ID:

dmo_1905

 Coordinate:

scaffold_6540:11413897-11414047 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.8 -7.8 -7.8

Flybase annnotation

exon [dmoj_GLEANR_9556:3]; CDS [Dmoj\GI24406-cds]; intron [Dmoj\GI24406-in]

No Repeatable elements found

mature
  1. scaffold_1659:123-146 +
  2. scaffold_3240:639-662 +
  3. scaffold_4338:6192-6215 +
  4. scaffold_5740:620-643 +
  5. scaffold_5758:1274-1297 +
  6. scaffold_6294:9418-9441 -
  7. scaffold_6450:34139-34162 -
  8. scaffold_6482:2671721-2671744 +
  9. scaffold_6496:17183228-17183251 +
  10. scaffold_6500:20375430-20375453 -
  11. scaffold_6500:20380893-20380916 -
  12. scaffold_6540:11410123-11410146 +
  13. dmo_1905  scaffold_6540:11413914-11413937 +
star
  1. scaffold_1659:155-179 +
  2. scaffold_1820:1350-1374 -
  3. scaffold_4338:6224-6248 +
  4. scaffold_5740:652-676 +
  5. scaffold_5758:1306-1330 +
  6. scaffold_5787:186-210 -
  7. scaffold_6294:9385-9409 -
  8. scaffold_6320:73792-73816 +
  9. scaffold_6450:34106-34130 -
  10. scaffold_6482:2671753-2671777 +
  11. scaffold_6496:17183260-17183284 +
  12. scaffold_6500:20375397-20375421 -
  13. scaffold_6500:20380860-20380884 -
  14. scaffold_6540:11410155-11410179 +
  15. dmo_1905  scaffold_6540:11413946-11413970 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
ACGGGAAGGGTTTAATGCGTTGGAGTGCGATTCGTTTGTATATGTGGACGATGGGATGATTGGCGATTTGTTTATAAGTAGTCGCTAGGGCGATTTGTTTATGTTGAGTTATGAAGGGGATCGTGGCTTTGGTGCAGAGTTTTAGTGTGGGTGAGTGCTGATGGATATATTACTATATATTTACCTACTGTTTTCTCTCAGTGATATTCCTAGTGCTTTGCGCAGCATGGATGTGCTCAGTAATTCAAGGA
*******************************************************************......................(((((((.((((((......))))))..)))))))******************************************************************************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 V056
head
 M060
embryo
 V041
embryo
...................................................................TTGTTTATAAGTAGTCGCTAGGGC................................................................................................................................................................ 24 0 13 1.54 20 13 6 0 1 0
.....................................................................................................................................................................................................TCAGTGATATTCCTAGTGCTTTGCGC............................ 26 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................................................................................AGCATGGTTTTGCTCAGGAAT....... 21 3 1 1.00 1 0 0 1 0 0
...................................................................TTGTTTATAAGTAGTCGCTAGGGCGATT............................................................................................................................................................ 28 0 12 0.92 11 2 9 0 0 0
...................................................................TTGTTTATAAGTAGTCGCTAGGGCG............................................................................................................................................................... 25 0 13 0.62 8 6 2 0 0 0
..............................................................................................TTGTTTATGTTGAGTTATGAAGGG..................................................................................................................................... 24 0 15 0.60 9 8 1 0 0 0
...................................................................TTGTTTATAAGTAGTCGCTAGGG................................................................................................................................................................. 23 0 13 0.38 5 2 1 0 2 0
..............................................................................................TTGTTTATGTTGAGTTATGAAGGGG.................................................................................................................................... 25 0 15 0.33 5 2 3 0 0 0
...................................................................TTGTTTATAAGTAGTCGCTAGGGCGA.............................................................................................................................................................. 26 0 13 0.31 4 2 2 0 0 0
.....................................................................................................................................................................................................................TGCTTTGCGCCGCACGGATA.................. 20 3 4 0.25 1 1 0 0 0 0
..............................................................................................TTGATTATGTTGAGTTATGAAGGGG.................................................................................................................................... 25 1 15 0.20 3 1 2 0 0 0
..............................................................................................TTGTTTATGTTGAGTTATGAAGGGGAT.................................................................................................................................. 27 0 15 0.20 3 1 2 0 0 0
............................................TGGGCGACGGGCTGATTGGCG.......................................................................................................................................................................................... 21 3 5 0.20 1 0 0 1 0 0
....................................................................................................AGGTTAAGTTATGAAGGG..................................................................................................................................... 18 2 19 0.16 3 2 1 0 0 0
.................................................................................................GTTAGGTTAAGTTATGAAGGG..................................................................................................................................... 21 3 19 0.16 3 1 2 0 0 0
............................................................................................................TTATGAAGGAGATCGTGGCTTTGGTGC.................................................................................................................... 27 1 7 0.14 1 0 0 0 1 0
...................................................................TTGTTTATAAGTAGTCGCTAGG.................................................................................................................................................................. 22 0 15 0.13 2 1 0 0 0 1
..............................................................................................TTGTTTATGTTGAGTTATGAAG....................................................................................................................................... 22 0 15 0.13 2 2 0 0 0 0
...............................................................................................................TGAAGGGGATCGTGGCTTTGGCGC.................................................................................................................... 24 1 8 0.13 1 0 0 0 1 0
...................................................................TTGTTTATAAGTAGTCGCTAGGGCGAT............................................................................................................................................................. 27 0 12 0.08 1 1 0 0 0 0
