ID:

dmo_1952

 Coordinate:

scaffold_6540:15372107-15372257 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-8.4 -8.1 -7.9 -7.8

Flybase annnotation

CDS [Dmoj\GI22947-cds]; exon [dmoj_GLEANR_8121:6]; intron [Dmoj\GI22947-in]

Repeatable elements

NameClassFamilyStrand
DNAREP1_DMRCHelitron-
Homo6DNAhAT-Pegasus-
mature
  1. scaffold_249:483-506 +
  2. scaffold_252:152-175 +
  3. scaffold_4506:46039-46062 +
  4. scaffold_6308:1932547-1932570 +
  5. scaffold_6383:1094-1117 +
  6. scaffold_6447:81483-81506 +
  7. scaffold_6473:1268686-1268709 +
  8. scaffold_6496:5272411-5272434 +
  9. scaffold_6496:25501853-25501876 +
  10. scaffold_6498:1808704-1808727 +
  11. scaffold_6500:9151789-9151812 +
  12. scaffold_6500:14074970-14074993 +
  13. scaffold_6500:22292138-22292161 +
  14. scaffold_6500:27157752-27157775 +
  15. scaffold_6540:8076075-8076098 +
  16. scaffold_6540:11189014-11189037 +
  17. scaffold_6540:12119749-12119772 +
  18. scaffold_6680:12650018-12650041 +
  19. scaffold_6680:16371613-16371636 +
  20. scaffold_6680:22129506-22129529 +
  21. scaffold_1617:12373-12396 +
  22. scaffold_1728:251-274 +
  23. scaffold_2643:657-680 +
  24. scaffold_4384:1607-1630 +
  25. scaffold_4536:4270-4293 +
  26. scaffold_5093:834-857 +
  27. scaffold_6406:89117-89140 +
  28. scaffold_6441:94605-94628 +
  29. scaffold_6482:1348803-1348826 +
  30. scaffold_6482:2189303-2189326 +
  31. scaffold_6498:836557-836580 +
  32. scaffold_6500:13686325-13686348 +
  33. scaffold_6500:28018729-28018752 +
  34. scaffold_6500:31024880-31024903 +
  35. scaffold_6540:232230-232253 +
  36. scaffold_6540:24001357-24001380 +
  37. scaffold_6540:24006136-24006159 +
  38. scaffold_6540:25159706-25159729 +
  39. scaffold_6541:1438675-1438698 +
  40. scaffold_6693:3467-3490 +
  41. scaffold_527:148-171 +
  42. scaffold_1790:835-858 +
  43. dmo_354  scaffold_3030:620-643 +
  44. scaffold_3755:93-116 +
  45. scaffold_4423:8357-8380 +
  46. scaffold_4423:12881-12904 +
  47. scaffold_5732:5471-5494 +
  48. scaffold_6366:1428-1451 +
  49. scaffold_6474:45224-45247 +
  50. scaffold_6482:1388589-1388612 +
  51. scaffold_6482:2022029-2022052 +
  52. scaffold_6500:27788345-27788368 +
  53. scaffold_6500:29497518-29497541 +
  54. scaffold_6500:30246450-30246473 +
  55. scaffold_6500:30830648-30830671 +
  56. scaffold_6501:82701-82724 +
  57. scaffold_6540:1154232-1154255 +
  58. scaffold_6541:1139420-1139443 +
  59. scaffold_6659:1684-1707 +
  60. scaffold_6680:22118177-22118200 +
  61. scaffold_41:87-110 -
  62. scaffold_3062:6285-6308 -
  63. scaffold_4719:3472-3495 -
  64. scaffold_4904:1172-1195 -
  65. scaffold_6308:1665321-1665344 -
  66. scaffold_6314:10155-10178 -
  67. scaffold_6359:3461992-3462015 -
  68. scaffold_6473:10047915-10047938 -
  69. dmo_851  scaffold_6482:1498408-1498431 -
  70. scaffold_6482:2646384-2646407 -
  71. scaffold_6496:26021016-26021039 -
  72. scaffold_6496:26023602-26023625 -
  73. scaffold_6498:1294912-1294935 -
  74. scaffold_6500:31006220-31006243 -
  75. scaffold_6540:748620-748643 -
  76. dmo_1952  scaffold_6540:15372186-15372209 -
  77. scaffold_6540:29955826-29955849 -
  78. scaffold_6541:799608-799631 -
  79. scaffold_6680:23607890-23607913 -
  80. scaffold_6682:5456-5479 -
  81. scaffold_2270:2190-2213 +
  82. scaffold_3104:3908-3931 +
  83. scaffold_3885:1671-1694 +
  84. scaffold_4151:731-754 +
  85. scaffold_4873:267-290 +
  86. scaffold_6259:7481-7504 +
  87. scaffold_6262:22745-22768 +
  88. scaffold_6359:995671-995694 +
  89. scaffold_6374:2584-2607 +
  90. scaffold_6482:1099511-1099534 +
  91. scaffold_6482:2263508-2263531 +
  92. scaffold_6496:25295050-25295073 +
  93. scaffold_6498:2739818-2739841 +
  94. scaffold_6500:11647283-11647306 +
  95. scaffold_6500:14285362-14285385 +
  96. scaffold_6500:30017562-30017585 +
  97. scaffold_6500:32139451-32139474 +
  98. scaffold_6540:2009500-2009523 +
  99. scaffold_6541:2233574-2233597 +
  100. scaffold_6681:72032-72055 +
star
  1. scaffold_4719:3433-3452 -
  2. scaffold_6308:1224610-1224629 -
  3. scaffold_6308:1665282-1665301 -
  4. scaffold_6473:2711125-2711144 -
  5. scaffold_6473:11166302-11166321 -
  6. scaffold_6473:16305086-16305105 -
  7. scaffold_6473:16544993-16545012 -
  8. scaffold_6496:16842583-16842602 -
  9. scaffold_6496:24029259-24029278 -
  10. scaffold_6496:25785845-25785864 -
  11. scaffold_6500:3680065-3680084 -
  12. scaffold_6500:6500433-6500452 -
  13. scaffold_6500:6514803-6514822 -
  14. scaffold_6500:24070098-24070117 -
  15. scaffold_6500:29316300-29316319 -
  16. dmo_1952  scaffold_6540:15372147-15372166 -
  17. scaffold_6540:16001898-16001917 -
  18. scaffold_6540:33186875-33186894 -
  19. scaffold_6680:1738905-1738924 -
  20. scaffold_6680:22904051-22904070 -

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GAGTGCAAGAAGCCGTTCTCGCGCAAGGATAATCTCAACAAGCATAAGCGGTGAGTACATTCAGTCCTTAACTTATTATACCCTGAACCCATTGAAAATGGGAAATCAGGGTATAATGGTTTTGTGAAAAAGTATGTAACGGGCAGAAGGAGGCGTGGCAGACCCCACAAAGTATATATATTCTTGATCAGCGCGATGAGCTGAGTCGATATAGCCCTGTCCGTCTGTCCGTCCGTCCGTCCGTCCGTATG
**************************************************************************************************.......................((((..............((.((........)).))))))****************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M060
embryo
 M046
female body
 V110
male body
..................................................................................................TGGGAAATCAGGGTATAATGGTTT................................................................................................................................. 24 0 20 2.30 46 46 0 0
..............GTTCCTGCGCAAGGTTAATC......................................................................................................................................................................................................................... 20 3 8 0.38 3 0 3 0
.............................................................................................................................................GGCAGAAGGAGGCGTGGCAG.......................................................................................... 20 0 20 0.30 6 0 6 0
.............................................................................................................................................................................................................................CGTCTGTCCGTCCGTCCGTCC......... 21 0 20 0.15 3 0 0 3
........................................................................................................................................TAACGGGCAGAAGGAGGCGTGG............................................................................................. 22 0 20 0.10 2 0 2 0
..................................................................................................................................................................................TATTCTTGATCAGCGCGATGG.................................................... 21 1 20 0.05 1 0 1 0
...................................................................................................................ATGGTTTTGTGAAAAAGTATGT.................................................................................................................. 22 0 20 0.05 1 0 1 0
................................................................................................................................................................................................................................CTGTCCGTCCGTCCGTCCGTCC..... 22 0 20 0.05 1 0 1 0
......................................................................................................................................TGTAACGGGCAGAAGGAGGC................................................................................................. 20 0 20 0.05 1 0 0 1
.............................................................................................GAAAATGGGAAATCAGGGTATAAT...................................................................................................................................... 24 0 20 0.05 1 0 1 0

Anti-sense strand reads

CTCACGTTCTTCGGCAAGAGCGCGTTCCTATTAGAGTTGTTCGTATTCGCCACTCATGTAAGTCAGGAATTGAATAATATGGGACTTGGGTAACTTTTACCCTTTAGTCCCATATTACCAAAACACTTTTTCATACATTGCCCGTCTTCCTCCGCACCGTCTGGGGTGTTTCATATATATAAGAACTAGTCGCGCTACTCGACTCAGCTATATCGGGACAGGCAGACAGGCAGGCAGGCAGGCAGGCATAC
******************************************************************************************.......................((((..............((.((........)).))))))************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 M060
embryo
............................................................................................................................................................................................................CAGCTATATCGGGACAGGCAGACAG...................... 25 0 20 0.35 7 0 7 0
.........................................................................................................AGTCCCATATTACCAAAACAC............................................................................................................................. 21 0 20 0.20 4 4 0 0
...............................................................................................................................................GTCTTCCTCCGCACCGTCTGGGGTGT.................................................................................. 26 0 20 0.15 3 3 0 0
........................................................................................................................................................CGCACCGTCTGGGGTGTTTCAT............................................................................. 22 0 20 0.10 2 2 0 0
.....................................................................................................................................................................................................................CGGGACAGGCAGACAGGCAGGCAGGC............ 26 0 20 0.05 1 0 0 1
...............................................................................................................................................................................................GCGCTACTCGACTCAGCTATAT...................................... 22 0 20 0.05 1 1 0 0
.....................................................................................................CTTTAGTCCCATATTACCAAAACAC............................................................................................................................. 25 0 20 0.05 1 0 0 1
..............................................................................................................................................................................................CGCGCTACTCGACTCAGCT.......................................... 19 0 20 0.05 1 1 0 0
.......................................................................................................................................................................................................................GGACAGGCAGACAGGCAGGCAGGCAGG......... 27 0 20 0.05 1 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6540:15372057-15372307 - dmo_1952 GAGT--GCAAGA-----AGCCGT---TC--TC-----GCGCAAGGATAA---------------------TCTCAACAAGCAT-----------------------------------------------------AAG------------------------C---GGTGA---------------G----T-----ACATTCA----------------G-------T----------CC-----TTAACTTATTATACCCTGAACCCATTGAAAAT----GGGAAATCAGGGTATAATGGTTTTGTGAAAAA-------GTATGTAACGGGCAGAAGGAGGCGTGGCAGACCCCACAAAGTATATATATTCTTGATCAG----------------------CGCGATGAGCTGAGTCGATATAGCCCTGTCCGTCTGTCCGTCCGTCC----G----TCCGTCC----------------GTATG
droVir3 scaffold_13047:4793952-4794181 - GCAC--A-----------------------------------AAGATAA---------------------AGT-----------------T--------------T---------------C-ATACATGATTTATTAC------------------------C---AGTAA---------------T----T-----ATATT-------------------------------------CT-----G-TGCTTATTATACCCTGAACCCATTAAAAAT----GGGT-ATAAGGGTATATTTTATTTGTGCAAAA----TATGTATGTAACAGGCAGAAGGAAGCATTTCCGACCCCATAAAGTATATATATTCTTGATCAG----------------------CATCAATAGCCGAGTCGATCTAGCCATGTCCGTCTGTCTGTCCGTC------------CGTAT----------------GTATG
droGri2 scaffold_14906:7065252-7065461 - TAAG--C-------------AGT-------------------TGAATAAATTTAT-----------------------------------------------------------------------------------------------------------------------------------TT---------------------T----------ACAAT---------------TT-----T-TGTTTTTTATACCCTGAACCCATTGAAAAT----GGGTAAAAAGGGTATAATGGCTTTGTGCAAAT-------GTATGCAACAGGCTGAAGGAAGCATCTCCGACCCCATAAAGTATATATATTCTTGATCAG----------------------GGTCAACAGTCGAGTCGATATAGCCATGTTCCTCTGTCCGTCCGTC------------TGTCT----------------GTATG
droWil2 scf2_1100000002031:852-1080 + CAAG--A----------ATCAAC---TC--TT-G----------TTAAA---------------------AAAGAAAA----GAAACAAAGAAAAGTAG-------------------------------------AAG--------CTA-----------------------------------------------------------------AA--------------------------------AATTTTTTATACCATACACCCAT----------AGGGT-GAAATGGTATATTAAAGTCGCCAAAAT-------GTATGTAACAGGCAGAAGGAAGCATCTCCGACCCCACAAAGTATATATATTCTTGATCAG----------------------GATCAAAAACCGAGTCGATCTAGCCATGTCCGTCTGTCCGTCCGTCC----G----TCCGTCC----------------GTATG
dp5 Unknown_singleton_2278:5749-5991 + GTAC--TT--G-AGCAC---------------TG---------------------------------------------------------------------------------------------------------A--------TGTCATAAAAGGCACAAACAT-------T--------TTT---------------------T----------ACAATGCTCT----------TG-----GCACATTTTTATACCCGATACTCAA----AAT----GAGT-ATTGGGGTATATTAGATTTGTGGTAAAAGTGGATGTGTGTAACGTCCAGAAGGAATCGTTTCCGACCCCATAAAGTATATATATTCTTGATCAG----------------------CATCAATAGCCGAGTCGATTGAGCCCTGTCTGTCTGTCCGTCCGTCC----G----TCTGTCCGTCC------------CTATC
droPer2 scaffold_79:115025-115267 - GTAC--TT--G-AGCAC---------------TG---------------------------------------------------------------------------------------------------------A--------TGTCATAAAAGGCACAAACAT-------T--------TTT---------------------T----------ACAATGCTCT----------TG-----GCACATTTTTATACCCGATACTCAA----AAT----GAGT-ATTGGGGTATATTAGATTTGTGGTAAAAGTGGATGTGTGTAACGTCCAGAAGGAATCGTTTCCGACCCCATAAAGTATATATATTCTTGATCAG----------------------CATCAATAGCCGAGTCGATTGAGCCCTGTCTGTCTGTCCGTCCGTCC----G----TCTGTCCGTCC------------CTATC
droAna3 scaffold_13165:262439-262680 + GAAA--T-------------CGT---CT--TA-----TTGCAAGTTTAA---------------------ACTGAACA----GAAAGGCCT---------------------------------------------TAATTCTACATCTA-----------------------------------------------------------------TTA--ATT-------TTTTA--TT-TT-----ATTTATTTTTATACCCTT-----GC----------A-------GAGGGTATTATAATTTTGGTCAAAA-------GTGTGCAACGCAGTGAAGGAGACATCTCCGACCCTATAAAGTATATATATTCTTGATCAG----------------------GATCACCTCCTGAGTCGATATAAGCATGTCCGTCTGTCCGTCTGTCC----G----TCGGTCCGTCTGT----------CCGTC
droBip1 scf7180000393798:6635-6861 - GAAG--C-------------CA----------TGCTGACATAAAGA----A--A-TG--------------ATCGAAGAGCAAAAGTGCTGCAAATTAC-------------------------------------GA-----------------------------------------------------------------------------------G-------------------------T-TAGTAATTATACCCTT-----GC----------A-------GAGGGTATTATAATTTTGTCCAAAA-------GTGTGCAACGCAGTGAAGGAGACATCTCCGACCCTATAAAGTATATATATTCTTGATCAG----------------------GATCACCTCCTGAGTTGATATGAGCATGTCCGTCTGTCCGTCTGTCC----G----TCTGTCCGTCTGT----------CTATC
droKik1 scf7180000302334:861893-862117 + GTGC--TA--G--------------------------------------AA--A-CAGTTG--------------------------------------GGAATTCTAAGAA-----A------------------AAG--------CTA------------GC---GGAAA---------------G----T-----ACTTTTTGTGA-ACCTTTA--------------------------------TTATTTTTATACCCTT------------------------GCAGGGTATTATAATTTCAGTCAGAA-------GTTTGCAACGCAGTGAAGGAGACGTTTCCGACCCTATAAAGTATATATATTCTTGATCAG----------------------CATCAACAGCCGAGTCGATCTAGCCATGTCCGTCTGTCCGTCTGTCC----G----TCTGTCC----------------GTCTG
droFic1 scf7180000454146:30201-30411 + GCAG--G-------------------------------------GATAATTTGAT-TTCA----------------------------------------------------------------CACA-------TTG-A--------CGTC------------------AA---------------T----GC--GTAC-------------------------------------------------ATTTTATTATACCCTT-----GC----------AGAGC-AAAAGGGTATTATAATTTCAGTCAGAA-------GTTTGCAACGCAGTGAAGGAGACACCTCAGACCCCATAAAGTATATATATTCTTGATCAG----------------------AATCACGAGCAGAATCGAAATATGTATGTACGTCTGTCCGTCTGTCC----G----TCTGTCC----------------GTCTG
droEle1 scf7180000487991:1613-1825 - CTCC--CA--T-A-------------------------------G----GA--A-CAATCG--------------------------------------AAAAAAA------------------------------------------------------TAAAAAAAA-------T--------TAT---------------------A----------GCTTTGCTGT----------TT-----T-TAATTTTTATACCCTT-----GC----------A-------GAGGGTATTATAATTTCAGTCAGAA-------GTTTGCAACGCAGTGAAGGAGACGTTTCCGACCCTATAAAGTATATATATTCTTGATCAG----------------------CATCACTAGTAGAGTCGATCTAGCCATGTCCGTCTGTCCGTCCGTCT----G----TCCGTCT----------------GT---
droRho1 scf7180000778506:4528-4774 - TAGT--TA--T-A-------------------------------G----GA--A-CTATTGCAAGAGCTCTCTCACCAAG---------------------------------------CTCT-------------TAAGGG---------------------G---GGGTA---------------T------------------------T--GTA--TTT-------TTTTT--TT-CT-----TTGCATTTTTATACCCGTTACTCGT----------AGAGT-AAAAGGGTATATTGTATTCGTGCAAAA-------GTATGTAACAGGTAGAAGGAAGCGTTTCCGACCCTATAAAGTATATATATTCTTGTTCAG----------------------GATTACTAGCCGAGTCGATCTAGCCATGTCCGTCTGTCCGTCTGTCT----G----TCTGTCC----------------GTATT
droBia1 scf7180000302193:2000419-2000629 - AGGG--G---------------------------------------TAA---------------------TTGCAATATTTGA-----------------------------------------------------AAG-----------TT------------------AA---------------G----AT--GTAT----------A------TTA-T-------T--------C-CT-----C-TACATCTTTTACCCGTTACTCGT----------AGAGC-AAAAGGGTATACCGGATTTGTCAGAAA-------GTATGTAACAGGTAAAAAGAAGCGTTTCCGATCCCATAAAGTATATATATTCTTGATCAG----------------------GATCACTAGCCGAG---------CCATGTCCGTCTATCCGTCTGTCC----G----TCCGTCC----------------GTATG
droTak1 scf7180000414005:967-1215 - AGGG--C-AAGA-----T---------TTTG-CG------CTAATATAA---------------------AATCA----------GTGA----------AAAGGTA-----------------------------TGGG------------------------C---GGGAA---------------T----T-----A----------------------G-------T-----------G-----T-TACTTTTTATACCCGTTACTCGT----------AGAGT-AAAAGGGTATACTAGATTCGTGCAAAA-------GTATGTAACAGCTAGAAGGAAGCGTTTCCGACCCCATAAAGTATATATATTCTTGATCAG----------------------GGTCACTAGCCGAGTCGATCTAGCCATGTCCGTCTGTCCGTCTGTCC----G----TCTGTCCGTCTGTCTGTCTGTCTGTATG
droEug1 scf7180000408987:357055-357313 - GAGG--ATAAGT-----AGCCTGCTGAT--TT-----GTGGATGGATAAGCTGAT-CT-------------------TAGTAC-----------------------------------------------------AAG--------ATG-------------------TGA--------------------------------------A------TTG-G-------CC-TAACCATTGC-----C-CACTTTTTATATCCGTCACTCAT----------GGAGT-AAAAGGGTATACTAGATTCGTTAAAAA-------GTATGTAAAAGGTAGAAGGAAGCGTTTCCGACCCTATAAAGTACATATATACTTGATCAG----------------------TATTAATAGCGAAGTCGATTAGGCCATGTCCGTCTGTCCGTCCGAACGTCCGTCCGTCTGTCC----------------GTATG
dm3 chrX:22239799-22240013 + ACGA--G-------------------------------------TATAAGCCGAG-TACAGCAAGCGAC------------------------------------CT-----ACCAAAGATTT-------------------------------------------------------------------------------------------TAA----G-------------------T-----T-CAATTAA--------------------AATAGTTGGGT-AAAGGTGTATACTAGATTCGTTCAAAA-----ATGTATGTAACA----GAAGGAAGCGTTTCCGACCCTATAAATTATATATATTCTTGATCAG----------------------GATCAATAGCCGAGTCGATCTACCCATATCCGTCGGCCGGTCTGTCT----GTCCTTCATTCC----------------GTATG
droSim2 2r:950096-950310 + AATC--TG--G-A---------------------------------T------------------------------AAGAAG-----------------------------------------------------AAG--------ATG------------------GCGA---------------T------------------------GGTAC----T-------------------TTCTCTTCACTTCAATATACCCGTTACTCGT----------AGAGT-AAAAGGGTATACGACATTCGTTGAAAA-------GTATGTAACACGCAGAAAAAATCGTTTCCGACTATAAAAAGAATATATATTCTTGATCAG----------------------GATCAATAGGCGAATCGGTGTAGACATGTCTGTCAGTCCCACTGTCC----G----TCTGTCC----------------GTACG
droSec2 scaffold_18:1200213-1200417 - TCAA--A----------------------------------------------------------------------AAGTAC-----------------------------------------------------TAG------------------------C---TGTAA--------------------------------------ACGTTTA----C-------------------T-----T-CTGTTATTATACCCTTTACTCGT----------AGAGT-AAACGGGTATACTAGATTCGTCGAAAA-------GTATGTAACAGGAAGAAGGATGAGTTTCCGACTATATGAAGAATATAAATTCTTGATCAA----------------------GATCAATAGCGGAGTCGAACTGAACATGTACCCCTGTCCGTATCCGA----A----TCCGTCC----------------GTATA
droYak3 v2_chr2h_random_004:795911-796142 + ACCTACA-----------------------------------AAGTTA-----------------------------------------------------------------------------------------AC------------------------C---AGTCCTCGTTTGTTTCGT-TTTGAGATGCGT------------A------T----------------GCCATTCA-----T-TTCTTTTTATACCCGTTACTCGT----------AGAGT-AAAAGGGTATACTAGATTCGTTGAAAA-------GTATGTAACAGGCAGAAGGAAGCGTTTCCGACCATATAAAGTATATATATTCTTGATCAG----------------------GATCAGTAGCCGAGTCGATCTGGCCATGTCCGTCTGTCCGTCCGTCT----G----TCCGTCC----------------GTATG
droEre2 scaffold_4784:7342644-7342891 - AGAC--G------------CAGT---TA--GT-G-------------------------------------CTCAAAGAAAATTAATAA----------------------------------------------------------------TAATAACTACAAATAA-------G--------TAA---------------------T----------GAAATGCATT----------TT-----GAACATTTTTATACCCGTTACTCGT----------AGGGT-AAAAGGGTATACTAGATTCGTTGAAAA-------AATTGTAACAGGTAGAAGGAAGCGTTTCTGACCATATAAAGTATATATATTATTGATATATTATTGATAATTGATATATATTATTGAATAGCCGAGTCGAACTGGCCATGTCCGTCTGTCCG----------------------------------------TATG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
GAGT--GCAAGA-----AGCCGT---TC--TC-----GCGCAAGGATAA---------------------TCTCAACAAGCAT-----------------------------------------------------AAG------------------------C---GGTGA---------------G----T-----ACATTCA----------------G-------T----------CC-----TTAACTTATTATACCCTGAACCCATTGAAAAT----GGGAAATCAGGGTATAATGGTTTTGTGAAAAA-------GTATGTAACGGGCAGAAGGAGGCGTGGCAGACCCCACAAAGTATATATATTCTTGATCAG----------------------CGCGATGAGCTGAGTCGATATAGCCCTGTCCGTCTGTCCGTCCGTCC----G----TCCGTCC----------------GTATGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................................................................................................................................................................................................................................................................................T----GGGAAATCAGGGTATAATGGTTT......................................................................................................................................................................................24202.30460000460
............................................................................................................................................................................................................................................................................................................................................GGCAGAAGGAGGCGTGGCAG........................................................................................................................................20200.306600000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCTGTCCGTCCGTCC----G----TCC.........................21200.153000003
.......................................................................................................................................................................................................................................................................................................................................TAACGGGCAGAAGGAGGCGTGG...........................................................................................................................................22200.102200000
.................................................................................................................................................................................................................................................................................................................................................................................TATTCTTGATCAG----------------------CGCGATGG............................................................................21200.051100000
