319.00941000200000200000
.......................................................................TAAGTACTAGTGCCGCAGGAGG............................................................................................................................................................................2219.00944100000000000000
........................................................................AAGTACTAGTGCCGCAGGA..............................................................................................................................................................................1919.00900040400000100000
............................................................................................TTAGGTTCGTGTCCGCAATACCT......................................................................................................................................................2318.00840100000100200000
............................................................................................TTAGGTTCGTGTCCGCAATACCTC.....................................................................................................................................................2416.00600000600000000000
.......................................................................TAAGTACTAGTGCCGCAGGAGC............................................................................................................................................................................2216.00641100000000000000
......................................................................CTAAGTACTAGTGCCGCAGTT..............................................................................................................................................................................2116.00641010000000000000
......................................................................CTAAGTACTAGTGCCGCAC................................................................................................................................................................................1915.00541000000000000000
......................................................................CTAAGTACTAGTGCCGCAGGC..............................................................................................................................................................................2115.00550000000000000000
.........................................................................AGTACTAGTGCCGCAGGAG.............................................................................................................................................................................1915.00520000300000000000
......................................................................CTAAGTACTAGTGCCGCAGGCT.............................................................................................................................................................................2214.00410000000000300000
......................................................................CTAAGTACTAGTGCCGCAGGTT.............................................................................................................................................................................2214.00411020000000000000
....................................................................................................................CTGCTGCCCAAGTGCTTA...................................................................................................................................1814.00400001300000000000
.......................................................................TAAGTACTAGTGCCGCAGGAA.............................................................................................................................................................................2114.00400040000000000000
............................................................................................TTAGGTTCGTGTCCGCAATA.........................................................................................................................................................2014.00410010101000000000
...........................................................................................GTTAGGTTCGTGTCCGCAATACCTC.....................................................................................................................................................2513.00320000100000000000
........................................................................AAGTACTAGTGCCGCAGG...............................................................................................................................................................................1813.00300010200000000000
.......................................................................TAAGTACTAGTGCCGCAGGAGA............................................................................................................................................................................2213.00301010000000100000
......................................................................CTAAGTACTAGTGCCGCAGGAAA............................................................................................................................................................................2313.00300010010000001000
........................................................................AAGTACTAGTGCCGCAGGAGT............................................................................................................................................................................2113.00301010000000100000
..........................................................................GTACTAGTGCCGCAGGAG.............................................................................................................................................................................1813.00310010100000000000
.............................................................................CTAGTGCCGCAGGAG.............................................................................................................................................................................1513.00300000000003000000
.............................................................................................TAGGTTCGTGTCCGCAATACC.......................................................................................................................................................2113.00301000200000000000
....................................................................................................................CTGCTGCCCAAGTGCTTATT.................................................................................................................................2012.00201000100000000000
......................................................................CTAAGTACTAGTGCCGCAGGATC............................................................................................................................................................................2312.00220000000000000000
.....................................................................CCTAAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................2312.00200020000000000000
......................................................................CTAAGTACTAGTGCCGCAGC...............................................................................................................................................................................2012.00220000000000000000
........................................................................AAGTACTAGTGCCGCAGGAGTT...........................................................................................................................................................................2212.00210000100000000000
......................................................................CTAAGTACTAGTGCCGCAGGGC.............................................................................................................................................................................2212.00211000000000000000
......................................................................CTAAGTACTAGTGCCGCAGGAGTC...........................................................................................................................................................................2412.00220000000000000000
......................................................................CTAAGTACTAGTGCCGCAGAG..............................................................................................................................................................................2112.00201010000000000000
.................................................................................................................CTCCTGCTGCCCAAGTGCTTA...................................................................................................................................2112.00200000200000000000
....................................................................................................................CTGCTGCCCAAGTGCTTAT..................................................................................................................................1912.00200000200000000000
............................................................................ACTAGTGCCGCAGGAG.............................................................................................................................................................................1612.00200000000002000000
.................................................................................................................CTCCTGCTGCCCAAGTGCTTATTA................................................................................................................................2412.00200010100000000000
