ID:

dmo_19

Coordinate:

scaffold_6308:1287577-1287639 +

Confidence:

confident

Class:

Canonical miRNA

Genomic Locale:

antisense_to_intron

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-41.6 -41.2

Flybase annnotation

Antisense to intron [Dmoj\GI10984-in]

No Repeatable elements found

Sense Strand Reads

ACGATCTATATATGTTCCCATAACAGGGTCTGCTGCTGGAGGTCTATAGTTCCATCTAGATCCCATTACATATACAATATTACAATACTATGTAAGGGGATCCAGATGGAATTATCGATCTCAAGAAGCTGAGTTTGCTATGGATCACAGTGAAATAGTTGAA

***********************************((.((((((.((((((((((((.((((((.(((((((................))))))).)))))).)))))))))))).)))))).))..************************************
Read size # Mismatch Hit Count Total Norm Total V110

male body
M046

female body

V056

head

V049

head

M060

embryo

V041

embryo

..........................................................................................TGTAAGGGGATCCAGATGGAAT................................................... 22 0 1 5080.00 5080 5006 48 16 5 2 3
..........................................................................................TGTAAGGGGATCCGGATGGAAT................................................... 22 1 1 943.00 943 921 16 2 3 1 0
..........................................................................................TGTAAGGGGATCCAGATGGAATC.................................................. 23 1 1 407.00 407 401 6 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGATGGAATT.................................................. 23 0 1 291.00 291 288 3 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGATGGAA.................................................... 21 0 1 284.00 284 277 4 2 1 0 0
..........................................................................................TGTAAGGGGATCCGGATGGAAC................................................... 22 2 1 178.00 178 174 1 2 1 0 0
..........................................................................................TGTAAGGGGATCCGGATGGAATC.................................................. 23 2 1 165.00 165 165 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGATGGAAC................................................... 22 1 1 163.00 163 162 0 0 1 0 0
...........................................................................................GTAAGGGGATCCAGATGGAAT................................................... 21 0 1 122.00 122 118 4 0 0 0 0
..........................................................................................TGTAAGGGGATCCGGATGGAA.................................................... 21 1 1 100.00 100 99 1 0 0 0 0
...........................................................................................GTAAGGGGATCCGGATGGAAT................................................... 21 1 1 70.00 70 66 4 0 0 0 0
...........................................................................................GTAAGGGGATCCGGATGGAAC................................................... 21 2 1 51.00 51 51 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCGGATGGAATT.................................................. 23 1 1 35.00 35 35 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGATGGA..................................................... 20 0 1 32.00 32 31 0 1 0 0 0
..........................................................................................TGTAAGGGGATCCAGATGGAGT................................................... 22 1 1 31.00 31 31 0 0 0 0 0
...........................................................................................GTAAGGGGATCCAGATGGAATC.................................................. 22 1 1 30.00 30 29 1 0 0 0 0
...........................................................................................GTAAGGGGATCCGGATGGAATC.................................................. 22 2 1 29.00 29 29 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGATGGAATTC................................................. 24 1 1 19.00 19 19 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCGGATGGAGT................................................... 22 2 1 19.00 19 14 4 1 0 0 0
...........................................................................................GTAAGGGGATCCAGATGGAATT.................................................. 22 0 1 18.00 18 18 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGATGGAATG.................................................. 23 1 1 15.00 15 14 1 0 0 0 0
..........................................................................................TGTAAGTGGATCCAGATGGAAT................................................... 22 1 1 14.00 14 14 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGATGGAATA.................................................. 23 1 1 13.00 13 13 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCGGATGGAATTC................................................. 24 2 1 12.00 12 11 0 0 1 0 0
..........................................................................................TGTAGGGGGATCCAGATGGAAT................................................... 22 1 1 12.00 12 11 1 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGATGGAAA................................................... 22 1 1 11.00 11 11 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGATGGAGTC.................................................. 23 2 1 11.00 11 11 0 0 0 0 0
...........................................................................................GTAAGGGGATCCAGATGGAAC................................................... 21 1 1 9.00 9 9 0 0 0 0 0
............................................................................................TAAGGGGATCCAGATGGAATTC................................................. 22 1 1 8.00 8 8 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGATGG...................................................... 19 0 1 8.00 8 8 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCGGATGGAATG.................................................. 23 2 1 8.00 8 8 0 0 0 0 0
..........................................................................................TGTAATGGGATCCAGATGGAAT................................................... 22 1 1 7.00 7 7 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGATGGAATTT................................................. 24 1 1 7.00 7 7 0 0 0 0 0
..........................................................................................TGTAAGGTGATCCAGATGGAAT................................................... 22 1 1 7.00 7 6 0 0 0 1 0