...........................................................................................................................................................................................................................................................................................................ATGGTTTTGTGAAAAA-------GTATGT................................................................................................................................................................22200.051100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTCCGTCCGTCC----G----TCCGTCC----------------.....22200.051100000
.....................................................................................................................................................................................................................................................................................................................................TGTAACGGGCAGAAGGAGGC...............................................................................................................................................20200.051000001
.................................................................................................................................................................................................................................................................................GAAAAT----GGGAAATCAGGGTATAAT...........................................................................................................................................................................................24200.051100000
droVir3
GCAC--A-----------------------------------AAGATAA---------------------AGT-----------------T--------------T---------------C-ATACATGATTTATTAC------------------------C---AGTAA---------------T----T-----ATATT-------------------------------------CT-----G-TGCTTATTATACCCTGAACCCATTAAAAAT----GGGT-ATAAGGGTATATTTTATTTGTGCAAAA----TATGTATGTAACAGGCAGAAGGAAGCATTTCCGACCCCATAAAGTATATATATTCTTGATCAG----------------------CATCAATAGCCGAGTCGATCTAGCCATGTCCGTCTGTCTGTCCGTC------------CGTAT----------------GTATGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............................................................................................................................................................................................................................................................................TTAAAAAT----GGGT-ATAAGGGTATATTT..........................................................................................................................................................................................26110.9110000000001000100000000000221000001010010000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAGGAAGCATT............................................................................................................................................25200.357000000000000000000000000010050000010000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................GTATGTAACAGGCAGAAGGAAGCATT............................................................................................................................................26200.306000000002000000000000000040000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAG----------------------CATCAATAGC..........................................................................24200.204000004000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGATCTAGCCATGTCCGTCTGT...............................................24200.204000000000000000000000000000040000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................CTTGATCAG----------------------CATCAATAGCCGAG......................................................................23200.153000000000000000000000000000000030000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAGGAAGCATTT...........................................................................................................................................26200.153000000000000000000000000010001000000000000000000000000000000001
...............................................................................................................................................................................................................................................................................TTAAAAAT----GGGT-ATAAGGGTATATTTT.........................................................................................................................................................................................2790.111000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................TATATTCTTGATCAG----------------------CATCAATAG...........................................................................24200.102000000000000000000002000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................TTGATCAG----------------------CATCAATAGCCGA.......................................................................21200.102000000000000000000000000000000000000000200000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................GCCGAGTCGATCTAGCCATGTCCG....................................................24200.102000000000000000000000000000000020000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................TCAATAGCCGAGTCGATCTAGCCATG........................................................26200.102000000000000000000000000000000000020000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................TGTATGTAACAGGCAGAAGGAAGCATTT...........................................................................................................................................28200.102000000000000000000000000000000000000000000000000000000000000002
.......................................................................................................................................................................................................................................................................................................................................................................AAAGTATATATATTCTTGA..............................................................................................................19200.102000000000000000000000000000000000000000200000000000000000000000
......................................................................................................................................................................................................................................................................................T----GGGT-ATAAGGGTATATTTTATTTG....................................................................................................................................................................................25170.061000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................ATGTATGTAACAGGCAGAAGGAAGCATT............................................................................................................................................28200.051000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................TTAAAAAT----GGGT-ATAAGGG.................................................................................................................................................................................................19200.051000000000000000000000000000010000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAG----------------------CATCAATAGCCGA.......................................................................27200.051000000000000000000000000010000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................GTATGTAACAGGCAGAAGGAAGCATTT...........................................................................................................................................27200.051000000001000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAGGAAGCA..............................................................................................................................................23200.051000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................TTAAAAAT----GGGT-ATAAGGGTATATTTC.........................................................................................................................................................................................27200.051000000000000100000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................GTAACAGGCAGAAGGAAGCATTTCCGA.......................................................................................................................................27200.051000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................ATAAGGGTATATTTTATTTGTGC.................................................................................................................................................................................23200.051000000000000000000000000000000001000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................AAGCATTTCCGACCCCATAAAGT............................................................................................................................23200.051000000000000000000100000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................TATTCTTGATCAG----------------------CATCAATAGCC.........................................................................24200.051000000000000000000000000000100000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................TGTAACAGGCAGAAGGAAGCATTTCC.........................................................................................................................................26200.051000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................................................................TGAACCCATTAAAAAT----GGGT-ATAAGGG.................................................................................................................................................................................................27200.051000000000000000000000000000010000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTCTGTCCGTC------------CGTAT----------------GTA..21200.051000000000000000000000000000000000000001000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................TGTAACAGGCAGAAGGAAGC...............................................................................................................................................20200.051000000000000000000000000000000000000000000000000000000000000001
.......................................................................................................................................................................................................................................................................................................................................TAACAGGCAGAAGGAAGCATT............................................................................................................................................21200.051000000000000000000000000000000000100000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................ATGTAACAGGCAGAAGGAAGCATT............................................................................................................................................24200.051000000000000000000000000001000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGATCTAGCCATGTCCGTCTGTCTG............................................27200.051000000000000000000000000000010000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................AGTCGATCTAGCCATGTCCGTCTG................................................24200.051000000000000000000000000000001000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................AGGAAGCATTTCCGACCCC...................................................................................................................................19200.051000000000000000000000000000000000000000000000000000000000000001
........................................................................................................................................................................................................................................................................................................................................AACAGGCAGAAGGAAGCATTT...........................................................................................................................................21200.051000000000000000000000000000000100000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................TCAATAGCCGAGTCGATCTAG.............................................................21200.051000000000000000010000000000000000000000000000000000000000000000
droGri2
TAAG--C-------------AGT-------------------TGAATAAATTTAT-----------------------------------------------------------------------------------------------------------------------------------TT---------------------T----------ACAAT---------------TT-----T-TGTTTTTTATACCCTGAACCCATTGAAAAT----GGGTAAAAAGGGTATAATGGCTTTGTGCAAAT-------GTATGCAACAGGCTGAAGGAAGCATCTCCGACCCCATAAAGTATATATATTCTTGATCAG----------------------GGTCAACAGTCGAGTCGATATAGCCATGTTCCTCTGTCCGTCCGTC------------TGTCT----------------GTATGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
CAAG--A----------ATCAAC---TC--TT-G----------TTAAA---------------------AAAGAAAA----GAAACAAAGAAAAGTAG-------------------------------------AAG--------CTA-----------------------------------------------------------------AA--------------------------------AATTTTTTATACCATACACCCAT----------AGGGT-GAAATGGTATATTAAAGTCGCCAAAAT-------GTATGTAACAGGCAGAAGGAAGCATCTCCGACCCCACAAAGTATATATATTCTTGATCAG----------------------GATCAAAAACCGAGTCGATCTAGCCATGTCCGTCTGTCCGTCCGTCC----G----TCCGTCC----------------GTATGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................................................................................................................................................................................................................................................................................................................................................................................................................TCAAAAACCGAGTCGATCTAGCCATG........................................................26200.45900090
............................................................................................................................................................................................................................................................................................................................................................................................................................ACCGAGTCGATCTAGCCATGTCCGT...................................................25200.20400040
..........................................................................................................................................................................................................................................................................................................................................................................................TCAG----------------------GATCAAAAACCGAGTCGATC................................................................24200.15303000
......................................................................................................................................................................................................................................................................................................................................................................................................................TCAAAAACCGAGTCGATCTAGCCATGT.......................................................27200.10200020
...............................................................................................................................................................................................................................................................................T----------AGGGT-GAAATGGTATATTAAAG.......................................................................................................................................................................................23200.10200020
.................................................................................................................................................................................................................................................................................................AAATGGTATATTAAAGTCGC...................................................................................................................................................................................20200.10200200
..........................................................................AAAA----GAAACAAAGAAAAGTAG-------------------------------------AAG--------C....................................................................................................................................................................................................................................................................................................................................................25160.06101000
..............................................................................................................................................................................................................................................................................................T-GAAATGGTATATTAAAGTCGCC..................................................................................................................................................................................23200.05100010
........................................................................................................................................................................................................................................................................................................................................................................................................................AAAAACCGAGTCGATCTAGCCATGT.......................................................25200.05100100
........................................................................................................................................................................................................................................................................................................................................................................................................................................TAGCCATGTCCGTCTGTC..............................................18200.05100010
.....................................................................................................................................................................................................................................................................................................................................TGTAACAGGCAGAAGGAAGCATC............................................................................................................................................23200.05100100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGCCATGTCCGTCTGTCCG............................................21200.05100001
....................................................................................................................................................................................................................................................................................................TGGTATATTAAAGTCGCCAAAAT-------GTA...................................................................................................................................................................26200.05101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................AAACCGAGTCGATCTAGCCATG........................................................22200.05101000
..................................................................................................................................................................................................................................................................................................................................GTATGTAACAGGCAGAAGGAAGCAT.............................................................................................................................................25200.05101000
..................................................................................................................................................................................................................................................................................................................CGCCAAAAT-------GTATGTAACAGGCAG.......................................................................................................................................................24200.05101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................GCCATGTCCGTCTGTCCGTCC.........................................21200.05100100
dp5
GTAC--TT--G-AGCAC---------------TG---------------------------------------------------------------------------------------------------------A--------TGTCATAAAAGGCACAAACAT-------T--------TTT---------------------T----------ACAATGCTCT----------TG-----GCACATTTTTATACCCGATACTCAA----AAT----GAGT-ATTGGGGTATATTAGATTTGTGGTAAAAGTGGATGTGTGTAACGTCCAGAAGGAATCGTTTCCGACCCCATAAAGTATATATATTCTTGATCAG----------------------CATCAATAGCCGAGTCGATTGAGCCCTGTCTGTCTGTCCGTCCGTCC----G----TCTGTCCGTCC------------CTATCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................................................................................................................................................................................................................................................................................................................................................................TTGATCAG----------------------CATCAATAGCCGAGTCG...................................................................2520107.8021560215600000000
......................................................................................................................................................................................................................................................................................................................................................................................TTGATCAG----------------------CATCAATAGCCGAGTC....................................................................242076.8515370153700000000
................................................................................................................................................................................................................................................................................................................TTTGTGGTAAAAGTGGATGTGTGT................................................................................................................................................................24203.156300000063000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCCCTGTCTGTCTGTCCG............................................21201.052102100000000
................................................................................................................................................................................................................................................................................................................TTTGTGGTAAAAGTGGATGTGTGTAA..............................................................................................................................................................26201.002000000002000
.........................................................................................................................................................................................................................................................................................................................................................................................ATCAG----------------------CATCAATAGCCGAGTC....................................................................21200.951901900000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTCTGTCCGTCCGTCC----G----T...........................21200.851701700000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTCCGTCCGTCC----G----TCTGTC......................21200.801601501000000
