ID:

dmo_1850

 Coordinate:

scaffold_6540:7275695-7275845 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-5.1 -5.0 -4.9 -4.7

Flybase annnotation

exon [dmoj_GLEANR_9329:1]; CDS [Dmoj\GI24160-cds]; intron [Dmoj\GI24160-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CAGGACCCCCGAGGAAATGGAAGATATGCTACTGCCCAAGATATCAAAAAGTAATTATAGACTAAATATAATAAATAAAAACATAATCCTAGTTAATGTATATAACTTAACAAACTTTATGCATCTCAAAGAAGTGCTAACAAATAACAATAGAAACTACTACACATATACCCCTAGTTCCCTCAAACCTTACAACCTCATAATAAAAAAACTACCCCCAGCATGCTTTACACAAGCAGAAGTAAAAACAG
**************************************************************************************............................................((...(((............(((......))).............)))))..********************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body
............................................................................................................................................................CTACTACACATATACCCCTAGTTCCC..................................................................... 26 0 1 3.00 3 3 0 0
.....................................AAGATATCAAAAAGTAATTATAGAC............................................................................................................................................................................................. 25 0 1 2.00 2 2 0 0
.....................................AAGATATCAAAAAGTAATTATAGACTAAA......................................................................................................................................................................................... 29 0 1 1.00 1 1 0 0
............................................................................................................................................................CTACTACACATATACCCCTAGTTC....................................................................... 24 0 1 1.00 1 1 0 0
.....................................................................................................................................................ATAGAAACTACTACACATATACCCCTA........................................................................... 27 0 1 1.00 1 1 0 0
..........................................................................................................................................................AACTACTACACATATACCCCTAGTT........................................................................ 25 0 1 1.00 1 1 0 0
..............................................................................................................................................AATAACAATAGAAACTACTACACATA................................................................................... 26 0 1 1.00 1 1 0 0
..........................................................................................................................................................AACTACTACACATATACCCCTAGTTCCC..................................................................... 28 0 1 1.00 1 1 0 0
......................................................................................TCCTAGTTAATGTATATAACTTAACA........................................................................................................................................... 26 0 1 1.00 1 1 0 0
............................................................................................................................................................CTACTACACATATACCCCTAGTTCC...................................................................... 25 0 1 1.00 1 0 1 0
.....................................................................................................................................................ATAGAAACTACTACACATATACCC.............................................................................. 24 0 1 1.00 1 1 0 0
....................................................................................................TATAACTTAACAAACTTTATGCA................................................................................................................................ 23 0 1 1.00 1 1 0 0
...........................................................................................................................TCTCAAAGAAGTGCTAACAAATAACAAT.................................................................................................... 28 0 1 1.00 1 0 0 1
...........................................................................................................................TCTCAAAGAAGTGCTAACAAATAACA...................................................................................................... 26 0 1 1.00 1 1 0 0
.................................................................................................................................................................................................AACCTCATAATAAAAAAACTACCCG................................. 25 1 1 1.00 1 0 1 0
..........................................................................................................................................................AACTACTACACATATACCCCTAG.......................................................................... 23 0 1 1.00 1 1 0 0
..............................................................................................................................................................ACTACACATATACCCCTAGTTCCCTCA.................................................................. 27 0 1 1.00 1 1 0 0
..............................................................................................................................................................ACTACACATATACCCCTAGTTCCCTCAAA................................................................ 29 0 1 1.00 1 1 0 0
....................................CAAGATATCAAAAAGTAATTATAG............................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0
..................................................................................................................................GAAGTGCTAACAAATAACA...................................................................................................... 19 0 1 1.00 1 1 0 0
.........................................................................................................................................................................................................AATAAAAAAACTACGCACACC............................. 21 3 17 0.06 1 0 1 0

Anti-sense strand reads

GTCCTGGGGGCTCCTTTACCTTCTATACGATGACGGGTTCTATAGTTTTTCATTAATATCTGATTTATATTATTTATTTTTGTATTAGGATCAATTACATATATTGAATTGTTTGAAATACGTAGAGTTTCTTCACGATTGTTTATTGTTATCTTTGATGATGTGTATATGGGGATCAAGGGAGTTTGGAATGTTGGAGTATTATTTTTTTGATGGGGGTCGTACGAAATGTGTTCGTCTTCATTTTTGTC
*********************************************************************............................................((...(((............(((......))).............)))))..************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 M060
embryo
 V056
head
.........................................................................................................GAATTGTTTGAAATACGTAGAGTTTCTT...................................................................................................................... 28 0 1 10.00 10 5 4 1 0
.....................TCTATACGATGACGGGTTCTATAGTT............................................................................................................................................................................................................ 26 0 1 9.00 9 7 1 0 1
......................CTATACGATGACGGGTTCTATAGT............................................................................................................................................................................................................. 24 0 1 9.00 9 9 0 0 0
....................CTCTATACGATGACGGGTTCTATAGT............................................................................................................................................................................................................. 26 1 1 6.00 6 6 0 0 0
.....................TCTATACGATGACGGGTTCTATAGT............................................................................................................................................................................................................. 25 0 1 6.00 6 6 0 0 0
.......................TATACGATGACGGGTTCTATAGTT............................................................................................................................................................................................................ 24 0 1 5.00 5 5 0 0 0
............................................................................................................TTGTTTGAAATACGTAGAGTTTCTT...................................................................................................................... 25 0 1 5.00 5 5 0 0 0
....................................................................................................................................................................................GGAGTTTGGAATGTTGGAGTATTAT.............................................. 25 0 1 4.00 4 3 1 0 0
.......................TATACGATGACGGGTTCTATAGT............................................................................................................................................................................................................. 23 0 1 4.00 4 3 0 1 0
......................CTATACGATGACGGGTTCTATAGTT............................................................................................................................................................................................................ 25 0 1 4.00 4 3 1 0 0
...................CTTCTATACGATGACGGGTTCTATAGT............................................................................................................................................................................................................. 27 0 1 4.00 4 4 0 0 0
.......................................................................................................................................CGATTGTTTATTGTTATCTTTGAT............................................................................................ 24 0 1 3.00 3 3 0 0 0
..........................................................................................................................................................................GGGGATCAAGGGAGTTTGGAATGTT........................................................ 25 0 1 2.00 2 1 1 0 0
....................CTCTATACGATGACGGGTTCTATAGTT............................................................................................................................................................................................................ 27 1 1 2.00 2 2 0 0 0
.........................................................................................................................................................................TGGGGATCAAGGGAGTTTGGAATGT......................................................... 25 0 1 2.00 2 1 1 0 0
.........................................................................................................GAATTGTTTGAAATACGTAGAGTTTCT....................................................................................................................... 27 0 1 2.00 2 1 1 0 0
....................................................................................................................................TCACGATTGTTTATTGTTATCTTTGAT............................................................................................ 27 0 1 2.00 2 2 0 0 0
.......................................................................................................................................................................................GTTTGGAATGTTGGAGTATTATTTT........................................... 25 0 1 2.00 2 2 0 0 0
.................................................................................................................................................TTGTTATCTTTGATGATGTGTAT................................................................................... 23 0 1 2.00 2 1 1 0 0
...................................................................................................................................................................................GGGAGTTTGGAATGTTGGAGTATT................................................ 24 0 1 2.00 2 1 1 0 0
........................................................................................................................................................................................TTTGGAATGTTGGAGTATTATTTTTTT........................................ 27 0 1 2.00 2 2 0 0 0
....................................................................................................................................................................................GGAGTTTGGAATGTTGGAGTATTATTT............................................ 27 0 1 2.00 2 1 1 0 0
.....................TCTATACGATGACGGGTTCTATAG.............................................................................................................................................................................................................. 24 0 1 2.00 2 2 0 0 0
..............................................................................................................................................TTATTGTTATCTTTGATGATGTGTAT................................................................................... 26 0 1 2.00 2 1 1 0 0
................................................................................................................................................................................CAAGGGAGTTTGGAATGTTGGAGTATT................................................ 27 0 1 2.00 2 0 2 0 0
...........................................................................................................ATTGTTTGAAATACGTAGAGTTTCTT...................................................................................................................... 26 0 1 2.00 2 2 0 0 0
......................................................................................................CTTGAATTGTTTGAAATACGTAGAGT........................................................................................................................... 26 1 1 1.00 1 0 1 0 0
........................................................................................................................................................................................TTTGGAATGTTGGAGTATTATTTTT.......................................... 25 0 1 1.00 1 1 0 0 0
......................................................................................................................................................................................AGTTTGGAATGTTGGAGTATTATTTT........................................... 26 0 1 1.00 1 1 0 0 0
..............................................................................................................................................................................................................................TACGAAATGTGTTCGTCTTCATTTT.... 25 0 1 1.00 1 1 0 0 0
......................CTATACGATGACGGGTTCTATAG.............................................................................................................................................................................................................. 23 0 1 1.00 1 1 0 0 0
........................................................................................................................................................................ATGGGGATCAAGGGAGTTTGGAATG.......................................................... 25 0 1 1.00 1 0 1 0 0
.......................................................................................................................................................................................................................GGGGTCGTACGAAATGTGTTCGT............. 23 0 1 1.00 1 1 0 0 0
..............................................................................................................................................................CGATGTGTATATGGGGATCAAGGGAGT.................................................................. 27 1 1 1.00 1 0 1 0 0
...........................................................................................................................................................................GGGATCAAGGGAGTTTGGAATGT......................................................... 23 0 1 1.00 1 0 1 0 0
......................................................................................................................................................................................AGTTTGGAATGTTGGAGTATT................................................ 21 0 1 1.00 1 1 0 0 0
...........................................................................................................ATTGTTTGAAATACGTAGAGTT.......................................................................................................................... 22 0 1 1.00 1 1 0 0 0
..................................................................................................................................................................................................................TGATGGGGGTCGTACGAAATGTGTT................ 25 0 2 1.00 2 0 2 0 0
...............CTACCTTCTATACGATGACGGGTTCTA................................................................................................................................................................................................................. 27 1 1 1.00 1 1 0 0 0
......................................................................................................................................................ATCTTTGATGATGTGTATATGGGGAT........................................................................... 26 0 1 1.00 1 0 1 0 0
........................................................................................................CGAATTGTTTGAAATACGTAGAGTTTCTT...................................................................................................................... 29 1 1 1.00 1 1 0 0 0
....................................................................................................................................................CTATCTTTGATGATGTGTATATGGGGAT........................................................................... 28 1 1 1.00 1 0 1 0 0
................................................................................TGTATTAGGATCAATTACATAT..................................................................................................................................................... 22 0 1 1.00 1 0 0 1 0
......................................................................TATTTATTTTTGTATTAGGATCAATT........................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0
..........................................................................................................................................................................GGGGATCAAGGGAGTTTGGAATGT......................................................... 24 0 1 1.00 1 1 0 0 0
..................................................................ATATTATTTATTTTTGTATTAGGATCAAT............................................................................................................................................................ 29 0 1 1.00 1 1 0 0 0
....................CTCTATACGATGACGGGTTCTATAG.............................................................................................................................................................................................................. 25 1 1 1.00 1 1 0 0 0
................................................................................................................................................ATTGTTATCTTTGATGATGTGTAT................................................................................... 24 0 1 1.00 1 0 1 0 0
.............................................................................................................................................TTTATTGTTATCTTTGATGATGTGT..................................................................................... 25 0 1 1.00 1 1 0 0 0
.....................................................................CTATTTATTTTTGTATTAGGATCAATT........................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0
..............................................................................................................................................TTATTGTTATCTTTGATGATGTGT..................................................................................... 24 0 1 1.00 1 1 0 0 0
.........................................................................................................GAATTTTTTGAAATACGTAGAGTTTCTT...................................................................................................................... 28 1 1 1.00 1 1 0 0 0
........................ATACGATGACGGGTTCTATAGTT............................................................................................................................................................................................................ 23 0 1 1.00 1 0 0 1 0
......................................................................................................................................................................................................................GGGGGTCGTACGAAATGTGTTCGT............. 24 0 1 1.00 1 1 0 0 0
...........................................................................................................................................TGTTTATTGTTATCTTTGATGATGTG...................................................................................... 26 0 1 1.00 1 1 0 0 0
.....................................................................................................................................................AATCTTTGATGATGTGTATATGGGGAT........................................................................... 27 1 1 1.00 1 0 1 0 0
.................................................................................................................................TCTTCACGATTGTTTATTGTTATCT................................................................................................. 25 0 1 1.00 1 1 0 0 0
....................................................................................................................................................................................GGAGTTTGGAATGTTGGAGTATTATT............................................. 26 0 1 1.00 1 0 1 0 0
...................................................................................................................................................................................GGGAGTTTGGAATGTTGGAGTAT................................................. 23 0 1 1.00 1 0 1 0 0
......GGGGCTCCTTTACCTTCTATACGAT............................................................................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0
................................................................................TGTATTAGGATCAATTACATATATT.................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0
........................................................................................................................................................................ATGGGGATCAAGGGAGTTTGGAATGT......................................................... 26 0 1 1.00 1 1 0 0 0
............................................................................TTTTTGTATTAGGATCAATT........................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0
.............................................................................................................TGTTTGAAATACGTAGAGTTTCTT...................................................................................................................... 24 0 1 1.00 1 0 0 1 0
.......................................................................................................................................................TCTTTGATGATGTGTATATGGGGAT........................................................................... 25 0 1 1.00 1 1 0 0 0
....................TTCTATACGATGACGGGTTCTATAGT............................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0
...............................................................................................................................CTTCTTCACGATTGTTTATTGTTATCT................................................................................................. 27 1 1 1.00 1 0 1 0 0
...................................................................................................................................................................................GGGAGTTTGGAAGGTTGGAGTATT................................................ 24 1 1 1.00 1 1 0 0 0
...............................................................................................................................................................................................................................ACGAAATGTGTTCGTCTTCATTTTT... 25 0 1 1.00 1 1 0 0 0
......................CTATACGATGACGGGTTCTATAGTTT........................................................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0