..........................................................................................TGTAGGGGGATCCGGATGGAAT................................................... 22 2 1 7.00 7 7 0 0 0 0 0
............................................................................................TAAGGGGATCCAGATGGAATTT................................................. 22 1 1 7.00 7 7 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGATTGAAT................................................... 22 1 1 7.00 7 7 0 0 0 0 0
..........................................................................................TATAAGGGGATCCAGATGGAAT................................................... 22 1 1 6.00 6 6 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGATGGAG.................................................... 21 1 1 6.00 6 6 0 0 0 0 0
...........................................................................................TTAAGGGGATCCAGATGGAAT................................................... 21 1 1 6.00 6 6 0 0 0 0 0
..........................................................................................TGTAAGGGGACCCAGATGGAAT................................................... 22 1 1 6.00 6 6 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCGGATGGGAT................................................... 22 2 1 6.00 6 6 0 0 0 0 0
..........................................................................................TTTAAGGGGATCCAGATGGAAT................................................... 22 1 1 6.00 6 5 0 0 0 1 0
..........................................................................................TGCAAGGGGATCCAGATGGAAT................................................... 22 1 1 5.00 5 5 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCGGATGGAATA.................................................. 23 2 1 5.00 5 5 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCGGATG....................................................... 18 1 1 5.00 5 5 0 0 0 0 0
...........................................................................................GTAAGGGGATCCGGATGGAATA.................................................. 22 2 1 5.00 5 4 0 0 1 0 0
..........................................................................................TGTAAGGGGATCCGGATGGAG.................................................... 21 2 1 5.00 5 5 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGATGTAAT................................................... 22 1 1 5.00 5 5 0 0 0 0 0
...........................................................................................GTAAGGGGATCCGGATGGAA.................................................... 20 1 1 5.00 5 5 0 0 0 0 0
..........................................................................................TGTAAGGGGGTCCAGATGGAAT................................................... 22 1 1 5.00 5 5 0 0 0 0 0
...........................................................................................GTAAGGGGATCCAGATGGAA.................................................... 20 0 1 5.00 5 5 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGATGGATT................................................... 22 1 1 4.00 4 4 0 0 0 0 0
..................................................TCCATCTGGATCCCATTACATA........................................................................................... 22 1 2 4.00 8 4 2 0 0 2 0
..........................................................................................TGTAAGGGGATCCAGATGGAATTG................................................. 24 1 1 4.00 4 4 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGGTGGAAT................................................... 22 1 1 4.00 4 4 0 0 0 0 0
..........................................................................................TGTAAGGGTATCCAGATGGAAT................................................... 22 1 1 4.00 4 4 0 0 0 0 0
..........................................................................................TGTAATGGGATCCGGATGGAAT................................................... 22 2 1 4.00 4 4 0 0 0 0 0
...........................................................................................GTAAGGGGATCCGGATGGAATT.................................................. 22 1 1 4.00 4 4 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGATGAAT.................................................... 21 2 1 4.00 4 4 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGATGAAAT................................................... 22 1 1 4.00 4 4 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGATGGAAG................................................... 22 1 1 3.00 3 3 0 0 0 0 0
...........................................................................................GTAAGGGGATCCAGATGGAATA.................................................. 22 1 1 3.00 3 3 0 0 0 0 0
..........................................................................................TGTAAGGGCATCCAGATGGAAT................................................... 22 1 1 3.00 3 3 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGATGGAAAT.................................................. 23 1 1 3.00 3 3 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCGGATGGAAA................................................... 22 2 1 3.00 3 3 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCGGATGAAAT................................................... 22 2 1 3.00 3 3 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGATGGGAT................................................... 22 1 1 3.00 3 3 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCTGATGGAAT................................................... 22 1 1 3.00 3 3 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGATGGAATAT................................................. 24 2 1 3.00 3 3 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCGGATGTAAT................................................... 22 2 1 3.00 3 3 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCGGATGG...................................................... 19 1 1 3.00 3 3 0 0 0 0 0
...........................................................................................GTAAGGGGATCCGGATGGAATG.................................................. 22 2 1 3.00 3 3 0 0 0 0 0