....................................................................TGTTTATAAGTAGTCGCTAGGGCGATT............................................................................................................................................................ 27 0 12 0.08 1 1 0 0 0 0
....................................................................TGTTTATAAGTAGTCGCTAGGGC................................................................................................................................................................ 23 0 13 0.08 1 1 0 0 0 0
...................................................................TTGTTTATAAGAAGTCGCTAGGG................................................................................................................................................................. 23 1 13 0.08 1 1 0 0 0 0
.......................................................................TTATAAGTAGTCGCTAGGGCGAT............................................................................................................................................................. 23 0 13 0.08 1 1 0 0 0 0
....................................................................TGTTTATAAGTAGTCGCTAGGGCG............................................................................................................................................................... 24 0 13 0.08 1 1 0 0 0 0
...................................................................TGGTTTATAAGTAGTCGCTAGGGC................................................................................................................................................................ 24 1 14 0.07 1 0 0 0 1 0
...................................................................................................TAGGTTAAGTTATGAAGGG..................................................................................................................................... 19 2 15 0.07 1 0 1 0 0 0
...................................................................................................TATGTTGAGTTATGAAGGGGATCGT............................................................................................................................... 25 0 15 0.07 1 0 1 0 0 0
..............................................................................................TTGTTTATGTTGAGTTATGAAGGGGA................................................................................................................................... 26 0 15 0.07 1 0 1 0 0 0
................................................................................................GTTTATGTTGAGTTATGAAGGG..................................................................................................................................... 22 0 15 0.07 1 1 0 0 0 0
...................................................................................................TATGTTGAGTTATGAAGGGGATCG................................................................................................................................ 24 0 15 0.07 1 0 1 0 0 0
..............................................................................................TTGTTTATGTTGAGTTATGAAGG...................................................................................................................................... 23 0 15 0.07 1 1 0 0 0 0
..................................................................................................TTAGGTTAAGTTATGAAGGG..................................................................................................................................... 20 2 15 0.07 1 1 0 0 0 0
...................................................................TTGTTTATAAGTAGTCGCTAGGTCG............................................................................................................................................................... 25 1 15 0.07 1 1 0 0 0 0
..............................................................................................TTGTTTATGTTGAGTTATGAAGTGG.................................................................................................................................... 25 1 15 0.07 1 0 1 0 0 0
.......................................................................................................TTAAGTTATGAAGGGCATGGTG.............................................................................................................................. 22 3 15 0.07 1 1 0 0 0 0
.................................................................................................TTTATGTTGAGTTATGAAGGGG.................................................................................................................................... 22 0 15 0.07 1 1 0 0 0 0
.......................................................................................................TTAAGTTATGAAGGGCATGGT............................................................................................................................... 21 3 15 0.07 1 1 0 0 0 0
..................................................................................................TTATGTTGAGTTATGAAGGGGATCGTG.............................................................................................................................. 27 0 15 0.07 1 1 0 0 0 0
...................................................................................................TAGGTTAAGTTATGAAGG...................................................................................................................................... 18 2 19 0.05 1 1 0 0 0 0
...........................................................................................................GTTATGAAGGGCATGGTGGA............................................................................................................................ 20 3 19 0.05 1 1 0 0 0 0
..............................................GACTAGGGGATGAATGGC........................................................................................................................................................................................... 18 3 20 0.05 1 1 0 0 0 0
..............................................................................................TTGTTTATGTTGAGTAATGAAGGG..................................................................................................................................... 24 1 20 0.05 1 0 1 0 0 0

Anti-sense strand reads

TGCCCTTCCCAAATTACGCAACCTCACGCTAAGCAAACATATACACCTGCTACCCTACTAACCGCTAAACAAATATTCATCAGCGATCCCGCTAAACAAATACAACTCAATACTTCCCCTAGCACCGAAACCACGTCTCAAAATCACACCCACTCACGACTACCTATATAATGATATATAAATGGATGACAAAAGAGAGTCACTATAAGGATCACGAAACGCGTCGTACCTACACGAGTCATTAAGTTCCT
*******************************************************************************************************************************......................(((((((.((((((......))))))..)))))))******************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V056
head
............................................................................................................................................................................................ACTAAAGAGAGTCACTGTAA........................................... 20 2 2 0.50 1 0 0 1