............................................................................................................CTGTTTGAAATACGTAGAGTTTCTT...................................................................................................................... 25 1 1 1.00 1 1 0 0 0
.........................................................................................................GAATTGTTTGAAATACGTAGAGTTT......................................................................................................................... 25 0 1 1.00 1 0 1 0 0
..........................................................................................................................................................................GGGGATCAAGGGAGTTTGGAAT........................................................... 22 0 1 1.00 1 0 1 0 0
.......................TATACGATGACGGGTTCTATAGTTT........................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0
.........................TACGATGACGGGTTCTATAGT............................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0
..................................GGGTTCTATAGTTTTTCATTAATATCT.............................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0
..............................................................................................................................................................................................................................TCCGAGATGTGTTCGTCTTCCTT...... 23 3 1 1.00 1 1 0 0 0
.........................................................................................................GAATTGTTTGAAATACTTAGAGTTTCTT...................................................................................................................... 28 1 1 1.00 1 1 0 0 0
...........................................................................................................................AGAGTTTCTTCACGATTGTTTATTGT...................................................................................................... 26 0 1 1.00 1 1 0 0 0
.....GGGGGCTCCTTTACCTTCTATACGAT............................................................................................................................................................................................................................ 26 0 1 1.00 1 1 0 0 0
...............................................................................................................................................................................................TGTTGGAGTATTATTTTTTTGAT..................................... 23 0 1 1.00 1 1 0 0 0
...............................................................................................................................................................GATGTGTATATGGGGATCAAGGGAGTT................................................................. 27 0 1 1.00 1 0 1 0 0
...........................................................................................................................AGAGTTTCTTCACGATTGTTTATTGTT..................................................................................................... 27 0 1 1.00 1 1 0 0 0
................................................................................................................................................................CTGTGTATATGGGGATCAAGGGAGT.................................................................. 25 1 1 1.00 1 0 1 0 0
...............................GACGGGTTCTATAGTTTTTCAT...................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0
................................................................................................................................................................................................GTTGGAGTATTATTTTTTTGAT..................................... 22 0 1 1.00 1 1 0 0 0
................................................................................................................................................................................CAAGGGAGTTTGGAATGTTGGAGTAT................................................. 26 0 1 1.00 1 0 1 0 0
.....................................................................................................................................................................................GAGTTTGGAATGTTGGAGTATTAT.............................................. 24 0 1 1.00 1 1 0 0 0
..........................................................................................................AATTGTTTGAAATACGTAGAGTTTCTT...................................................................................................................... 27 0 1 1.00 1 1 0 0 0
......................................................................................................................................................................................................................GGGGGTCGTACGAAATGTGTT................ 21 0 2 0.50 1 1 0 0 0
...................................................................................................................................................................................................................GATGGGGGTCGTACGAAATGTGTT................ 24 0 2 0.50 1 1 0 0 0
....................................................................................................................................................................................................................ATGGAGGTCGTCCGAAGTG.................... 19 3 16 0.13 2 0 2 0 0
..................................................................................................................................................TGATATGTTGGATGATGTGT..................................................................................... 20 3 10 0.10 1 0 1 0 0
.....................................................................................................................................................................................................................................TGTGTTCGTCTTCCTTTTG... 19 2 13 0.08 1 1 0 0 0
....................................GTTCTATAGGCTTTCATTAC................................................................................................................................................................................................... 20 3 13 0.08 1 0 0 0 1
................................................................................................................TTGTAATACGTAGCGTTCC........................................................................................................................ 19 3 17 0.06 1 0 1 0 0
..................................................................................................................................................TGATATCTTTGATGATGTATT.................................................................................... 21 3 18 0.06 1 0 0 0 1
.........................................................................................................................................................................TAGGGAACAAGGCAGTTT................................................................ 18 3 20 0.05 1 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6540:7275645-7275895 + dmo_1850 CAGGA---------------CCCCCGAGGAAATGGAAGATATGCTACTGCCCAAGATATCAAAAAGTAATTATAGACTAAATATAATAAATAAAAACATAATCCTAGTTAATGTATATAACTTAACAAACTTTATGCATCTCAAAGAAGTGCTAACAAATAACAATAGAAACTACTACACATATACCCCTAGTTCCCTCAAACCTTACAACCTCATAATAAAAAAACTACCCCCAGCATGCT---------------------------------------------------------------------------------------------------------------------------------------------------TTACACA--------------------------------------------------------AGCAGAAGTAAAAACAG
droVir3 scaffold_12473:11571-11821 + dvi_1088 TGTGA---------------ATCCAAAGGAACTGACAGGTATGTTGCGACAAATAATAAAAAATGAGCGTTTTAGACTTAATATAATCAACAAAAATAGAACCCATATCAATGTCTTTACCCTCGAAGATTTCCAAGAGACTAAGAAACTATTAGACCTTAATCAAATAAGCTACTATACTTACACCCCCAAAGAACTTAAGCCTTACTCCATAGTTATAAAAAAATTACCTCAGCAAATCT---------------------------------------------------------------------------------------------------------------------------------------------------TCACAGA--------------------------------------------------------AGATGAAGTTAAGATAG
droGri2 scaffold_14624:1708912-1709176 - TTTGA---------------GCCTG-TGTAAGAAGAAGAGAAAGAATGAGCAAATAAA--------------------------------------------------------------------TAATTTAATAATAATTCAACTGAAACCAGAAAAAAAGAA--AGAAAAGCA-----AAAA-----------------------ACAAAC--------------ACATTATGTAAGCATAAAAACATTTAAAGCGAGAGCTAAACAACAACACAGCATCCC----------------------ACAACACAAACACACACACACACATACACACACAAACACACAC------------AC---------ACACACACACACACACACAACACATAATAAGTTTAAACAAACAAAA---------------------------------AAAATACAAACAAACAA
droWil2 scf2_1100000004884:30354-30604 - CCAAA---------------ATGCAAAAGAAATTGTCGGTAAGTTGAGCAAATTCATACCAGATCAAAAGTTTACCATTAATGTAATAAATAAAAATCTCATGCACATACAAGTTTTCAATCTAGAAGACTTTGAGAAAACCAAATATTTTTTCAAAAGCCTCAACCAAAACTTCTATTCATACACCCCAAAAGAACTGAAACCACATAGTGTAATAATAAAGAAACTACCTCAGACAGTAT---------------------------------------------------------------------------------------------------------------------------------------------------ATGAGGC--------------------------------------------------------ACAAGAAATACAATCAG
dp5 2:17091383-17091633 - TGTAA---------------ACACTAAACAAATGGTGCATAGAATCACTAACATTATTAAATCTAAGAATTTCACACTCAATATTAAGAATAAGAATCTAGTTTATGTACAGTTAAGAAACCTAAACGATTATCAACTAATTATAAGTACACTAAATACAGAAAATGTACACTATTACACATACACACACAAAAATCTCAAACCAATTTCATTACTAATCAAAAAGCTACCCACCAACGTAT---------------------------------------------------------------------------------------------------------------------------------------------------AGGATTC--------------------------------------------------------GCAGGAGATTCAATCGG
droPer2 scaffold_647:2351-2601 + TGTAA---------------ACACTTAACAAATGGTGCATAGAATCACAAACATTATTAAATCTAAGAACTTTACACTCAATATTAAGAATAAGAATCTAGTTTATGTACAGTGAAGAAACCTAAACGATTATCAACTAATTATAAGTACACTAAACACAGAAAATGTACACTATTACACATACACACCCAAAGATCTCAAACCAATTTCATTATTAATCAAAAAGCTACCCACCAACGTAT---------------------------------------------------------------------------------------------------------------------------------------------------ACGATTC--------------------------------------------------------GCAGGAAATTCAATCGG
droAna3 scaffold_13499:1047870-1048120 - CCAAA---------------ATCCTAAAGTATTAAATAATATAATGTATACTAATTTCAATCGTAAGAATTATAGGTTAAACTTAATTAATAAGAACATAACCCATATCCAAACTTTTGAACTAAGCGAATTTGAAAAAACAAAAGAAATTTTACTGGAGAAAAAAGTCCTTTTCTTCTCTTATACACCTAAACAGTACAAACCCCATAATATTATAATAAAAAAAATACCCCCCTCAATTT---------------------------------------------------------------------------------------------------------------------------------------------------ACAACGA--------------------------------------------------------AAGTGAGATAACATTAG
droBip1 scf7180000396631:1174-1420 + CATTGTCCTATATAATGCGGACATAAAACAACTGAGAGAAACCATCT---------------GTGGTAAGTATAGCCTTAACTTAATAAATAAAAATTTTACACATTTAAAACTTTTCACCCTTGAAAACCTGGATAAAGTACAAAGTACTCTTACACAAAACAAAATTATGTACTTCACGTA----CCCAAGCAATTCAAACCCCACTCAATAATCATAAAAAAACTACGCGTAAACATAT---------------------------------------------------------------------------------------------------------------------------------------------------TTACGCT--------------------------------------------------------CAATGAAATCCAACTAG
droKik1 scf7180000302792:5405-5640 + CTTAG---------------ATGCTAAGAAAATTAAAAACCTCATAC---------------CATTTAAGCACACCCTAAATATAATAAATAAAAATATTATCCATATTAAAACATATAAGCTAGAAAATCTAAATGCAGCAAAAAATATATTAACAAGCAACAAAGCACTGTACTTCACATACACGCCAAAACAACTAAAACCACACAACATTATAATTAAGAAAATACCCCCAGAAATAT---------------------------------------------------------------------------------------------------------------------------------------------------TTGACAA--------------------------------------------------------AAATGAGATTAAACAAG
droFic1 scf7180000452562:2938-3173 + TATAA---------------ACCCTAAACAACTAAAAACCTTATTTA---------------ATTTTAAGTACACGCTTAACATAATCAACAAAAATATAATCCACCTCAAAGTGTTCACAATAGAAACATTAGAAATAGCCAAAAATATCATTGCTGAAAATCACCTTCACTTTTTTACATACACCCCTAAACAATTAAAACCTCATAATATTATCATTAAAAAAATACCTGGCCTAGTAT---------------------------------------------------------------------------------------------------------------------------------------------------TCAACAA--------------------------------------------------------AGACGAAGTACTTACCG
droEle1 scf7180000490970:1113424-1113673 + TCAAA---------------ACCCAAAACTATTACAAATCGCCTTAAAAATTGTTATTAAACCAACAGAATTTATATTAAACATTATAAATAAGAATAGAATTAATGTAA-GTTATTCTCTCTAGACCATTTTGAAAATGTAAAAAAACTCATGACTGAACGCAAAATGAGTTATTTCTCTTATACACCCAAACAACTCAAACCTCACACTATCATCTTAAAAAAACTTCCCCCAAGCGTTT---------------------------------------------------------------------------------------------------------------------------------------------------ACGAAGG--------------------------------------------------------AGCAGAAATAAAGAAAG
droRho1 scf7180000779513:67875-68110 + CGAAA---------------ATCCTTCAAAACTAAAAGGTATATTTA---------------ACTATAAGTTTAATTTAAACATATTAAATAAAAATTATACCCATATTACAAATTTCTCCCTCAAAACTCTCGAAAAAACCAAAACAATACTGTCAAAAAATAAAATGAACTTCTTTACATACACACCCAAACAAATAAAGCCACACAACATAATAATAAAAAAAATTCCTCCTTTATTAT---------------------------------------------------------------------------------------------------------------------------------------------------TTAATAA--------------------------------------------------------AGAGGAAGTAGAAAACG
droBia1 scf7180000301158:16459-16607 + TACAA---------------ATGTTGAGAAAATAGAAAATAAAAGCATAGGATCTGAA--------------------------------------------------------------------AAATCGCAAAAAATTGTTATAGATATTAATGATAGTGAGGCAGAATTTCGAAACGTAAG-----------------------TCAAGCACC-----------------------------------------------------------------------------------------------------------------------------------------TAAAATA----------AGTTATACATCTC-------AATGA--------------------------------------------------------TAGTGATAC----CGAA
droTak1 scf7180000410783:5461-5708 - TGCAG---------------AACCAAAAACATTAACAGGTATGTTGCAAAATTTTATTAAGGACAACAAGTTTATCCTAAATATAATAAACAAAAACATAATCCATGTCAAGGTATTCTGCCTAGAACACTACCAACAAACAAAAGAATTACTGTCAAAAAATAAAGCTAAATTCTTTTCATATACCCCCAAAGAACGAAAACCGCACTCAATAGTCCTTAAAAGACTCCCTCTTGATGTCT---------------------------------------------------------------------------------------------------------------------------------------------------TCCAAGT--------------------------------------------------------AGATGACATA---CTAA
droEug1 scf7180000409063:8826-9061 - CGAAA---------------ATGCTAAGAAAGTAAGATCCATAATGA---------------CCAGCAAATTTAACCTAAATATCATAAACAAAAACGTCATACATATAAAAGTTTTTACTATGGATAATCTCATCCATACCAAAAATACACTAACAAAAAATAATATGTTATTCTTTACGTACACTCCTAAGCACCTTAAACCCCATAATATAATTATAAAAAAAATACCTCCCTCATCAT---------------------------------------------------------------------------------------------------------------------------------------------------TTGATTG--------------------------------------------------------TAACGATATAAAAAACG
dm3 chrX:14304612-14304713 - AAATG---------------CATATAAGTATA-----------------AAAAAAATCAAAACTAATT-TATAGAACTTAAT---------------------------------------------------------------------------------------------------------------------------------TTTGTAGTTAACAACTTATATTAGATAATAT---------------------------------------------------------------------------------------------------------------------------------------------------TAAA--A--------------------------------------------------------ACTTGTAAACAAACTCT
droSim2 3l:16641459-16641586 - TCAGA---------------CACAGATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACACTGCAGTGCTGCAACCACAGAGCGCAAAAAAGAAGTAATTTAAAGTTATATATACCTGCATATATATAAATATAAATCAAATAAAGTACATATTACATATTTGTGTATTTC-------------------------------------------------------------------------------------
droSec2 scaffold_0:9118826-9118982 - TCAGA---------------CACAGATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACACTGCAGTGCTGCAACCACAGAGCGCAAAAAAGAAGTAATTTAAAGTTATATATACCTGCATATATATAAATATAAATCAAATAAAGTACATATTACATATTTGTGTATTTCCACAT------------------------GCAAGAA--------------------------------AAACAGAGACAACTGCA
droYak3 3L:17013169-17013366 + CACAG---------------ACACACACACACATACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACACTGCAATGCTGCAACCACAGAGCGCAAAAAAGAAGTAATTTAAAGTTATATATACCTGCATATATATAAATATAAATCAAATAAAGTACATATTACATATTTGTGTATTTCCACAT------------------------GCAAGAAAAACCGAGAGAACTGCAAGAGCAACAAACAATAAACCAAACACACATAT
droEre2 scaffold_4784:16783709-16783897 + CAAAA---------------CACACACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATACTGCAGTGCTGCAACCACAGAGCGCAAAAAAGAAGTAATTTAAAGTTATATATACCTGCATATATATAAATATAAATCAAATAAAGTACATATTACATATTTGTGTATTTCCACAT------------------------GCAAGAAAAACCGAGAGAACTGCAAGAGCAACAAACAATAAACCAAACACACATAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
CAGGA---------------CCCCCGAGGAAATGGAAGATATGCTACTGCCCAAGATATCAAAAAGTAATTATAGACTAAATATAATAAATAAAAACATAATCCTAGTTAATGTATATAACTTAACAAACTTTATGCATCTCAAAGAAGTGCTAACAAATAACAATAGAAACTACTACACATATACCCCTAGTTCCCTCAAACCTTACAACCTCATAATAAAAAAACTACCCCCAGCATGCT---------------------------------------------------------------------------------------------------------------------------------------------------TTACACA--------------------------------------------------------AGCAGAAGTAAAAACAGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................................................................................................................................................................CTACTACACATATACCCCTAGTTCCC................................................................................................................................................................................................................................................................................2613.003300000
....................................................AAGATATCAAAAAGTAATTATAGAC........................................................................................................................................................................................................................................................................................................................................................................................................2512.002200000
....................................................AAGATATCAAAAAGTAATTATAGACTAAA....................................................................................................................................................................................................................................................................................................................................................................................................2911.001100000
...........................................................................................................................................................................CTACTACACATATACCCCTAGTTC..................................................................................................................................................................................................................................................................................2411.001100000
....................................................................................................................................................................ATAGAAACTACTACACATATACCCCTA......................................................................................................................................................................................................................................................................................2711.001100000
.........................................................................................................................................................................AACTACTACACATATACCCCTAGTT...................................................................................................................................................................................................................................................................................2511.001100000
.............................................................................................................................................................AATAACAATAGAAACTACTACACATA..............................................................................................................................................................................................................................................................................................2611.001100000
.........................................................................................................................................................................AACTACTACACATATACCCCTAGTTCCC................................................................................................................................................................................................................................................................................2811.001100000
.....................................................................................................TCCTAGTTAATGTATATAACTTAACA......................................................................................................................................................................................................................................................................................................................................................2611.001100000
...........................................................................................................................................................................CTACTACACATATACCCCTAGTTCC.................................................................................................................................................................................................................................................................................2511.001000010
....................................................................................................................................................................ATAGAAACTACTACACATATACCC.........................................................................................................................................................................................................................................................................................2411.001100000
...................................................................................................................TATAACTTAACAAACTTTATGCA...........................................................................................................................................................................................................................................................................................................................................2311.001100000
..........................................................................................................................................TCTCAAAGAAGTGCTAACAAATAACAAT...............................................................................................................................................................................................................................................................................................................2811.001000001
..........................................................................................................................................TCTCAAAGAAGTGCTAACAAATAACA.................................................................................................................................................................................................................................................................................................................2611.001100000
................................................................................................................................................................................................................AACCTCATAATAAAAAAACTACCCG............................................................................................................................................................................................................................................2511.001000010
.........................................................................................................................................................................AACTACTACACATATACCCCTAG.....................................................................................................................................................................................................................................................................................2311.001100000
.............................................................................................................................................................................ACTACACATATACCCCTAGTTCCCTCA.............................................................................................................................................................................................................................................................................2711.001100000
