ID:

dmo_1931

 Coordinate:

scaffold_6540:13577977-13578102 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.4 -11.7 -11.6

Flybase annnotation

CDS [Dmoj\GI24532-cds]; exon [dmoj_GLEANR_9671:5]; CDS [Dmoj\GI24532-cds]; exon [dmoj_GLEANR_9671:6]; intron [Dmoj\GI24532-in]

Repeatable elements

NameClassFamilyStrand
(CAG)nSimple_repeatSimple_repeat+
Gypsy8-I_Dpse-intLTRGypsy+
TART_DVLINEJockey+

Sense Strand Reads

##################################################------------------------------------------------------------------------------------------------------------------------------##################################################
CAGCAGCAACAGCAGCAACAGCAACAACAACAGCAACAGTATCAGCAGCAGTCACAGCAACAACAACAACAACAGCAGCAGCATCATCCGCAGCCAAAGCAGCAGCAAACGAGTCACCTGAATGTGAAACATACGTCACAATTTCAGCGGCAGCAGCTGTCAAATGAGCTGAAGAGCAAGCAGGCAGCGGTGCAGCAGCAGACGGGCACCACGTGCGGCGCACCAC
***********************************************************..........................................................(((..(((((........)))))....))).****************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 M060
embryo
 V049
head
 V056
head
............................................................................................................................................ATTTCAGCAGCAGCAGCTAT.................................................................. 20 2 20 4.15 83 67 12 0 2 2
...........................................................ACAACAACAACAACAGCAGCAGCATCATC.......................................................................................................................................... 29 0 1 2.00 2 2 0 0 0 0
............................................................................................................................................ATTTCAGCAGCAGCAGCTATGA................................................................ 22 3 20 1.40 28 25 1 0 1 1
............................................................................................................................................ATTTCAGCGGCAGCAGCTAT.................................................................. 20 1 1 1.00 1 1 0 0 0 0
............................................................................................................................TGAAACATACGTCACAATTTCAGC.............................................................................. 24 0 1 1.00 1 0 1 0 0 0
.........................................................................................................................................................................................AGCGGTGCAGCAGCAGACGGGCACCA............... 26 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................................GCAGACGGGCACCACGTGCGGCGCAC... 26 0 1 1.00 1 1 0 0 0 0
....................................................................................................AGCAGCAAACGAGTCACCTGAATGTG.................................................................................................... 26 0 1 1.00 1 0 0 1 0 0
..........................................................................................................AAACGAGTCACCTGAATGTG.................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
..................................................................................ATCATCCGCAGCCAAAGCAGCA.......................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................GTCAAATGAGCTGAAGAGCAAGCAGGC......................................... 27 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................ATCAGGCAGCGGTCCAGCGGCA.......................... 22 3 3 0.33 1 0 1 0 0 0
...........................................................................................................................................TATTTCAGCGGCAGCAGCTAT.................................................................. 21 2 4 0.25 1 1 0 0 0 0
.................................................................ACAACAACAGCAGCAGCATCAT........................................................................................................................................... 22 0 4 0.25 1 1 0 0 0 0
............................................................................................................................................ATTTCAGCAGCAGCAGCT.................................................................... 18 1 17 0.18 3 1 2 0 0 0
............................................................................ATCAGCATCATCCGCAGC.................................................................................................................................... 18 1 18 0.06 1 0 0 1 0 0
..GCAGCAACAGCAGCAACAGCAACAAC...................................................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0
.AGCAGCAACAGCAGCAACAGCAACAACA..................................................................................................................................................................................................... 28 0 20 0.05 1 0 0 1 0 0
........................................................GCAACAACAACAACAACAGCAGCA.................................................................................................................................................. 24 0 20 0.05 1 1 0 0 0 0

Anti-sense strand reads

GTCGTCGTTGTCGTCGTTGTCGTTGTTGTTGTCGTTGTCATAGTCGTCGTCAGTGTCGTTGTTGTTGTTGTTGTCGTCGTCGTAGTAGGCGTCGGTTTCGTCGTCGTTTGCTCAGTGGACTTACACTTTGTATGCAGTGTTAAAGTCGCCGTCGTCGACAGTTTACTCGACTTCTCGTTCGTCCGTCGCCACGTCGTCGTCTGCCCGTGGTGCACGCCGCGTGGTG
******************************************************************************..........................................................(((..(((((........)))))....))).*********************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6540:13577927-13578152 + dmo_1931 CAGCAGCAACAGCAGCAACAGC---------------------AACAACAACAGCAACA-GTAT---CAGCAGCAGTCACAGCAACAACAACAAC------AACAGCAGCA------GC---ATCAT----CCG--------CAGCC---------AAAG------------------------------------CAGCAGC------------AAACGAGTCACCT----------------GAATG-------------TGAA------ACA--------------------------------------------------------------------------------TACGTCACAATTTCAGCGGCA---------------------------------------GCAGCTGTCAAATGAGCTGAAGAGCAA----------------------------GCAG---------GCAGCG---GTGCA---------------------------GCAGC---AGA-----CGGGCACCA--CGTGC------GGCGCACCA---C
droVir3 scaffold_12970:11063604-11063812 - -AGCAGCAGCAGCAGCAGCAGC---------------------AACAGCAACAGCAACA-GCAG---CAGCAGCAGCAACAACAACA------------------------------------TCAACTAC---AACAGCAG---CAGCA------GCAGCA-------------------GCAT-----------TTAAA------G-----GCAAAGG----------------------------------------------------------------------------------ACAGAACGCCAGCTAACAGCTTCAGCTT----GTCCTGCACAGAGCTCGTGGAACAGCA-----A---GCA---GCAGCG---GCGAC------G------------------GCAA----------------------------------------CAA------------------------CAG---CAG------------------------------------CAGCAGTAGCAGCAGCA--------------------GCA----
droGri2 scaffold_14828:10981-11211 - CAGCAGCAGCAGCAGCAGCAGC---------------------AGCAGCAGCAGCAGCA-GCAG---CAGCAGCAGCAGCAGCAGCAGCAGCAGC------AGCAGCAGCA------GC------------------------------AGCAGCAGCAGCA---------------------------------------------GCAGCAGCAGCAGCA---GCAG---C--AG------CAGCAGCAGCAGCAGCAGCAGCA------GCA--------------------------------------------------------------------------------GCAGCAGCAGCAGCAGCAGCA---------GCAGC------AGC-------------------------------------------------------AGCAGCAGCAGCAGCAGCAGCAGCAG---CAGCAGCAGCAG------------------------------------CAGCAGCAGCAGCAGCA--------------------GCA---G
droWil2 scf2_1100000003625:595-807 + CAACAGCAACAGCAGCAACAAT---------------------TGCAGCAACAACAGCA-ACAG---CAGCAACAATGGCAGCAACAACAACAGC------AACAACAACT------GC---------------AGCAG---C------A------ACAACA---------------------------------------------ACAGCAGCAACAACAACAGCAG--------------------------------CAGCA------ACA--------------------------------------------------------------------------------ACAGCATCAGCAACAGCAACA---------GCAGC------AAC-------------------------------------------------------GAATGCAACAGCAACAGCAACAGCAA---CAGCAACAGCAG------------------------------------CAACAATTGCAGCAACA--------------------ACA---G
dp5 XR_group6:12702055-12702264 + CAGCAGCAACAGCAGCAACAGC---------------------AGCAGCAACAGCAGCA-GCAG---CAACAGCAACAACAGCAGCAGCAACAGC------AGCAGCAACA------GC---------------AG---------------CAGCAACAGCA---------------------------------------------GCA---GCAACAGCAGCAGCAG--------------------------------CATCA------GCA--------------------------------------------------------------------------------ACATCAGCAGCAAAAGCATCA---------GCAAC------AGC-------------------------------------------------------AGCAGCAGCAGCAGCATAAGCAGCAG---CAACAGCATCAG------------------------------------CAACAACAACAGCTGCA--------------------GCA---A
droPer2 scaffold_14:2089012-2089227 + CAGCAACAGCAGCAGCAGCAGC---------------------AACAGCAACAGCAGCA-GCAG---CCACAAAAGCAACAGCAGCAGCAACAGC------AGCAGCAGCA------GG---TGC---------AGCAG---C------T------ACAAAA---------------------------------------------GCAGCAGCAACAGCACCAGCAG--------------------------------CACGA------GCA--------------------------------------------------------------------------------TCAGCAACAGCGTCAGCAACA---------GCAGC------AGC-------------------------------------------------------ATCAGCAACAGCATCAGCAGCATCAG---CAACAGCATCAG------------------------------------CAACAGCAGCAGCAGCA--------------------GCA---G
droAna3 scaffold_12916:5319795-5320009 + CAGCAGCAGCAGCAGCAGCAGC---------------------AACAACAGCCGCATCA-GCAG---CAGCAACATCCACAGCAGCAGCAGCTACTACTACAGCAACA---------------ACAT----CCA--------CAGCA---------ACTGCAG---CAG---------------------------------C------------ATCAACAACATCT----------------------------------------------------------GACAGTCAT-----GGATA-ATCACCA------------------------------------------------ACA------GCA---AC---A---TC---------------------------AGCCG---------------C-------------------ATATCCATCAGCAACAGCAA------------------CAGCA------------------------------GC---------AGCAGCAGCAACAATTGC------CACCCACGCCGCA
droBip1 scf7180000395567:7196-7399 - CAGCAACATCAGCTGCAACAGC---------------------ACCAGCAACAGTTACA-ACAC---CAGCAGCAGCAGCAA---CA------GC------AACA------------------GCACCTGC---ACCAGCAA---------------------------CAGCTTCA-GCCGCAC-----------CAGCA------------GCAAATGCAACACCA-------------------------------------------------------------------------------------------------------------------------------------CCAGCA---GCA---AC---AACAGCAG------------CAGCAACAGC-------------------------------------------ACCAGCAGCTGCTGCACGAGTCCCAG---C---------AGCA---------------------------ACAGCAGCAGCAGTACCACCCAC--------------------ATCA---C
droKik1 scf7180000302388:1739558-1739794 + AAAAAGCAGCAGCAGCAACAGC---------------------AACAGCTAGAGCAGCA-GTTG---CAGCTGCAGCAGCAGCAGATGCTACAAA------AGCAGCAGCA------GC------------------------------AACAGCAGCAGCA---------------------------------------------GCAGTCCCAAAGCCA---GACG---C--AGGCTCCTCAAACGCCGCAGCAAAAGGAGAA------GCA--------------------------------------------------------------------------------GCTGCAACAGCAAATGCAGCA---------GCACC------TGC-------------------------------------------------------AGCTGCAGCAGCTCCAGCAGATGCAG---TTCCAGCAGCAG------------------------------------CACTTCCTGCGCCAGCA--------------------GCA---C
droFic1 scf7180000453215:585315-585534 + CAGCAGCAGCAGCAGCAGCAAC---------------------ATCAGCATCAGCAGCA-ACAT---CAGCAGCAACAGCAGCAACACCACCAGC------AGCAGCAACA------GCAACACCA------------------------------CCAGCAGCAGCAGCAGCAA---------------------------C------------AACCG-----------------------------------------------------CA-----CCGACA----------------------------------GCATCAGTTCCTGGATCCAGC-----------------GC------A---GCA---GCAACA---GCAAC------------------------AGCAG---------------C-------------------------AA---CAGCA------GCAGCAGACACAG---ACGCA---------------------------ACAGC---------AGCAGCCGCAACAGGCGG----------CCACA---C
droEle1 scf7180000491267:84442-84669 - TAGCCTCAACAGCATTGGCCTCAGCAGCATTGGCCGCAGCAGCATCAGCAGCAGCAACA-TCAG---CCGCAGCAGCATCAGCA---------GC------AGCAACATCA---------------GCCGC---AG------C------A------GCATCA---------------------------------------------GCAGCAGCAACATCAGCCGCAG--------------------------------CAGCATAAGCCGCA-----GCAGCA---------------------------------------------------------------------------TCAGCAGCAGCA---------------AC------ATCAGCCGC---------AGCAG---------------C-------------------------AT---TAGCCGCAGCAGCAT---TAGCCGCAGCAG------------------------------------CATCAGCCGCAGCAGCA--------------------GCG---A
droRho1 scf7180000777041:7267-7496 - CAGCAGCAACAACAGCAGCAGC---------------------AACAGCAGCAACAACA-GCAG---CAACAGCAGCAGCAACAACA------GC------AGCAACAACA------G------------------------CAGCAGCA------GCAGCA---------------------------------------------ACA---CCAACAACCACAGCAAC-ACTTGA----------------------AGTACCA------GCA--------------------------------------------------------------------------------ACTGCAATATCAAATGCAGCA---------GCAATATGAATACCAGCAGC---------AGCAG---------------C-------------------------AC---TACCA------GCAGCAGTTCCAGCAGCAA------------------------------CAGC---------AACAGCAGCAACATCTGA------CACCCACGG---C
droBia1 scf7180000301760:2681324-2681538 - CATCAACAACAGCAGCAATTTC---------------------AGCAGCAGCAACAGCA-ACAG---AAGCAGCAGCAACAGCAACAGAAGGAACAACATCAGCAAC------------------CC----AAT--------CAACAGCA---GCAACAGCA---------------------------------------------GCA---GGAACTGCAACAGCAA--------------------------------ATGCA------GCA--------------------------------------------------------------------------------A---------------------T---TTCAGCAG------------CAGGAACAGCAACAGAAG---------------C-------------------AAGAGCAACAGAAGCAAGAG------------------CAGCA---------------------------TCAGC---------AACAGCAGCA---ACTGA------AACACAGCC---A
droTak1 scf7180000415345:325252-325490 + GAGCCGCAGCAGCAGCAGCAGC---------------------AGCAACAACAGCAACA-GCAG---CAGCAGCCGCCGCAGCAGCAGCAACAGT----TCAGCTACCACA------G------------------------CAACAGCA------GCAATA---------------------------------------------ACA---ACTACTACCACAGCAA--------------------------------TGCCA------GCAAGCAGGCAGCAGCAGCACACGCCAGCAACA-TGTACCA------------------------------------------------ACA------GCAGCA---------GC---------------------------AGCAA---------------C-------------------ATCAGCAACAGCAGCAACATCTGC---------------AG---------------------------------C---AGCAGCAACAGCAACA------GCAAACAGCACACATCA---C
droEug1 scf7180000409711:1690733-1690957 - CAGCACCATCAGCAGCAACAAC---------------------ACCAACAGCAGCAGCA-GCAA---CTCCAGCAGTTCCAGCCGCAGCCAGTGC------TGCCGCAAAT------GC---------------AG---------------AATGTTCGGGC---------------------------------------------GTATCCCTATCAGCC---A-AC-TAC--GAGTAACATGAACG-------------CCTA------CTA--------------------------------------------------------------------------------TCTGCACAACTTGCAGCATCA---------GCAGC------AGA-------------------------------------------------------GATTGCAGTTCCAACAGCAGCATCAG---CAGCAGCAACAT------------------------------------CAACCGCTGCAGCAGCA--------------------ACA---A
dm3 chrX:3749797-3749996 + CAGCAACAACAGCAGCAGCAGC---------------------AACAACAGCAGCAGCA-ACAA---CAGCAGCAGCAGCAACAACA------GC------AGCAACAACAGCAGCAGC------------------------------A------ACAGCA---------------------------------------------GCA---GCAGCAGCAACACCAG--------------------------------GAGTT------GTA-----CCGCCA---------------------------------------------------------------------------GC---A---GCA---GCTACA---TC----------------------G---CACTAG------TATGAGCGGCATAGCCA----------------------------------GC--------------CAG---------------------------------C---AACACTTGCAGCA------ATTGGATGCACAGTACACCA---C