..........................................................................................................................................................................................................................................................................................................ATTAGATTTGTGGTAAAAGTG.........................................................................................................................................................................21200.701401400000000
..........................................................................................................................................................................................................................................................................................................................AAGTGGATGTGTGTAACGTC..........................................................................................................................................................20200.601201200000000
....................................................................................................................................................................................................................................................................................................................................................................................TCTTGATCAG----------------------CATCAATAGCCGA.......................................................................23200.551101100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCCCTGTCTGTCTGTCCGTC..........................................23200.501001000000000
.................................................................................................................................................................................................................................................................................................................TTGTGGTAAAAGTGGATGTGTGTAA..............................................................................................................................................................25200.4590900000000
................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAG----------------------CATCAATA............................................................................22200.4590900000000
...........................................................................................................................................................................................T---------------------T----------ACAATGCTCT----------TG-----GCACATT..........................................................................................................................................................................................................................................21200.4080800000000
..........................................................................................................................................................................................................................................................................................................................................................................................TCAG----------------------CATCAATAGCCGAGTCGATTG...............................................................25200.4080800000000
..................................................................................................................................................................................................................................................................TACCCGATACTCAA----AAT----GAGT-ATTG....................................................................................................................................................................................................25200.4080800000000
............................................................................................................................................................................................................................................................................TCAA----AAT----GAGT-ATTGGGGT................................................................................................................................................................................................19200.3570700000000
..............................................................................................................................................................................................................................................................................................T-ATTGGGGTATATTAGA........................................................................................................................................................................................17200.3570000000700
........................................................................................................................................................................T-------T--------TTT---------------------T----------ACAATGCTCT----------TG-----GCACA............................................................................................................................................................................................................................................23200.3570510000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGTCTGTCCGTCCGTCC----.................................20200.3060600000000
................................................................................................................................................................................................................................................................TATACCCGATACTCAA----AAT----GAGT-ATTG....................................................................................................................................................................................................27200.2550500000000
................................................................................................................................................................................T--------TTT---------------------T----------ACAATGCTCT----------TG-----GCAC.............................................................................................................................................................................................................................................21200.2550302000000
.................................................................................................................................................................................................................................................................................................................................................................................TATTCTTGATCAG----------------------CATCAATAGCCGA.......................................................................26200.2550500000000
...................................................................................................................................................................................................................................TCT----------TG-----GCACATTTTTATACCCGATAC............................................................................................................................................................................................................................2640.2510000000010
..........................................................................................................................................................................................TT---------------------T----------ACAATGCTCT----------TG-----GCACATTT.........................................................................................................................................................................................................................................23200.2550500000000
...........................................................................................................................................................................................T---------------------T----------ACAATGCTCT----------TG-----GCACATTTTT.......................................................................................................................................................................................................................................24200.2550500000000
..........................................................................................................................................................................................TT---------------------T----------ACAATGCTCT----------TG-----GCACATTTTT.......................................................................................................................................................................................................................................25200.2040300000010
........................................................................................................................................................................................................................................................................................................................................................................................................................AATAGCCGAGTCGATTGAGCCC..........................................................22200.2040400000000
..................................................................................................................................................................................................................................................................................................................TGTGGTAAAAGTGGATGTGTG.................................................................................................................................................................21200.2040040000000
................................................................................................................................................................................T--------TTT---------------------T----------ACAATGCTCT----------TG-----GCACATTTTT.......................................................................................................................................................................................................................................27200.2040000000400
..........................................................................................................................................................................................................................................................................................................................................................................GTATATATATTCTTGATCAG----------------------CA..................................................................................22200.2040400000000
........................................................................................................................................................................T-------T--------TTT---------------------T----------ACAATGCTCT----------TG-----GC...............................................................................................................................................................................................................................................20200.2040400000000
......................................................................................................................................................................................................................................................................................................GTATATTAGATTTGTGGTAAA.............................................................................................................................................................................21200.2040400000000
.............................................................................................................................................................................................................................................................................................................................................................................................G----------------------CATCAATAGCCGAGTCGATTGAG.............................................................24200.1530300000000
................................................................................................................................................................................T--------TTT---------------------T----------ACAATGCTCT----------TG-----GCACATT..........................................................................................................................................................................................................................................24200.1530300000000
...............................................................................................................................................................................................................................................................................................................................................................................TATATTCTTGATCAG----------------------CATCAA..............................................................................21200.1530000003000
.............................................................................................................................................................................................................................................................................CAA----AAT----GAGT-ATTGGGGTATATTAG.........................................................................................................................................................................................25200.1530000000300
..................................................................................................................................................................................................................................................................................................TGGGGTATATTAGATTTGTG..................................................................................................................................................................................20200.1530300000000
................................................................................................................................................................................T--------TTT---------------------T----------ACAATGCTCT----------TG-----GCACATTT.........................................................................................................................................................................................................................................25200.1530300000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCCCTGTCTGTCTGTCCGT...........................................22200.1530000000030
..........................................................................................................................................................................................TT---------------------T----------ACAATGCTCT----------TG-----GCACAT...........................................................................................................................................................................................................................................21200.1530300000000
..........................................................................................................................................................................................TT---------------------T----------ACAATGCTCT----------TG-----GCACA............................................................................................................................................................................................................................................20200.1530210000000
............................................................................................................................................................................................................................................................................................................................................................................ATATATATTCTTGATCAG----------------------C...................................................................................19200.1020200000000
............................................................................................................................................................................................................................................................TTTTTATACCCGATACTCAA----AAT----GAG..........................................................................................................................................................................................................26200.1020200000000
.......................................................................................................................................................................AT-------T--------TTT---------------------T----------ACAATGCTCT----------TG-----GCACA............................................................................................................................................................................................................................................24200.1020110000000
..................................................................................................................................................................................................................................................................................................................TGTGGTAAAAGTGGATGTGTGT................................................................................................................................................................22200.1020000000200
................................................................................................................................................................................................................................................................................................................TTTGTGGTAAAAGTGGATGTGA..................................................................................................................................................................22200.1020000000020
...........................................................................................................................................................................................................................................................................CTCAA----AAT----GAGT-ATTGGGGTATAT............................................................................................................................................................................................24200.1020000000200
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTCCGTCCGTCC----G----TCTGTCC.....................23200.1020200000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAGCCCTGTCTGTCTGTCCG............................................22200.1020100000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGTCC----G----TCTGTCCGTCC------------.....19200.1020200000000
.......................................................................................................................................................................................................................................................................................................TATATTAGATTTGTGGTAAA.............................................................................................................................................................................20200.1020000000020
...........................................................................................................................................................................................T---------------------T----------ACAATGCTCT----------TG-----GCACA............................................................................................................................................................................................................................................19200.1020200000000
............................................................................................................................................................................................................................ACAATGCTCT----------TG-----GCACATTTT........................................................................................................................................................................................................................................21200.1020200000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCCCTGTCTGTCTGTCCGTCCGT.......................................26200.1020200000000
..........................................................................................................................................................................................................................................................................................................................................CGTCCAGAAGGAATCGTTTC..........................................................................................................................................20200.1020200000000
..................................................................................................................................................................CAAACAT-------T--------TTT---------------------T----------ACAATGCTCT----------TG-----GCACA............................................................................................................................................................................................................................................29200.1020020000000
......................................................................................................................................................................................................................................................................................................GTATATTAGATTTGTGGTAAAAGTGG........................................................................................................................................................................26200.1020000000020
..........................................................................................................................................................................................TT---------------------T----------ACAATGCTCT----------TG-----GCACATTTT........................................................................................................................................................................................................................................24200.1020200000000
.................................................................................................................................................................................................................................................................................................................TTGTGGTAAAAGTGGATGTGT..................................................................................................................................................................21200.1020000000020
.......................................................................................................................................................................................................................................................................................................................TAAAAGTGGATGTGTGTAACG............................................................................................................................................................21200.1020000000200