.............................................................................CATCAGCGATCCCGCTAAACAAATACA................................................................................................................................................... 27 0 18 0.28 5 4 1 0
................CGCAACCTCACGCTAAGCAAACATA.................................................................................................................................................................................................................. 25 0 16 0.25 4 3 1 0
...............................................................................TCAGCGATCCCGCTAAACAAATACA................................................................................................................................................... 25 0 20 0.25 5 3 2 0
.............................................................................................................................CGAAGCCACGTACCAAAATC.......................................................................................................... 20 3 10 0.20 2 0 2 0
.................GCAACCTCACGCTAAGCAAACATA.................................................................................................................................................................................................................. 24 0 16 0.13 2 2 0 0
..................................................................................................................................................CACCCACTCACGACTACCTATA................................................................................... 22 0 16 0.13 2 2 0 0
.................................................................................................................................................ACACCCACTCACGACTACCTATA................................................................................... 23 0 16 0.13 2 2 0 0
................................................................................CAGCGATCCCGCTAAACAAATACA................................................................................................................................................... 24 0 20 0.10 2 1 1 0
.......................................................................................CCCGCTAAACAAATACAACTC............................................................................................................................................... 21 0 20 0.10 2 0 2 0
.GCCCTTCCCAAATTACGCAACCTCACGCT............................................................................................................................................................................................................................. 29 0 11 0.09 1 1 0 0
..CCCTTCCCAAATTACGCAACCTCACG............................................................................................................................................................................................................................... 26 0 11 0.09 1 1 0 0
........CCAAATTACGCAACCTCACGCTAAGCA........................................................................................................................................................................................................................ 27 0 11 0.09 1 1 0 0
........CCAAATTACGCAACCTCACGCTAAGC......................................................................................................................................................................................................................... 26 0 11 0.09 1 1 0 0
....CTTCCCAAATTACGCAACCTCACGC.............................................................................................................................................................................................................................. 25 0 11 0.09 1 1 0 0
...............ACGCAACCTCACGCTAAGCAAACATA.................................................................................................................................................................................................................. 26 0 16 0.06 1 1 0 0
...............................................................................................................................................TCACACCCACTCACGACTACCTAT.................................................................................... 24 0 16 0.06 1 1 0 0
..................................................................................................................................................CACCCACTCACGACTACCTAT.................................................................................... 21 0 16 0.06 1 1 0 0
..................CAACCTCACGCTAAGCAAACATA.................................................................................................................................................................................................................. 23 0 16 0.06 1 1 0 0
.................GCAACCTCACGCGAAGCAAACATA.................................................................................................................................................................................................................. 24 1 16 0.06 1 1 0 0
............................................................................................................................................................................GATAGACAAATGGATGAC............................................................. 18 2 16 0.06 1 1 0 0
.............CTACGCAACCTCACGCTAAGCAAACATA.................................................................................................................................................................................................................. 28 1 16 0.06 1 0 1 0
................CGCAACCTCACGCTAAGCAAACAT................................................................................................................................................................................................................... 24 0 16 0.06 1 0 1 0
...................................................................................................................................................ACCCACTCACGACTACCTATA................................................................................... 21 0 16 0.06 1 1 0 0
..............................................................................ATCAGCGATCCCGCTAAACAAATACAA.................................................................................................................................................. 27 0 18 0.06 1 1 0 0
.............................................................................CATCAGCGATCCCGCTCAACAAATACA................................................................................................................................................... 27 1 19 0.05 1 0 1 0
...................................................................................CGATCCCGCTAAACAAATACAA.................................................................................................................................................. 22 0 20 0.05 1 0 1 0
