ID:

dmo_1798

 Coordinate:

scaffold_6540:3685843-3685993 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-42.4 -42.3 -41.9

Flybase annnotation

CDS [Dmoj\GI23662-cds]; exon [dmoj_GLEANR_8786:4]; intron [Dmoj\GI23662-in]

Repeatable elements

NameClassFamilyStrand
Homo6DNAhAT-Pegasus-
AT_richLow_complexityLow_complexity+
AT_richLow_complexityLow_complexity+
mature
  1. scaffold_177:253-271 -
  2. scaffold_3025:3656-3674 -
  3. scaffold_4368:4246-4264 -
  4. scaffold_6271:42217-42235 -
  5. scaffold_6318:117879-117897 -
  6. scaffold_6328:2524792-2524810 -
  7. scaffold_6328:3759715-3759733 -
  8. scaffold_6338:36690-36708 -
  9. scaffold_6359:1518656-1518674 -
  10. scaffold_6473:2711195-2711213 -
  11. scaffold_6496:25746206-25746224 -
  12. scaffold_6498:2847777-2847795 -
  13. scaffold_6498:3133054-3133072 -
  14. scaffold_6500:28706652-28706670 -
  15. scaffold_6500:30877539-30877557 -
  16. scaffold_6500:31125062-31125080 -
  17. scaffold_6500:31986534-31986552 -
  18. scaffold_6540:2408833-2408851 -
  19. dmo_1798  scaffold_6540:3685875-3685893 -
  20. scaffold_6541:1047640-1047658 -
star

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GAGCAATCCCGTAAATACCTGCTCGAGAGCAAACTGTTCAAGAAACACTGGTAAGTGTTATAAATCGGATAATTCATTTTGATTTAAATGTTTATATATAAATTTATATATTTTCTAAATATTTTGTAAGTTTATTTATGATTGCTGTTATCATTATACCCTGAACCCATTTTCAATGGGAAATCAGGGTATAATGGTTTTGTTGAAATGTATGTAACAGGCAGAAGGAGGCGTGGCAGACCCCACAAAGT
**************************************************..........(((((((((........))))))))).....(((((.(((((((((((................))))))))))).)))))........(((((((((((((((.((((((...))))))...)))))))))))))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total M060
embryo
 M046
female body
 V056
head
..........GGAAATACCTGCTCGAGAGCAAACT........................................................................................................................................................................................................................ 25 1 1 1.00 1 1 0 0
....................................................................................................................................................................................................................TGTAACAGGCAGAAGGAGGCGTGG............... 24 0 20 0.15 3 3 0 0
.................................................................................................................................................................................................................................AGGAGGCGTGGCAGACCCCACA.... 22 0 20 0.15 3 3 0 0
......................................................................................................................................................TCATTATACCCTGAACCCA.................................................................................. 19 0 20 0.05 1 0 1 0
......................................................................................................................................................................................................................TAACAGGCAGAAGGAGGCGTG................ 21 0 20 0.05 1 0 0 1