droSim2 x:11964630-11964833 - CACCACCAACAGCAGCAGCAGC---------------------AACAGCAGCAGCAGCA-GCAA---CAGCAGCAACAGCAG---CAGCAACAGAAAC---AGCAGCAACA------------TCAT----ATG--------CAGCAGCA------GCAG------CAG---------------------------------CAGCAAC------AACCTTTGTCACCA--------------------------------CCTCA------CCC------------------------------------AC------------------------------------------------CCGGCA---GCA---GC---AACAGCAGT------------------------A----------------------------------------G-TGCAGCAGCGGCAGCAG------------------CAGCA------------------------------GC---GGCAGCGGCAGCGGCG------GC------CG---TCAA---C
droSec2 scaffold_13:716495-716713 - CAGCAGCAGCAGCAGCAACATC---------------------CCCACCAGCAGCAGCA-GCAT---ATGCAGCATGTCCTGCAACTGCAGCAGCAACAGCAACA------------------ACACCTTC---AGCAGCAG---------------------------CAGCAT---------------------------C------------ACTTGCA----------------------------------------------------------GCACCAGATGCATAC-----GCATC-ATAACTT------------------------------------------------CCA------GCA---G---------------------------------------------------------CATGAAACGCCGGCAACAGTGT-CGCAG---CAGCAGCACATGCAA---CAGCAGCAGGCG------------------------------------CAGACGACACAGCAGCA--------------------ACA---T
droYak3 3R:16623267-16623501 + CAGCAGCAGCAGCAGCACCAGC---------------------AACAACACCACCCACACACGGCAGCAGCAGCAGCAACGGCAACA------------------------------------CCACC-GC---AACAGCAA---------------------------CAGCAGCAAGCTGCGCCTTCGGTTTTGCAACAGC------------ATTT----------------GGGTCACCTGAATT-----ACG-AAAGTGGA------GCA--------------------------------------------------------------------------------ACTGCAGCAGCA------------------------------------------------GCAG----------------------------------------CAA------CAGCAG------------------CGGCTGCAGCAGCAGCAACCAGTAGAAGTGGCTCGGCAACACT-GGCGCAGCA------TTTGG----------CAACA---C
droEre2 scaffold_4820:7090253-7090447 - CAGCCGCATCAGCACCAACATC---------------------AGCAGCATCAGCAGCA-GCAT---CAGCAGCAGCAGCATCAGCAGCATCAGC------AGCAGCATCA------GC------------------------------AGCAGCATCAGCA---------------------------------------------GCA---GCATCAGCAACACCAG--------------------------------------------CA--------------------------------------------------------------------------------A---------------------C---ATCTGCAC------------CAGCAGCAGCAACAGGCC------AACTTTCTCCACATCCA----------------------------GCAG------------------TCG------------------------------CTGCAGCACAACCACCAACTGA--------------------GCCA---C

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
CAGCAGCAACAGCAGCAACAGC---------------------AACAACAACAGCAACA-GTAT---CAGCAGCAGTCACAGCAACAACAACAAC------AACAGCAGCA------GC---ATCAT----CCG--------CAGCC---------AAAG------------------------------------CAGCAGC------------AAACGAGTCACCT----------------GAATG-------------TGAA------ACA--------------------------------------------------------------------------------TACGTCACAATTTCAGCGGCA---------------------------------------GCAGCTGTCAAATGAGCTGAAGAGCAA----------------------------GCAG---------GCAGCG---GTGCA---------------------------GCAGC---AGA-----CGGGCACCA--CGTGC------GGCGCACCA---CSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................................................................ACAACAACAAC------AACAGCAGCA------GC---ATCAT----C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2912.002200000
......................................................................................................................................................................................................................................................................TGAA------ACA--------------------------------------------------------------------------------TACGTCACAATTTCAGC...........................................................................................................................................................................................................2411.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCG---GTGCA---------------------------GCAGC---AGA-----CGGGCACCA--........................2611.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---AGA-----CGGGCACCA--CGTGC------GGCGCAC......2611.001100000
.....................................................................................................................................................................................................AGCAGC------------AAACGAGTCACCT----------------GAATG-------------TG.......................................................................................................................................................................................................................................................................................................................2611.001000010
.......................................................................................................................................................................................................................AAACGAGTCACCT----------------GAATG-------------TG.......................................................................................................................................................................................................................................................................................................................2011.001100000
..........................................................................................................................ATCAT----CCG--------CAGCC---------AAAG------------------------------------CAGCA......................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAAATGAGCTGAAGAGCAA----------------------------GCAG---------GC..........................................................................................2711.001100000
..........................................................................................ACAAC------AACAGCAGCA------GC---ATCAT----............................................................................................................................................................................................................................................................................................................................................................................................................................................................2240.251100000
..GCAGCAACAGCAGCAACAGC---------------------AACAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051100000
.AGCAGCAACAGCAGCAACAGC---------------------AACAACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051000010
.................................................................................GCAACAACAACAAC------AACAGCAGCA------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
droVir3
-AGCAGCAGCAGCAGCAGCAGC---------------------AACAGCAACAGCAACA-GCAG---CAGCAGCAGCAACAACAACA------------------------------------TCAACTAC---AACAGCAG---CAGCA------GCAGCA-------------------GCAT-----------TTAAA------G-----GCAAAGG----------------------------------------------------------------------------------ACAGAACGCCAGCTAACAGCTTCAGCTT----GTCCTGCACAGAGCTCGTGGAACAGCA-----A---GCA---GCAGCG---GCGAC------G------------------GCAA----------------------------------------CAA------------------------CAG---CAG------------------------------------CAGCAGTAGCAGCAGCA--------------------GCA----SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................................................................................AACA------------------------------------TCAACTAC---AACAGCAG---CAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................AAGG----------------------------------------------------------------------------------ACAGAACGCCAGCTAACA...............................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................AACTAC---AACAGCAG---CAGCA------GC.................................................................................................................................................................................................................................................................................................................................................................................................................................21100.202000000000000000001000000000000000000000000000000000000000000010
..........AGCAGCAGCAGC---------------------AACAGCAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.102000000000000000000000000000000000000200000000000000000000000000
..............................................................................................................................ACTAC---AACAGCAG---CAGCA------GC.................................................................................................................................................................................................................................................................................................................................................................................................................................20110.091000000100000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................AA----------------------------------------CAA------------------------CAG---CAG------------------------------------CAGCAGTA....................................19140.071000000000000000000000000100000000000000000000000000000000000000
............................................................................CAACAACAACA------------------------------------TCAACTAC---AACGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000000010000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG------------------------------------CAGCAGTAGCAGCAGCA--------------------GC.....21200.051000100000000000000000000000000000000000000000000000000000000000
.......AGCAGCAGCAGCAGC---------------------AACAGCAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
.....................................................................GCAGCAGCAACAACAACA------------------------------------TC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000100000000000000000000000000000000000000000000000000000000000
..........AGCAGCAGCAGC---------------------AACAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000000000000000000000000000001000
...........GCAGCAGCAGC---------------------AACAGCAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000001000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---CAG------------------------------------CAGCAGTAGCAGCAGCA--------------------GC.....23200.051001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................TAC---AACAGCAG---CAGCA------GCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
....................GC---------------------AACAGCAACAGCAACA-GCAG---C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
........GCAGCAGCAGCAGC---------------------AACAGCAACAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051001000000000000000000000000000000000000000000000000000000000000
......................................................CAACA-GCAG---CAGCAGCAGCAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000100000000000000000000000000000000000000000000000000000000000
.................................................AACAGCAACA-GCAG---CAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000001000000000000000000000000000000000000000000000000000000000
................................................CAACAGCAACA-GCAG---CAGCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000100000000000000000000000000000000000
..................................................................................................................................C---AACAGCAG---CAGCA------GCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000100000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAG------------------------------------CAGCAGTAGCAGCAGCA--------------------.......20200.051000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA------------------------CAG---CAG------------------------------------CAGCAGTAGCAGC...............................21200.051000000000000000000000000000001000000000000000000000000000000000
...............CAGCAGC---------------------AACAGCAACAGCAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000000000000100000000000000000000000000
................AGCAGC---------------------AACAGCAACAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000010000000000000000000000000000000000000000000000
.................................................AACAGCAACA-GCAG---CAGCAGCAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000001000000000000000000000000000000000000000000000
droGri2
CAGCAGCAGCAGCAGCAGCAGC---------------------AGCAGCAGCAGCAGCA-GCAG---CAGCAGCAGCAGCAGCAGCAGCAGCAGC------AGCAGCAGCA------GC------------------------------AGCAGCAGCAGCA---------------------------------------------GCAGCAGCAGCAGCA---GCAG---C--AG------CAGCAGCAGCAGCAGCAGCAGCA------GCA--------------------------------------------------------------------------------GCAGCAGCAGCAGCAGCAGCA---------GCAGC------AGC-------------------------------------------------------AGCAGCAGCAGCAGCAGCAGCAGCAG---CAGCAGCAGCAG------------------------------------CAGCAGCAGCAGCAGCA--------------------GCA---GSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
CAACAGCAACAGCAGCAACAAT---------------------TGCAGCAACAACAGCA-ACAG---CAGCAACAATGGCAGCAACAACAACAGC------AACAACAACT------GC---------------AGCAG---C------A------ACAACA---------------------------------------------ACAGCAGCAACAACAACAGCAG--------------------------------CAGCA------ACA--------------------------------------------------------------------------------ACAGCATCAGCAACAGCAACA---------GCAGC------AAC-------------------------------------------------------GAATGCAACAGCAACAGCAACAGCAA---CAGCAACAGCAG------------------------------------CAACAATTGCAGCAACA--------------------ACA---GSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................................................................AACAATGGCAGCAACAACAACAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.7014014000
.................................................AACAACAGCA-ACAG---CAGCAACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.25505000
...................................................................................AACAACAACAGC------AACAACAACT------G.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.20404000
......................................................................................................................................AGCAG---C------A------ACAACA---------------------------------------------ACAGCA..........................................................................................................................................................................................................................................................................................................................................................................19200.20400040
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACAGCAA---CAGCAACA....................................................................................22200.20401003
...............................................................................................................................................................ACA---------------------------------------------ACAGCAGCAACAACA.................................................................................................................................................................................................................................................................................................................................................................18200.15300030