..................................................................................GCGATCCCGCTAAACAAATACAACT................................................................................................................................................ 25 0 20 0.05 1 1 0 0
..................................................................................GCGATCCCGCTAAACAAATAC.................................................................................................................................................... 21 0 20 0.05 1 1 0 0
...............................................................................CCAGCGATCCCGCTAAACAAATACA................................................................................................................................................... 25 1 20 0.05 1 0 1 0
...................................................................................CGATCCCGCTAAACAAATACAACT................................................................................................................................................ 24 0 20 0.05 1 1 0 0
.................................................................................AGCGATCCCGCTAAACAAATACA................................................................................................................................................... 23 0 20 0.05 1 1 0 0
..................................................................................GCGATCCCGCTAAACAAATA..................................................................................................................................................... 20 0 20 0.05 1 1 0 0
................................................................................AAAAGATCCCGCTAAACAAATACA................................................................................................................................................... 24 3 20 0.05 1 1 0 0
................................................................................CAGCGATCCCGCTAAACTAATACA................................................................................................................................................... 24 1 20 0.05 1 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6540:11413847-11414097 + dmo_1905 ACGGG-----------------------------AAGGGTTTAATGCGTTG------------------GAGTGCG----ATTCGTTTGTATAT---GTGGACGATGGGATGATTGGCGATTTGTTTATAAGTAGTCGCTAGGGCGATTTGTTTATGTTGAGTTATGAAGGGGATCGTGGCTTTGGTGCAGAGTT--TTAGTGTGGGTGAG--TGCTGATGGATATATTACTATATATTTACCTACTGTTTTCTCTCAGTGATATTCCTAGTGCTTTGCGCAGCATGGATGTGCTCAGTAATTCAAGGA
droVir3 scaffold_13049:18957146-18957230 - GCT-----------------------------------------------------------------------TATG-----------------------------------------------------------------------------TGCTAAGTTATGTTAA--------------------------------AGGGTGGGTGCGACTATGGATATGTCACTATATATATATATATTTTTTTTTTTTTTTGTTAT--------------------------------------------
droGri2 scaffold_14624:2743397-2743446 - CAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGATATTTGTGTTGCTCTGCTCAGCATGGACTTGTACAGCAGCGCCA---
droWil2 scf2_1100000002510:1394-1591 - ACGCTTTTGGTTGTTAGGGGACAATTATTATTTCAAGTGTTTAATTGGTTATGTTAATTTTATGGATTAGCGTTCATACGCT----TTGGTTTTGAGGGGGAC-----AATTGTTGACAAT----------------------------------TGTCAAGTTATGTGGGTGATTGG------AGTGGGAAATTGAGTGGTGTGAGTGGATGGAGTGGCGGATACATTACTATATGTATGTATGCT--------------------------------------------------------------
droEre2 scaffold_1879:7386-7432 + T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGGGTGTAATAATGGATATGTTACTATATATTTGCTTTATACTTT---------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
ACGGG-----------------------------AAGGGTTTAATGCGTTG------------------GAGTGCG----ATTCGTTTGTATAT---GTGGACGATGGGATGATTGGCGATTTGTTTATAAGTAGTCGCTAGGGCGATTTGTTTATGTTGAGTTATGAAGGGGATCGTGGCTTTGGTGCAGAGTT--TTAGTGTGGGTGAG--TGCTGATGGATATATTACTATATATTTACCTACTGTTTTCTCTCAGTGATATTCCTAGTGCTTTGCGCAGCATGGATGTGCTCAGTAATTCAAGGASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................................................................................................................TTGTTTATAAGTAGTCGCTAGGGC....................................................................................................................................................................24131.54201300016
...............................................................................................................................................................................................................................................................TCAGTGATATTCCTAGTGCTTTGCGC............................2611.001100000
.........................................................................................................................TTGTTTATAAGTAGTCGCTAGGGCGATT................................................................................................................................................................28120.9211200009
.........................................................................................................................TTGTTTATAAGTAGTCGCTAGGGCG...................................................................................................................................................................25130.628600002
....................................................................................................................................................TTGTTTATGTTGAGTTATGAAGGG.........................................................................................................................................24150.609800001
.........................................................................................................................TTGTTTATAAGTAGTCGCTAGGG.....................................................................................................................................................................23130.385200021
....................................................................................................................................................TTGTTTATGTTGAGTTATGAAGGGG........................................................................................................................................25150.335200003
.........................................................................................................................TTGTTTATAAGTAGTCGCTAGGGCGA..................................................................................................................................................................26130.314200002
....................................................................................................................................................TTGTTTATGTTGAGTTATGAAGGGGAT......................................................................................................................................27150.203100002
.........................................................................................................................TTGTTTATAAGTAGTCGCTAGG......................................................................................................................................................................22150.132110000