.........................................................................................................................................................................................TTT---------------------T----------ACAATGCTCT----------TG-----GCAC.............................................................................................................................................................................................................................................20200.1020200000000
........................................................................................................................................................................T-------T--------TTT---------------------T----------ACAATGCTCT----------TG-----G................................................................................................................................................................................................................................................19200.1020200000000
............................................................................................................................................................................................................................................................................................................TAGATTTGTGGTAAAAGTGG........................................................................................................................................................................20200.1020000000200
..........................................................................................................................................................................................................................................................................................................................AAGTGGATGTGTGTAACG............................................................................................................................................................18200.1020000000200
.........................................................................................................................................................................................................................................................................................................................................................................................................................ATAGCCGAGTCGATTGAG.............................................................18200.1020000000020
..............................................................................................................................................................................................................................................................................................................................................................................................................................CGAGTCGATTGAGCCCTGTCT.....................................................21200.1020000002000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTGTCTGTCCGTCCGTC......................................20200.1020000002000
.................................................................................................................................................................................................................................................................................................................TTGTGGTAAAAGTGGATGTGTGTA...............................................................................................................................................................24200.1020000002000
....................................................................................................................................................................................................................................................................................................................TGGTAAAAGTGGATGTGT..................................................................................................................................................................18200.1020200000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TAGCCGAGTCGATTGAGCCC..........................................................20200.0510000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCCCTGTCTGTCTGTCC.............................................19200.0510000000100
.................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGATTGAGCCCTGTCTGTCT.................................................22200.0510100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTCTGTCTGTCCGTCCGTCC----G----............................23200.0510100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................ATAGCCGAGTCGATTGAGCC...........................................................20200.0510001000000
......................................................................................................................................................................................................................................................................................................................GTAAAAGTGGATGTGTGTA...............................................................................................................................................................19200.0510000000001
........................................................................................................................................................................T-------T--------TTT---------------------T----------ACAATGCTCT----------TG-----GCACATTTT........................................................................................................................................................................................................................................27200.0510100000000
.........................................................................................................................................................TAAAAGGCACAAACAT-------T--------TTT---------------------T----------ACA.........................................................................................................................................................................................................................................................................24200.0510100000000
....................................................................................................................................................................................................................................................................................................................................GTGTAACGTCCAGAAGGAATCG..............................................................................................................................................22200.0510100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTGTCTGTCTGTCCGTCCGTC......................................23200.0510100000000
........................................................................................................................................................................................................................................................................................................................................................CGTTTCCGACCCCATAAAGTATATATA.....................................................................................................................27200.0510100000000
..................................................................................................................................................................................................................................................................................................................TGTGGTAAAAGTGGATGTG...................................................................................................................................................................19200.0510000010000
................................................................................................................................................................................T--------TTT---------------------T----------ACAATGCTCT----------TG-----GCA..............................................................................................................................................................................................................................................20200.0510100000000
.................................................................................................................................................................................................................................................................................................................TTGTGGTAAAAGTGGATGT....................................................................................................................................................................19200.0510010000000
................................................................................................................................................................................................................................................................................................................TTTGTGGTAAAAGTGGATGTGTGTA...............................................................................................................................................................25200.0510000100000
.....................................................................................................................................................................ACAT-------T--------TTT---------------------T----------ACAATGCTCT----------TG-----.................................................................................................................................................................................................................................................21200.0510100000000
..........................................................................................................................................................................................TT---------------------T----------ACAATGCTCT----------TG-----GCACATA..........................................................................................................................................................................................................................................22200.0510100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTCTGTCTGTCCGTCCGT.......................................20200.0510000001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCCCTGTCTGTCTGTCC.............................................20200.0510001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGTCTGTCTGTCCGTCCGT.......................................21200.0510000001000
...........................................................................................................................................................................................T---------------------T----------ACAATGCTCT----------TG-----GCACATTTT........................................................................................................................................................................................................................................23200.0510100000000
......................................................................................................................................................................................................................................................................................................................GTAAAAGTGGATGTGTGTAAC.............................................................................................................................................................21200.0510000000100
..........................................................................................................................................................................................................................................................................................................................................................................................................................TAGCCGAGTCGATTGAGCCCT.........................................................21200.0510000010000
.............................................................................................................................................................................................................................................................................................................................................CCAGAAGGAATCGTTTCCGACCCCAT.................................................................................................................................26200.0510000100000
....................................................................................................................................................................................................................................................................................................................................GTGTAACGTCCAGAAGGAATCGTTT...........................................................................................................................................25200.0510000010000
...............................................................................................................................................................................................................................................................................................................ATTTGTGGTAAAAGTGGATGTGT..................................................................................................................................................................23200.0510010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCCCTGTCTGTCTGTC..............................................19200.0510000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AGCCCTGTCTGTCTGTCCGTC..........................................21200.0510000001000
..........................................................................................................................................................AAAAGGCACAAACAT-------T--------TTT---------------------T----------ACAA........................................................................................................................................................................................................................................................................24200.0510000000010
..........................................................................................................................................................................................TT---------------------T----------ACAATGCTCT----------TG-----GCACATT..........................................................................................................................................................................................................................................22200.0510010000000
............................................................................................................................................................................................................................................................................................................................GTGGATGTGTGTAACGTCCAGAAG....................................................................................................................................................24200.0510100000000
....................................................................................................................................................................................................................................................................................................................................................GAATCGTTTCCGACCCCATAAAGT............................................................................................................................24200.0510000000100
................................................................................................................................................................................T--------TTT---------------------T----------ACAATGCTCT----------TG-----GCACATTTT........................................................................................................................................................................................................................................26200.0510100000000
....................................................................................................................................................................................................................................................................................................................................................................CATAAAGTATATATATTCTTG...............................................................................................................21200.0510000000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTCTGTCCGTCCGTCC----G----TCTGTC......................26200.0510000000100
............................................................................................................................................................................................................................................................................................................................................................TCCGACCCCATAAAGTATATA.......................................................................................................................21200.0510000000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTGTCTGTCTGTCCGTCC.........................................20200.0510000000010
..............................................................................................................................................................................................................................AATGCTCT----------TG-----GCACATTT.........................................................................................................................................................................................................................................18200.0510100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCCGTCC----G----TCTGTCCGTCC------------.....21200.0510000010000
.................................................................................................................................................................................................................................................................................................................TTGTGGTAAAAGTGGATGTGTGTAACGT...........................................................................................................................................................28200.0510010000000
..................................................................................................................................................................................................................................................................................................................................................................................ATTCTTGATCAG----------------------CATCAATA............................................................................20200.0510000000010
........................................................................................................................................................................T-------T--------TTT---------------------T----------ACAATGCTCT----------TG-----GCACATTT.........................................................................................................................................................................................................................................26200.0510100000000
...........................................................................................................................................................AAAGGCACAAACAT-------T--------TTT---------------------T----------AC..........................................................................................................................................................................................................................................................................21200.0510100000000
...............................................................................................................................................................................................................................................................................................................................................................................TATATTCTTGATCAG----------------------CATC................................................................................19200.0510100000000
......................................................................................................................................................................CAT-------T--------TTT---------------------T----------ACAATGCTCT----------TG-----GCAC.............................................................................................................................................................................................................................................24200.0510000000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTCCGTCCGTCC----G----TCTG........................20200.0510000100000
..........................................................................................................................................................................................................................................................................................................................................................................GTATATATATTCTTGATCAG----------------------....................................................................................20200.0510100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCCCTGTCTGTCTGTCCGTCCG........................................25200.0510000001000
..............................................................................................................................................................................................................................................................................................................................................CAGAAGGAATCGTTTCCGACCCCA..................................................................................................................................24200.0510000000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................CCCTGTCTGTCTGTCCGTCCG........................................21200.0510100000000
....................................................................................................................................................................................................................................................................................................................................................................................TCTTGATCAG----------------------CATCAATA............................................................................18200.0510100000000
............................................................................................................................................................................................................................................................................................................................................................TCCGACCCCATAAAGTATATATAT....................................................................................................................24200.0510100000000
..................................................................................................................................................................................................................................................................................................................TGTGGTAAAAGTGGATGTGTGTA...............................................................................................................................................................23200.0510000100000