..............................................AGCAACAACAGCA-ACAG---CAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.15302010
................AACAAT---------------------TGCAGCAACAACAGCA-...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.15301020
..............................................................................................................................................C------A------ACAACA---------------------------------------------ACAGCAGCAAC.....................................................................................................................................................................................................................................................................................................................................................................19200.15300030
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACAGCAACAGCAA---CA..........................................................................................22200.15300030
..............................................................................................................................................C------A------ACAACA---------------------------------------------ACAGCAGCAACA....................................................................................................................................................................................................................................................................................................................................................................20200.15300030
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAACAGCAACAGCAA---CA..........................................................................................21200.15300030
.......................................................................AACAATGGCAGCAACAACAACAGC------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.15302010
.....................................................................................................................................................................................................................................................................................................................................................................................................C------AAC-------------------------------------------------------GAATGCAACAGCAACAGCAAC....................................................................................................2580.13101000
.........................................................................................................................................................................................................................................................................................................................................................................TCAGCAACAGCAACA---------GCAGC------AAC-------------------------------------------------------GAA......................................................................................................................2690.11100010
......................................................................................................................................................................................................................CAACAACAACAGCAG--------------------------------CAGCA------AC.............................................................................................................................................................................................................................................................................................................22200.10200020
....................................................AACAGCA-ACAG---CAGCAACAATGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.10202000
....................................................AACAGCA-ACAG---CAGCAACAATGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.10202000
................................................................................AGCAACAACAACAGC------AACAACAACT------G.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.10202000
.................................................AACAACAGCA-ACAG---CAGCAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.10200020
...........................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAACA---------GCAGC------AAC-------------------------------------------------------G........................................................................................................................22110.09100010
.................................................................................................................................................................................................................................................................................CA--------------------------------------------------------------------------------ACAGCATCAGCAACAGCAACA---------GCAG..........................................................................................................................................................................................27120.08100010
............................................................................................................................................................................................................................CAACAGCAG--------------------------------CAGCA------ACA--------------------------------------------------------------------------------ACAGCATCAG..................................................................................................................................................................................................................27120.08100010
........................................................................................................................................................................................................................................................................CA------ACA--------------------------------------------------------------------------------ACAGCATCAGCAACAGCAACA---------G.............................................................................................................................................................................................27120.08101000
........................................................................................................................................................................................................................................................................CA------ACA--------------------------------------------------------------------------------ACAGCATCAGCAACAGC...........................................................................................................................................................................................................22140.07100010
..............................................................................................................T------GC---------------AGCAG---C------A------ACAACA---------------------------------------------ACAGCAGCAACA....................................................................................................................................................................................................................................................................................................................................................................28140.07100010
........................................................................................................AACAACT------GC---------------AGCAG---C------A------ACAACA---------------------------------------------ACA.............................................................................................................................................................................................................................................................................................................................................................................25150.07101000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAA---CAGCAACAGCAG------------------------------------CAACAATT....................................25160.06100010
.................................................................................................................................................................................................................................................................................CA--------------------------------------------------------------------------------ACAGCATCAGCAACAGC...........................................................................................................................................................................................................19170.06100010
.....................................................................................................................................................................................................................................................................................................................................................................AGCATCAGCAACAGCAACA---------GCAG..........................................................................................................................................................................................23170.06101000
........................................................................................................................................................................................................................................................................................................................................................................ATCAGCAACAGCAACA---------GCAGC------AAC-------------------------------------------------------.........................................................................................................................24190.05101000
.................................................................................................................................................................................................................AGCAGCAACAACAACAGCAG--------------------------------CAGCA------A..............................................................................................................................................................................................................................................................................................................26200.05101000
................AACAAT---------------------TGCAGCAACAACAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
............................................................................................AGC------AACAACAACT------GC---------------AGCAG---C------A------A..................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
............................................................................TGGCAGCAACAACAACAGC------AACAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
.....................................................................................CAACAACAGC------AACAACAACT------GC---------------AGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
....................................................................................................................................................................................................................AGCAACAACAACAGCAG--------------------------------CAGCA------ACA--------------------------------------------------------------------------------............................................................................................................................................................................................................................25200.05100010
..........................................................................AATGGCAGCAACAACAACAGC------A.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
................AACAAT---------------------TGCAGCAACAACAGCA-A..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
............................................GCAGCAACAACAGCA-ACAG---CAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
.........................................................................................................................................................................................................................CAACAACAGCAG--------------------------------CAGCA------ACA--------------------------------------------------------------------------------ACAG........................................................................................................................................................................................................................24200.05101000
.........................................................................................................................................AG---C------A------ACAACA---------------------------------------------ACAGCAGCAACAA...................................................................................................................................................................................................................................................................................................................................................................23200.05100010
....AGCAACAGCAGCAACAAT---------------------TG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101000
...............................................................................................................................................................................................................ACAGCAGCAACAACAACAGCAG--------------------------------..........................................................................................................................................................................................................................................................................................................................22200.05101000
........................................................................................CAACAGC------AACAACAACT------GC---------------AG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
................AACAAT---------------------TGCAGCAACAACAGCA-AC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
...........................................................................................................................................................................................................................ACAACAGCAG--------------------------------CAGCA------ACA--------------------------------------------------------------------------------ACA.........................................................................................................................................................................................................................21200.05101000
..................................................ACAACAGCA-ACAG---CAGCAACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100001
......................................................................................AACAACAGC------AACAACAACT------GC---------------AG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