......................................................................CTAAGTACTAGTGCCG...................................................................................................................................................................................1612.00200000000002000000
......................................................................CTAAGTACTAGTGCCGCG.................................................................................................................................................................................1811.00101000000000000000
droSec2
T--------------------------------------------------------------CGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGC----------AAAA------GAATAC-----ACC--------G-------------------------------------------TGCTC------AGTGCTTCGA-TSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
......................................................................CTAAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................221187152.00187152454541864315441107614
......................................................................CTAAGTACTAGTGCCGCAGGA..............................................................................................................................................................................21137258.003725813456201894220842
......................................................................CTAAGTACTAGTGCCGCAGGAGT............................................................................................................................................................................23116434.00164344483108541210454
.......................................................................TAAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................2116044.00604431572882862313
......................................................................CTAAGTACTAGTGCCGCAGG...............................................................................................................................................................................2014691.0046911994195522450
......................................................................CTAAGTACTAGTGCCGCAGGAGTT...........................................................................................................................................................................2412119.002119272214401593
.......................................................................TAAGTACTAGTGCCGCAGGAGT............................................................................................................................................................................2211552.0015525778055840
.......................................................................TAAGTACTAGTGCCGCAGGA..............................................................................................................................................................................2011148.0011488702514239
......................................................................CTAAGTACTAGTGCCGCAGGAGA............................................................................................................................................................................2311063.0010634133916595
......................................................................CTAAGTACTAGTGCCGCAGGAA.............................................................................................................................................................................2211019.001019344366633
......................................................................CTAAGTACTAGTGCCGCAGGAGTTT..........................................................................................................................................................................251771.0077170804617
......................................................................CTAAGTACTAGTGCCGCAGGAT.............................................................................................................................................................................221589.00589396136174
......................................................................CTAAGTACTAGTGCCGCAGGT..............................................................................................................................................................................211485.00485199151270
......................................................................CTAAGTACTAGTGCCGCAGGAGC............................................................................................................................................................................231323.00323592522217
..................................................................................................................TCCTGCTGCCCAAGTGCTTATT.................................................................................................................................221269.0026912685130
......................................................................CTAAGTACTAGTGCCGCAG................................................................................................................................................................................191268.0026812952132
.......................................................................TAAGTACTAGTGCCGCAGGAGTT...........................................................................................................................................................................231210.00210401412144
........................................................................AAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................201173.001731571015
......................................................................CTAAGTACTAGTGCCGCAGGAC.............................................................................................................................................................................221150.001505617671
......................................................................CTAAGTACTAGTGCCGCAGGG..............................................................................................................................................................................211147.001471202124
..................................................................................................................TCCTGCTGCCCAAGTGCTTAT..................................................................................................................................211142.001421571119
.......................................................................TAAGTACTAGTGCCGCAGG...............................................................................................................................................................................191140.001401211117
...................................................................................................................CCTGCTGCCCAAGTGCTTATT.................................................................................................................................211124.001243541372
......................................................................CTAAGTACTAGTGCCGCA.................................................................................................................................................................................181102.00102111486
..................................................................................................................TCCTGCTGCCCAAGTGCTT....................................................................................................................................19198.009805192
......................................................................CTAAGTACTAGTGCCGCAGT...............................................................................................................................................................................20192.0092335153
...................................................................................................................CCTGCTGCCCAAGTGCTTATTA................................................................................................................................22191.00911452052
.....................................................................CCTAAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................23187.0087582522
.......................................................................TAAGTACTAGTGCCGCAGGAGTTT..........................................................................................................................................................................24180.0080134261
......................................................................CTAAGTACTAGTGCCGCAGGAAA............................................................................................................................................................................23174.0074233048
......................................................................CTAAGTACTAGTGCCGCAGGAGG............................................................................................................................................................................23172.0072533313
......................................................................CTAAGTACTAGTGCCGCAGAG..............................................................................................................................................................................21163.0063322326