..............................................................................................................................................................................................................................AATGCTCT----------TG-----GCACATTTTT.......................................................................................................................................................................................................................................20200.0510100000000
...........................................................................................................................................................................................................................................................................................GAGT-ATTGGGGTATATTAGA........................................................................................................................................................................................20200.0510000001000
.................................................................................................................................................................................................................................................................................................................TTGTGGTAAAAGTGGATGTG...................................................................................................................................................................20200.0510000010000
............................................................................................................................................................................................................................................................................................................................................................................ATATATATTCTTGATCAG----------------------CA..................................................................................20200.0510000000010
..............................................................................................................................................................................................................................................................................................................GATTTGTGGTAAAAGTGGATGT....................................................................................................................................................................22200.0510100000000
................................................................................................................................................................................T--------TTT---------------------T----------ACAATGCTCT----------TG-----GCACAT...........................................................................................................................................................................................................................................23200.0510100000000
..........................................................................................................................................................................................................................................................CATTTTTATACCCGATACTCAA----AAT----G............................................................................................................................................................................................................26200.0510100000000
............................................................................................................................................................................................................................................................................TCAA----AAT----GAGT-ATTGGGGTA...............................................................................................................................................................................................20200.0510000010000
........................................................................................................................................................................T-------T--------TTT---------------------T----------ACAATGCTCT----------TG-----GCACAT...........................................................................................................................................................................................................................................24200.0510010000000
...........................................................................................................................................................................................T---------------------T----------ACAATGCTCT----------TG-----GCACAT...........................................................................................................................................................................................................................................20200.0510100000000
........................................................................................................................................................................T-------T--------TTT---------------------T----------ACAATGCTCT----------TG-----GCACATT..........................................................................................................................................................................................................................................25200.0510100000000
droPer2
GTAC--TT--G-AGCAC---------------TG---------------------------------------------------------------------------------------------------------A--------TGTCATAAAAGGCACAAACAT-------T--------TTT---------------------T----------ACAATGCTCT----------TG-----GCACATTTTTATACCCGATACTCAA----AAT----GAGT-ATTGGGGTATATTAGATTTGTGGTAAAAGTGGATGTGTGTAACGTCCAGAAGGAATCGTTTCCGACCCCATAAAGTATATATATTCTTGATCAG----------------------CATCAATAGCCGAGTCGATTGAGCCCTGTCTGTCTGTCCGTCCGTCC----G----TCTGTCCGTCC------------CTATCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................................................................................................................................................................................................................................................................................................................TAACGTCCAGAAGGAATCGTTTCCGA.......................................................................................................................................26200.153030000
.......................................................................................................................................................................................................................................................GCACATTTTTATACCCGATAC............................................................................................................................................................................................................................21170.061010000
........................................................................................................................................................................T-------T--------TTT---------------------T----------ACAATGCTCT----------TG-----GC...............................................................................................................................................................................................................................................20200.051010000
droAna3
GAAA--T-------------CGT---CT--TA-----TTGCAAGTTTAA---------------------ACTGAACA----GAAAGGCCT---------------------------------------------TAATTCTACATCTA-----------------------------------------------------------------TTA--ATT-------TTTTA--TT-TT-----ATTTATTTTTATACCCTT-----GC----------A-------GAGGGTATTATAATTTTGGTCAAAA-------GTGTGCAACGCAGTGAAGGAGACATCTCCGACCCTATAAAGTATATATATTCTTGATCAG----------------------GATCACCTCCTGAGTCGATATAAGCATGTCCGTCTGTCCGTCTGTCC----G----TCGGTCCGTCTGT----------CCGTCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................................................................................................................................................................................................................................................CGCAGTGAAGGAGACATCTCCGACC.....................................................................................................................................25202.10420420000
...................................................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAG----------------------GATCACCTC...........................................................................20201.10220022000
..................................................................................................................................................................................................................................................................................................................................................................................................................................TCGATATAAGCATGTCCGTCTGTCCGTC..........................................28200.90180180000
...............................................................................................................................................................................................................................................................................................................TTTTGGTCAAAA-------GTGTGCAACG............................................................................................................................................................22200.459009000
.........................................................................................................................................................................................................................................................................................................................................ACGCAGTGAAGGAGACATCTCC.........................................................................................................................................22200.408080000
......................................................................................................................................................................................................................................................................................................................................................................................................................................TATAAGCATGTCCGTCTGTCCGTCTGT.......................................27200.357070000
....................................................................................................................................................................................................................................................................................................................................GTGCAACGCAGTGAAGGAGACATCT...........................................................................................................................................25200.357070000
.................................................................................................................................................................................................................................................................................................................TTGGTCAAAA-------GTGTGCAACGCAGTGA......................................................................................................................................................26200.306600000
......................................................................................................................................................................................................................................................................CTT-----GC----------A-------GAGGGTATTATAATTTTGGTC.................................................................................................................................................................................27200.255050000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GAGTCGATATAAGCATGTC......................................................19200.255000050
........................................................................................................................................................................................................................................................................................................................AAA-------GTGTGCAACGCAGTGAAGGA..................................................................................................................................................23200.204004000
.........................................................................................................................................................................................................................................................................................................................................................................AGTATATATATTCTTGATCAG----------------------....................................................................................21200.204400000
....................................................................................................................................................................................................................................................................................................................................GTGCAACGCAGTGAAGGAGACATC............................................................................................................................................24200.204000040
...................................................................................................................................................................................................................................................................................................................................................................................................................................CGATATAAGCATGTCCGTCTG................................................21200.204200020
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTCTGTCC----G----TCGGTCCGTCTGT----------CCGT.28200.102100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGTCC----G----TCGGTCCGTCTG................21200.102200000
...............................................................................................................................................................................................................................................................................................................TTTTGGTCAAAA-------GTGTGCAACGCAGTG.......................................................................................................................................................27200.102200000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GAGTCGATATAAGCATGTCCGTCTGT...............................................26200.051100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................CACCTCCTGAGTCGATATAAGCAT.........................................................24200.051100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................CTCCTGAGTCGATATAAGCATGTCC.....................................................25200.051010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCTGTCC----G----TCGGTCCGTCT.................21200.051000010
.............................................................................................................................................................................................................................................................................................................................................................................................G----------------------GATCACCTCCTGAGTCGATATAAG............................................................25200.051100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCCGTCTGTCCGTCTGTCC----G----TCGG........................27200.051100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGTCTGTCCGTCTGTCC----G----TCGGTC......................25200.051010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................CGATATAAGCATGTCCGTCTGT...............................................22200.051000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCATGTCCGTCTGTCCGTCT.........................................22200.051000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTGTCCGTCTGTCC----G----TCGG........................21200.051000010
...........................................................................................................................................................................................................................................................ATTTTTATACCCTT-----GC----------A-------GAGGGTAT..............................................................................................................................................................................................25200.051100000
........................................................................................................................................................................................................................................................................................................................................................................................................................ACCTCCTGAGTCGATATAAGCATG........................................................24200.051100000
droBip1
GAAG--C-------------CA----------TGCTGACATAAAGA----A--A-TG--------------ATCGAAGAGCAAAAGTGCTGCAAATTAC-------------------------------------GA-----------------------------------------------------------------------------------G-------------------------T-TAGTAATTATACCCTT-----GC----------A-------GAGGGTATTATAATTTTGTCCAAAA-------GTGTGCAACGCAGTGAAGGAGACATCTCCGACCCTATAAAGTATATATATTCTTGATCAG----------------------GATCACCTCCTGAGTTGATATGAGCATGTCCGTCTGTCCGTCTGTCC----G----TCTGTCCGTCTGT----------CTATCSizeHit CountTotal NormTotal
No Reads
droKik1
GTGC--TA--G--------------------------------------AA--A-CAGTTG--------------------------------------GGAATTCTAAGAA-----A------------------AAG--------CTA------------GC---GGAAA---------------G----T-----ACTTTTTGTGA-ACCTTTA--------------------------------TTATTTTTATACCCTT------------------------GCAGGGTATTATAATTTCAGTCAGAA-------GTTTGCAACGCAGTGAAGGAGACGTTTCCGACCCTATAAAGTATATATATTCTTGATCAG----------------------CATCAACAGCCGAGTCGATCTAGCCATGTCCGTCTGTCCGTCTGTCC----G----TCTGTCC----------------GTCTGSizeHit CountTotal NormTotal
No Reads
droFic1
GCAG--G-------------------------------------GATAATTTGAT-TTCA----------------------------------------------------------------CACA-------TTG-A--------CGTC------------------AA---------------T----GC--GTAC-------------------------------------------------ATTTTATTATACCCTT-----GC----------AGAGC-AAAAGGGTATTATAATTTCAGTCAGAA-------GTTTGCAACGCAGTGAAGGAGACACCTCAGACCCCATAAAGTATATATATTCTTGATCAG----------------------AATCACGAGCAGAATCGAAATATGTATGTACGTCTGTCCGTCTGTCC----G----TCTGTCC----------------GTCTGSizeHit CountTotal NormTotal
No Reads
droEle1
CTCC--CA--T-A-------------------------------G----GA--A-CAATCG--------------------------------------AAAAAAA------------------------------------------------------TAAAAAAAA-------T--------TAT---------------------A----------GCTTTGCTGT----------TT-----T-TAATTTTTATACCCTT-----GC----------A-------GAGGGTATTATAATTTCAGTCAGAA-------GTTTGCAACGCAGTGAAGGAGACGTTTCCGACCCTATAAAGTATATATATTCTTGATCAG----------------------CATCACTAGTAGAGTCGATCTAGCCATGTCCGTCTGTCCGTCCGTCT----G----TCCGTCT----------------GT---SizeHit CountTotal NormTotal
No Reads
droRho1
TAGT--TA--T-A-------------------------------G----GA--A-CTATTGCAAGAGCTCTCTCACCAAG---------------------------------------CTCT-------------TAAGGG---------------------G---GGGTA---------------T------------------------T--GTA--TTT-------TTTTT--TT-CT-----TTGCATTTTTATACCCGTTACTCGT----------AGAGT-AAAAGGGTATATTGTATTCGTGCAAAA-------GTATGTAACAGGTAGAAGGAAGCGTTTCCGACCCTATAAAGTATATATATTCTTGTTCAG----------------------GATTACTAGCCGAGTCGATCTAGCCATGTCCGTCTGTCCGTCTGTCT----G----TCTGTCC----------------GTATTSizeHit CountTotal NormTotal
No Reads
droBia1
AGGG--G---------------------------------------TAA---------------------TTGCAATATTTGA-----------------------------------------------------AAG-----------TT------------------AA---------------G----AT--GTAT----------A------TTA-T-------T--------C-CT-----C-TACATCTTTTACCCGTTACTCGT----------AGAGC-AAAAGGGTATACCGGATTTGTCAGAAA-------GTATGTAACAGGTAAAAAGAAGCGTTTCCGATCCCATAAAGTATATATATTCTTGATCAG----------------------GATCACTAGCCGAG---------CCATGTCCGTCTATCCGTCTGTCC----G----TCCGTCC----------------GTATGSizeHit CountTotal NormTotal
No Reads
droTak1
AGGG--C-AAGA-----T---------TTTG-CG------CTAATATAA---------------------AATCA----------GTGA----------AAAGGTA-----------------------------TGGG------------------------C---GGGAA---------------T----T-----A----------------------G-------T-----------G-----T-TACTTTTTATACCCGTTACTCGT----------AGAGT-AAAAGGGTATACTAGATTCGTGCAAAA-------GTATGTAACAGCTAGAAGGAAGCGTTTCCGACCCCATAAAGTATATATATTCTTGATCAG----------------------GGTCACTAGCCGAGTCGATCTAGCCATGTCCGTCTGTCCGTCTGTCC----G----TCTGTCCGTCTGTCTGTCTGTCTGTATGSizeHit CountTotal NormTotal
No Reads
droEug1
GAGG--ATAAGT-----AGCCTGCTGAT--TT-----GTGGATGGATAAGCTGAT-CT-------------------TAGTAC-----------------------------------------------------AAG--------ATG-------------------TGA--------------------------------------A------TTG-G-------CC-TAACCATTGC-----C-CACTTTTTATATCCGTCACTCAT----------GGAGT-AAAAGGGTATACTAGATTCGTTAAAAA-------GTATGTAAAAGGTAGAAGGAAGCGTTTCCGACCCTATAAAGTACATATATACTTGATCAG----------------------TATTAATAGCGAAGTCGATTAGGCCATGTCCGTCTGTCCGTCCGAACGTCCGTCCGTCTGTCC----------------GTATGSizeHit CountTotal NormTotal
No Reads
dm3