............................................................................................TAAGGGGATCCGGATGGAATTC................................................. 22 2 1 3.00 3 3 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGATGGAGTT.................................................. 23 1 1 3.00 3 3 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCGGATGGAGTC.................................................. 23 3 1 3.00 3 3 0 0 0 0 0
..........................................................................................TCTAAGGGGATCCAGATGGAAT................................................... 22 1 1 3.00 3 3 0 0 0 0 0
...........................................................................................TTAAGGGGATCCGGATGGAAT................................................... 21 2 1 3.00 3 3 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGATGGTAT................................................... 22 1 1 2.00 2 2 0 0 0 0 0
..........................................................................................TGTAAGGGGATCTAGATGGAAT................................................... 22 1 1 2.00 2 2 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCGGATGGAGC................................................... 22 3 1 2.00 2 2 0 0 0 0 0
..........................................................................................AGTAAGGGGATCCGGATGGAAT................................................... 22 2 1 2.00 2 2 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGATGGCAT................................................... 22 1 1 2.00 2 2 0 0 0 0 0
......................................................................................GATCTGTAAGGGGATCCAGATGGAAT................................................... 26 3 1 2.00 2 2 0 0 0 0 0
..........................................................................................TGTGAGGGGATCCGGATGGAAT................................................... 22 2 1 2.00 2 2 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCGGATGGATA................................................... 22 3 1 2.00 2 2 0 0 0 0 0
..........................................................................................TGTAAGGGGCTCCGGATGGAAT................................................... 22 2 1 2.00 2 2 0 0 0 0 0
............................................................................................TAAGGGGATCCAGATGGAAT................................................... 20 0 1 2.00 2 1 0 0 0 0 1
..........................................................................................TGTCAGGGGATCCAGATGGAAT................................................... 22 1 1 2.00 2 2 0 0 0 0 0
............................................................................................TAAGGGGATCCAGATGGAA.................................................... 19 0 1 2.00 2 2 0 0 0 0 0
..........................................................................................TGTAAGAGGATCCAGATGGAAT................................................... 22 1 1 2.00 2 2 0 0 0 0 0
..........................................................................................TGTAAGGGGATCAGGATGGAAT................................................... 22 2 1 2.00 2 2 0 0 0 0 0
.........................................................................................CTGTAAGGGGATCCAGATGGAAT................................................... 23 1 1 2.00 2 2 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGATGGAATTA................................................. 24 0 1 2.00 2 2 0 0 0 0 0
..........................................................................................TTTAAGGGGATCCAGATGGAA.................................................... 21 1 1 2.00 2 2 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCATATGGAAT................................................... 22 1 1 2.00 2 2 0 0 0 0 0
..........................................................................................TGTAAGGGGATCTAGATGGAATT.................................................. 23 1 1 2.00 2 2 0 0 0 0 0
..........................................................................................TGTAAGGGGATACAGATGGAAT................................................... 22 1 1 2.00 2 2 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCGGATGGATT................................................... 22 2 1 2.00 2 2 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCGGATGGAC.................................................... 21 2 1 2.00 2 2 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGATTGAATC.................................................. 23 2 1 2.00 2 2 0 0 0 0 0
..........................................................................................TGTAAGGTGATCCGGATGGAAT................................................... 22 2 1 2.00 2 2 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGATAGAAT................................................... 22 1 1 2.00 2 2 0 0 0 0 0
..................................................TCCATCTAGATCCCATTACATC........................................................................................... 22 1 1 2.00 2 1 1 0 0 0 0
..........................................................................................TGTATGGGGATCCAGATGGAAT................................................... 22 1 1 2.00 2 2 0 0 0 0 0
..........................................................................................TGTAAGGTGATCCGGATGGAA.................................................... 21 2 1 2.00 2 2 0 0 0 0 0
..........................................................................................TGTAAGTGGATCCGGATGGAAT................................................... 22 2 1 2.00 2 2 0 0 0 0 0
..........................................................................................CGTAAGGGGATCCAGATGGAAT................................................... 22 1 1 2.00 2 2 0 0 0 0 0
..........................................................................................TATAAGGGGATCCGGATGGAAT................................................... 22 2 1 2.00 2 2 0 0 0 0 0
..........................................................................................TGCAAGGGGATCCAGATGGAATC.................................................. 23 2 1 2.00 2 2 0 0 0 0 0
..........................................................................................TGTAAGAGGATCCGGATGGAAT................................................... 22 2 1 2.00 2 2 0 0 0 0 0
..........................................................................................TGTAAGGGGATCAAGATGGAAT................................................... 22 1 1 2.00 2 2 0 0 0 0 0