..............................................................................................................................................................AACA---------------------------------------------ACAGCAGCAACAACAAC...............................................................................................................................................................................................................................................................................................................................................................21200.05100010
.......................................................................................................................................................................................................................AACAACAACAGCAG--------------------------------CAGCA------A..............................................................................................................................................................................................................................................................................................................20200.05100100
...................AAT---------------------TGCAGCAACAACAGCA-ACAG---C...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
..................................................................................................................................................................................................................GCAGCAACAACAACAGCAG--------------------------------CAGCA------...............................................................................................................................................................................................................................................................................................................24200.05100010
.............................................................................GGCAGCAACAACAACAGC------AAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAA---CAGCAACAGCAG------------------------------------C...........................................21200.05101000
..........................................................................................ACAGC------AACAACAACT------GC---------------AGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
............................................................................TGGCAGCAACAACAACAGC------AACAACAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05101000
..........................................................................AATGGCAGCAACAACAACAGC------AACA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
.............................................................................GGCAGCAACAACAACAGC------AACAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
......................................................................CAACAATGGCAGCAACAACAACAGC------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
.....................T---------------------TGCAGCAACAACAGCA-ACAG---CAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
.....................................................................................................................................................A------ACAACA---------------------------------------------ACAGCAGCAACAA...................................................................................................................................................................................................................................................................................................................................................................20200.05100010
.....................................................................................................AACAACAACT------GC---------------AGCAG---C------A------ACA................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAA---CAGCAACAGCAG------------------------------------CA..........................................21200.05101000
............................................GCAGCAACAACAGCA-ACAG---CAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
..............................................................................................................................................C------A------ACAACA---------------------------------------------ACAGCAGCAACAACAACA..............................................................................................................................................................................................................................................................................................................................................................26200.05100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAACAGCAACAGCAA---C...........................................................................................22200.05100001
......................................................................CAACAATGGCAGCAACAACAACAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
.....................T---------------------TGCAGCAACAACAGCA-ACAG---CAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
.....................................................................................................................................................................................................................GCAACAACAACAGCAG--------------------------------CAGCA------ACA--------------------------------------------------------------------------------............................................................................................................................................................................................................................24200.05100010
.....................................................................................................................................................A------ACAACA---------------------------------------------ACAGCAGCAACAACAACAG.............................................................................................................................................................................................................................................................................................................................................................26200.05100010
.....................................................................................................................................................................................................................GCAACAACAACAGCAG--------------------------------CAGCA------...............................................................................................................................................................................................................................................................................................................21200.05101000
..............................................................AG---CAGCAACAATGGCAGCAACAACA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
........................................................................ACAATGGCAGCAACAACAACAGC------A.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
..............................................AGCAACAACAGCA-ACAG---CAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
...........................................TGCAGCAACAACAGCA-ACAG---CAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
...................................................CAACAGCA-ACAG---CAGCAACAATGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
........................................................................................................................................................................................................................................................................................................................................................................ATCAGCAACAGCAACA---------GCAGC------...................................................................................................................................................................................21200.05101000
.........................................................................................AACAGC------AACAACAACT------GC---------------AGCAG---C------..........................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAACAGCAACAGCAACAGC.................................................................................................21200.05101000
.......................................................AGCA-ACAG---CAGCAACAATGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101000
......................................................................................................................................................................................................................CAACAACAACAGCAG--------------------------------CAGCA------ACA--------------------------------------------------------------------------------............................................................................................................................................................................................................................23200.05100010
.........................................................................................AACAGC------AACAACAACT------GC---------------AGCAG---C------A------AC.................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
.................................................................................................................................................................A---------------------------------------------ACAGCAGCAACAACAACAGCA...........................................................................................................................................................................................................................................................................................................................................................22200.05100001
..................................................ACAACAGCA-ACAG---CAGCAACAATGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
......................................................................................AACAACAGC------AACAACAACT------GC---------------AGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
................................................................................AGCAACAACAACAGC------AACAACAACT------GC---------------AG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................29200.05101000
............................................................................................AGC------AACAACAACT------GC---------------AGCAG---C------A------ACA................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
.......................................................................AACAATGGCAGCAACAACAACAGC------A.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAG------------------------------------CAACAATTG...................................20200.05101000
.................................................AACAACAGCA-ACAG---CAGCAACAATGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05101000
...............CAACAAT---------------------TGCAGCAACAACAGCA-A..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
.............................................................................................................................................................................................................................AACAGCAG--------------------------------CAGCA------ACA--------------------------------------------------------------------------------ACAGCA......................................................................................................................................................................................................................22200.05101000
........................................................................ACAATGGCAGCAACAACAACAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
.............................................................................................................................................................CAACA---------------------------------------------ACAGCAGCAACAACAACA..............................................................................................................................................................................................................................................................................................................................................................23200.05100001
dp5
CAGCAGCAACAGCAGCAACAGC---------------------AGCAGCAACAGCAGCA-GCAG---CAACAGCAACAACAGCAGCAGCAACAGC------AGCAGCAACA------GC---------------AG---------------CAGCAACAGCA---------------------------------------------GCA---GCAACAGCAGCAGCAG--------------------------------CATCA------GCA--------------------------------------------------------------------------------ACATCAGCAGCAAAAGCATCA---------GCAAC------AGC-------------------------------------------------------AGCAGCAGCAGCAGCATAAGCAGCAG---CAACAGCATCAG------------------------------------CAACAACAACAGCTGCA--------------------GCA---ASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAGCTGCA--------------------GCA---.2030.3310100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAG------------------------------------CAACAACAACAGC...............................1960.1710010000000
..........................................................................AACAACAGCAGCAGCAACAGC------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020200000000
......................................................................................................................................................................................................................CAACAGCAGCAGCAG--------------------------------CATCA------GCA--------------------------------------------------------------------------------............................................................................................................................................................................................................................23120.0810100000000
...........GCAGCAACAGC---------------------AGCAGCAACAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510010000000
.................................................................................................................................................................................................................................................................................................................................................................................AGCATCA---------GCAAC------AGC-------------------------------------------------------AGCAGT...................................................................................................................21200.0510000100000
......................................................................................................GCAGCAACA------GC---------------AG---------------CAGCAACAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510010000000
.......................................................................................................................................................CAGCAACAGCA---------------------------------------------GCA---GCAACAGCAGCA..............................................................................................................................................................................................................................................................................................................................................................26200.0510001000000