Anti-sense strand reads

CTCGTTAGGGCATTTATGGACGAGCTCTCGTTTGACAAGTTCTTTGTGACCATTCACAATATTTAGCCTATTAAGTAAAACTAAATTTACAAATATATATTTAAATATATAAAAGATTTATAAAACATTCAAATAAATACTAACGACAATAGTAATATGGGACTTGGGTAAAAGTTACCCTTTAGTCCCATATTACCAAAACAACTTTACATACATTGTCCGTCTTCCTCCGCACCGTCTGGGGTGTTTCA
**************************************************..........(((((((((........))))))))).....(((((.(((((((((((................))))))))))).)))))........(((((((((((((((.((((((...))))))...)))))))))))))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total M060
embryo
 M046
female body
 V041
embryo
........................................................................................................................................................TAATATGGGACTTGGGTAAAA.............................................................................. 21 0 20 0.05 1 0 0 1
.................................................................................................................................................................................CCCTTTAGTCCCATATTACCAA.................................................... 22 0 20 0.05 1 1 0 0
.............................................................................................................................................................................................................................GTCTTCCTCCGCACCGTCTGGGGTG..... 25 0 20 0.05 1 1 0 0
..........................................................................................................................................................................................................AACTTTACATACATTGTCCG............................. 20 0 20 0.05 1 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6540:3685793-3686043 - dmo_1798 GAGCAAT------CCCGTAAA--TACCT---GCTCGAGAGCAAA----------------------------------CTG-TTCA-----------AGAAACA---------------C---------------------------------------------------------------------------------------TGGT-------------AA-----------------------------------GTGTTATAAATCGGATAATTCATTTTGATTTAAAT-GTTTA--------------------------------------------------------------------------------------------------------------------------------------TA-----------TATAAAT--------------------------------------------------------------------------------------------------------TTATATATTTTCT-----AAATATTTTGT--A------------------------------AG-------T-T-T-A-----TTTATGA------------------------------------------------------------------TTGCT--------GT--TATCATTATACCCTGAACCCATTTTCAATGGGAAATCAGGGTATAATGGTTTTGTTG-------AAATGTATGTAACAGGCAGAAGGAGGCGTGGCAGACCCCACAAAGT----
droVir3 scaffold_12736:42-273 + CATATT----------GCAAA--GAAA--------------------------------------------------------------------------AAA---------------TTAGAA-AGGTTTTTTAATAGT-----------------------------------------------------C---------------------------------------------------------------------------------------------------TT-A--------------------------------------------AAATTGACTTTAATTTAATTATGTTATTGA---T------------------------------------------------------------GTTAATTTTTAAATTGAAT-------------------------------T-------------------------------------------------------------------------T-----------------AATTATTTTGT--AAATTTATT-------------------------------------------------------------------------------------------------------------------ATTAAT--------GT--TACTTTTATACCCTGAACCCATTAAAAA-TGGGTATAAGGGTATATTGTATTTGTGCGAAATGCAAATGTATGTAACAGGCAGAAGGAAGCATCTCCGACCCCAGAAAGT----
droGri2 scaffold_15110:1149222-1149458 - CTGCTCA----AATGGAAA-A--C-------------------------------------AGAC------------------------------------TTA---------------TTTCAATCG-----------------------------------------------------------------------------------------------------AAACCT-----TTACT----GTTAAGTGAA--TATATTTGGAGTTGA----------------------TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGATTAGAGAATTATTA--------------GCATTGATTTGAA--------------------------------------------------------------------------------------------------------------TTTTTATTTCT-CTACAAAGT-----GCATAAG-CAATTAAT---------G--ACTCTATATACCCTGGATGAAA-----ATGGATAAAAATTGTATAATGAAGTTGTGT-------ACAAGTATGTAATAGGTAGAAGGAAGAATCTCCGACCCCATAAAGT----
droWil2 scf2_1100000004382:1171858-1172091 - AGAAAT-------TCTGTAAA--CACT-----------------TCACAATTAAATA---------------------CTGATTCAAAAA-----------ATG---------------T-----------------------------------------------------------------------------------------------------------------TG-----CTATG----TTA--------------------------------------------------AATTTAGTGTAAAATATTACGAAT---TCAAAGTATTTTG------------------------------------------------------------------TTTAGC------------------AATTTTC-----------AATGA--------------------------------------------------------------------------------------------------------------------------------TTTGCT--A------------------------------AGTTTTG----T-T------------AA----------TTA------------------------------------------------C-TGA--------------C--AATTATTATACCATACACCCAT-------AGGGTGAAATGGTATATTAAAGTCGCCA-------AAATGTATGTAACAGGCAGAAGGAAGCATCTCCGACCCCACAAAGT----
dp5 Unknown_singleton_2746:656-923 - CAGCAAGAGAAC-TCCCCG----------------------------TAAATGAGTACGATGTACTCATGTAAA-TTAA-G-TTTA-----------AAGAACA---------------T----------TCTT------------------------------------------------------------------------------------------CG-----------------------------------G---------------------------TGACATT-ATTTT-----------------------T---ATAAATTATACTA------------------------------------------------------------------GGCAAC------------------AAAATTT-----------AACAT--------------------------TTTACTTACTTTTCTAA-GCA---------------------AACCAACGTTTTCTGAT---------------------------------------------------AGATTTGGC----------------------------------------------------------------------------------------------------------------------GCT---------A--ACATTTTATACCCGATACACAA----AA-TGAGTATTGGGGTATATTAGATTTGTGGTAAAAGTGGATGTGTGTAACGTCCAGAAGGAAACGTTTCCGACCCCATAAAGT----