.............................................................................................................................................................................ACTACACATATACCCCTAGTTCCCTCAAA...........................................................................................................................................................................................................................................................................2911.001100000
...................................................CAAGATATCAAAAAGTAATTATAG..........................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.................................................................................................................................................GAAGTGCTAACAAATAACA.................................................................................................................................................................................................................................................................................................................1911.001100000
droVir3
TGTGA---------------ATCCAAAGGAACTGACAGGTATGTTGCGACAAATAATAAAAAATGAGCGTTTTAGACTTAATATAATCAACAAAAATAGAACCCATATCAATGTCTTTACCCTCGAAGATTTCCAAGAGACTAAGAAACTATTAGACCTTAATCAAATAAGCTACTATACTTACACCCCCAAAGAACTTAAGCCTTACTCCATAGTTATAAAAAAATTACCTCAGCAAATCT---------------------------------------------------------------------------------------------------------------------------------------------------TCACAGA--------------------------------------------------------AGATGAAGTTAAGATAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................................................................................................................CAAGAGACTAAGAAACTATTAGA.........................................................................................................................................................................................................................................................................................................................23269.001380010100000000000000000081664619102004064840300000000000000000000000
.........................AAGGAACTGACAGGTATGTTGCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................23341.33124001010400050100000001008663624500110121821000000000000000000000000
.........................AAGGAACTGACAGGTATGTTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................22340.67122000001123026000000000000372331841123034700100000000000000000000000
.........................AAGGAACTGACAGGTATGTTGCGA....................................................................................................................................................................................................................................................................................................................................................................................................................................24338.33115000004400100000000000003273420222330022400000000000000000000000020
.....................................................................................................................................CAAGAGACTAAGAAACTATTAGACC.......................................................................................................................................................................................................................................................................................................................25233.006610000330000000000000000031207124022020501000000000000000000000000
.....................................................................................................................................CAAGAGACTAAGAAACTATTAGACCT......................................................................................................................................................................................................................................................................................................................26230.00609001000010100000000000002026962001000100010000000000000000000000
.........................AAGGAACTGACAGGTATGTTGCGACA..................................................................................................................................................................................................................................................................................................................................................................................................................................26329.3388000001100010200000000001322419000030042610000000000000000000000000
.....................................................................................................................................CAAGAGACTAAGAAACTATTAGACCTT.....................................................................................................................................................................................................................................................................................................................27226.505300000200000000000000210012211100013032400000000000000000000000000
.........................AAGGAACTGACAGGTATGTTGCGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................25324.00721000000000120200000000000322210120030001310000000000000000000000000
.........................AAGGAACTGACAGGTATGTTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................21320.67620000103001301000000000050120853021010340000000000000000000000000
.....................................................................................................................................CAAGAGACTAAGAAACTATTAGAC........................................................................................................................................................................................................................................................................................................................24216.5033000010000000000000001002329614001010100100000000000000000000000
......................................................................................................................................AAGAGACTAAGAAACTATTAGACCT......................................................................................................................................................................................................................................................................................................................25212.0024100000000000000000000000000100000000000011213121220101100210000
.........................AAGGAACTGACAGGTATGTTGCGACAA.................................................................................................................................................................................................................................................................................................................................................................................................................................27312.00360000002000000000000000001097110110101200000000000000000000000000
.........................AAGGAACTGACAGGTATGTTGCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................25311.67350000101011110200000000000106700001001020000000000000000000000000
.....................................................................................................................................CAAGAGACTAAGAAACTATTAG..........................................................................................................................................................................................................................................................................................................................2229.5019000000100000100000000002216401001000000000000000000000000000000
.....................................................................................................................................CAAGAGACTAAGAAACTATTAGAT........................................................................................................................................................................................................................................................................................................................2429.0018000000001000000000000001026200000000402000000000000000000000000
.........................AAGGAACTGACAGGTATGTTGCGT....................................................................................................................................................................................................................................................................................................................................................................................................................................2438.6726000000000020000000000000028610002000410000000000000000000000000
.........................AAGGAACTGACAGGTATGTTGCGACAAA................................................................................................................................................................................................................................................................................................................................................................................................................................2836.6720000000000000000000000000107500000000700000000000000000000000000
..................................................................................................................................................................................................................CATAGTTATAAAAAAATTACCTCAGCA........................................................................................................................................................................................................................................2726.5013001000000000100000000001304001000011000000000000000000000000000
................................................................................ATATAATCAACAAAAATAGAACCCATA..........................................................................................................................................................................................................................................................................................................................................................................2726.00120000000000000000000000000110010000000000000000000000000000000000
................................................................................ATATAATCAACAAAAATAGAACCC.............................................................................................................................................................................................................................................................................................................................................................................2425.5011000000000000000000000000118001000000000000000000000000000000000
..................................................................................................................................................................................................................CATAGTTATAAAAAAATTACCTCAGC.........................................................................................................................................................................................................................................2625.0010000002000000000000000000032002100000000000000000000000000000000
.........................AAGGAACTGACAGGTATGTTGCGATT..................................................................................................................................................................................................................................................................................................................................................................................................................................2633.6711000000000000000000000002003400000000020000000000000000000000000
.....................................................................................................................................CAAGAGACTAAGAAACTATT............................................................................................................................................................................................................................................................................................................................2023.507000001000000000000000002101100000001000000000000000000000000000
................................................................................ATATAATCAACAAAAATAGAACCCA............................................................................................................................................................................................................................................................................................................................................................................2523.507000000000000000000000000004021000000000000000000000000000000000
.........................AAGGAACTGACAGGTATGTT........................................................................................................................................................................................................................................................................................................................................................................................................................................2033.009000000000100000000000000012300000000200000000000000000000000000
................................................................................ATATAATCAACAAAAATAGAACCCAT...........................................................................................................................................................................................................................................................................................................................................................................2623.006000000000000000000000000101020000010010000000000000000000000000
....................ATCCAAAGGAACTGACAGGTATGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2432.678000000000000100000000000003101000000100000000000000000000000010
................................................................................ATATAATCAACAAAAATAGAACC..............................................................................................................................................................................................................................................................................................................................................................................2322.505000000000000000000000000005000000000000000000000000000000000000
.........................AAGGAACTGACAGGTATGTTGCGATC..................................................................................................................................................................................................................................................................................................................................................................................................................................2632.337000000100010000000000001001100010000010000000000000000000000000
..................................................................................................................................................................................................................CATAGTTATAAAAAAATTACCTCAG..........................................................................................................................................................................................................................................2522.004000000000000000000000000001021000000000000000000000000000000000
.....................................................................................................................................CAAGAGACTAAGAAACTATTAGACCTTA....................................................................................................................................................................................................................................................................................................................2822.004000000000000000000000000003100000000000000000000000000000000000
......................................................................................................................................AAGAGACTAAGAAACTATTAGACC.......................................................................................................................................................................................................................................................................................................................2422.004000000000000000000000000001001010000000000000000000000000100000
......................................................................................................................................AAGAGACTAAGAAACTATTAGACCTT.....................................................................................................................................................................................................................................................................................................................2622.004100000000000000000000000000101000000100000000000000000000000000
.........................AAGGAACTGACAGGTATGTTGCGTT...................................................................................................................................................................................................................................................................................................................................................................................................................................2532.006000000000040000000000000000100000000100000000000000000000000000
....................ATCCAAAGGAACTGACAGGTATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................2332.006000010000000000000002001001000000000100000000000000000000000000
......................................................................................................................................AAGAGACTAAGAAACTATTAGA.........................................................................................................................................................................................................................................................................................................................2221.503000000000000000000000000002100000000000000000000000000000000000
........................................................................................................................................GAGACTAAGAAACTATTAGACCTTA....................................................................................................................................................................................................................................................................................................................2521.503000000000000000000000000000000000000300000000000000000000000000
.....................................................................................................................................CAAGAGACTAAGAAACTATTAGATTG......................................................................................................................................................................................................................................................................................................................2621.503000000000000000000000000002000001000000000000000000000000000000
......................................................................................................................................AAGAGACTAAGAAACTATTAGAC........................................................................................................................................................................................................................................................................................................................2321.503000000000000000000000000001100000000000000000000000000000010000
.........................AAGGAACTGACAGGTATGTTGCGTTT..................................................................................................................................................................................................................................................................................................................................................................................................................................2631.334000000200000100000000000001000000000000000000000000000000000000
.........................AAGGAACTGACAGGTATGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................1931.334000000000110100000000000001000000000000000000000000000000000000
.........................AAGGAACTGACAGGTATGTTGCGAA...................................................................................................................................................................................................................................................................................................................................................................................................................................2531.334000000000000000000000000002100000001000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................A--------------------------------------------------------AGATGAAGTTAAGATAG1831.003000000000030000000000000000000000000000000000000000000000000000
........................................................................................................................................GAGACTAAGAAACTATTAGACCTT.....................................................................................................................................................................................................................................................................................................................2421.002000000000000000000000000000200000000000000000000000000000000000
........................AAAGGAACTGACAGGTATGTTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................2331.003000000000010000000000000001100000000000000000000000000000000000
.....................................................................................................................................CAAGAGACTAAGAAACTATTAGAATG......................................................................................................................................................................................................................................................................................................................2621.002000000000000000000000000001100000000000000000000000000000000000
....................ATCCAAAGGAACTGACAGGTA............................................................................................................................................................................................................................................................................................................................................................................................................................................2131.003000000000000000000000000002000000000010000000000000000000000000
.....................................................................................................................................CAAGAGACTAAGAAACTATTAGAGT.......................................................................................................................................................................................................................................................................................................................2521.002000000000000000000000000001000000001000000000000000000000000000
..................................................................................................................................................................................................................CATAGTTATAAAAAAATTACCTCAGCT........................................................................................................................................................................................................................................2721.002000000000000100000000000000000000000010000000000000000000000000