......................................................................CTAAGTACTAGTGCCGCAGGAGAA...........................................................................................................................................................................24160.006062052
.......................................................................TAAGTACTAGTGCCGCAGGAT.............................................................................................................................................................................21157.005754102
..................................................................................................................TCCTGCTGCCCAAGTGCTTA...................................................................................................................................20157.005710155
..................................................................................................................TCCTGCTGCCCAAGTGCTTATTA................................................................................................................................23152.0052181726
......................................................................CTAAGTACTAGTGCCGCAGGTT.............................................................................................................................................................................22151.0051331017
......................................................................CTAAGTACTAGTGCCGCAGGAGTAT..........................................................................................................................................................................25150.005016043
............................................................................................TTAGGTTCGTGTCCGCAATACCT......................................................................................................................................................23147.00471013177
......................................................................CTAAGTACTAGTGCCGCAGGAGTTA..........................................................................................................................................................................25145.004533138
......................................................................CTAAGTACTAGTGCCGCAGGAGTA...........................................................................................................................................................................24144.0044183023
......................................................................CTAAGTACTAGTGCCGCAGGC..............................................................................................................................................................................21141.004122532
......................................................................CTAAGTACTAGTGCCGCAGGAGTTTT.........................................................................................................................................................................26140.004042034
.......................................................................TAAGTACTAGTGCCGCAGGAGA............................................................................................................................................................................22135.003531004
............................................................................................TTAGGTTCGTGTCCGCAATACC.......................................................................................................................................................22134.0034810214
........................................................................AAGTACTAGTGCCGCAGGAGT............................................................................................................................................................................21129.002926003
............................................................................................TTAGGTTCGTGTCCGCAATAC........................................................................................................................................................21129.0029611012
...................................................................................................................CCTGCTGCCCAAGTGCTTAT..................................................................................................................................20129.002960221
....................................................................................................................CTGCTGCCCAAGTGCTTATT.................................................................................................................................20127.002771217
........................................................................AAGTACTAGTGCCGCAGGA..............................................................................................................................................................................19126.002623003
.......................................................................TAAGTACTAGTGCCGCAGGAA.............................................................................................................................................................................21125.002519006
.........................................................................AGTACTAGTGCCGCAGGAG.............................................................................................................................................................................19125.002519024
......................................................................CTAAGTACTAGTGCCGCAGA...............................................................................................................................................................................20122.0022120010
....................................................................................................................CTGCTGCCCAAGTGCTTATTA................................................................................................................................21122.002270312
......................................................................CTAAGTACTAGTGCCGCAGTT..............................................................................................................................................................................21121.002114016
.......................................................................TAAGTACTAGTGCCGCAGGAGC............................................................................................................................................................................22119.001952012
.......................................................................TAAGTACTAGTGCCGCAGGT..............................................................................................................................................................................20117.001714003
..........................................................................GTACTAGTGCCGCAGGAG.............................................................................................................................................................................18116.001613012
.....................................................................CCTAAGTACTAGTGCCGCAGGA..............................................................................................................................................................................22113.001310003
......................................................................CTAAGTACTAGTGCCGCAGTTT.............................................................................................................................................................................22113.001311002
......................................................................CTAAGTACTAGTGCCGCAGGAGTTAA.........................................................................................................................................................................26110.00100208
......................................................................CTAAGTACTAGTGCCGCAGGGT.............................................................................................................................................................................2219.0094203
......................................................................CTAAGTACTAGTGCCGCAGGAGTTTA.........................................................................................................................................................................2618.0080008
.......................................................................TAAGTACTAGTGCCGCAG................................................................................................................................................................................1817.0077000
.................................................................................................................CTCCTGCTGCCCAAGTGCTTATT.................................................................................................................................2317.0072032
......................................................................CTAAGTACTAGTGCCGTT.................................................................................................................................................................................1827.001410013