..........................................................................................TGCAAGGGGATCCAGATGGAA.................................................... 21 1 1 2.00 2 2 0 0 0 0 0
...........................................................................................GTAAGGGGATCCAGATGGAATG.................................................. 22 1 1 2.00 2 2 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCGTATGGAAT................................................... 22 2 1 2.00 2 2 0 0 0 0 0
..........................................................................................TGTAAGTGGATCCAGATGGAATC.................................................. 23 2 2 1.50 3 3 0 0 0 0 0
..........................................................................................TGTAAGTGGATCCAGATGGAAC................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..............................................................................................AGGGGATCCAGATGGAAT................................................... 18 0 1 1.00 1 1 0 0 0 0 0
............................................................................................TAAGGGGATCCGGATGGAATGC................................................. 22 3 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGATGTAA.................................................... 21 1 1 1.00 1 1 0 0 0 0 0
............................................................................................TAAGGGGATCCAGATGGAATT.................................................. 21 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCGGATGGA..................................................... 20 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGGTGGAATC.................................................. 23 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCATATGGAATC.................................................. 23 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGACCCAGATGGAATC.................................................. 23 2 1 1.00 1 1 0 0 0 0 0
............................................................................................TGAGGGGATCCAGATGGAAT................................................... 20 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGATGGTC.................................................... 21 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGTATCCAGATGGAATT.................................................. 23 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCCGATGGAAT................................................... 22 1 1 1.00 1 0 0 1 0 0 0
..........................................................................................TGTAAGGCGATCCAGATGGAAT................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAACGGGATCCAGATGGA..................................................... 20 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGTATCCGGATGGAAT................................................... 22 2 1 1.00 1 1 0 0 0 0 0
...........................................................................................GTAAGGGGATCCAGATGGAATTT................................................. 23 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAGGGGGATCCAGATGGAATG.................................................. 23 2 1 1.00 1 1 0 0 0 0 0
.............................................................................................AAGGGGATCCGGATGGAAT................................................... 19 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TATAAGGGGATCCAGATGGAATC.................................................. 23 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGACGGAATC.................................................. 23 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGATGGAATTTC................................................ 25 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGTGGATCCAGATGGGAT................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGATTCAGATGGAA.................................................... 21 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................GTAAGGGGATCCGGATTGAAC................................................... 21 3 1 1.00 1 1 0 0 0 0 0
..................................................TCCATCTGGATCCCATTACAT............................................................................................ 21 1 2 1.00 2 1 1 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGATGC...................................................... 19 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGAACCAGATGGAAT................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGACCCGGATGGAAT................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGTATCCGGATGGATT................................................... 22 3 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCGGATGGGAC................................................... 22 3 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCTGTTGGAAT................................................... 22 2 1 1.00 1 0 0 0 0 0 1
...........................................................................................GTAAGGGGATCCGGATGGAATTC................................................. 23 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCACATGGAATC.................................................. 23 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGAAAGGGGATCCAGATGGAAT................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCGGATTGAAT................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAACGGGATCCGGATGGAAT................................................... 22 2 1 1.00 1 1 0 0 0 0 0
........................................................................................TCTGTAAGGGGATCCAGATGGAAT................................................... 24 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................GGTAAGGGGATCCGGATGGAAT................................................... 22 2 1 1.00 1 0 0 0 1 0 0
..........................................................................................TGTAAGGGGATCCAGATGCAAT................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGATCAGGATGGAATC.................................................. 23 3 1 1.00 1 1 0 0 0 0 0
............................................................................................TAAGGGGATCCAGATGGAATGT................................................. 22 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAATGGGATCCAGATTGAAT................................................... 22 2 1 1.00 1 1 0 0 0 0 0