..................................................................................................................................................................................................................................................................................................................................................................................................CAAC------AGC-------------------------------------------------------AGCAGCAGCAGCA............................................................................................................20200.0510000100000
..............................................................AG---CAACAGCAACAACAGCAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
......................................................................................AGCAACAGC------AGCAGCAACA------GC---------------AG---------------CAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510000000001
...........................................................................................................................................................AACAGCA---------------------------------------------GCA---GCAACAGCAGCA..............................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
...............................................................................................................................................................................................................GCA---GCAACAGCAGCAGCAG--------------------------------CA........................................................................................................................................................................................................................................................................................................................21200.0510000100000
......................................................................................................................................................................................................................CAACAGCAGCAGCAG--------------------------------CATCA------...............................................................................................................................................................................................................................................................................................................20200.0510000001000
.........................................................................................AACAGC------AGCAGCAACA------GC---------------AG---------------CA......................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
..........AGCAGCAACAGC---------------------AGCAGCAACAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510010000000
...................................................................................................................................................................................................................................................................................................................................................................................................AAC------AGC-------------------------------------------------------AGCAGCAGCAGCAGCA.........................................................................................................22200.0510000100000
.........................................................................CAACAACAGCAGCAGCAACAGC------AG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510100000000
......................................................................................AGCAACAGC------AGCAGCAACA------GC---------------AG---------------C.......................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000001
.............AGCAACAGC---------------------AGCAGCAACAGCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000001
......................................................................................................GCAGCAACA------GC---------------AG---------------CAGCAACAGCA---------------------------------------------GCA---..........................................................................................................................................................................................................................................................................................................................................................................27200.0510100000000
.....................................................................ACAGCAACAACAGCAGCAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
....................................................................................GCAGCAACAGC------AGCAGCAACA------GC---------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510010000000
...................................................................................................................................................................................................................................................................................................................................................................................................AAC------AGC-------------------------------------------------------AGCAGCAGCAGCAG...........................................................................................................20200.0510000100000
............................................................GCAG---CAACAGCAACAACAGCAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000100000
..............GCAACAGC---------------------AGCAGCAACAGCAGCA-GC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000001
...................................................CAGCAGCA-GCAG---CAACAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000100000
........................................................................................................AGCAACA------GC---------------AG---------------CAGCAACAGCA---------------------------------------------GCA---GC........................................................................................................................................................................................................................................................................................................................................................................27200.0510000000001
CAGCAGCAACAGCAGCAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000010000
....................................................................................GCAGCAACAGC------AGCAGCAACA------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000100000
.......................................................................................................................................G---------------CAGCAACAGCA---------------------------------------------GCA---GCAACAGC..................................................................................................................................................................................................................................................................................................................................................................23200.0510010000000
CAGCAGCAACAGCAGCAACAGC---------------------A...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
......................................................................................................GCAGCAACA------GC---------------AG---------------CAGCAACA................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000100000
...................................................................................AGCAGCAACAGC------AGCAGCAACA------GC---------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510010000000
................AACAGC---------------------AGCAGCAACAGCAGCA-...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
.................................................................................................................................................................................................................................................................................................................................................................................................GCAAC------AGC-------------------------------------------------------AGCAGCAGCAGCA............................................................................................................21200.0510000100000
...........................................................................................................AACA------GC---------------AG---------------CAGCAACAGCA---------------------------------------------GCA---..........................................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
........................................................................................................................................................AGCAACAGCA---------------------------------------------GCA---GCAACAGCAGC...............................................................................................................................................................................................................................................................................................................................................................24200.0510000000001
....................................................................................GCAGCAACAGC------AGCAGCAACA------GC---------------AG---------------CA......................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510100000000
..........................................................................................ACAGC------AGCAGCAACA------GC---------------AG---------------C.......................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
.......................................................................AGCAACAACAGCAGCAGCAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000100000
............................................GCAGCAACAGCAGCA-GCAG---CA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000100000
.......................................................................................GCAACAGC------AGCAGCAACA------GC---------------AG---------------CAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000001
.......................................................................................................CAGCAACA------GC---------------AG---------------CAGCAACAGCA---------------------------------------------GCA---..........................................................................................................................................................................................................................................................................................................................................................................26200.0510001000000
...........GCAGCAACAGC---------------------AGCAGCAACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000100000
............................................GCAGCAACAGCAGCA-GCAG---CAACAGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510000000001
............CAGCAACAGC---------------------AGCAGCAACAGCAGCA-...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510001000000
........................................................................................................AGCAACA------GC---------------AG---------------CAGCAACAGCA---------------------------------------------GC..............................................................................................................................................................................................................................................................................................................................................................................24200.0510000000001
...........GCAGCAACAGC---------------------AGCAGCAACAGCAGCA-...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510100000000
.....................................................................................................................................................................................................................................................................................................................................................................................TCA---------GCAAC------AGC-------------------------------------------------------AGCAGCAGCAGC.............................................................................................................23200.0510000100000
.............AGCAACAGC---------------------AGCAGCAACAGCAGCA-GC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510000000001
................................................CAACAGCAGCA-GCAG---CAACAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
.........................................................................................................................................................................................................................CAGCAGCAGCAG--------------------------------CATCA------GCA--------------------------------------------------------------------------------............................................................................................................................................................................................................................20200.0510100000000
........................................................................................................................................................AGCAACAGCA---------------------------------------------GCA---GCAACAGCAGCAGC............................................................................................................................................................................................................................................................................................................................................................27200.0510000000001
.....................................................................................CAGCAACAGC------AGCAGCAACA------GC---------------AG---------------CA......................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510001000000
.................ACAGC---------------------AGCAGCAACAGCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
.......................................................AGCA-GCAG---CAACAGCAACAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
...............................................................G---CAACAGCAACAACAGCAGCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000001000
........................................................GCA-GCAG---CAACAGCAACAACAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510000100000
droPer2
CAGCAACAGCAGCAGCAGCAGC---------------------AACAGCAACAGCAGCA-GCAG---CCACAAAAGCAACAGCAGCAGCAACAGC------AGCAGCAGCA------GG---TGC---------AGCAG---C------T------ACAAAA---------------------------------------------GCAGCAGCAACAGCACCAGCAG--------------------------------CACGA------GCA--------------------------------------------------------------------------------TCAGCAACAGCGTCAGCAACA---------GCAGC------AGC-------------------------------------------------------ATCAGCAACAGCATCAGCAGCATCAG---CAACAGCATCAG------------------------------------CAACAGCAGCAGCAGCA--------------------GCA---GSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.............................................................................AACAGCAGCAGCAACAGC------AGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.153003000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAG------------------------------------CAACAGCAGCAGCAGCA--------------------GC.....24140.071001000