..................................................................................................................TCCTGCTGCCCAAGTGCTTATTAA...............................................................................................................................2416.0063012
.......................................................................TAAGTACTAGTGCCGCAGGAGTTA..........................................................................................................................................................................2416.0060006
.........................................................................AGTACTAGTGCCGCAGGAGT............................................................................................................................................................................2016.0066000
......................................................................CTAAGTACTAGTGCCGCAGC...............................................................................................................................................................................2016.0063003
droYak3
T--------------------------------------------------------------CGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGC----------AAAA------GAATAC-----ACA--------G-------------------------------------------TGCGC------AGTGCTTC----SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
......................................................................CTAAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................22194623.009462392940954807943931308624234288387500
......................................................................CTAAGTACTAGTGCCGCAGGA..............................................................................................................................................................................21117306.001730621411350870328145827163592153
......................................................................CTAAGTACTAGTGCCGCAGGAGT............................................................................................................................................................................2315585.00558515433167253063316101380140
.......................................................................TAAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................2113960.0039603931632767243372490000
......................................................................CTAAGTACTAGTGCCGCAGG...............................................................................................................................................................................2011846.001846361030759216450300000
.......................................................................TAAGTACTAGTGCCGCAGGA..............................................................................................................................................................................201919.00919385695182170000
......................................................................CTAAGTACTAGTGCCGCAGGAC.............................................................................................................................................................................221855.0085534625410195950000
.......................................................................TAAGTACTAGTGCCGCAGGAGT............................................................................................................................................................................221830.008303850016842304840000
......................................................................CTAAGTACTAGTGCCGCAGGAGA............................................................................................................................................................................231576.00576144276022172780010
......................................................................CTAAGTACTAGTGCCGCAGGAT.............................................................................................................................................................................221494.0049422316370266870000
......................................................................CTAAGTACTAGTGCCGCAGGAA.............................................................................................................................................................................221385.003855270204374540000
......................................................................CTAAGTACTAGTGCCGCAGGAGTT...........................................................................................................................................................................241353.00353718848371639180000
......................................................................CTAAGTACTAGTGCCGCAGGT..............................................................................................................................................................................211302.003022118700365620000
..................................................................................................................TCCTGCTGCCCAAGTGCTTATT.................................................................................................................................221225.0022512171101102010000
........................................................................AAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................201225.002254216200300000
......................................................................CTAAGTACTAGTGCCGCAGGAGC............................................................................................................................................................................231193.00193418141681600000
......................................................................CTAAGTACTAGTGCCGCAG................................................................................................................................................................................191175.00175318830182722130
.....................................................................CCTAAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................23188.00880651741100000
.......................................................................TAAGTACTAGTGCCGCAGGAGTT...........................................................................................................................................................................23181.00810411867630000
......................................................................CTAAGTACTAGTGCCGCAGGC..............................................................................................................................................................................21176.0076620056300000
......................................................................CTAAGTACTAGTGCCGCAGGAGTTT..........................................................................................................................................................................25174.0074248233880000
.......................................................................TAAGTACTAGTGCCGCAGG...............................................................................................................................................................................19170.0070163102300000
...................................................................................................................CCTGCTGCCCAAGTGCTTATT.................................................................................................................................21164.0064145335700000
......................................................................CTAAGTACTAGTGCCGCAGGG..............................................................................................................................................................................21164.00643477331000000
..................................................................................................................TCCTGCTGCCCAAGTGCTTAT..................................................................................................................................21159.005912500141900000
......................................................................CTAAGTACTAGTGCCGCAGGAGG............................................................................................................................................................................23154.00541923433200000
..................................................................................................................TCCTGCTGCCCAAGTGCTT....................................................................................................................................19146.00460300192400000
........................................................................AAGTACTAGTGCCGCAGGA..............................................................................................................................................................................19144.0044041200100000
......................................................................CTAAGTACTAGTGCCGCAGT...............................................................................................................................................................................20141.00413190081100000
.......................................................................TAAGTACTAGTGCCGCAGGAGC............................................................................................................................................................................22141.0041233410100000