ACGA--G-------------------------------------TATAAGCCGAG-TACAGCAAGCGAC------------------------------------CT-----ACCAAAGATTT-------------------------------------------------------------------------------------------TAA----G-------------------T-----T-CAATTAA--------------------AATAGTTGGGT-AAAGGTGTATACTAGATTCGTTCAAAA-----ATGTATGTAACA----GAAGGAAGCGTTTCCGACCCTATAAATTATATATATTCTTGATCAG----------------------GATCAATAGCCGAGTCGATCTACCCATATCCGTCGGCCGGTCTGTCT----GTCCTTCATTCC----------------GTATGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................................................................................................................................................................................................................AATTAA--------------------AATAGTTGGGT-AAAG....................................................................................................................................................................................................2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TACCCATATCCGTCGGCCGGTCTGTC......................................2616.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................TTGATCAG----------------------GATCAATAGCCGAGTCG...................................................................25203.70741000000000000000000000000000000000000000002000000000000000000000000000000000000000000010000000000000000000000000000000000000000000001000000000001600000000016000000000000000000000000000000000300040000000000014000000000000000502000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002070000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................TCGATCTACCCATATCCGTCG.................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................TTGATCAG----------------------GATCAATAGCCGAGTCGA..................................................................26202.6052000000000000000000000001000000000000000000000000000000000000000000000000000002000000200000000000000000000000000000000000000000000000003000000000140000000000000000000000000000000000000000000000000000000000000000000004000002400020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................TTGATCAG----------------------GATCAATAGCCGAGTC....................................................................24202.204400000000000000000000000000000000000000009000000030000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000030000000000000000000000000000000000000000000900000000000000000000001100400000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................CATATCCGTCGGCCGGTCTGTCT----GTCCT............................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................CCGAGTCGATCTACCCATATCCGTCGGCCA.............................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................TCTACCCATATCCGTCGGCCG.............................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGTCGGCCGGTCTGTCT----GTC..............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................T-----ACCAAAGATTT-------------------------------------------------------------------------------------------TAA----G-------------------T-----T-CAATTAA--------------------AA..................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................TAACA----GAAGGAAGCGTTTCCG........................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................GGGT-AAAGGTGTATACTAGATTCG....................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................TTGATCAG----------------------GATCAATAGCCGAG......................................................................22200.85170000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000600000020000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................TTGATCAG----------------------GATCAATAGCCGAGT.....................................................................23200.80160000001000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000001000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000400000000
...............................................................................................................................................................................................................................................................................................................................................................................TATATTCTTGATCAG----------------------GATCAATAGCC.........................................................................26200.70140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000002000000000000000000000000000000000000000000000000000000000200100000000100000000000000000000200000000000000000000000000000000000000000000000000000000000000000000001000000400000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................TCTTGATCAG----------------------GATCAATAGCCGAGTC....................................................................26200.60120000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000010000000000000000000000000000020000010000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000100000000
......................................................................................................................................................................................................................................................................................................................................................................................TTGATCAG----------------------GATCAATAGCCG........................................................................20200.55110000000000000000000000000000000000000000001020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000001500000000000000000000000000100000000
......................................................................................................................................................................................................................................................................................................................................................................................TTGATCAG----------------------GATCAATAGCC.........................................................................19200.55110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000100000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000080000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................TCTTGATCAG----------------------GATCAATAGCC.........................................................................21200.55110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000001000080000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAG----------------------GATCAATAGCCGAG......................................................................25200.50100000000000000000000000000000000000000000000000020010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000010000000000000000000200000
.....................................................................................................................................................................................................................................................................................................................................................................................CTTGATCAG----------------------GATCAATAGCCG........................................................................21200.50100000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000010000000000000000000000100000001000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................AACA----GAAGGAAGCGTTTCCGA.......................................................................................................................................2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................AG----------------------GATCAATAGCCGAGTCGATCTA..............................................................24200.4590000000000000000000000000000000000000000000000000000100001000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000200220000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................TTGATCAG----------------------GATCAATAGCCGAGTCGAT.................................................................27200.4590000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000010004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................ATCAG----------------------GATCAATAGCCGAGTC....................................................................21200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000060000000000000000000000000000000001000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................ATCAATAGCCGAGTCGATCTA..............................................................21200.4590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000040000000000000000000000000000001000000000000003000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................TATTCTTGATCAG----------------------GATCAATAGCCGAG......................................................................27200.4080000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000100000
.......................................................................................................................................................................................................................................................................................................................................................................................TGATCAG----------------------GATCAATAGCCGAG......................................................................21200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................TGATCAG----------------------GATCAATAGCCGAGTCGA..................................................................25200.4080000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................TCAG----------------------GATCAATAGCCGAGTCGATC................................................................24200.3570000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000201000
................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAG----------------------GATCAAT.............................................................................21200.3570000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002010000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
............................................................................................................................................................................................................................................................................................................................................................................................AG----------------------GATCAATAGCCGAGTCGATCTACC............................................................2630.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
AATC--TG--G-A---------------------------------T------------------------------AAGAAG-----------------------------------------------------AAG--------ATG------------------GCGA---------------T------------------------GGTAC----T-------------------TTCTCTTCACTTCAATATACCCGTTACTCGT----------AGAGT-AAAAGGGTATACGACATTCGTTGAAAA-------GTATGTAACACGCAGAAAAAATCGTTTCCGACTATAAAAAGAATATATATTCTTGATCAG----------------------GATCAATAGGCGAATCGGTGTAGACATGTCTGTCAGTCCCACTGTCC----G----TCTGTCC----------------GTACGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...................................................................................................................................................................................................................................................................................................................................TATGTAACACGCAGAAAAAATCGTT............................................................................................................................................25265.0013000000032710828000000
..........................................................................................................................................................................................................................................................................ACTCGT----------AGAGT-AAAAGGGTAT..............................................................................................................................................................................................21207.301460000146000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................CAG----------------------GATCAATAGGCGAATCGGT.................................................................2226.501300000052150000000
..................................................................................................................................................................................................................................................................................................................................................AAAAATCGTTTCCGACTATAAAAAGAA...........................................................................................................................2723.50700000013030000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTGTCAGTCCCACTGTCC----G----TC..........................2423.50700000010231000000
................................................................................................................................................................................................................................................................................................................TTCGTTGAAAA-------GTATGTAACACGCAGA......................................................................................................................................................2742.501000000005040010000
.......................................................................................................................................................................................................................................................................................................................................................................................TGATCAG----------------------GATCAATAGGCGAATCGGT.................................................................2622.50500000002011010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TAGACATGTCTGTCAGTCCCACTGTC......................................2621.50300000001011000000
..............................................................................................................................................................................................................................................................................................T-AAAAGGGTATACGACATTCGTTGAAA..............................................................................................................................................................................2721.50300000010200000000
....................................................................................................................................................................................................................................................................................................GGGTATACGACATTCGTTGAAAA-------GTA...................................................................................................................................................................2621.50300000003000000000
...........................................................................................................................................................................................................................................................................................................................................................................................CAG----------------------GATCAATAGGCGAATCGGTC................................................................2321.50300000021000000000
...........................................................................................................................................................................................................................................................................................................................................................TTCCGACTATAAAAAGAATATATA.....................................................................................................................2421.50300000000021000000
..........................................................................................................................................................................................................................................................................................................................................................................................TCAG----------------------GATCAATAGGCGAATCGGTC................................................................2421.50300000000003000000
....................................................................................................................................................................................................................................................................................................GGGTATACGACATTCGTTGAAAA-------......................................................................................................................................................................2321.50300000000030000000
...................................................................................................................................................................................................................................................................................................................................TATGTAACACGCAGAAAAAATCGTTT...........................................................................................................................................2621.50300000000021000000
............................................................................................................................................................................................................................................................................TCGT----------AGAGT-AAAAGGG.................................................................................................................................................................................................16201.2024000000000024000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................CAATAGGCGAATCGGTGTAGACAT.........................................................2421.00200000000002000000
.......................................................................................................................................................................................................................................................................................................................................................................................TGATCAG----------------------GATCAATAGGCGAATCGGTC................................................................2721.00200000000002000000
....................................................................................................................................................................................................................................................................................................................................................................TAAAAAGAATATATATTCTTGATCAG----------------------GA..................................................................................2821.00200000001010000000
..TC--TG--G-A---------------------------------T------------------------------AAGAAG-----------------------------------------------------AAG--------ATG------------------GCGA---------------T------------------------GGT.................................................................................................................................................................................................................................................................................2721.00200000002000000000
.........................................................................................................................................................................................................................................................................TACTCGT----------AGAGT-AAAAGGGTATACGA..........................................................................................................................................................................................2660.83500000031010000000
.................................................................................................................................................................................................................................................................................................................TCGTTGAAAA-------GTATGTAACACGCAGA......................................................................................................................................................2650.80400000001030000000
............................................................................................................................................................................................................................................................................TCGT----------AGAGT-AAAAGGGTATACGA..........................................................................................................................................................................................2370.71500010000004000000
..........................................................................................................................................................................................................................................................................................................................A-------GTATGTAACACGCAGAAAAAATCGTT............................................................................................................................................2720.50100000000010000000
........................................................................................................................................................................................................................................................................................................................................................CGTTTCCGACTATAAAAAGAATATATA.....................................................................................................................2720.50100000001000000000
............................................................................................................................................................................................................................................................................................................................................................................................AG----------------------GATCAATAGGCGAATCGGTGT...............................................................2320.50100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................CAG----------------------GATCAATAGGCGAATCGG..................................................................2120.50100000010000000000
.........................................................................................................................................................................................................................................................................................................................AA-------GTATGTAACACGCAGAAAAAATCGT.............................................................................................................................................2720.50100000000100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGTCCCACTGTCC----G----TCTGTCC----------------GTA..2620.50100000010000000000
....................................................................................................................................................................................................................................................TCTTCACTTCAATATACCCGTTACT...........................................................................................................................................................................................................................2520.50100000001000000000
...................................................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAG----------------------GATCAATAGGCGAAT.....................................................................2620.50100000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................AG----------------------GATCAATAGGCGAATCGGT.................................................................2120.50100000000000010000
............................................................................................................................................................................................................................................................................................................................................CGCAGAAAAAATCGTTTCCGACTATAAA................................................................................................................................2820.50100000000100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................GGCGAATCGGTGTAGACATGTCTGT...................................................2520.50100000000001000000
................................................................................................................................................................................................................................................................................................................................................GAAAAAATCGTTTCCGACTATAAAAAGAA...........................................................................................................................2920.50100000010000000000