...........................GGAACTGACAGGTATGTTGCGACAAA................................................................................................................................................................................................................................................................................................................................................................................................................................2631.003000000000000000000000000100100010000000000000000000000000000000
.............................................................................................................................................................................ACTATACTTACACCCCCAAAG...................................................................................................................................................................................................................................................................................2121.002000000000000000000000000000001010000000000000000000000000000000
.....................................................................................................................................CAAGAGACTAAGAAACTATTAGACA.......................................................................................................................................................................................................................................................................................................................2521.002000000000000000000000000010000000000010000000000000000000000000
.....................................................................................................................................CAAGAGACTAAGAAACTATTAGATA.......................................................................................................................................................................................................................................................................................................................2521.002000000000000000000000001001000000000000000000000000000000000000
.........................AAGGAACTGACAGGTATGTTGCTT....................................................................................................................................................................................................................................................................................................................................................................................................................................2431.003000010000000000000000000001000000000010000000000000000000000000
......................................................................TTTAGACTTAATATAATCAACAAAAA.....................................................................................................................................................................................................................................................................................................................................................................................2631.003000000000000000000000000000200000000100000000000000000000000000
..................................................................................................................................................................................................................CATAGTTATAAAAAAATTACCTCAGCAAA......................................................................................................................................................................................................................................2921.002000000000000000000000000001010000000000000000000000000000000000
.........................AAGGAACTGACAGGTATGTTGCGACC..................................................................................................................................................................................................................................................................................................................................................................................................................................2631.003000000000000000000000000000001020000000000000000000000000000000
......................................................................................................................................AAGAGACTAAGAAACTATTAGACCTTA....................................................................................................................................................................................................................................................................................................................2721.002000000000000000000000000002000000000000000000000000000000000000
.........................AAGGAACTGACAGGTATGTTGCGACAT.................................................................................................................................................................................................................................................................................................................................................................................................................................2731.003000000000000000000000000011000000000100000000000000000000000000
.GTGA---------------ATCCAAAGGAACTGACAGGTATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2721.002200000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................CAAGAGACTAAGAAACTATTAGATT.......................................................................................................................................................................................................................................................................................................................2521.002000000000000000000000000000100000001000000000000000000000000000
......................................................................TTTAGACTTAATATAATCAACAAAA......................................................................................................................................................................................................................................................................................................................................................................................2531.003000010000000000000000000000200000000000000000000000000000000000
.........................................................................................................................................................................................CCCCCAAAGAACTTAAGCCTTACTCC..................................................................................................................................................................................................................................................................2631.003300000000000000000000000000000000000000000000000000000000000000
................................................................................ATATAATCAACAAAAATAGAACCCATAT.........................................................................................................................................................................................................................................................................................................................................................................2821.002000000000000000000000000002000000000000000000000000000000000000
....................ATCCAAAGGAACTGACAGGTATGTTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................2631.003000000000000000000000000001101000000000000000000000000000000000
.........................AAGGAACTGACAGGTATGTTGCT.....................................................................................................................................................................................................................................................................................................................................................................................................................................2330.672000000000000000000000000100100000000000000000000000000000000000
.............................................GCGACAAATAATAAAAAATGAGCG................................................................................................................................................................................................................................................................................................................................................................................................................2430.672000000000020000000000000000000000000000000000000000000000000000
.......................CAAAGGAACTGACAGGTATGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2130.672000000002000000000000000000000000000000000000000000000000000000
.........................AAGGAACTGACAGGTATGTTGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................2330.672000000000000000000000000000100000000100000000000000000000000000
...............................CTGACAGGTATGTTGCGACAAA................................................................................................................................................................................................................................................................................................................................................................................................................................2230.672000000000000000000000000000000000000000000000000000000000000020
........................AAAGGAACTGACAGGTATGTTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................2230.672001000000000000000000000000000100000000000000000000000000000000
............................GAACTGACAGGTATGTTGCGACAAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................2630.672000000000000000000000000011000000000000000000000000000000000000
.........................AAGGAACTGACAGGTATGTTGCGAG...................................................................................................................................................................................................................................................................................................................................................................................................................................2530.672000000000000000000001000000000000000100000000000000000000000000
...............................CTGACAGGTATGTTGCGACAAATAA.............................................................................................................................................................................................................................................................................................................................................................................................................................2530.672000000000000000000000000010001000000000000000000000000000000000
.....................................................................................................................................CAAGAGACTAAGAAACTAT.............................................................................................................................................................................................................................................................................................................................1930.672000000000000000000000000001000001000000000000000000000000000000
............................................................AAATGAGCGTTTTAGACTTAAT...................................................................................................................................................................................................................................................................................................................................................................................................2230.672020000000000000000000000000000000000000000000000000000000000000
..............................ACTGACAGGTATGTTGCGACAAA................................................................................................................................................................................................................................................................................................................................................................................................................................2330.672000000000000000000000000002000000000000000000000000000000000000
...............................CTGACAGGTATGTTGCGACAAAT...............................................................................................................................................................................................................................................................................................................................................................................................................................2330.672000000000000000000000000001000000000100000000000000000000000000
.............................................GCGACAAATAATAAAAAATGAGC.................................................................................................................................................................................................................................................................................................................................................................................................................2330.672000000000000000000000000000000010000100000000000000000000000000
.........................AAGGAACTGACAGGTATGTTGCGTA...................................................................................................................................................................................................................................................................................................................................................................................................................................2530.672000000000000000000000000002000000000000000000000000000000000000
...............................................................................................................................................................................TATACTTACACCCCCAAAGAACTTAATT..........................................................................................................................................................................................................................................................................2820.501000000000000000000000000000000000000010000000000000000000000000
.....................................................................................................................................CAAGAGACTAAGAAACTATTAGACCC......................................................................................................................................................................................................................................................................................................................2620.501100000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................CAAGAGACTAAGAAACTATTAGAATC......................................................................................................................................................................................................................................................................................................................2620.501000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................ACTATACTTACACCCCCAAAGAA.................................................................................................................................................................................................................................................................................2320.501000000000000000000000000000010000000000000000000000000000000000
..................................................................................................................................TTCCAAGAGACTAAGAAACTATTAGACC.......................................................................................................................................................................................................................................................................................................................2820.501000000000000000000000000000000000000100000000000000000000000000
........................................................................................................................................GAGACTAAGAAACTATTAGA.........................................................................................................................................................................................................................................................................................................................2020.501000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................................................ACTATACTTACACCCCCAAAGAACT...............................................................................................................................................................................................................................................................................2520.501000000000000000000000000000001000000000000000000000000000000000
.................................................................................TATAATCAACAAAAATAGAACCCATA..........................................................................................................................................................................................................................................................................................................................................................................2620.501001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................TATCAATGTCTTTACCCTCGAAGA....................................................................................................................................................................................................................................................................................................................................................2420.501000000000000000000000000000010000000000000000000000000000000000
............................................................................................................................................................................TACTATACTTACACCCCCAAAGAAC................................................................................................................................................................................................................................................................................2520.501001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................CAAGAGACTAAGAAACTATTAGAAT.......................................................................................................................................................................................................................................................................................................................2520.501000000000000000000000000001000000000000000000000000000000000000
...................................................................................................................................................................................................................ATAGTTATAAAAAAATTACCTCAGCA........................................................................................................................................................................................................................................2620.501001000000000000000000000000000000000000000000000000000000000000
..................................................................................ATAATCAACAAAAATAGAACCCATAT.........................................................................................................................................................................................................................................................................................................................................................................2620.501000000000000000000000000001000000000000000000000000000000000000
....................................................................................................ACCCATATCAATGTCTTTACCCTCG........................................................................................................................................................................................................................................................................................................................................................2520.501000000000000000000000000000100000000000000000000000000000000000
..................................................................................................................................................................................................................CATAGTTATAAAAAAATTACCT.............................................................................................................................................................................................................................................2220.501000000000000000000000000000000000001000000000000000000000000000
.....................................................................................................................................CAAGAGACTAAGAAACTATTAGACCTTT....................................................................................................................................................................................................................................................................................................................2820.501000000000000000000000000000100000000000000000000000000000000000
................................................................................ATATAATCAACAAAAATAGAACCCAATG.........................................................................................................................................................................................................................................................................................................................................................................2820.501000000000000000000000000001000000000000000000000000000000000000
.....................................................................................................................................CAAGAGACTAAGAAACTATTAGATAA......................................................................................................................................................................................................................................................................................................................2620.501000000000000000000000000010000000000000000000000000000000000000
.............................................................................................................................AAGATTTCCAAGAGACTAAGAAACTATT............................................................................................................................................................................................................................................................................................................................2820.501000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................CAAGAGACTAAGAAACTATTAGATG.......................................................................................................................................................................................................................................................................................................................2520.501000000000000000000000000001000000000000000000000000000000000000
.............................................................................................................................................................CTTAATCAAATAAGCTACTATACT................................................................................................................................................................................................................................................................................................2420.501000000000000000000000000000010000000000000000000000000000000000
..................................................................................ATAATCAACAAAAATAGAACCCAT...........................................................................................................................................................................................................................................................................................................................................................................2420.501000000000000000000000000001000000000000000000000000000000000000