......................................................................CTAAGTACTAGTGCCGCA.................................................................................................................................................................................18139.00390181061110020
.......................................................................TAAGTACTAGTGCCGCAGGAGA............................................................................................................................................................................22139.0039038001000000
..................................................................................................................TCCTGCTGCCCAAGTGCTTATTA................................................................................................................................23139.0039026125500000
..........................................................................GTACTAGTGCCGCAGGAG.............................................................................................................................................................................18134.0034030101110000
.........................................................................AGTACTAGTGCCGCAGGAG.............................................................................................................................................................................19132.0032128011100000
......................................................................CTAAGTACTAGTGCCGCAGGTT.............................................................................................................................................................................22131.0031025100500000
...................................................................................................................CCTGCTGCCCAAGTGCTTATTA................................................................................................................................22130.0030016434300000
............................................................................................TTAGGTTCGTGTCCGCAATACCT......................................................................................................................................................23127.0027221261310000
........................................................................AAGTACTAGTGCCGCAGGAGT............................................................................................................................................................................21124.0024022200000000
..................................................................................................................TCCTGCTGCCCAAGTGCTTA...................................................................................................................................20124.0024120014700000
............................................................................................TTAGGTTCGTGTCCGCAATACC.......................................................................................................................................................22121.002137103430000
......................................................................CTAAGTACTAGTGCCGCAGGAAA............................................................................................................................................................................23120.0020017000120000
.....................................................................CCTAAGTACTAGTGCCGCAGGA..............................................................................................................................................................................22119.0019014500000000
......................................................................CTAAGTACTAGTGCCGCAGGAGTA...........................................................................................................................................................................24118.0018015110010000
......................................................................CTAAGTACTAGTGCCGCAGGCT.............................................................................................................................................................................22117.0017200141000000
.......................................................................TAAGTACTAGTGCCGCAGGAGTTT..........................................................................................................................................................................24116.0016013100110000
.......................................................................TAAGTACTAGTGCCGCAGGAA.............................................................................................................................................................................21116.0016015001000000
.........................................................................AGTACTAGTGCCGCAGGA..............................................................................................................................................................................18115.0015014100000000
.......................................................................TAAGTACTAGTGCCGCAGGT..............................................................................................................................................................................20114.0014014000000000
.......................................................................TAAGTACTAGTGCCGCAGGAC.............................................................................................................................................................................21114.001492200100000
......................................................................CTAAGTACTAGTGCCGCAGTT..............................................................................................................................................................................21112.0012110001000000
......................................................................CTAAGTACTAGTGCCGCAGGAGAA...........................................................................................................................................................................24112.001219110000000
.................................................................................................................CTCCTGCTGCCCAAGTGCTTATT.................................................................................................................................23111.001116200200000
............................................................................................TTAGGTTCGTGTCCGCAATAC........................................................................................................................................................21111.001102301410000
....................................................................................................................CTGCTGCCCAAGTGCTTATTA................................................................................................................................21111.001104061000000
........................................................................AAGTACTAGTGCCGCAGG...............................................................................................................................................................................18110.001009001000000
....................................................................................................................CTGCTGCCCAAGTGCTTATT.................................................................................................................................2019.00902202300000
...................................................................................................................CCTGCTGCCCAAGTGCTTAT..................................................................................................................................2018.00805002100000
......................................................................CTAAGTACTAGTGCCGCAGGAGTC...........................................................................................................................................................................2418.00802500100000
.......................................................................TAAGTACTAGTGCCGCAGGAGG............................................................................................................................................................................2218.00825100000000
......................................................................CTAAGTACTAGTGCCGCAGGGC.............................................................................................................................................................................2217.00700310300000
.............................................................................................TAGGTTCGTGTCCGCAATACC.......................................................................................................................................................2117.00702300020000
.......................................................................TAAGTACTAGTGCCGCAG................................................................................................................................................................................1817.00706001000000
droEre2
T--------------------------------------------------------------CGCTTTCCTAAGTACTAGTGCCGCAGGAGTTAGGTTCGTGTCCGCAATACCTCCTGCTGCCCAAGTGCTTATTAAAGCGGCGAGTTGCCCAGC----------AAAA------GAATAC-----AAA--------G-------------------------------------------TGCTC------AGTGCTTC----SizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