....................................................................................................................................................TTGTTTATGTTGAGTTATGAAG...........................................................................................................................................22150.132200000
.........................................................................................................................TTGTTTATAAGTAGTCGCTAGGGCGAT.................................................................................................................................................................27120.081100000
..........................................................................................................................TGTTTATAAGTAGTCGCTAGGGCGATT................................................................................................................................................................27120.081100000
..........................................................................................................................TGTTTATAAGTAGTCGCTAGGGC....................................................................................................................................................................23130.081100000
.............................................................................................................................TTATAAGTAGTCGCTAGGGCGAT.................................................................................................................................................................23130.081100000
..........................................................................................................................TGTTTATAAGTAGTCGCTAGGGCG...................................................................................................................................................................24130.081100000
.........................................................................................................................................................TATGTTGAGTTATGAAGGGGATCGT...................................................................................................................................25150.071000001
....................................................................................................................................................TTGTTTATGTTGAGTTATGAAGGGGA.......................................................................................................................................26150.071000001
......................................................................................................................................................GTTTATGTTGAGTTATGAAGGG.........................................................................................................................................22150.071100000
.........................................................................................................................................................TATGTTGAGTTATGAAGGGGATCG....................................................................................................................................24150.071000001
....................................................................................................................................................TTGTTTATGTTGAGTTATGAAGG..........................................................................................................................................23150.071100000
.......................................................................................................................................................TTTATGTTGAGTTATGAAGGGG........................................................................................................................................22150.071100000
........................................................................................................................................................TTATGTTGAGTTATGAAGGGGATCGTG..................................................................................................................................27150.071100000
droVir3
GCT-----------------------------------------------------------------------TATG-----------------------------------------------------------------------------TGCTAAGTTATGTTAA--------------------------------AGGGTGGGTGCGACTATGGATATGTCACTATATATATATATATTTTTTTTTTTTTTTGTTAT--------------------------------------------SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...........................................................................................................................................................TGCTAAGTTATGTTAA--------------------------------AGGGTGGGTG................................................................................................26205.0510100000000000000000000000000000000000010100000000000000000000000000
.......................................................................................................................................................................................................................ACTATGGATATGTCACTATATATATA....................................................................26201.55310031000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................TAAGTTATGTTAA--------------------------------AGGGTGGG..................................................................................................21200.459009000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................GTTAA--------------------------------AGGGTGGGTGCGAC............................................................................................19200.357000000000000000000000000000000000000000000000000000000000000070
..................................................................................................................................................................TTATGTTAA--------------------------------AGGGTGGGTGCGA.............................................................................................22200.204000000000000000000000000000100000000200000000000000000000000010
..........................................................................TATG-----------------------------------------------------------------------------TGCTAAGTTATGTTAA--------------------------------AGGGT.....................................................................................................25200.204000000000000000000000000000400000000000000000000000000000000000
..............................................................................................................................................................TAAGTTATGTTAA--------------------------------AGGGTGGGTG................................................................................................23200.153000000000000000000000000000300000000000000000000000000000000000
..............................................................................................................................................................TAAGTTATGTTAA--------------------------------AGGGTGGGTGCGAC............................................................................................27200.153000000000000000000000000000000000000000000000000000000000000030