.............................................................................................AAGGGGATCCAGATGGAAC................................................... 19 1 1 1.00 1 1 0 0 0 0 0
............................................................................................TGTGGGGATCCAGATGGAAT................................................... 20 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGATTCAGATGGAATC.................................................. 23 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGTGATCCAGATGTAATT.................................................. 23 2 1 1.00 1 1 0 0 0 0 0
...........................................................................................GTAAGGGGATCTAGATGGAATT.................................................. 22 1 1 1.00 1 1 0 0 0 0 0
............................................................................................TAAGGGGATCCGGATGGAATTTC................................................ 23 3 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGATGGAAATC................................................. 24 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGCGATCCGGATGGAAT................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCGGAAGGAAT................................................... 22 2 1 1.00 1 1 0 0 0 0 0
............................................................................................TAAGGGGATCCGGATGGAATTT................................................. 22 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAGGGGGATCCGGATGGATT................................................... 22 3 1 1.00 1 1 0 0 0 0 0
..................................................TCCATCTAGATCCCATTACAT............................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGATGGAATCA................................................. 24 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGAATGAATC.................................................. 23 3 1 1.00 1 1 0 0 0 0 0
.........................................................................................CTGTAAGGGGATCCAGATGGAATC.................................................. 24 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGAGATCCAGATGGAAT................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGATGGAATCT................................................. 24 2 1 1.00 1 1 0 0 0 0 0
...........................................................................................GTAATGGGATCCAGATGGAAT................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGATGGATTT.................................................. 23 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGGAAGGGGATCCAGATGGAA.................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGATTGAAC................................................... 22 2 1 1.00 1 1 0 0 0 0 0
...........................................................................................GTAAGGGTATCCAGATGGAAT................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGGAAGGGGATCCAGATGGAAT................................................... 22 1 1 1.00 1 0 0 1 0 0 0
.........................................................................................GTGTAAGGGGATCCAGATGGAAT................................................... 23 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................GTAAGGGGATCCGTATGGAAC................................................... 21 3 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGATGGAACC.................................................. 23 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGATGGAAAA.................................................. 23 2 1 1.00 1 1 0 0 0 0 0
...........................................................................................TGTAGGGGATCCAGATGGAAT................................................... 21 3 2 1.00 2 1 0 0 0 0 1
..........................................................................................TGTAAGGGGATCCATATGGAA.................................................... 21 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................GTAAGGGGATCCGGATGG...................................................... 18 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGAACGGGGATCCAGATGGAAT................................................... 22 2 1 1.00 1 0 0 1 0 0 0
..........................................................................................TGTAAGGGGATCCAGATGTAATC.................................................. 23 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCGGATGGAAG................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGATGGACTC.................................................. 23 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGATGGC..................................................... 20 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAAGGGATCCAGATGGAAT................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGCGATCCAGATGGAAC................................................... 22 2 1 1.00 1 1 0 0 0 0 0
...........................................................................................GTAAGGGGATCCGGAGGGAAC................................................... 21 3 1 1.00 1 1 0 0 0 0 0
...........................................................................................GTAAGGGGATCCATATGGAAT................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGATGCAGATGGAAT................................................... 22 1 1 1.00 1 0 1 0 0 0 0
...........................................................................................GTAAGGGGATCCAGATGAAAT................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................CGTAAGGGGATCCAGATGGAATC.................................................. 23 2 1 1.00 1 1 0 0 0 0 0
...........................................................................................GAAAGGGGATCCAGATGGAAC................................................... 21 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAAATGGAATT.................................................. 23 1 1 1.00 1 0 0 1 0 0 0