.....................................................................................................................................CAAGAGACTAAGAAACTATTAGACCTC.....................................................................................................................................................................................................................................................................................................................2720.501000000000000000000000000010000000000000000000000000000000000000
..................................................................................................................................................................................................................CATAGTTATAAAAAAATTACCTC............................................................................................................................................................................................................................................2320.501000000000000000000000000000010000000000000000000000000000000000
.....................................................................................................................................CAAGAGACTAAGAAACTATTAGAG........................................................................................................................................................................................................................................................................................................................2420.501000000000000000000000000000000000000001000000000000000000000000
......................................................................................................................................AAGAGACTAAGAAACTATTAG..........................................................................................................................................................................................................................................................................................................................2120.501000000000000000000000000000000000000000001000000000000000000000
..................................................................................................................................................................................................................CATAGTTATAAAAAAATTACCTCAGCAA.......................................................................................................................................................................................................................................2820.501000010000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................CTATTAGACCTTAATCATT..............................................................................................................................................................................................................................................................................................................1920.501001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................TCAATGTCTTTACCCTCGAA......................................................................................................................................................................................................................................................................................................................................................2020.501000000000000000000000000000010000000000000000000000000000000000
......................................................................................................................................AAGAGACTAAGAAACTATTAGT.........................................................................................................................................................................................................................................................................................................................2220.501000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................TAGACCTTAATCAAATAAGCTACTA....................................................................................................................................................................................................................................................................................................2520.501001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................TCCATAGTTATAAAAAAATTACCTCA...........................................................................................................................................................................................................................................2620.501001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................TCAAATAAGCTACTATACTTACACCC.........................................................................................................................................................................................................................................................................................2620.501000000000000000000000000000010000000000000000000000000000000000
..TGA---------------ATCCAAAGGAACTGACAGGTATGTT........................................................................................................................................................................................................................................................................................................................................................................................................................................2820.501000000000000000000000000001000000000000000000000000000000000000
.....................................................................................................................................CAAGAGACTAAGAAACTATTAGACCTTAT...................................................................................................................................................................................................................................................................................................................2920.501000000000000000000000000000100000000000000000000000000000000000
................................................................................ATATAATCAACAAAAATAGAACCCATC..........................................................................................................................................................................................................................................................................................................................................................................2720.501000000000000000000000000100000000000000000000000000000000000000
.....................................................................................................................................CAAGAGACTAAGAAACTATTAGAAG.......................................................................................................................................................................................................................................................................................................................2520.501000010000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................TAAGCTACTATACTTACACCCCC.......................................................................................................................................................................................................................................................................................2320.501000000000000000000000000000010000000000000000000000000000000000
.....................................................................................................................................CAAGAGACTAAGAAACTATTAGACT.......................................................................................................................................................................................................................................................................................................................2520.501000000000000000000000000001000000000000000000000000000000000000
...............................................................................................................................................................................TATACTTACACCCCCAAAGAACTTAAGCC.........................................................................................................................................................................................................................................................................2920.501000100000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................TTAAGCCTTACTCCATAGTTATAAAAAAA...................................................................................................................................................................................................................................................2920.501000010000000000000000000000000000000000000000000000000000000000
.........................................................................................................TATCAATGTCTTTACCCTCGAA......................................................................................................................................................................................................................................................................................................................................................2220.501000000000000000000000000000000000000010000000000000000000000000
......................................................................TTTAGACTTAATATAATCAACAAAAATC...................................................................................................................................................................................................................................................................................................................................................................................2830.331000000000000000000000000000100000000000000000000000000000000000
.........................AAGGAACTGACAGGTATG..........................................................................................................................................................................................................................................................................................................................................................................................................................................1830.331000000000000000000000000000000001000000000000000000000000000000
........................AAAGGAACTGACAGGTATGTTGCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................2430.331000000000000000000000000001000000000000000000000000000000000000
.........................................................................................................................................................................................CCCCCAAAGAACTTAAGCCTT.......................................................................................................................................................................................................................................................................2130.331000000000000000000000000000000000000000000000000000000100000000
...........................................TTGCGACAAATAATAAAAAATGAGC.................................................................................................................................................................................................................................................................................................................................................................................................................2530.331000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................................................................AGCAAATCT---------------------------------------------------------------------------------------------------------------------------------------------------TCACAGA--------------------------------------------------------AGATG............2130.331000010000000000000000000000000000000000000000000000000000000000
......................................................................TTTAGACTTAATATAATCAACAAAC......................................................................................................................................................................................................................................................................................................................................................................................2530.331000000000000000000000000000100000000000000000000000000000000000
.......................................................................TTAGACTTAATATAATCAACAAAAATAGA.................................................................................................................................................................................................................................................................................................................................................................................2930.331001000000000000000000000000000000000000000000000000000000000000
......................CCAAAGGAACTGACAGGTATGTTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................2530.331000000000000000000000000001000000000000000000000000000000000000
....................ATCCAAAGGAACTGACAGGTATGTT........................................................................................................................................................................................................................................................................................................................................................................................................................................2530.331000000000000000000000000001000000000000000000000000000000000000
................................................ACAAATAATAAAAAATGAGCGTTTTAG..........................................................................................................................................................................................................................................................................................................................................................................................................2730.331000000000000000000000000001000000000000000000000000000000000000
......................................................................TTTAGACTTAATATAATCAAC..........................................................................................................................................................................................................................................................................................................................................................................................2130.331000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................................................................................................................................TCT---------------------------------------------------------------------------------------------------------------------------------------------------TCACAGA--------------------------------------------------------AGATGAAGTT.......2030.331000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................ATTTCCAAGAGACTAAGAAACTAT.............................................................................................................................................................................................................................................................................................................................2430.331000010000000000000000000000000000000000000000000000000000000000
......................................................................................................................ACCCTCGAAGATTTCCAAGAGACT.......................................................................................................................................................................................................................................................................................................................................2430.331000000000000000000000000000100000000000000000000000000000000000
......................CCAAAGGAACTGACAGGTATGTTGCGA....................................................................................................................................................................................................................................................................................................................................................................................................................................2730.331000000000000000000000000000000000000100000000000000000000000000
.........................AAGGAACTGACAGGTATGTTGCGACAC.................................................................................................................................................................................................................................................................................................................................................................................................................................2730.331000000000000000000000000001000000000000000000000000000000000000
.........................AAGGAACTGACAGGTATGTTGCGTAT..................................................................................................................................................................................................................................................................................................................................................................................................................................2630.331000000000000100000000000000000000000000000000000000000000000000
.........................AAGGAACTGACAGGTATGTTGCGACG..................................................................................................................................................................................................................................................................................................................................................................................................................................2630.331000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................AGATTTCCAAGAGACTAAGAAAC................................................................................................................................................................................................................................................................................................................................2330.331000000000000000000000000000000000000100000000000000000000000000
........................AAAGGAACTGACAGGTATGTTGCCC....................................................................................................................................................................................................................................................................................................................................................................................................................................2530.331000000100000000000000000000000000000000000000000000000000000000
........................................ATGTTGCGACAAATAATAAAAAATGA...................................................................................................................................................................................................................................................................................................................................................................................................................2630.331000000000000000000000000000100000000000000000000000000000000000
....................ATCCAAAGGAACTGACAGGTAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................2230.331000000000000000000000000001000000000000000000000000000000000000
..........................AGGAACTGACAGGTATGTTGCGA....................................................................................................................................................................................................................................................................................................................................................................................................................................2330.331000010000000000000000000000000000000000000000000000000000000000
....................ATCCAAAGGAACTGACAGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................2030.331000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................AAGATTTCCAAGAGACTAAGAAACTA..............................................................................................................................................................................................................................................................................................................................2630.331000000000000000000000000001000000000000000000000000000000000000
.....................................................................................................................................CAAGAGACTAAGAAACTA..............................................................................................................................................................................................................................................................................................................................1830.331000000000000000000000000001000000000000000000000000000000000000
..........................AGGAACTGACAGGTATGTTGCGACAAA................................................................................................................................................................................................................................................................................................................................................................................................................................2730.331000000000000000000000000001000000000000000000000000000000000000
...............................CTGACAGGTATGTTGCGACAAATA..............................................................................................................................................................................................................................................................................................................................................................................................................................2430.331000000000000000000000000000100000000000000000000000000000000000
.........................AAGGAACTGACAGGTATGTTGCGACATT................................................................................................................................................................................................................................................................................................................................................................................................................................2830.331000000000000000000000000000000000000100000000000000000000000000
............................GAACTGACAGGTATGTTGCGACA..................................................................................................................................................................................................................................................................................................................................................................................................................................2330.331001000000000000000000000000000000000000000000000000000000000000
.............................AACTGACAGGTATGTTGCGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................2130.331000000001000000000000000000000000000000000000000000000000000000
.......................................................................TTAGACTTAATATAATCAACAAAAA.....................................................................................................................................................................................................................................................................................................................................................................................2530.331001000000000000000000000000000000000000000000000000000000000000
..........................AGGAACTGACAGGTATGTTGCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................2230.331000000000000000000000000000000000000010000000000000000000000000
................................TGACAGGTATGTTGCGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................1830.331000000000000000000000000000001000000000000000000000000000000000
.........................AAGGAACTGACAGGTATGTTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................2230.331000000000000000000000000000000000000100000000000000000000000000
..................................................................GCGTTTTAGACTTAATATAATCAACA.........................................................................................................................................................................................................................................................................................................................................................................................2630.331000000000000000000000000000000100000000000000000000000000000000
.........................AAGGAACTGACAGGTATGTTGCGATG..................................................................................................................................................................................................................................................................................................................................................................................................................................2630.331000000000000000000000000010000000000000000000000000000000000000
..........................................................AAAAATGAGCGTTTTAGACTT......................................................................................................................................................................................................................................................................................................................................................................................................2130.331000000000000000000000000100000000000000000000000000000000000000
..........................................................................................................................................................................................CCCCAAAGAACTTAAGCCTTACTC...................................................................................................................................................................................................................................................................2430.331000000000000000000000000100000000000000000000000000000000000000
.....................................................TAATAAAAAATGAGCGTTTTAGACTTA.....................................................................................................................................................................................................................................................................................................................................................................................................2730.331000000000000000000000000000010000000000000000000000000000000000
...........................................................AAAATGAGCGTTTTAGACTTA.....................................................................................................................................................................................................................................................................................................................................................................................................2130.331000000000000000000000000000000000000001000000000000000000000000
......................................................................TTTAGACTTAATATAATCAACAA........................................................................................................................................................................................................................................................................................................................................................................................2330.331000000000000000000000000000100000000000000000000000000000000000
..............................ACTGACAGGTATGTTGCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................1830.331000000000000000000000000000000000000100000000000000000000000000
......................................................................TTTAGACTTAATATAATCAACATT.......................................................................................................................................................................................................................................................................................................................................................................................2430.331000000000000000000000000000100000000000000000000000000000000000
......................................................................TTTAGACTTAATATAATCAA...........................................................................................................................................................................................................................................................................................................................................................................................2030.331000000000000000000000000000000010000000000000000000000000000000
.........................AAGGAACTGACAGGTATGTTGCGACAAT................................................................................................................................................................................................................................................................................................................................................................................................................................2830.331000000000000000000000000001000000000000000000000000000000000000
...............................CTGACAGGTATGTTGCGACAAATAATA...........................................................................................................................................................................................................................................................................................................................................................................................................................2730.331000000000000000000000000000000000000000000000000000000000000010
..................................ACAGGTATGTTGCGACAA.................................................................................................................................................................................................................................................................................................................................................................................................................................1830.331000000000000000000000000001000000000000000000000000000000000000
........................AAAGGAACTGACAGGTATGTTGCGAT...................................................................................................................................................................................................................................................................................................................................................................................................................................2630.331000000000000000000000000000000000000100000000000000000000000000
...............................CTGACAGGTATGTTGCGACA..................................................................................................................................................................................................................................................................................................................................................................................................................................2030.331000000000000000000000000000000000000001000000000000000000000000
.........................AAGGAACTGACAGGTATGTTGCGAAT..................................................................................................................................................................................................................................................................................................................................................................................................................................2630.331000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................AAGATTTCCAAGAGACTAAGA...................................................................................................................................................................................................................................................................................................................................2130.331000000000000000000000000001000000000000000000000000000000000000
.........................AAGGAACTGACAGGTATGTTGCGTG...................................................................................................................................................................................................................................................................................................................................................................................................................................2530.331000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................TCACAGA--------------------------------------------------------AGATGAAGTTAAGA...2130.331000000000000000000000000000000000000000000000000000000000001000
.........................AAGGAACTGACAGGTATGTTGCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................2330.331000000000000000000000000000000000000000000000000000000000000010
...............................CTGACAGGTATGTTGCGACAA.................................................................................................................................................................................................................................................................................................................................................................................................................................2130.331000000000000000000000000000000010000000000000000000000000000000
.........................AAGGAACTGACAGGTATGTTGCCC....................................................................................................................................................................................................................................................................................................................................................................................................................................2430.331000000000000000000000000000000000000000000000000000000000000010
.....................TCCAAAGGAACTGACAGGTATGTTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................2630.331000000000000000000000000000000000000000100000000000000000000000
........................AAAGGAACTGACAGGTATGTT........................................................................................................................................................................................................................................................................................................................................................................................................................................2130.331000000000000000000000000000010000000000000000000000000000000000
....................ATCCAAAGGAACTGACAGGTATGTTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................2730.331000000000000000000000000000000000000100000000000000000000000000
.....................................................TAATAAAAAATGAGCGTTTTAGACTTAA....................................................................................................................................................................................................................................................................................................................................................................................................2830.331000000000000000000000000001000000000000000000000000000000000000
.........................AAGGAACTGACAGGTATGTTGCGACAG.................................................................................................................................................................................................................................................................................................................................................................................................................................2730.331000000000000000000000000001000000000000000000000000000000000000
.....................................................................................................................TACCCTCGAAGATTTCCAAGAGACTAAG....................................................................................................................................................................................................................................................................................................................................2830.331000000000000000000000000000000000000000000000000000000000000010
....................ATCCAAAGGAACTGACAGGTATC..........................................................................................................................................................................................................................................................................................................................................................................................................................................2330.331000000000000000000000000000010000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................CAGA--------------------------------------------------------AGATGAAGTTAAGAA..1940.251000000000000010000000000000000000000000000000000000000000000000
droGri2
TTTGA---------------GCCTG-TGTAAGAAGAAGAGAAAGAATGAGCAAATAAA--------------------------------------------------------------------TAATTTAATAATAATTCAACTGAAACCAGAAAAAAAGAA--AGAAAAGCA-----AAAA-----------------------ACAAAC--------------ACATTATGTAAGCATAAAAACATTTAAAGCGAGAGCTAAACAACAACACAGCATCCC----------------------ACAACACAAACACACACACACACATACACACACAAACACACAC------------AC---------ACACACACACACACACACAACACATAATAAGTTTAAACAAACAAAA---------------------------------AAAATACAAACAAACAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..............................AGAAGAAGAGAAAGAATGAGCAAAT..............................................................................................................................................................................................................................................................................................................................................................................................................................2511.00110
...........................................................................................................................................................................................................................................................................ACAACAACACAGCATCCC----------------------ACA...............................................................................................................................................................2111.00110
.............................................................................................................................................................................................................................................................AAAGCGAGAGCTAAACAACAACACA...............................................................................................................................................................................................2511.00110
......................................................................................................................................................ACCAGAAAAAAAGAA--AGA...........................................................................................................................................................................................................................................................................................................1811.00110
.....................................................................................................................................................................................................................................................................................................................................CACACATACACACACAAACACACA........................................................................................................................24150.13220
........................................................................................................................................................................................................................................................................................................................ACAAACACACACACACACATACAC.....................................................................................................................................24200.05110
.......................................................................................................................................................................................................................................................................................................................................................CACACAC------------AC---------ACACACACACACACACACAA............................................................................29200.05110
droWil2
CCAAA---------------ATGCAAAAGAAATTGTCGGTAAGTTGAGCAAATTCATACCAGATCAAAAGTTTACCATTAATGTAATAAATAAAAATCTCATGCACATACAAGTTTTCAATCTAGAAGACTTTGAGAAAACCAAATATTTTTTCAAAAGCCTCAACCAAAACTTCTATTCATACACCCCAAAAGAACTGAAACCACATAGTGTAATAATAAAGAAACTACCTCAGACAGTAT---------------------------------------------------------------------------------------------------------------------------------------------------ATGAGGC--------------------------------------------------------ACAAGAAATACAATCAGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................................................TACCAGATCAAAAGTTTACCATTAATG..................................................................................................................................................................................................................................................................................................................................................................................................2751.00504010
...........................................................................................................................................................................................................................AAAGAAACTACCTCAGACAGTAT---------------------------------------------------------------------------------------------------------------------------------------------------................................................................................2330.67202000
................................................CAAATTCATACCAGATCAAAAGTT.............................................................................................................................................................................................................................................................................................................................................................................................................2440.50200020
......................................................................................................................................................TTTCAAAAGCCTCAACCAAAACTTCTAT...................................................................................................................................................................................................................................................................................................2820.50101000
.........................................................................................................................................................................AACTTCTATTCATACACCCCAA......................................................................................................................................................................................................................................................................................2220.50101000
..............................................AGCAAATTCATACCAGATCAAAAG...............................................................................................................................................................................................................................................................................................................................................................................................................2440.50202000
..................................................................................................................................................................................................................TGTAATAATAAAGAAACTACCTCAGACA.......................................................................................................................................................................................................................................2830.33101000
.........................................................................................................................................................................................................................................AGACAGTAT---------------------------------------------------------------------------------------------------------------------------------------------------ATGAGGC--------------------------------------------------------ACAAGA...........2260.33200020
..........................................................................................................................................................................................CCCAAAAGAACTGAAACCACATAGTG.................................................................................................................................................................................................................................................................2630.33101000
................................................................................................................................................................................................AGAACTGAAACCACATAGTGTAATA............................................................................................................................................................................................................................................................2530.33100010
.....................................................................................................................CAATCTAGAAGACTTTGAGAAAACCAAA....................................................................................................................................................................................................................................................................................................................................2830.33101000
...............................................................................................................................................................................TATTCATACACCCCAAAAGAAC................................................................................................................................................................................................................................................................................2230.33101000
..................................................................................................................TTTCAATCTAGAAGACTTTGAGAAAACCA......................................................................................................................................................................................................................................................................................................................................2930.33101000