......................................................................CTAAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................221346695.003466959293315563639122772170819176169
......................................................................CTAAGTACTAGTGCCGCAGGA..............................................................................................................................................................................21158131.00581312574831425262262187271300
......................................................................CTAAGTACTAGTGCCGCAGGAGT............................................................................................................................................................................23124541.002454162191778281854841663711
.......................................................................TAAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................21111341.0011341648576223358036140
......................................................................CTAAGTACTAGTGCCGCAGG...............................................................................................................................................................................2015724.005724301834339923720870
.......................................................................TAAGTACTAGTGCCGCAGGAGT............................................................................................................................................................................2213798.0037981225341173312822610
......................................................................CTAAGTACTAGTGCCGCAGGAGTT...........................................................................................................................................................................2412218.002218288840156018043
.......................................................................TAAGTACTAGTGCCGCAGGA..............................................................................................................................................................................2012145.00214518134262372630
......................................................................CTAAGTACTAGTGCCGCAGGAGA............................................................................................................................................................................2312015.0020159271136172310010
......................................................................CTAAGTACTAGTGCCGCAGGAA.............................................................................................................................................................................2211424.0014245867851397060
......................................................................CTAAGTACTAGTGCCGCAGGAT.............................................................................................................................................................................2211407.00140739828012129021
......................................................................CTAAGTACTAGTGCCGCAGGAGTTT..........................................................................................................................................................................251798.0079868060187060
......................................................................CTAAGTACTAGTGCCGCAGGT..............................................................................................................................................................................211713.007133612581232680
.......................................................................TAAGTACTAGTGCCGCAGGAGTT...........................................................................................................................................................................231515.005158821310273750
..................................................................................................................TCCTGCTGCCCAAGTGCTTATT.................................................................................................................................221504.00504218234862360
......................................................................CTAAGTACTAGTGCCGCAGGAGC............................................................................................................................................................................231443.00443483219473330
........................................................................AAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................201395.003953214803590
......................................................................CTAAGTACTAGTGCCGCAGGAC.............................................................................................................................................................................221362.00362647936381720
......................................................................CTAAGTACTAGTGCCGCAG................................................................................................................................................................................191291.00291159218213970
......................................................................CTAAGTACTAGTGCCGCAGGG..............................................................................................................................................................................211266.002662094503450
...................................................................................................................CCTGCTGCCCAAGTGCTTATTA................................................................................................................................221235.0023519214741890
......................................................................CTAAGTACTAGTGCCGCA.................................................................................................................................................................................181228.002282312051970
.......................................................................TAAGTACTAGTGCCGCAGG...............................................................................................................................................................................191215.002151890303200
......................................................................CTAAGTACTAGTGCCGCAGGAGG............................................................................................................................................................................231207.002076601101390
..................................................................................................................TCCTGCTGCCCAAGTGCTTAT..................................................................................................................................211164.0016430012071150
.....................................................................CCTAAGTACTAGTGCCGCAGGAG.............................................................................................................................................................................231156.001561101611370
......................................................................CTAAGTACTAGTGCCGCAGGAGTAT..........................................................................................................................................................................251156.00156602051430
.......................................................................TAAGTACTAGTGCCGCAGGAGTTT..........................................................................................................................................................................241142.001422500171090
......................................................................CTAAGTACTAGTGCCGCAGAG..............................................................................................................................................................................211137.00137570204740
...................................................................................................................CCTGCTGCCCAAGTGCTTATT.................................................................................................................................211132.00132371819760
.......................................................................TAAGTACTAGTGCCGCAGGAT.............................................................................................................................................................................211111.00111940000170
..................................................................................................................TCCTGCTGCCCAAGTGCTTATTA................................................................................................................................23198.0098320632550
.........................................................................AGTACTAGTGCCGCAGGAG.............................................................................................................................................................................19188.0088490202350
........................................................................AAGTACTAGTGCCGCAGGA..............................................................................................................................................................................19178.007871000160