..........................................................................................TCTAAGGGGATCCAGATGGAATT.................................................. 23 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGAAAGGGGATCCGGATGGAATC.................................................. 23 3 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCGGATGGGATT.................................................. 23 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGGAAGGGGATCCAGATGGAAG................................................... 22 2 1 1.00 1 0 0 1 0 0 0
...........................................................................................GTAAGGGGATCCAGATGGAGTA.................................................. 22 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAAATGGAAT................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGATGGGATCT................................................. 24 3 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCGGATGGAAAA.................................................. 23 3 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGTATCCAGATTGAAT................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCCGATGGTAT................................................... 22 2 1 1.00 1 0 0 1 0 0 0
...........................................................................................GTGAGGGGATCCGGATGGAAT................................................... 21 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTGAGGGGATCCAGATGGAAT................................................... 22 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................GTAAGGGGATCCAGATGGA..................................................... 19 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGATGCGGATGGAAT................................................... 22 2 1 1.00 1 0 1 0 0 0 0
..........................................................................................TGGAAGGGGATCCAGATCGAAT................................................... 22 2 1 1.00 1 0 0 0 1 0 0
..........................................................................................TGTAAAGGGATCCAGATGGAATT.................................................. 23 1 1 1.00 1 1 0 0 0 0 0
............................................................................................TAAGGGGATCCAGATGGAACAT................................................. 22 3 1 1.00 1 1 0 0 0 0 0
........................................................................................CCTGTAAGGGGATCCAGATGGAAT................................................... 24 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGACGGAAT................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGAGGATCCGGATGGAAC................................................... 22 3 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGGTGGAA.................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..................................................TCCATCTAGATCCCATTACATA........................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0
...........................................................................................GTAAGAGGATCCAGATGGAAT................................................... 21 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCGGATTGAATC.................................................. 23 3 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGACCCAGATGGAATT.................................................. 23 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAAGGGATCCAGATGGAATC.................................................. 23 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................TTTAAGGGGATCCAGATGGAAC................................................... 22 2 1 1.00 1 1 0 0 0 0 0
...........................................................................................GTAACGGGATCCGGATGGAAT................................................... 21 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................GGTAAGGGGATCCAGATGGAAT................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGGTCCAGATGGAAC................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCACATGGAAT................................................... 22 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TTCAAGGGGATCCAGATGGAAT................................................... 22 2 1 1.00 1 0 0 0 0 1 0
..........................................................................................TGTAAGGGGATCCAGATG....................................................... 18 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGATGGAACT.................................................. 23 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTGAGGGGATCCGGATGGAGT................................................... 22 3 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCGGGTGGAAT................................................... 22 2 1 1.00 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGATGTA..................................................... 20 1 1 1.00 1 1 0 0 0 0 0
...........................................................................................GTAAGGGGATCCGGATGGAGTC.................................................. 22 3 2 0.50 1 1 0 0 0 0 0
..................................................TCCATCTGGATCCCATTACATC........................................................................................... 22 2 2 0.50 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCGGGTGGAAC................................................... 22 3 2 0.50 1 1 0 0 0 0 0
..........................................................................................TGTAATGGGATCCAGATGGAA.................................................... 21 1 2 0.50 1 1 0 0 0 0 0
...........................................................................................GTAAGGGGATCCGGATGGAGT................................................... 21 2 2 0.50 1 1 0 0 0 0 0
..........................................................................................TGTGAGGGGATCCAGATGGAAC................................................... 22 2 2 0.50 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGATCTAGATGGAA.................................................... 21 1 2 0.50 1 1 0 0 0 0 0
..........................................................................................TGTAAGGGGATCCAGAAT....................................................... 18 2 5 0.20 1 1 0 0 0 0 0
..................CATAACAGGCTCTGCTCTTG............................................................................................................................. 20 3 11 0.09 1 0 0 0 1 0 0