..........................................................................TATG-----------------------------------------------------------------------------TGCTAAGTTATGTTAA--------------------------------AGGGTG....................................................................................................26200.153000000000000000000000000000010000000200000000000000000000000000
................................................................................................................................................................AGTTATGTTAA--------------------------------AGGGTGGGTGCGA.............................................................................................24200.102000000000000000000000000000000000000200000000000000000000000000
.....................................................................................................................................................................TGTTAA--------------------------------AGGGTGGGTGCGACTATG........................................................................................24200.102000000000000000000000000002000000000000000000000000000000000000
.....................................................................................................................................................................TGTTAA--------------------------------AGGGTGGGTGCGACTATGGA......................................................................................26200.102000000000000000000000000002000000000000000000000000000000000000
.........................................................................................................................................................................................................................TATGGATATGTCACTATATATATAT...................................................................25200.102000000000000000000000000020000000000000000000000000000000000000
...............................................................................................................................................................AAGTTATGTTAA--------------------------------AGGGTGG...................................................................................................19200.051000000000000000000000000000000000000000000000000000000000001000
.........................................................................................................................................................................................................................TATGGATATGTCACTATATATA......................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................TATGTTAA--------------------------------AGGGTGGGTGCG..............................................................................................20200.051000000000000000000000000000000000000000100000000000000000000000
...........................................................................................................................................................TGCTAAGTTATGTTAA--------------------------------AGGGTGGGA.................................................................................................25200.051000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................TAAGTTATGTTAA--------------------------------AGGGTGGGT.................................................................................................22200.051000000000000000000000000000000000000010000000000000000000000000
...........................................................................................................................................................TGCTAAGTTATGTTAA--------------------------------AGGGTGC...................................................................................................23200.051000000000000000000000000000100000000000000000000000000000000000
........................................................................................................................................................................TAA--------------------------------AGGGTGGGTGCGACTATGGAT.....................................................................................24200.051000000000000000000000000100000000000000000000000000000000000000
.............................................................................................................................................................CTAAGTTATGTTAA--------------------------------AGGGTG....................................................................................................20200.051000000000000000000000000000000000000000000000000000000000000100
...................................................................................................................................................................TATGTTAA--------------------------------AGGGTGGGTGCGACTATG........................................................................................26200.051000000100000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................TAAGTTATGTTAA--------------------------------AGGGTGGGTGCG..............................................................................................25200.051000000000000000000001000000000000000000000000000000000000000000
......................................................................................................................................................................................................................GACTATGGATATGTCACTATATATATA....................................................................27200.051001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................TAAGTTATGTTAA--------------------------------AGGGTGGGTGC...............................................................................................24200.051000000000000000000000000000000100000000000000000000000000000000
........................................................................................................................................................................................................................CTATGGATATGTCACTATATATATA....................................................................25200.051000010000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................GCTAAGTTATGTTAA--------------------------------AGGGTG....................................................................................................21200.051000000010000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................TAA--------------------------------AGGGTGGGTGCGACTATGGATATG..................................................................................27200.051000010000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................TTATGTTAA--------------------------------AGGGTGGGT.................................................................................................18200.051000000000000000000000000100000000000000000000000000000000000000