......................................................................CTAAGTACTAGTGCCGCAGGC..............................................................................................................................................................................21175.0075403411350
......................................................................CTAAGTACTAGTGCCGCAGGAAA............................................................................................................................................................................23175.0075400201320
......................................................................CTAAGTACTAGTGCCGCAGGAGAA...........................................................................................................................................................................24172.0072190001520
........................................................................AAGTACTAGTGCCGCAGGAGT............................................................................................................................................................................21171.0071580100120
.......................................................................TAAGTACTAGTGCCGCAGGAGA............................................................................................................................................................................22167.0067500012140
.......................................................................TAAGTACTAGTGCCGCAGGAA.............................................................................................................................................................................21165.0065470101160
......................................................................CTAAGTACTAGTGCCGCAGGAGTTA..........................................................................................................................................................................25164.006450100580
......................................................................CTAAGTACTAGTGCCGCAGT...............................................................................................................................................................................20163.0063250705260
..................................................................................................................TCCTGCTGCCCAAGTGCTT....................................................................................................................................19153.005350201450
......................................................................CTAAGTACTAGTGCCGCAGGTT.............................................................................................................................................................................22151.005140050150
..................................................................................................................TCCTGCTGCCCAAGTGCTTA...................................................................................................................................20146.004660503320
..........................................................................GTACTAGTGCCGCAGGAG.............................................................................................................................................................................18142.0042220211160
............................................................................................TTAGGTTCGTGTCCGCAATACC.......................................................................................................................................................22141.0041941111150
......................................................................CTAAGTACTAGTGCCGCAGGAGTTTT.........................................................................................................................................................................26141.0041120002270
....................................................................................................................CTGCTGCCCAAGTGCTTATT.................................................................................................................................20139.003991401240
............................................................................................TTAGGTTCGTGTCCGCAATACCT......................................................................................................................................................23138.0038643312100
.....................................................................CCTAAGTACTAGTGCCGCAGGA..............................................................................................................................................................................22136.003628400040
......................................................................CTAAGTACTAGTGCCGCAGGAGTGT..........................................................................................................................................................................25135.003510302290
......................................................................CTAAGTACTAGTGCCGCAGGAGTA...........................................................................................................................................................................24134.0034140302150
......................................................................CTAAGTACTAGTGCCGCAGGAGTG...........................................................................................................................................................................24131.003140505170
....................................................................................................................CTGCTGCCCAAGTGCTTATTA................................................................................................................................21130.003040103220
............................................................................................TTAGGTTCGTGTCCGCAATAC........................................................................................................................................................21126.002610107170
.......................................................................TAAGTACTAGTGCCGCAGGT..............................................................................................................................................................................20124.002422000020
......................................................................CTAAGTACTAGTGCCGCAGGAGTTAA.........................................................................................................................................................................26123.002310002200
......................................................................CTAAGTACTAGTGCCGCAGA...............................................................................................................................................................................20122.002216000060
......................................................................CTAAGTACTAGTGCCGCAGGAGTAG..........................................................................................................................................................................25119.001920000170
.......................................................................TAAGTACTAGTGCCGCAGGAGTTA..........................................................................................................................................................................24118.001830000150
.......................................................................TAAGTACTAGTGCCGCAGGAGC............................................................................................................................................................................22118.00184500090
.......................................................................TAAGTACTAGTGCCGCAGGAC.............................................................................................................................................................................21117.001713100030
...................................................................................................................CCTGCTGCCCAAGTGCTTAT..................................................................................................................................20117.00174030370
......................................................................CTAAGTACTAGTGCCGCAGTT..............................................................................................................................................................................21116.001616000000
.................................................................................................................CTCCTGCTGCCCAAGTGCTTATT.................................................................................................................................23116.00166301060
......................................................................CTAAGTACTAGTGCCGCAGGATA............................................................................................................................................................................23115.001550000100
......................................................................CTAAGTACTAGTGCCGCAGGAGTTG..........................................................................................................................................................................25115.001500004110

Generated: 10/20/2015 at 07:00 PM