.....................................................................................CAGCAACAGC------AGCAGCAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000010
......CAGCAGCAGCAGCAGC---------------------AACAGCAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051010000
.....ACAGCAGCAGCAGCAGC---------------------AACAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051010000
................................................CAACAGCAGCA-GCAG---CCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000010
...................................................................................................................................................................................................................................................................................................................................................................................CAACA---------GCAGC------AGC-------------------------------------------------------ATCAGC...................................................................................................................19200.051010000
droAna3
CAGCAGCAGCAGCAGCAGCAGC---------------------AACAACAGCCGCATCA-GCAG---CAGCAACATCCACAGCAGCAGCAGCTACTACTACAGCAACA---------------ACAT----CCA--------CAGCA---------ACTGCAG---CAG---------------------------------C------------ATCAACAACATCT----------------------------------------------------------GACAGTCAT-----GGATA-ATCACCA------------------------------------------------ACA------GCA---AC---A---TC---------------------------AGCCG---------------C-------------------ATATCCATCAGCAACAGCAA------------------CAGCA------------------------------GC---------AGCAGCAGCAACAATTGC------CACCCACGCCGCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................................................................................................TACAGCAACA---------------ACAT----CCA--------CAGCA---------ACTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................CG---------------C-------------------ATATCCATCAGCAACAGCAA------------------CAGC...............................................................................2711.001010000
.............................................................................................................................................................................................................................................................................................................GATA-ATCACCA------------------------------------------------ACA------GCA---AC---A---TC---------------------------.................................................................................................................................................................2211.001010000
.............................................................................................................................................................................................................................AACATCT----------------------------------------------------------GACAGTCAT-----GGAT...............................................................................................................................................................................................................................................................................2011.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GCCG---------------C-------------------ATATCCATCAGCAAC..........................................................................................................2011.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCAACAGCAA------------------CAGCA------------------------------GC---------AGCAGC...............................2740.251010000
........GCAGCAGCAGCAGC---------------------AACAACAGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2460.171100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAA------------------CAGCA------------------------------GC---------AGCAGCAGCA...........................25200.153000003
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA------------------CAGCA------------------------------GC---------AGCAGCAGC............................18200.102020000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAA------------------CAGCA------------------------------GC---------AGCAGCAGC............................21200.102000002
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCAACAGCAA------------------CAGCA------------------------------GC---------.....................................21150.071010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAA------------------CAGCA------------------------------GC---------AGCAGCAGCA...........................24200.051000001
.......AGCAGCAGCAGCAGC---------------------AACAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000001
......CAGCAGCAGCAGCAGC---------------------AACAACAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA------------------CAGCA------------------------------GC---------AGCAGCAGC............................19200.051000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAA------------------CAGCA------------------------------GC---------AGCAGC...............................22200.051000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAA------------------CAGCA------------------------------GC---------AGCAGC...............................20200.051000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAA------------------CAGCA------------------------------GC---------AGCAGC...............................23200.051000001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAA------------------CAGCA------------------------------GC---------AGCAGCAGCAAC.........................27200.051000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCA------------------------------GC---------AGCAGCAGCAACA........................20200.051100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA------------------CAGCA------------------------------GC---------AGCAGCAGCAACA........................22200.051000001
.AGCAGCAGCAGCAGCAGCAGC---------------------AAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAA------------------CAGCA------------------------------GC---------AGCAGCAGCA...........................22200.051000100
CAGCAGCAGCAGCAGCAGCAGC---------------------AAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051010000
droBip1
CAGCAACATCAGCTGCAACAGC---------------------ACCAGCAACAGTTACA-ACAC---CAGCAGCAGCAGCAA---CA------GC------AACA------------------GCACCTGC---ACCAGCAA---------------------------CAGCTTCA-GCCGCAC-----------CAGCA------------GCAAATGCAACACCA-------------------------------------------------------------------------------------------------------------------------------------CCAGCA---GCA---AC---AACAGCAG------------CAGCAACAGC-------------------------------------------ACCAGCAGCTGCTGCACGAGTCCCAG---C---------AGCA---------------------------ACAGCAGCAGCAGTACCACCCAC--------------------ATCA---CSizeHit CountTotal NormTotal
No Reads
droKik1
AAAAAGCAGCAGCAGCAACAGC---------------------AACAGCTAGAGCAGCA-GTTG---CAGCTGCAGCAGCAGCAGATGCTACAAA------AGCAGCAGCA------GC------------------------------AACAGCAGCAGCA---------------------------------------------GCAGTCCCAAAGCCA---GACG---C--AGGCTCCTCAAACGCCGCAGCAAAAGGAGAA------GCA--------------------------------------------------------------------------------GCTGCAACAGCAAATGCAGCA---------GCACC------TGC-------------------------------------------------------AGCTGCAGCAGCTCCAGCAGATGCAG---TTCCAGCAGCAG------------------------------------CACTTCCTGCGCCAGCA--------------------GCA---CSizeHit CountTotal NormTotal
No Reads
droFic1
CAGCAGCAGCAGCAGCAGCAAC---------------------ATCAGCATCAGCAGCA-ACAT---CAGCAGCAACAGCAGCAACACCACCAGC------AGCAGCAACA------GCAACACCA------------------------------CCAGCAGCAGCAGCAGCAA---------------------------C------------AACCG-----------------------------------------------------CA-----CCGACA----------------------------------GCATCAGTTCCTGGATCCAGC-----------------GC------A---GCA---GCAACA---GCAAC------------------------AGCAG---------------C-------------------------AA---CAGCA------GCAGCAGACACAG---ACGCA---------------------------ACAGC---------AGCAGCCGCAACAGGCGG----------CCACA---CSizeHit CountTotal NormTotal
No Reads
droEle1
TAGCCTCAACAGCATTGGCCTCAGCAGCATTGGCCGCAGCAGCATCAGCAGCAGCAACA-TCAG---CCGCAGCAGCATCAGCA---------GC------AGCAACATCA---------------GCCGC---AG------C------A------GCATCA---------------------------------------------GCAGCAGCAACATCAGCCGCAG--------------------------------CAGCATAAGCCGCA-----GCAGCA---------------------------------------------------------------------------TCAGCAGCAGCA---------------AC------ATCAGCCGC---------AGCAG---------------C-------------------------AT---TAGCCGCAGCAGCAT---TAGCCGCAGCAG------------------------------------CATCAGCCGCAGCAGCA--------------------GCG---ASizeHit CountTotal NormTotal
No Reads
droRho1
CAGCAGCAACAACAGCAGCAGC---------------------AACAGCAGCAACAACA-GCAG---CAACAGCAGCAGCAACAACA------GC------AGCAACAACA------G------------------------CAGCAGCA------GCAGCA---------------------------------------------ACA---CCAACAACCACAGCAAC-ACTTGA----------------------AGTACCA------GCA--------------------------------------------------------------------------------ACTGCAATATCAAATGCAGCA---------GCAATATGAATACCAGCAGC---------AGCAG---------------C-------------------------AC---TACCA------GCAGCAGTTCCAGCAGCAA------------------------------CAGC---------AACAGCAGCAACATCTGA------CACCCACGG---CSizeHit CountTotal NormTotal
No Reads
droBia1
CATCAACAACAGCAGCAATTTC---------------------AGCAGCAGCAACAGCA-ACAG---AAGCAGCAGCAACAGCAACAGAAGGAACAACATCAGCAAC------------------CC----AAT--------CAACAGCA---GCAACAGCA---------------------------------------------GCA---GGAACTGCAACAGCAA--------------------------------ATGCA------GCA--------------------------------------------------------------------------------A---------------------T---TTCAGCAG------------CAGGAACAGCAACAGAAG---------------C-------------------AAGAGCAACAGAAGCAAGAG------------------CAGCA---------------------------TCAGC---------AACAGCAGCA---ACTGA------AACACAGCC---ASizeHit CountTotal NormTotal
No Reads
droTak1
GAGCCGCAGCAGCAGCAGCAGC---------------------AGCAACAACAGCAACA-GCAG---CAGCAGCCGCCGCAGCAGCAGCAACAGT----TCAGCTACCACA------G------------------------CAACAGCA------GCAATA---------------------------------------------ACA---ACTACTACCACAGCAA--------------------------------TGCCA------GCAAGCAGGCAGCAGCAGCACACGCCAGCAACA-TGTACCA------------------------------------------------ACA------GCAGCA---------GC---------------------------AGCAA---------------C-------------------ATCAGCAACAGCAGCAACATCTGC---------------AG---------------------------------C---AGCAGCAACAGCAACA------GCAAACAGCACACATCA---CSizeHit CountTotal NormTotal
No Reads
droEug1
CAGCACCATCAGCAGCAACAAC---------------------ACCAACAGCAGCAGCA-GCAA---CTCCAGCAGTTCCAGCCGCAGCCAGTGC------TGCCGCAAAT------GC---------------AG---------------AATGTTCGGGC---------------------------------------------GTATCCCTATCAGCC---A-AC-TAC--GAGTAACATGAACG-------------CCTA------CTA--------------------------------------------------------------------------------TCTGCACAACTTGCAGCATCA---------GCAGC------AGA-------------------------------------------------------GATTGCAGTTCCAACAGCAGCATCAG---CAGCAGCAACAT------------------------------------CAACCGCTGCAGCAGCA--------------------ACA---ASizeHit CountTotal NormTotal
No Reads
dm3
CAGCAACAACAGCAGCAGCAGC---------------------AACAACAGCAGCAGCA-ACAA---CAGCAGCAGCAGCAACAACA------GC------AGCAACAACAGCAGCAGC------------------------------A------ACAGCA---------------------------------------------GCA---GCAGCAGCAACACCAG--------------------------------GAGTT------GTA-----CCGCCA---------------------------------------------------------------------------GC---A---GCA---GCTACA---TC----------------------G---CACTAG------TATGAGCGGCATAGCCA----------------------------------GC--------------CAG---------------------------------C---AACACTTGCAGCA------ATTGGATGCACAGTACACCA---CSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................TACA---TC----------------------G---CACTAG------TATGAGCGGCATA.........................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................A---GCAGCAGCAACACCAG--------------------------------GAGTT------GT.............................................................................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
CAGCAACAACAGCAGCAGCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21201.3026000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000000000000000000100000000000000100000000001000000000001000000010000
..................................................................................................................................................................................................................................................................................................................................................................................................C----------------------G---CACTAG------TATGAGCGGCATAGCCA----------------------------------...................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCA------ATTGGATGCACAGTACACCA---C2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTGCAGCA------ATTGGATGCC..............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGCA------ATTGGATGCACAGTACACCA---.2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................CTAG------TATGAGCGGCATAGCCA----------------------------------...................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................AG------TATGAGCGGCATAGCCA----------------------------------GC--------------CAG---------------------------------C---AACAC......................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................A---GCTACA---TC----------------------G---CACTAG------TATGA.................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................................................................................................................................................................................................A---GCTACA---TC----------------------G---CACTAG------TATGAGCGGCATA.........................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................GCTACA---TC----------------------G---CACTAG------TATGAGCGGCA...........................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................A---GCAGCAGCAACACCAG--------------------------------GAGTT------GTA-----CC.....................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................GCTACA---TC----------------------G---CACTAG------TATGAGCGGCATA.........................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCAGCA------ATTGGATGCACA............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.............................................................................................GC------AGCAACAACAGCAGCAGC------------------------------A------ACAG...............................................................................................................................................................................................................................................................................................................................................................................................................................25150.4770000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................AGCAGCAGCAGCAACAACA------GC------AGCAAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2790.4440000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.............................................CAACAGCAGCAGCA-ACAA---CAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000