...................................................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAG----------------------GATCAATAGGCGAATC....................................................................2720.50100000000001000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTGTCAGTCCCACTGTCC----G----T...........................2320.50100000010000000000
..........................................................................................................................................................................................................................................................................................................................................CACGCAGAAAAAATCGTTTCCGACTATA..................................................................................................................................2820.50100000001000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGTCAGTCCCACTGTCC----G----TCTGT.......................2520.50100000001000000000
...C--TG--G-A---------------------------------T------------------------------AAGAAG-----------------------------------------------------AAG--------ATG------------------GC..............................................................................................................................................................................................................................................................................................................................2020.50100000000100000000
............................................................................................................................................................................................................................................................................................................................................................TCCGACTATAAAAAGAATATATATT...................................................................................................................2520.50100000000010000000
..............................................................................................................................................................................................................................................................................................................................................CAGAAAAAATCGTTTCCGACTATAAA................................................................................................................................2620.50100000001000000000
......TG--G-A---------------------------------T------------------------------AAGAAG-----------------------------------------------------AAG--------ATG------------------GCGA---------------T------------------------GGTA................................................................................................................................................................................................................................................................................2620.50100000001000000000
...........................................................................................................................................................................................................................................................TTCAATATACCCGTTACTCGT----------AGAGT-........................................................................................................................................................................................................2620.50100000001000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TAGACATGTCTGTCAGTCCCACTGT.......................................2520.50100000000010000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCTGTCAGTCCCACTGTC......................................2120.50100000000010000000
................................................................................................................................................................................................................................................................................................................TTCGTTGAAAA-------GTATGTAACACGC.........................................................................................................................................................2440.50200002000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................TGATCAG----------------------GATCAATAGGCGAATCGGTT................................................................2720.50100000000001000000
.......................................................................................................................................................................................................................................................................................................................................................TCGTTTCCGACTATAAAAAGAATATA.......................................................................................................................2620.50100000000010000000
......................................................................................................................................................................................................................................................................................................................................................................................TTGATCAG----------------------GATCAATAGGCGAATCGG..................................................................2620.50100000000000010000
..........................................................................................................................................................................................................................................................................................................................................................................................TCAG----------------------GATCAATAGGCGAATCGG..................................................................2220.50100000000000010000
.ATC--TG--G-A---------------------------------T------------------------------AAGAAG-----------------------------------------------------AAG--------ATG------------------GC..............................................................................................................................................................................................................................................................................................................................2220.50100000000001000000
......................................................................................................................................................................................................................................................................................................................................GTAACACGCAGAAAAAATCGTTTCCGAC......................................................................................................................................2820.50100000000010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................ACATGTCTGTCAGTCCCACTGT.......................................2220.50100000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................AG----------------------GATCAATAGGCGAATCGGTC................................................................2220.50100000001000000000
............................................................................................................................................................................................................................................................TCAATATACCCGTTACTCGT----------AGAGT-A.......................................................................................................................................................................................................2620.50100000001000000000
.......................................................................................................................................................................................................................................................................................................................................TAACACGCAGAAAAAATCGTTTCCGAC......................................................................................................................................2720.50100000000000010000
......................................................................................................................................................................................................................................................................................................GTATACGACATTCGTTG.................................................................................................................................................................................1720.50100000000001000000
...................................................................................................................................................................................................................................................................................................................................TATGTAACACGCAGAAAAAATCGT.............................................................................................................................................2420.50100000000010000000
............................................................................................................................................................................................................................................................................................................................................................TCCGACTATAAAAAGAATATATATTC..................................................................................................................2620.50100000000010000000
...................................................................................................................................................................................................................................................................................................................................TATGTAACACGCAGAAAAAATCGTTTC..........................................................................................................................................2720.50100000000010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................TAGGCGAATCGGTGTA..............................................................1620.50100000000001000000
..TC--TG--G-A---------------------------------T------------------------------AAGAAG-----------------------------------------------------AAG--------ATG------------------GCGA---------------T------------------------GGTA................................................................................................................................................................................................................................................................................2820.50100000001000000000
...........................................................................................................................................................................................................................................................................................................................................................TTCCGACTATAAAAAGAATATATAA....................................................................................................................2520.50100000000100000000
............................................................................................................................................................................................................................................................................TCGT----------AGAGT-AAAAGGGTATACGACA........................................................................................................................................................................................2520.50100000000001000000
...............................................................................................................................................................................................................................................................................T----------AGAGT-AAAAGGGTATACGACATTCGT...................................................................................................................................................................................2720.50100000000001000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACTGTCC----G----TCTGTCC----------------GTAC.2120.50100000000010000000
...............................................................................................................................................................................................................................................................................................................................................AGAAAAAATCGTTTCCGACTATAAA................................................................................................................................2520.50100000000010000000
......TG--G-A---------------------------------T------------------------------AAGAAG-----------------------------------------------------AAG--------ATG------------------GCGA---------------T------------------------GGTAC----T-------------------.......................................................................................................................................................................................................................................................2820.50100000001000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TAGACATGTCTGTCAGT...............................................1720.50100000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................TTGATCAG----------------------GATCAATAGGCGAATCG...................................................................2520.50100000000000010000
..........................................................................................................................................................................................................................................................................................................................................CACGCAGAAAAAATCGTTTCCGACT.....................................................................................................................................2520.50100000001000000000
...........................................................................................................................................................................A---------------T------------------------GGTAC----T-------------------TTCTCTTCACTTCAATA......................................................................................................................................................................................................................................2520.50100000000100000000
...C--TG--G-A---------------------------------T------------------------------AAGAAG-----------------------------------------------------AAG--------ATG------------------GCG.............................................................................................................................................................................................................................................................................................................................2120.50100000001000000000
.............................................................................................................................................................................................................................................................................................................................................GCAGAAAAAATCGTTTCCGACTA....................................................................................................................................2320.50100000000010000000
.....................................................................................................................................................................................................................................................................................................................................................................................CTTGATCAG----------------------GATCAATAGGCGAATCGG..................................................................2720.50100000000010000000
.......................................................................................................................................................................................................................................................................................................................................................................................TGATCAG----------------------GATCAATAGGCGAA......................................................................2120.50100000000001000000
.......................................................................................................................................................................................................................................................................................................................................TAACACGCAGAAAAAATCGTTTCCGA.......................................................................................................................................2620.50100000001000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCTGTCAGTCCCACTGTCC----G----TCTGTC......................2820.50100000000001000000
............................................................................................................................................................................................................................................................................TCGT----------AGAGT-AAAAGGGTATACGAC.........................................................................................................................................................................................2420.50100000000001000000
..........................................................................................................................................................................................................................................................................................................................................................................GAATATATATTCTTGATCAG----------------------GAT.................................................................................2360.33200200000000000000
........................................................................................................................................................................................................................................................................TTACTCGT----------AGAGT-AAAAGGGTATACG...........................................................................................................................................................................................2660.33200000000200000000
........................................................................................................................................................................................................................................................................TTACTCGT----------AGAGT-AAAAGGGTATACGA..........................................................................................................................................................................................2760.33200000010100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................AATAGGCGAATCGGTC................................................................1630.33100000000001000000
............................................................................................................................................................................................................................................................................TCGT----------AGAGT-AAAAGGGTATACG...........................................................................................................................................................................................2270.29200000000002000000
....................................................................................................................................................................................................................................................................................................................TTGAAAA-------GTATGTAACACGCAGA......................................................................................................................................................2380.25200000020000000000
..............................................................................................................................................................................................................................................................................................................................................................................ATATATTCTTGATCAG----------------------GATCAATAGGC.........................................................................2740.25100000000010000000
................................................................................................................................................................................................................................................................................................................................................................................ATATTCTTGATCAG----------------------GATCAATAGGC.........................................................................2550.20100000000001000000
.......................................................................................................................................................................................................................................................................................................................AAAA-------GTATGTAACACGCAGA......................................................................................................................................................20100.20200000001001000000
.................................................................................................................................................................................................................................................................................................................................................................................TATTCTTGATCAG----------------------GATCAATAGGC.........................................................................2460.17100000000001000000
..........................................................................................................................................................................................................................................................................................................................................................................GAATATATATTCTTGATCAG----------------------GATC................................................................................2460.17100000000001000000
........................................................................................................................................................................................................................................................................................................................................................................AAGAATATATATTCTTGATCAG----------------------GA..................................................................................2460.17100000001000000000