Anti-sense strand reads

TGCTAGATATATACAAGGGTATTGTCCCAGACGACGACCTCCAGATATCAAGGTAGATCTAGGGTAATGTATATGTTATAATGTTATGATACATTCCCCTAGGTCTACCTTAATAGCTAGAGTTCTTCGACTCAAACGATACCTAGTGTCACTTTATCAACTT

************************************((.((((((.((((((((((((.((((((.(((((((................))))))).)))))).)))))))))))).)))))).))..***********************************
Read size # Mismatch Hit Count Total Norm Total V110

male body
M046

female body

M060

embryo

V056

head

V049

head

V041

embryo

..................................................AGGTAGATCTAGGGTAATGTAT........................................................................................... 22 0 1 10.00 10 5 1 1 0 2 1
...................................................GGTAGATCTAGGGTAATGTAT........................................................................................... 21 0 1 9.00 9 3 2 3 1 0 0
..................................................TGGTAGATCTAGGGTAATGTAT........................................................................................... 22 1 1 9.00 9 8 1 0 0 0 0
........................................................................................ATACATTACCCTAGGTCTACCT..................................................... 22 1 2 4.00 8 4 2 2 0 0 0
......................................................................................TGATACATTCCCCTAGGTCTAC....................................................... 22 0 1 4.00 4 1 1 2 0 0 0
................................................CAAGGTAGATCTAGGGTAATGT............................................................................................. 22 0 1 3.00 3 3 0 0 0 0 0
.....................................................................................ATGATACATTCCCCTAGGTCTAC....................................................... 23 0 1 2.00 2 0 2 0 0 0 0
..................................................CGGTAGATCTAGGGTAATGTGT........................................................................................... 22 2 1 1.00 1 0 0 1 0 0 0
.......................................................................................GATACATTCCCCTAGGTCTAC....................................................... 21 0 1 1.00 1 0 1 0 0 0 0
...............................................TCAAGGTAGATCTAGGGTAATGT............................................................................................. 23 0 1 1.00 1 1 0 0 0 0 0
.................................ACGACCTCCAGATATCAAGG.............................................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0
.....................................................................................ATGATACATTCCCCTAGGTCT......................................................... 21 0 1 1.00 1 0 1 0 0 0 0
..................................................CGGTAGATCTAGGGTAATGTAT........................................................................................... 22 1 1 1.00 1 1 0 0 0 0 0
.....................................................................................ATGATACATTCCCCTAGGTCTA........................................................ 22 0 1 1.00 1 0 1 0 0 0 0
...............................................TCAAGGTAGATCTAGGGTAA................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0
........................................................................................ATACATTCCCCTAGGTCTTCCT..................................................... 22 1 1 1.00 1 0 0 1 0 0 0
...................................................GGTAGATCTAGGGTAATGTATA.......................................................................................... 22 0 1 1.00 1 0 0 0 1 0 0
.........................................................................................TACATTACCCTAGGTCTACCT..................................................... 21 1 2 1.00 2 1 1 0 0 0 0
..................................................AGGTAGATCTAGGGTAATGTA............................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0
..............................ACGACGACCTCCAGGTATCAA................................................................................................................ 21 1 1 1.00 1 0 1 0 0 0 0
.................................................AAGGTAGATCTAGGGTAATGTAT........................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0
..................................................AGGTGGATCTAGGGTAATGTAT........................................................................................... 22 1 1 1.00 1 0 0 0 1 0 0
................................................CAAGGTAGACCTAGGGTAATGT............................................................................................. 22 1 1 1.00 1 1 0 0 0 0 0
........................................................................................ATACATTCCCCTAGGTCTACCT..................................................... 22 0 1 1.00 1 0 0 1 0 0 0
.................................................AAGGTAGACCTAGGGTAATGT............................................................................................. 21 1 2 0.50 1 1 0 0 0 0 0
........................................................................................CTACATTACCCTAGGTCTACCT..................................................... 22 2 2 0.50 1 1 0 0 0 0 0
.................................................AAGGTAGATCTAGGGGAATGT............................................................................................. 21 1 2 0.50 1 1 0 0 0 0 0
.................................................................................................CCTAGCTCTACTTTTATAGC.............................................. 20 3 15 0.07 1 0 0 0 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droMoj3 scaffold_6308:1287527-1287689 + dmo_19 confident ACGATCTATATATGTTCCCATAACAGGGTCTGCTGCTGGAGGTCTATAGTTCCATCTAGATCCCATTACATATACAATATTACAATACTATGTAAGGGGATCCAGATGGAATTATCGATCTCAAGAAGCTGAGTTTGCTATGGATCACAGTGAAATAGTTGAA
droKik1 scf7180000302798:195250-195266 - G---TGTGTGTGTGTTTCCA-----------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
ACGATCTATATATGTTCCCATAACAGGGTCTGCTGCTGGAGGTCTATAGTTCCATCTAGATCCCATTACATATACAATATTACAATACTATGTAAGGGGATCCAGATGGAATTATCGATCTCAAGAAGCTGAGTTTGCTATGGATCACAGTGAAATAGTTGAASizeHit CountTotal NormTotalM046