.......................................................................................................................................................................................................................ACTATGGATATGTCACTATATATATATA..................................................................28200.051000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................................................TATGGATATGTCACTATATATATATAT.................................................................27200.051000000000000000000000000100000000000000000000000000000000000000
........................................................................................................................................................................................................................CTATGGATATGTCACTATATATATATA..................................................................27200.051000000000000000000000000000000000000100000000000000000000000000
droGri2
CAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGATATTTGTGTTGCTCTGCTCAGCATGGACTTGTACAGCAGCGCCA---SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
ACGCTTTTGGTTGTTAGGGGACAATTATTATTTCAAGTGTTTAATTGGTTATGTTAATTTTATGGATTAGCGTTCATACGCT----TTGGTTTTGAGGGGGAC-----AATTGTTGACAAT----------------------------------TGTCAAGTTATGTGGGTGATTGG------AGTGGGAAATTGAGTGGTGTGAGTGGATGGAGTGGCGGATACATTACTATATGTATGTATGCT--------------------------------------------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...........................................................TTATGGATTAGCGTTCATACGCT----T..............................................................................................................................................................................................................................24201.1022000220
............GTTAGGGGACAATTATTATTTCAAG................................................................................................................................................................................................................................................................................2520.50101000
...........................................................................................................................................................................TGATTGG------AGTGGGAAATTGAGTGG............................................................................................................24200.501009100
........................................................................TTCATACGCT----TTGGTTTTGAGGG..................................................................................................................................................................................................................23200.20400040
..............................................................................................................................................................CAAGTTATGTGGGTGATTGG------AGTGG........................................................................................................................25200.10202000
.............................................................................................................................................................TCAAGTTATGTGGGTGATTGG------AGTGG........................................................................................................................26200.10202000
....................................................................................................................................................................ATGTGGGTGATTGG------AGTGGGAA.....................................................................................................................22200.05101000
..................................................................................................................................................................................................TGAGTGGTGTGAGTGGATGGAGTGGCG........................................................................................27200.05100100
.............................................................................................................................................................TCAAGTTATGTGGGTGATTGG------A............................................................................................................................22200.05100010
.......................................................................................................................................................................TGGGTGATTGG------AGTGGGAAATTGAG...............................................................................................................25200.05101000
ACGCTTTTGGTTGTTAGGGG.................................................................................................................................................................................................................................................................................................20200.05101000
..................................................................................................................................................................TTATGTGGGTGATTGG------AGTGGGAAAT...................................................................................................................26200.05101000
............................................................TATGGATTAGCGTTCATACGCT----TTGGTTT........................................................................................................................................................................................................................29200.05100010
..........................................................................................................................................................................................................GTGAGTGGATGGAGTGGCGGA......................................................................................21200.05100001
.....................................................................................................................................................................TGTGGGTGATTGG------AGTGGGAAAT...................................................................................................................23200.05101000
......................................................................................................................................................................................................TGGTGTGAGTGGATGGAGTGG..........................................................................................21200.05101000
droEre2
T-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTGGGTGTAATAATGGATATGTTACTATATATTTGCTTTATACTTT---------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................................................................................................................................................................................................GTGGGTGTAATAATGGATATG..................................................................................21200.1020000200
.................................................................................................................................................................................................................GGTGTAATAATGGATATGTTA...............................................................................21200.0511000000

Generated: 05/18/2015 at 01:33 AM