..........................................................................................................................................................................................................................................................................ACTCGT----------AGAGT-AAAAGGGTATACGA..........................................................................................................................................................................................2560.17100000000100000000
...............................................................................................................................................................................................................................................................................T----------AGAGT-AAAAGGGTATACG...........................................................................................................................................................................................1970.14100000000001000000
..........................................................................................................................................................................................................................................................................................................................................................................................TCAG----------------------GATCAATAGGC.........................................................................1570.14100000000001000000
......................................................................................................................................................................................................................................................................................................................GAAAA-------GTATGTAACACGCAGA......................................................................................................................................................2190.11100000001000000000
............................................................................................................................................................................................................................................................................................................................................................................ATATATATTCTTGATCAG----------------------GATCA...............................................................................23200.10200000002000000000
............................................................................................................................................................................................................................................................................................................................................................................ATATATATTCTTGATCAG----------------------GATCAAT.............................................................................25200.10200100000100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTCC----G----TCTGTCC----------------GT...16200.10200000010001000000
............................................................................................................................................................................................................................................................................................................................................................................ATATATATTCTTGATCAG----------------------GAT.................................................................................21200.10200000000002000000
..................................................................................................................................................................................................................................................................................................................................GTATGTAACACGCAGA......................................................................................................................................................16110.09100000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................TTGATCAG----------------------GATCAATAGGCGAT......................................................................22120.08100000001000000000
..........................................................................................................................................................................................................................................................................................................................................................................GAATATATATTCTTGATCAG----------------------GATT................................................................................24130.08100000000001000000
..........................................................................................................................................................................................................................................................................ACTCGT----------AGAGT-AAAAGGGT................................................................................................................................................................................................19200.05100000000000100000
.............................................................................................................................................................................................................................................................................CGT----------AGAGT-AAAAGGG.................................................................................................................................................................................................15200.05100000000001000000
............................................................................................................................................................................................................................................................................TCGT----------AGAGT-AAAAGGGTATA.............................................................................................................................................................................................20200.05100000000001000000
................................................................................................................................................................................................................................................................................................................TTCGTTGAAAA-------GTATGTAACA............................................................................................................................................................21200.05100000000100000000
................................................................................................................................................................................................................................................................TATACCCGTTACTCGT----------AGAGT-AAAAG...................................................................................................................................................................................................26200.05100000001000000000
.............................................................................................................................................................................................................................................................................................................................................................................TATATATTCTTGATCAG----------------------GAT.................................................................................20200.05100100000000000000
................................................................................................................................................................................................................................................................................................................TTCGTTGAAAA-------GTATGTA...............................................................................................................................................................18200.05100000000001000000
...................................................................................................................................................................................................................................................................................................................GTTGAAAA-------GTATGTAA..............................................................................................................................................................16200.05100000000001000000
.........................................................................................................................................................................................................................................................................TACTCGT----------AGAGT-AAAAGGGT................................................................................................................................................................................................20200.05100000000001000000
droSec2
TCAA--A----------------------------------------------------------------------AAGTAC-----------------------------------------------------TAG------------------------C---TGTAA--------------------------------------ACGTTTA----C-------------------T-----T-CTGTTATTATACCCTTTACTCGT----------AGAGT-AAACGGGTATACTAGATTCGTCGAAAA-------GTATGTAACAGGAAGAAGGATGAGTTTCCGACTATATGAAGAATATAAATTCTTGATCAA----------------------GATCAATAGCGGAGTCGAACTGAACATGTACCCCTGTCCGTATCCGA----A----TCCGTCC----------------GTATASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................................................................................................................................................................................................................................................................AAAA-------GTATGTAACAGGAAGA......................................................................................................................................................2050.2010010
droYak3
ACCTACA-----------------------------------AAGTTA-----------------------------------------------------------------------------------------AC------------------------C---AGTCCTCGTTTGTTTCGT-TTTGAGATGCGT------------A------T----------------GCCATTCA-----T-TTCTTTTTATACCCGTTACTCGT----------AGAGT-AAAAGGGTATACTAGATTCGTTGAAAA-------GTATGTAACAGGCAGAAGGAAGCGTTTCCGACCATATAAAGTATATATATTCTTGATCAG----------------------GATCAGTAGCCGAGTCGATCTGGCCATGTCCGTCTGTCCGTCCGTCT----G----TCCGTCC----------------GTATGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................................................................................................................................................................................................................................................................................................GCAGAAGGAAGCGTTTCCGACCATA..................................................................................................................................25204.2084084000000000
......................................................................................................................................................................................................................................................................................................................................................................................TTGATCAG----------------------GATCAGTAGCCG........................................................................20201.9539000000000039
..................................................................................................................................................................................................................................................................................................................................................................................................................................TCGATCTGGCCATGTCCGTCTGTCC.............................................25200.7014014000000000
.........................................................................................................................................................................................................................................................................................................................................................................................ATCAG----------------------GATCAGTAGCCGAGTCGATC................................................................25200.6513000000000013
.................................................................................................................................................................................................................................................................................................................TCGTTGAAAA-------GTATGTAACAGGCAGA......................................................................................................................................................26200.5010001000000000
................................................................................................................................................................................................................................................................................................AAAAGGGTATACTAGATTCGTTGAAA..............................................................................................................................................................................26200.45900000090000
...............................................................................................................................................................................................................................................TCA-----T-TTCTTTTTATACCCGTTA.............................................................................................................................................................................................................................2230.33101000000000
....................................................................................................................................................................................................................................................................................................................TTGAAAA-------GTATGTAACAGGCAGAAGGA..................................................................................................................................................27200.25500000000005
...TACA-----------------------------------AAGTTA-----------------------------------------------------------------------------------------AC------------------------C---AGTCCTCGTTTGT....................................................................................................................................................................................................................................................................................................................2650.20101000000000
.........................................................................................................................................................................TCCTCGTTTGTTTCGT-TTTGAGATGCG...................................................................................................................................................................................................................................................................................................27200.15311100000000
...........................................................................................................................................................................................................................................................CTTTTTATACCCGTTACTCGT----------AGAG..........................................................................................................................................................................................................25200.15302100000000
...................................................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAG----------------------GATCAGTAGCCGAGT.....................................................................26200.10200020000000
...................................................................................................................................................................................................................................................................................................................................................................................TTCTTGATCAG----------------------GATCAGTAGCCGAGTC....................................................................27200.10200010100000
............................................................................................................................................................................................................................................................................................................................................................................................................................GCCGAGTCGATCTGGCCATGT.......................................................21200.10202000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................GTAGCCGAGTCGATCTGGCCAT.........................................................22200.10220000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................CGAGTCGATCTGGCCATGTCCGTCTGT...............................................27200.05100100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCCGTCTGTCCGTCCGTCT----G----TCCG........................27200.05100100000000
.......................................................................................................................................................................................................................................................................................................................................................................................TGATCAG----------------------GATCAGTAGCCGA.......................................................................20200.05101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................GATCAGTAGCCGAGTCGATCTGGC............................................................24200.05100100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCTGTCCGTCCGTCT----G----TCCGTCC----------------.....25200.05100100000000
..........................................................................................................................................................................................................................................................TCTTTTTATACCCGTTACTCGT----------AGA...........................................................................................................................................................................................................25200.05100100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGTCCGTCT----G----TCCGTCC----------------GTATG24200.05101000000000
.......................................................................................................................................................................................................................................................T-TTCTTTTTATACCCGTTACTCGT----------AGAGT-........................................................................................................................................................................................................29200.05110000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GAGTCGATCTGGCCATGTCCGTC..................................................23200.05100100000000
........................................................................................................................................................................................................................................................................................................ATACTAGATTCGTTGAAAA-------G.....................................................................................................................................................................20200.05100100000000
.........................................................................................................................................................................................................................................................................................................................................ACAGGCAGAAGGAAGCGTTTC..........................................................................................................................................21200.05101000000000
........................................................................................................................................................................................................................................................................................................................................AACAGGCAGAAGGAAGCGTTT...........................................................................................................................................21200.05101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................CAGTAGCCGAGTCGATCTGGCCATG........................................................25200.05100010000000
..................................................................................................................................................................................................................................................................................................AAGGGTATACTAGATTCGTTGAAAA-------G.....................................................................................................................................................................26200.05101000000000
droEre2
AGAC--G------------CAGT---TA--GT-G-------------------------------------CTCAAAGAAAATTAATAA----------------------------------------------------------------TAATAACTACAAATAA-------G--------TAA---------------------T----------GAAATGCATT----------TT-----GAACATTTTTATACCCGTTACTCGT----------AGGGT-AAAAGGGTATACTAGATTCGTTGAAAA-------AATTGTAACAGGTAGAAGGAAGCGTTTCTGACCATATAAAGTATATATATTATTGATATATTATTGATAATTGATATATATTATTGAATAGCCGAGTCGAACTGGCCATGTCCGTCTGTCCG----------------------------------------TATGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................GTTTCTGACCATATAAAGT............................................................................................................................19120.0810000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCCATGTCCGTCTGTCCG----------------------------------------T...21200.0511000000
...........................................................................................................................................................................................................................................................ATTTTTATACCCGTTACTCGT----------..............................................................................................................................................................................................................21200.0510000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................AGCCGAGTCGAACTGGCCATGTCCGTCT.................................................28200.0510000010
......................................................................................................................................................................................................................................................................................................GTATACTAGATTCGTTGAAA..............................................................................................................................................................................20200.0510000100

Generated: 05/18/2015 at 01:40 AM