Female-body
V041

Embryo
V049

Head
V056

Head
M060

Embryo
V110

Male-body
..........................................................................................TGTAAGGGGATCCAGATGGAAT...................................................2215080.00508048351625006
..........................................................................................TGTAAGGGGATCCAGATGGAATC..................................................231407.0040760000401
..........................................................................................TGTAAGGGGATCCAGATGGAATT..................................................231291.0029130000288
..........................................................................................TGTAAGGGGATCCAGATGGAA....................................................211284.0028440120277
..........................................................................................TGTAAGGGGATCCAGATGGAAC...................................................221163.0016300100162
...........................................................................................GTAAGGGGATCCAGATGGAAT...................................................211122.0012240000118
..........................................................................................TGTAAGGGGATCCAGATGGA.....................................................20132.00320001031
...........................................................................................GTAAGGGGATCCAGATGGAATC..................................................22130.00301000029
..........................................................................................TGTAAGGGGATCCAGATGGAATTC.................................................24119.00190000019
...........................................................................................GTAAGGGGATCCAGATGGAATT..................................................22118.00180000018
..........................................................................................TGTAAGGGGATCCAGATGGAATG..................................................23115.00151000014
..........................................................................................TGTAAGGGGATCCAGATGGAATA..................................................23113.00130000013
..........................................................................................TGTAAGGGGATCCAGATGGAAA...................................................22111.00110000011
...........................................................................................GTAAGGGGATCCAGATGGAAC...................................................2119.009000009
............................................................................................TAAGGGGATCCAGATGGAATTC.................................................2218.008000008
..........................................................................................TGTAAGGGGATCCAGATGG......................................................1918.008000008
..........................................................................................TGTAAGGGGATCCAGATGGAATTT.................................................2417.007000007
............................................................................................TAAGGGGATCCAGATGGAATTT.................................................2217.007000007
..........................................................................................TGTAAGGGGATCCAGATGGAG....................................................2116.006000006
...........................................................................................GTAAGGGGATCCAGATGGAA....................................................2015.005000005
..........................................................................................TGTAAGGGGATCCAGATGGAATTG.................................................2414.004000004
..........................................................................................TGTAAGGGGATCCAGATGGAAG...................................................2213.003000003
...........................................................................................GTAAGGGGATCCAGATGGAATA..................................................2213.003000003
..........................................................................................TGTAAGGGGATCCAGATGGAATAT.................................................2413.003000003
............................................................................................TAAGGGGATCCAGATGGAAT...................................................2012.002010001
............................................................................................TAAGGGGATCCAGATGGAA....................................................1912.002000002
..........................................................................................TGTAAGGGGATCCAGATGGAATTA.................................................2412.002000002
..................................................TCCATCTAGATCCCATTACATC...........................................................................................2212.002100001
...........................................................................................GTAAGGGGATCCAGATGGAATG..................................................2212.002000002
..............................................................................................AGGGGATCCAGATGGAAT...................................................1811.001000001
............................................................................................TAAGGGGATCCAGATGGAATT..................................................2111.001000001
..........................................................................................TGTAAGGGGATCCAGATGGTC....................................................2111.001000001
...........................................................................................GTAAGGGGATCCAGATGGAATTT.................................................2311.001000001
..........................................................................................TGTAAGGGGATCCAGATGGAATTTC................................................2511.001000001
..........................................................................................TGTAAGGGGATCCAGATGC......................................................1911.001000001
............................................................................................TAAGGGGATCCAGATGGAATGT.................................................2211.001000001
.............................................................................................AAGGGGATCCAGATGGAAC...................................................1911.001000001
..................................................TCCATCTAGATCCCATTACAT............................................................................................2111.001000001
..........................................................................................TGTAAGGGGATCCAGATGGAATCT.................................................2411.001000001
..........................................................................................TGTAAGGGGATCCAGATGGAACC..................................................2311.001000001
..........................................................................................TGTAAGGGGATCCAGATGGAAAA..................................................2311.001000001
..........................................................................................TGTAAGGGGATCCAGATGGC.....................................................2011.001000001
...........................................................................................GTAAGGGGATCCAGATGGA.....................................................1911.001000001
............................................................................................TAAGGGGATCCAGATGGAACAT.................................................2211.001000001
..................................................TCCATCTAGATCCCATTACATA...........................................................................................2211.001100000
..........................................................................................TGTAAGGGGATCCAGATG.......................................................1811.001000001
..........................................................................................TGTAAGGGGATCCAGAAT.......................................................1850.201000001
droKik1
G---TGTGTGTGTGTTTCCA-----------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads

Generated: 10/20/2015 at 07:28 PM