.......................................................................................................................................................................................................................................TCAGACAGTAT---------------------------------------------------------------------------------------------------------------------------------------------------ATGAGGC--------------------------------------------------------ACAAGAAA.........2660.33201010
........................................AAGTTGAGCAAATTCATACCAGATC....................................................................................................................................................................................................................................................................................................................................................................................................................2540.25101000
..............................................AGCAAATTCATACCAGATCAAAAGT..............................................................................................................................................................................................................................................................................................................................................................................................................2540.25101000
..............................................AGCAAATTCATACCAGATCAAAAGTT.............................................................................................................................................................................................................................................................................................................................................................................................................2640.25100010
.....................................................TCATACCAGATCAAAAGTTTACCAT.......................................................................................................................................................................................................................................................................................................................................................................................................2550.20100010
...........................................................CAGATCAAAAGTTTACCATTAATG..................................................................................................................................................................................................................................................................................................................................................................................................2450.20101000
.................................................AAATTCATACCAGATCAAAAGTTTACCAT.......................................................................................................................................................................................................................................................................................................................................................................................................2950.20101000
.................................TGTCGGTAAGTTGAGCAAATTCA.............................................................................................................................................................................................................................................................................................................................................................................................................................2350.20100010
...................................TCGGTAAGTTGAGCAAATTC..............................................................................................................................................................................................................................................................................................................................................................................................................................2050.20101000
...................................................................................................CATGCACATACAAGTTTTCAATCTA.........................................................................................................................................................................................................................................................................................................................................................2550.20101000
..............................AATTGTCGGTAAGTTGAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................2050.20100010
........................................................TACCAGATCAAAAGTTTACCATTAAT...................................................................................................................................................................................................................................................................................................................................................................................................2650.20100010
..................................................................................GTAATAAATAAAAATCTCATGCACA..........................................................................................................................................................................................................................................................................................................................................................................2550.20100010
..................................GTCGGTAAGTTGAGCAAATTCA.............................................................................................................................................................................................................................................................................................................................................................................................................................2250.20101000
.................................TGTCGGTAAGTTGAGCAAATTCATA...........................................................................................................................................................................................................................................................................................................................................................................................................................2550.20100010
..AAA---------------ATGCAAAAGAAATTGTCGGTAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................2660.17101000
........................................................................................................................................................................................................................................CAGACAGTAT---------------------------------------------------------------------------------------------------------------------------------------------------ATGAGGC--------------------------------------------------------ACAAGA...........2360.17101000
....................ATGCAAAAGAAATTGTCGGTAAGTTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................2660.17101000
CCAAA---------------ATGCAAAAGAAATTGTCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................2360.17101000
.......................................................................................................................................................................................................................................TCAGACAGTAT---------------------------------------------------------------------------------------------------------------------------------------------------ATGAGGC--------------------------------------------------------ACAAGA...........2460.17100100
.....................TGCAAAAGAAATTGTCGGTAAGTTGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................2760.17100010
....................ATGCAAAAGAAATTGTCGGTAAGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................2460.17101000
....A---------------ATGCAAAAGAAATTGTCGGTAAGTT........................................................................................................................................................................................................................................................................................................................................................................................................................................2660.17101000
........................................................................................................................................................................................................................................CAGACAGTAT---------------------------------------------------------------------------------------------------------------------------------------------------ATGAGGC--------------------------------------------------------ACAAG............2260.17101000
CCAAA---------------ATGCAAAAGAAATTGTCGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................2460.17101000
...................................................................................................................................................................................................................................TACCTCAGACAGTAT---------------------------------------------------------------------------------------------------------------------------------------------------ATGAGGC--------------------------------------------------------ACAAGA...........2860.17101000
CCAAA---------------ATGCAAAAGAAATTGTCGGTAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................2760.17101000
dp5
TGTAA---------------ACACTAAACAAATGGTGCATAGAATCACTAACATTATTAAATCTAAGAATTTCACACTCAATATTAAGAATAAGAATCTAGTTTATGTACAGTTAAGAAACCTAAACGATTATCAACTAATTATAAGTACACTAAATACAGAAAATGTACACTATTACACATACACACACAAAAATCTCAAACCAATTTCATTACTAATCAAAAAGCTACCCACCAACGTAT---------------------------------------------------------------------------------------------------------------------------------------------------AGGATTC--------------------------------------------------------GCAGGAGATTCAATCGGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...............................................................................................................................................................................................................................................TAT---------------------------------------------------------------------------------------------------------------------------------------------------AGGATTC--------------------------------------------------------GCAGGAGATTCAATCGG27210.502101000006140
.......................................................................................................................ACCTAAACGATTATCAACTAATTA......................................................................................................................................................................................................................................................................................................................................2417.0070200000500
............................................................................................................................................................................................................................................ACGTAT---------------------------------------------------------------------------------------------------------------------------------------------------AGGATTC--------------------------------------------------------GCAGGAGATT.......2326.501300000010120
..........................................................................................TAAGAATCTAGTTTATGTACAGTTA..................................................................................................................................................................................................................................................................................................................................................................2514.0040000000400
............................................................................................................................................................................................................................................ACGTAT---------------------------------------------------------------------------------------------------------------------------------------------------AGGATTC--------------------------------------------------------GCAGGAGATC.......2323.0060000000060
.......................................................................................................................ACCTAAACGATTATCAACTAATT.......................................................................................................................................................................................................................................................................................................................................2313.0030000000300
............................................................................................................................................................................................................................................ACGTAT---------------------------------------------------------------------------------------------------------------------------------------------------AGGATTC--------------------------------------------------------GCAGGAGA.........2123.0060000000150
..........................................................................................................................TAAACGATTATCAACTAATTATAAGTAC...............................................................................................................................................................................................................................................................................................................................2813.0030000000030
.................................................................................................................................................................................................................................................T---------------------------------------------------------------------------------------------------------------------------------------------------AGGATTC--------------------------------------------------------GCAGGAGATTCAATCGG2523.0060100000140
............................................................................................................................................................................................................................................ACGTAT---------------------------------------------------------------------------------------------------------------------------------------------------AGGATTC--------------------------------------------------------GCAGGAGATTC......2422.0040000000040
.......................................................................................................................................................................................................................................CACCAACGTAT---------------------------------------------------------------------------------------------------------------------------------------------------AGGATTC--------------------------------------------------------GCAG.............2222.0040000000310
...............................................................................................................................................................................................................................................TAT---------------------------------------------------------------------------------------------------------------------------------------------------AGGATTC--------------------------------------------------------GCAGGAGATTCAA....2322.0040000000220
...............................................................................................................................................................................................................................................TAT---------------------------------------------------------------------------------------------------------------------------------------------------AGGATTC--------------------------------------------------------GCAGGAGATTCAATC..2521.5030000000030
............................................................................................................................................................................................................................................ACGTAT---------------------------------------------------------------------------------------------------------------------------------------------------AGGATTC--------------------------------------------------------GCAGGAGATA.......2321.5030000000300
...................................................................................................................................................................................................................TTACTAATCAAAAAGCTACCCACC..........................................................................................................................................................................................................................................2421.5030200001000
.......................................................................................................................................................................................................................................CACCAACGTAT---------------------------------------------------------------------------------------------------------------------------------------------------AGGATTC--------------------------------------------------------GCAGGAGA.........2621.5030100000200
....................................................................................TAAGAATAAGAATCTAGTTTATGTA........................................................................................................................................................................................................................................................................................................................................................................2511.0010000000100
.......................................................................................................................................................................................................................................CACCAACGTAT---------------------------------------------------------------------------------------------------------------------------------------------------AGGATTC--------------------------------------------------------GCAGG............2321.0020200000000
.........................................GAATCACTAACATTATTAAATCTA....................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
........................................................................................................................................................TAAATACAGAAAATGTACACTATTACACA................................................................................................................................................................................................................................................................................................2911.0010100000000
...............................................................................................................................................................................................................................................TAT---------------------------------------------------------------------------------------------------------------------------------------------------AGGATTC--------------------------------------------------------GCAGGAGA.........1820.5010000000010
...............................................................................................................................................................................................................................................TAT---------------------------------------------------------------------------------------------------------------------------------------------------AGGATTC--------------------------------------------------------GCAGGAGATTCAAT...2420.5010000000010
....................................................................................................................................................ACACTAAATACAGAAAATGTACACTA.......................................................................................................................................................................................................................................................................................................2620.5010100000000
............................................................................................................................................................................................................................................ACGTAT---------------------------------------------------------------------------------------------------------------------------------------------------AGGATTC--------------------------------------------------------GCAGGAG..........2020.5010000000010
.........................................................................................................................................................................................................................................CCAACGTAT---------------------------------------------------------------------------------------------------------------------------------------------------AGGATTC--------------------------------------------------------GCAGGAGA.........2420.5010000000010
.........................................................................................................................................................................................................................................CCAACGTAT---------------------------------------------------------------------------------------------------------------------------------------------------AGGATTC--------------------------------------------------------GCAGGAG..........2320.5010000000100
.............................................................................................................................................TATAAGTACACTAAATACAGAAAATGTC............................................................................................................................................................................................................................................................................................................2820.5010000000010
..............................................................................................................................................................................................................TTTCATTACTAATCAAAAAGCTACCCA............................................................................................................................................................................................................................................2720.5010000000010
.........................................................................................................................................................................................................................................CCAACGTAT---------------------------------------------------------------------------------------------------------------------------------------------------AGGATTC--------------------------------------------------------GCAGGAGATT.......2620.5010000000010
.........................................................................................................................................................................................................................................CCAACGTAT---------------------------------------------------------------------------------------------------------------------------------------------------AGGATTC--------------------------------------------------------GCAGGAGATTC......2720.5010000000010
...................................................................................................................................................................................................................TTACTAATCAAAAAGCTACCCAC...........................................................................................................................................................................................................................................2320.5010000000010