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...............................................ACAGCAGCAGCA-ACAA---CAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000100000000000000000000000000000000000000000000000000000000100010000000000000000000000000000000000000000000000000000
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......................................................CAGCA-ACAA---CAGCAGCAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000100000000000000000000000000000000000
.....................................................................GCAGCAGCAGCAACAACA------GC------AGCAACAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2840.2510000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................ACAGCAGCAGCA-ACAA---CAGCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AGCAACAACAGCAGCAGCAGC---------------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................GCA-ACAA---CAGCAGCAGCAGCAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................AA---CAGCAGCAGCAGCAACAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...................................................................................AACA------GC------AGCAACAACAGCAGCAGC------------------------------..........................................................................................................................................................................................................................................................................................................................................................................................................................................24190.2140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
...................................................................................AACA------GC------AGCAACAACAGCAGCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................23190.2140000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000
.....................................................................................CA------GC------AGCAACAACAGCAGCAGC------------------------------A------ACAGCA---------------------------------------------................................................................................................................................................................................................................................................................................................................................................................................29100.2020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................AACAACAGCAGCAGCA-ACAA---CAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................CAGC---------------------AACAACAGCAGCAGCA-...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000000000000000000000000000
CAGCAACAACAGCAGCAGCAGC---------------------AAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
.....................................................GCAGCA-ACAA---CAGCAGCAGCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000040000000000000000000000000000
........................................................................................................AACAACAGCAGCAGC------------------------------A------ACAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................21200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000100000000000000000000000
..................................................................................CAACA------GC------AGCAACAACAGCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000020000
......................................................................................................GCAACAACAGCAGCAGC------------------------------A------ACAGCA---------------------------------------------................................................................................................................................................................................................................................................................................................................................................................................24170.1830000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000
........................................................................................................AACAACAGCAGCAGC------------------------------A------ACAGCA---------------------------------------------GCA---GC........................................................................................................................................................................................................................................................................................................................................................................2760.1710000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................CAGCAACAACA------GC------AGCAACAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22190.1630000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................CAACAACAGCAGCAGC------------------------------A------ACAGCA---------------------------------------------GC..............................................................................................................................................................................................................................................................................................................................................................................25130.1520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................AGCAGCAGCAACAACA------GC------AGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000
.....ACAACAGCAGCAGCAGC---------------------AACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000
................................................................................................................CAGCAGC------------------------------A------ACAGCA---------------------------------------------GCA---GCAG......................................................................................................................................................................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................CAGCAGCA-ACAA---CAGCAGCAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................CAGCAACAACA------GC------AGCAAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
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..............................................................................................C------AGCAACAACAGCAGCAGC------------------------------A------A..................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000011000000000000000000000
.................................................AGCAGCAGCA-ACAA---CAGCAGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000020000000000000000000000000000
......................................................CAGCA-ACAA---CAGCAGCAGCAGCAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000
...................................................................................................................CAGC------------------------------A------ACAGCA---------------------------------------------GCA---GCAGCAG...................................................................................................................................................................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..............................................................................................C------AGCAACAACAGCAGCAGC------------------------------A------...................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000020000000000000000000000000000
.....................................................................GCAGCAGCAGCAACAACA------GC------A.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000
....................................................AGCAGCA-ACAA---CAGCAGCAGCAGCAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GCAGCAGCAGC---------------------AACAACAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000
....................................................AGCAGCA-ACAA---CAGCAGCAGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.1530000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................AACAGCAGCAGCA-ACAA---CAGCAGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000002000
.....................................................................................CA------GC------AGCAACAACAGCAGCAGC------------------------------A------...................................................................................................................................................................................................................................................................................................................................................................................................................................23200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................GCAACAACAGCAGCAGC------------------------------A------ACAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................23200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000
............................................................ACAA---CAGCAGCAGCAGCAACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000
...................................................CAGCAGCA-ACAA---CAGCAGCAGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...................................................................................................................CAGC------------------------------A------ACAGCA---------------------------------------------GCA---GCAGCAGC..................................................................................................................................................................................................................................................................................................................................................................22200.1530000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000
.................GCAGC---------------------AACAACAGCAGCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................ACAACAGCAGCAGCA-ACAA---CAGCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2670.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................AACA------GC------AGCAACAACAGCAGCAGC------------------------------A------A..................................................................................................................................................................................................................................................................................................................................................................................................................................2670.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................GCAACAACA------GC------AGCAACAACAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2470.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................AGCAGCAGCAGCAACAACA------GC------AGCAACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2870.1410000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................AACAACAGCAGCAGCA-ACAA---CAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25150.1320000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................CAACAACA------GC------AGCAACAACAGCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2580.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................C------------------------------A------ACAGCA---------------------------------------------GCA---GCAGCAGCAACAC.............................................................................................................................................................................................................................................................................................................................................................2480.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................CAGCAGCAGCAGCAACAACA------GC------AGCAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2780.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................AACAGCAGCAGC------------------------------A------ACAGCA---------------------------------------------GCA---GCAGCAGC..................................................................................................................................................................................................................................................................................................................................................................3090.1110000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................C------AGCAACAACAGCAGCAGC------------------------------..........................................................................................................................................................................................................................................................................................................................................................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
.....................C---------------------AACAACAGCAGCAGCA-ACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...............................................................................................................GCAGCAGC------------------------------A------ACAGCA---------------------------------------------GCA---GCAGC.....................................................................................................................................................................................................................................................................................................................................................................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................AACAGCAGCAGCA-ACAA---CAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000
........................................................................GCAGCAGCAACAACA------GC------AGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...............................................................A---CAGCAGCAGCAGCAACAACA------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
........ACAGCAGCAGCAGC---------------------AACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CAACAACAGCAGCAGCAGC---------------------A...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
.............................................................................................................................................................CAGCA---------------------------------------------GCA---GCAGCAGCAACACCA...........................................................................................................................................................................................................................................................................................................................................................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................AGCA-ACAA---CAGCAGCAGCAGCAAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.1020000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