...............................................................................................................................................................................................................................................TAT---------------------------------------------------------------------------------------------------------------------------------------------------AGGATTC--------------------------------------------------------GCAGGAGATTC......2120.5010000100000
........................................................................................................................................................................................................................................ACCAACGTAT---------------------------------------------------------------------------------------------------------------------------------------------------AGGATTC--------------------------------------------------------GCAGGAGAT........2620.5010100000000
....................................................................................................................................................................................................................TACTAATCAAAAAGCTACCCACCAAC.......................................................................................................................................................................................................................................2620.5010010000000
droPer2
TGTAA---------------ACACTTAACAAATGGTGCATAGAATCACAAACATTATTAAATCTAAGAACTTTACACTCAATATTAAGAATAAGAATCTAGTTTATGTACAGTGAAGAAACCTAAACGATTATCAACTAATTATAAGTACACTAAACACAGAAAATGTACACTATTACACATACACACCCAAAGATCTCAAACCAATTTCATTATTAATCAAAAAGCTACCCACCAACGTAT---------------------------------------------------------------------------------------------------------------------------------------------------ACGATTC--------------------------------------------------------GCAGGAAATTCAATCGGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................................................................................................................................................................................................................CACCAACGTAT---------------------------------------------------------------------------------------------------------------------------------------------------ACGATTC--------------------------------------------------------GCAGGAA..........2521.002020000
.......................................................................................................................................................................................................................................CACCAACGTAT---------------------------------------------------------------------------------------------------------------------------------------------------ACGATTC--------------------------------------------------------GCAGG............2321.002020000
....................................................................................................................................................................ATGTACACTATTACACATA..............................................................................................................................................................................................................................................................................................1920.501010000
.......................................................................................................................................................................................................................................CACCAACGTAT---------------------------------------------------------------------------------------------------------------------------------------------------ACGATTC--------------------------------------------------------GCAGGAAAA........2720.501010000
.......................................................................................................................................................................................................................................CACCAACGTAT---------------------------------------------------------------------------------------------------------------------------------------------------ACGATTC--------------------------------------------------------GCAGGAAAT........2720.501010000
....................................................................................................................................................................................ATACACACCCAAAGATCTCAAACCA........................................................................................................................................................................................................................................................................2520.501010000
.......................................................................................................................................................................................................................................CACCAACGTAT---------------------------------------------------------------------------------------------------------------------------------------------------ACGATTC--------------------------------------------------------GCAGGAAA.........2620.501010000
.......................................................................................................................................................................................................................................CACCAACGTAT---------------------------------------------------------------------------------------------------------------------------------------------------ACGATTC--------------------------------------------------------GCAGGA...........2420.501010000
........................................................................................................................................................................................................................................ACCAACGTAT---------------------------------------------------------------------------------------------------------------------------------------------------ACGATTC--------------------------------------------------------GCAGGA...........2320.501010000
.......................................................................................................................................................................TACACTATTACACATACACACCCAAAGA..................................................................................................................................................................................................................................................................................2820.501010000
...........................................................................................AAGAATCTAGTTTATGTACAGTG...................................................................................................................................................................................................................................................................................................................................................................2380.383030000
...........................................................................................AAGAATCTAGTTTATGTACAGTGAA.................................................................................................................................................................................................................................................................................................................................................................2580.383030000
.......................................TAGAATCACAAACATTATTAAATC......................................................................................................................................................................................................................................................................................................................................................................................................................2480.383030000
...............................................................TAAGAACTTTACACTCAATATTAAGAAT..........................................................................................................................................................................................................................................................................................................................................................................................2880.252020000
...........................................................................................AAGAATCTAGTTTATGTACAGTGA..................................................................................................................................................................................................................................................................................................................................................................2480.252020000
..TAA---------------ACACTTAACAAATGGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................1970.141010000
..............................................................................................................................................................................................AAAGATCTCAAACCAATTTCATTAT..............................................................................................................................................................................................................................................................2570.141010000
..............................................................................................................................................................................................AAAGATCTCAAACCAATTTCATT................................................................................................................................................................................................................................................................2370.141010000
..............................................................................................................................................................................................AAAGATCTCAAACCAATTTCATTA...............................................................................................................................................................................................................................................................2470.141010000
........................................................................................................ATGTACAGTGAAGAAACCTAA........................................................................................................................................................................................................................................................................................................................................................2180.131010000
......................................................................................................................AACCTAAACGATTATCAACTAATTA......................................................................................................................................................................................................................................................................................................................................2580.131100000
.......................................................................................................................ACCTAAACGATTATCAACTAATTA......................................................................................................................................................................................................................................................................................................................................2480.131010000
.........................................................TAAATCTAAGAACTTTACAC........................................................................................................................................................................................................................................................................................................................................................................................................2080.131010000
....................................................................ACTTTACACTCAATATTAAGAA...........................................................................................................................................................................................................................................................................................................................................................................................2280.131010000
..........................................AATCACAAACATTATTAAATCTAAGA.................................................................................................................................................................................................................................................................................................................................................................................................................2680.131010000
.......................................TAGAATCACAAACATTATTAAATCTA....................................................................................................................................................................................................................................................................................................................................................................................................................2680.131010000
...........................................................................................AAGAATCTAGTTTATGTACAGTGAAGA...............................................................................................................................................................................................................................................................................................................................................................2780.131010000
...........................................................AATCTAAGAACTTTACACTC......................................................................................................................................................................................................................................................................................................................................................................................................2080.131100000
...........................................................................................AAGAATCTAGTTTATGTACAGT....................................................................................................................................................................................................................................................................................................................................................................2280.131010000
.....................................................TTATTAAATCTAAGAACTTTA...........................................................................................................................................................................................................................................................................................................................................................................................................2180.131010000
................................................................................................TCTAGTTTATGTACAGTGAAGAAAC............................................................................................................................................................................................................................................................................................................................................................2580.131010000
.............................................................................................................................ACGATTATCAACTAATTATAAGTACAC.............................................................................................................................................................................................................................................................................................................................2780.131010000
droAna3
CCAAA---------------ATCCTAAAGTATTAAATAATATAATGTATACTAATTTCAATCGTAAGAATTATAGGTTAAACTTAATTAATAAGAACATAACCCATATCCAAACTTTTGAACTAAGCGAATTTGAAAAAACAAAAGAAATTTTACTGGAGAAAAAAGTCCTTTTCTTCTCTTATACACCTAAACAGTACAAACCCCATAATATTATAATAAAAAAAATACCCCCCTCAATTT---------------------------------------------------------------------------------------------------------------------------------------------------ACAACGA--------------------------------------------------------AAGTGAGATAACATTAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................TAATGTATACTAATTTCAATCGTAAG..................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.........................................................................................................................................................................................................................................CCTCAATTT---------------------------------------------------------------------------------------------------------------------------------------------------ACAACGA--------------------------------------------------------AAGTG............2120.501100000
droBip1
CATTGTCCTATATAATGCGGACATAAAACAACTGAGAGAAACCATCT---------------GTGGTAAGTATAGCCTTAACTTAATAAATAAAAATTTTACACATTTAAAACTTTTCACCCTTGAAAACCTGGATAAAGTACAAAGTACTCTTACACAAAACAAAATTATGTACTTCACGTA----CCCAAGCAATTCAAACCCCACTCAATAATCATAAAAAAACTACGCGTAAACATAT---------------------------------------------------------------------------------------------------------------------------------------------------TTACGCT--------------------------------------------------------CAATGAAATCCAACTAGSizeHit CountTotal NormTotal
No Reads
droKik1
CTTAG---------------ATGCTAAGAAAATTAAAAACCTCATAC---------------CATTTAAGCACACCCTAAATATAATAAATAAAAATATTATCCATATTAAAACATATAAGCTAGAAAATCTAAATGCAGCAAAAAATATATTAACAAGCAACAAAGCACTGTACTTCACATACACGCCAAAACAACTAAAACCACACAACATTATAATTAAGAAAATACCCCCAGAAATAT---------------------------------------------------------------------------------------------------------------------------------------------------TTGACAA--------------------------------------------------------AAATGAGATTAAACAAGSizeHit CountTotal NormTotal
No Reads
droFic1
TATAA---------------ACCCTAAACAACTAAAAACCTTATTTA---------------ATTTTAAGTACACGCTTAACATAATCAACAAAAATATAATCCACCTCAAAGTGTTCACAATAGAAACATTAGAAATAGCCAAAAATATCATTGCTGAAAATCACCTTCACTTTTTTACATACACCCCTAAACAATTAAAACCTCATAATATTATCATTAAAAAAATACCTGGCCTAGTAT---------------------------------------------------------------------------------------------------------------------------------------------------TCAACAA--------------------------------------------------------AGACGAAGTACTTACCGSizeHit CountTotal NormTotal
No Reads
droEle1
TCAAA---------------ACCCAAAACTATTACAAATCGCCTTAAAAATTGTTATTAAACCAACAGAATTTATATTAAACATTATAAATAAGAATAGAATTAATGTAA-GTTATTCTCTCTAGACCATTTTGAAAATGTAAAAAAACTCATGACTGAACGCAAAATGAGTTATTTCTCTTATACACCCAAACAACTCAAACCTCACACTATCATCTTAAAAAAACTTCCCCCAAGCGTTT---------------------------------------------------------------------------------------------------------------------------------------------------ACGAAGG--------------------------------------------------------AGCAGAAATAAAGAAAGSizeHit CountTotal NormTotal
No Reads
droRho1
CGAAA---------------ATCCTTCAAAACTAAAAGGTATATTTA---------------ACTATAAGTTTAATTTAAACATATTAAATAAAAATTATACCCATATTACAAATTTCTCCCTCAAAACTCTCGAAAAAACCAAAACAATACTGTCAAAAAATAAAATGAACTTCTTTACATACACACCCAAACAAATAAAGCCACACAACATAATAATAAAAAAAATTCCTCCTTTATTAT---------------------------------------------------------------------------------------------------------------------------------------------------TTAATAA--------------------------------------------------------AGAGGAAGTAGAAAACGSizeHit CountTotal NormTotal
No Reads
droBia1
TACAA---------------ATGTTGAGAAAATAGAAAATAAAAGCATAGGATCTGAA--------------------------------------------------------------------AAATCGCAAAAAATTGTTATAGATATTAATGATAGTGAGGCAGAATTTCGAAACGTAAG-----------------------TCAAGCACC-----------------------------------------------------------------------------------------------------------------------------------------TAAAATA----------AGTTATACATCTC-------AATGA--------------------------------------------------------TAGTGATAC----CGAASizeHit CountTotal NormTotal
No Reads
droTak1
TGCAG---------------AACCAAAAACATTAACAGGTATGTTGCAAAATTTTATTAAGGACAACAAGTTTATCCTAAATATAATAAACAAAAACATAATCCATGTCAAGGTATTCTGCCTAGAACACTACCAACAAACAAAAGAATTACTGTCAAAAAATAAAGCTAAATTCTTTTCATATACCCCCAAAGAACGAAAACCGCACTCAATAGTCCTTAAAAGACTCCCTCTTGATGTCT---------------------------------------------------------------------------------------------------------------------------------------------------TCCAAGT--------------------------------------------------------AGATGACATA---CTAASizeHit CountTotal NormTotal
No Reads
droEug1
CGAAA---------------ATGCTAAGAAAGTAAGATCCATAATGA---------------CCAGCAAATTTAACCTAAATATCATAAACAAAAACGTCATACATATAAAAGTTTTTACTATGGATAATCTCATCCATACCAAAAATACACTAACAAAAAATAATATGTTATTCTTTACGTACACTCCTAAGCACCTTAAACCCCATAATATAATTATAAAAAAAATACCTCCCTCATCAT---------------------------------------------------------------------------------------------------------------------------------------------------TTGATTG--------------------------------------------------------TAACGATATAAAAAACGSizeHit CountTotal NormTotal
No Reads
dm3
AAATG---------------CATATAAGTATA-----------------AAAAAAATCAAAACTAATT-TATAGAACTTAAT---------------------------------------------------------------------------------------------------------------------------------TTTGTAGTTAACAACTTATATTAGATAATAT---------------------------------------------------------------------------------------------------------------------------------------------------TAAA--A--------------------------------------------------------ACTTGTAAACAAACTCTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................AAAACTAATT-TATAGAACTTAAT---------------------------------------------------------------------------------------------------------------------------------..................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TCAGA---------------CACAGATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACACTGCAGTGCTGCAACCACAGAGCGCAAAAAAGAAGTAATTTAAAGTTATATATACCTGCATATATATAAATATAAATCAAATAAAGTACATATTACATATTTGTGTATTTC-------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droSec2
TCAGA---------------CACAGATA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACACTGCAGTGCTGCAACCACAGAGCGCAAAAAAGAAGTAATTTAAAGTTATATATACCTGCATATATATAAATATAAATCAAATAAAGTACATATTACATATTTGTGTATTTCCACAT------------------------GCAAGAA--------------------------------AAACAGAGACAACTGCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
No Reads
droYak3
CACAG---------------ACACACACACACATACA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACACTGCAATGCTGCAACCACAGAGCGCAAAAAAGAAGTAATTTAAAGTTATATATACCTGCATATATATAAATATAAATCAAATAAAGTACATATTACATATTTGTGTATTTCCACAT------------------------GCAAGAAAAACCGAGAGAACTGCAAGAGCAACAAACAATAAACCAAACACACATATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
CAAAA---------------CACACACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATACTGCAGTGCTGCAACCACAGAGCGCAAAAAAGAAGTAATTTAAAGTTATATATACCTGCATATATATAAATATAAATCAAATAAAGTACATATTACATATTTGTGTATTTCCACAT------------------------GCAAGAAAAACCGAGAGAACTGCAAGAGCAACAAACAATAAACCAAACACACATATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................................................................................................................................................................................................................................................................................TGCAGTGCTGCAACCACAGAGCGCA..........................................................................................................................................................................2511.0011000000
CAAAA---------------CACACACA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATACTGCAGTGC...........................................................................................................................................................................................2611.0011000000

Generated: 05/18/2015 at 01:24 AM