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droSim2
CACCACCAACAGCAGCAGCAGC---------------------AACAGCAGCAGCAGCA-GCAA---CAGCAGCAACAGCAG---CAGCAACAGAAAC---AGCAGCAACA------------TCAT----ATG--------CAGCAGCA------GCAG------CAG---------------------------------CAGCAAC------AACCTTTGTCACCA--------------------------------CCTCA------CCC------------------------------------AC------------------------------------------------CCGGCA---GCA---GC---AACAGCAGT------------------------A----------------------------------------G-TGCAGCAGCGGCAGCAG------------------CAGCA------------------------------GC---GGCAGCGGCAGCGGCG------GC------CG---TCAA---CSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
............................................ACAGCAGCAGCAGCA-GCAA---CAGCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25201.3026000002600000000000
........................................................................................................................................................................................................................................................................................................................................................................................GC---AACAGCAGT------------------------A----------------------------------------G-TGCAGCAGCGG...........................................................................................................2411.00100010000000000000
.........................................................................................................GCAACA------------TCAT----ATG--------CAGCAGCA------GCAG------.........................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA------------------------------GC---GGCAGCGGCAGCGGC............................2111.00100000000000100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG------------------CAGCA------------------------------GC---GGCAGCGGCAGC...............................2390.11100000000000100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGCAGCAG------------------CAGCA------------------------------GC---GGC........................................20160.06100000000001000000
..............................................................................................................................................................................................................................................................................................................................................................................A---GCA---GC---AACAGCAGT------------------------A----------------------------------------........................................................................................................................16160.06100000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG------------------CAGCA------------------------------GC---GGCAGCGGC..................................20200.05100010000000000000
droSec2
CAGCAGCAGCAGCAGCAACATC---------------------CCCACCAGCAGCAGCA-GCAT---ATGCAGCATGTCCTGCAACTGCAGCAGCAACAGCAACA------------------ACACCTTC---AGCAGCAG---------------------------CAGCAT---------------------------C------------ACTTGCA----------------------------------------------------------GCACCAGATGCATAC-----GCATC-ATAACTT------------------------------------------------CCA------GCA---G---------------------------------------------------------CATGAAACGCCGGCAACAGTGT-CGCAG---CAGCAGCACATGCAA---CAGCAGCAGGCG------------------------------------CAGACGACACAGCAGCA--------------------ACA---TSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................................................CAGCAGCAGCA-GCAT---ATGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2030.3310001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA---CAGCAGCAGGCG------------------------------------CAG.........................................1880.1310010
droYak3
CAGCAGCAGCAGCAGCACCAGC---------------------AACAACACCACCCACACACGGCAGCAGCAGCAGCAACGGCAACA------------------------------------CCACC-GC---AACAGCAA---------------------------CAGCAGCAAGCTGCGCCTTCGGTTTTGCAACAGC------------ATTT----------------GGGTCACCTGAATT-----ACG-AAAGTGGA------GCA--------------------------------------------------------------------------------ACTGCAGCAGCA------------------------------------------------GCAG----------------------------------------CAA------CAGCAG------------------CGGCTGCAGCAGCAGCAACCAGTAGAAGTGGCTCGGCAACACT-GGCGCAGCA------TTTGG----------CAACA---CSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................................................................................................................................................................................................................................................TT-----ACG-AAAGTGGA------GCA--------------------------------------------------------------------------------ACT.........................................................................................................................................................................................................................1911.00101000000000
.................................................ACCACCCACACACGGCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
................................................................................................................................................................................................................................................................G-AAAGTGGA------GCA--------------------------------------------------------------------------------ACTGCAGCAGC.................................................................................................................................................................................................................2311.00101000000000
................................................................................................................................................................................................................................................ACCTGAATT-----ACG-AAAGTGGA------GC.............................................................................................................................................................................................................................................................................................................2211.00100100000000
..................................................................................................................................................................................................................................................................AAAGTGGA------GCA--------------------------------------------------------------------------------ACTGCAGCAGC.................................................................................................................................................................................................................2211.00100010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCGGCAACACT-GGCGCAGCA------TTTG....................2611.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................GCA------------------------------------------------GCAG----------------------------------------CAA------CAGCAG------------------CGGCT..............................................................................2120.50100100000000
..............................................................................................................................................................................................................................................................................................................................................................................A------------------------------------------------GCAG----------------------------------------CAA------CAGCAG------------------CGGCT..............................................................................1920.50100100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG------------------CGGCTGCAGCAGCAGC...................................................................2040.25100100000000
.......AGCAGCAGCACCAGC---------------------AACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19140.07101000000000
droEre2
CAGCCGCATCAGCACCAACATC---------------------AGCAGCATCAGCAGCA-GCAT---CAGCAGCAGCAGCATCAGCAGCATCAGC------AGCAGCATCA------GC------------------------------AGCAGCATCAGCA---------------------------------------------GCA---GCATCAGCAACACCAG--------------------------------------------CA--------------------------------------------------------------------------------A---------------------C---ATCTGCAC------------CAGCAGCAGCAACAGGCC------AACTTTCTCCACATCCA----------------------------GCAG------------------TCG------------------------------CTGCAGCACAACCACCAACTGA--------------------GCCA---CSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................CATC---------------------AGCAGCATCAGCAGCA-GCAT---CA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2630.3311000000
...............................................................................CATCAGCAGCATCAGC------AGCAGCATCA------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2630.3311000000
.............................................................................AGCATCAGCAGCATCAGC------AGCAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2380.1310001000
.....................................................................................................................................................AGCAGCATCAGCA---------------------------------------------GCA---GCA.......................................................................................................................................................................................................................................................................................................................................................................19200.1021000010
...........................................AGCAGCATCAGCAGCA-GCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.1021000010
.......................................................AGCA-GCAT---CAGCAGCAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.1021000010
.....................................................................................................AGCAGCATCA------GC------------------------------AGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................19200.1021000010
...................................................................CAGCAGCAGCAGCATCAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1022000000
...................................................................................AGCAGCATCAGC------AGCAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.1021000010
...........................................AGCAGCATCAGCAGCA-GCAT---CAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24110.0911000000
...................................................................................AGCAGCATCAGC------AGCAGCATCA------GC------------------------------..........................................................................................................................................................................................................................................................................................................................................................................................................................................24110.0911000000
.....................................................................................................AGCAGCATCA------GC------------------------------AGCAGCATCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................24110.0911000000
.....................................................................................................................................................AGCAGCATCAGCA---------------------------------------------GCA---GCATCAGC..................................................................................................................................................................................................................................................................................................................................................................24110.0911000000
.........................................................................................ATCAGC------AGCAGCATCA------GC------------------------------AGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................22120.0810000010
..........................................................................AGCAGCATCAGCAGCATCAGC------AGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24120.0810001000
...........................................................................................................ATCA------GC------------------------------AGCAGCATCAGCA---------------------------------------------GCA---..........................................................................................................................................................................................................................................................................................................................................................................22120.0810000010
.................................................ATCAGCAGCA-GCAT---CAGCAGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22120.0810000010
..........................................................................AGCAGCATCAGCAGCATCAGC------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21150.0710001000
........................................................................................................................................................AGCATCAGCA---------------------------------------------GCA---GCATCA....................................................................................................................................................................................................................................................................................................................................................................19190.0510000010
..............................................AGCATCAGCAGCA-GCAT---CA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19190.0510000010
......................................................................................AGCATCAGC------AGCAGCATCA------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................19190.0510000010
........................................................................................................AGCATCA------GC------------------------------AGCAGCATCA................................................................................................................................................................................................................................................................................................................................................................................................................................19190.0510000010
.........................................................CA-GCAT---CAGCAGCAGCAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000100

Generated: 05/18/2015 at 01:33 AM