droPer2 scaffold_10:1893411-1893657 - GCAGTC--------CCTTATA--TACTC---GCACCAG------------------------------------CCAGCGTGTGCGAAAG-----------GCT---------------G--------------------------------------------------------------GGCTATACTAGT----------------------------TTTC-----------------------------------TAG-----------------------------------------------------------------------------------------------------------------------------ATATGTTGATTATATTTGTTTATTTAAAACTAATCAGT--------------------------------------------------------------------------------------------------------------------------------------------TCCA------G---------------GG---CTATAA-TCT--ATGTGTGAGT---------------GGTT------------------------------------------------------------------------C-CGTTTAGC---------A--CATTTTTATACCCGATACTCAA----AA-TGAGTATTGGGGTATATTAGATTTGTGGTAAAAGTGGATGTGTGTAACGTCCAGAAGGAATCGTTTCCGACCCTATAAAGT----
droAna3 scaffold_13228:850077-850274 - AGTGCC----------ATAGG--AAAAT---GCT----------TGGGGAAA-------------------------------------A----------ATCA------------------------------------------------------------------T--------------------------AGAAGACCACAAAT-------------TA-----------------------------------ATGTAGGAAATCGGAGA-------------------------------------------------------------------------------------------------T------------------------------------------------------------TTC-----------AAC----------------------------------------------TTTGGA-------------------------------------------------------------------------------------------------------------------------------TGAGAATTT-------CA-AAGATATGGTAA------------------------------------------------C-TGTTAGAT--------GT--CATTTTTATACCCTTG------------------AAGAAGGTATTATAATTTTGGTC-------AAAAGTGTGCAACGCAGTGAAGAAGACATCTCCGACCCTATAAAGT----
droBip1 scf7180000396574:53298-53561 + GAGCCAT------GCCAAATA--T--AT---GCT----------TGCA------------------------AGCTTAATT--TTT-----------TGGAACA---------------T------------------------------------------------------------G--------------------------GAACAACAACTCAGTTTTG-----------------------------------T----------------------------TTAAATGTT--A--------------------------------------------------------------------------------------------------------------------------------------TT-----------TATAAACTTACCATAGTCCACAAATATGTGGATTCAATTGGTTTTCCTATTTTGAG-------------------------------------------------------------------------------------------------------------------------------GGTTATTTT-------TA-AAGG--TGGTACTTAGGCCCCTCTTTAAT----------G------------------A-A------TCT---------G--AATTTTTATACCCTTG------------------CAGAGGGTATTATAATTTTGTCC-------AAAAGTGTGCAACGCAGTGAAGGAGACATCTCCGACCCTATAAAGT----
droKik1 scf7180000302472:708857-709070 - GAATAAT------GCAATAAA--C--TA---A-T----------TAGA-------------------------------------------------------------------------------------------------------------GGTAAATT---TAT--------------------------TCAAGTACAAAAATGCTAT--------TAATGAAGCTTTAATTTTACT----TTCAAC-TTA--TAT-----------------------------------------------------------------------------------------------------------------------------AAATTCTG----------------A------------------GA-TTTT-----------AACAA------------------------------------------------------------------------------------------------------------------------------------------------TTAAAAA---------------------------TTGAATCT-------AA------------------------------------------------------------------ACGAT--------AT--GGTTTTTATACCCTTG--------------------CAGGGTATTATAATTTCAGTC-------AGAAGTTTGCAACGCAGTGAAGGAGACGTTTCCGACCCCATAAACC----
droFic1 scf7180000449937:270-533 + CAACTT---------CTTAAA--AATT-----TT---------------------------------------------------------------------------------------AGAA-AGC-AACTCCATTGTTTCTAAAACATTTAAATGTTAATTTACAATTAGAAAAATTGTTCTTTAATAGTCATATATTCC------------------------------------------------------------------------------------------------------------------------------------------AAAA-------------------------------------------------------AATTTTTTTATTGATAAATAATAAAA--------------------------------------------------------------------------------------------------------------------------------------------TCTTT-----G---------------AG---ATTTAACTTA--ATGTTTGATTTTAT--------TATTTA-CC-------AAAT--------------------------------------G-------------------------AAATTAATTTTGTGTTATATTTGTATACCCTTG------------------C------------AATTTCAGTC-------AGAAGTTTGCAACGCAGAGAAGGAGTCACCTCAGACCCCATAAAGT----
droEle1 scf7180000488370:39341-39581 - GGGAAAC------TCAGCGAC--TACCT---------------------------------------------------------------------------T---------------TTCCAAACG-----------------------------------------------------------------------------------------------------AGCCTT-----CTGCT----CCGCAGATAA--CTCATGTGAATCGGACG---------------------------------------------------------------------------------------------------------------------AAA-----------------------------------------------------------------------------------TTTCATTTATTTGCATATCCGGAGGAAGGAGATTAAAATTTTCCT--------------AAAAATCGATTTCTAAA------------------------------------------TATAAATCT----------------------------------------------------TGG------------------------------------------------C-TTAAAGGT--------GT--TATTTTTATACCCTTG------------------CAGAGGGTATTATAATTTCAGTC-------AGAAGTTTGCAGCGCAGTGAAGGAGACATCTCAGACCCTATAAAGT----
droRho1 scf7180000780086:139724-139953 + AACTGAT------TCTATAAA--AA--T---ACT----------TAAA-------------------------------------------------------------------------------------------------------------GGCAAAAC---AATCAAAAAAAAT--------------------------ATATAATAA------------------------------------------------------------------------------------------------------------------------------------------------CCATGTTATTTAGAATTTCCAATTTAATTAAACGCAG----------------A------------------AATGTTC-----------AATAC--------------------------------------------------------------------------------------------------------------------------------TTTGTT---------------------------G-----AGGTTTAAAA-T-T-A-----TTTATT---------------------------------------------------------------------AT----------T--ACTATTTATACCCGTTACTCGT-------AGAGTAAAAGGGTATATTGTATTCGTGC-------AAAAGTATGTAACAGCTAGAAGGAAGCGTTTCCGACCCTATAAAGT----
droBia1 scf7180000302189:37007-37222 - GGGTCAT------GTAACAAA--AACCT---GTTTTTGAGCGAA-----------------GTGG----------------------------------------------------------AG-AAGACATTGTACGAT-----------------------------------------------------T-----------------------------------------------------------------------------------------------GAAATT-ATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCCATCAGCTTCTTATTA--------------ATATGGCTATATA-------------TGTAA--GCCTACTCAATGTATATTC-------------------------------------------------------------------------------------------------------G-TGTCTAAT--------AT--AATTTGTATACCCTTG------------------CAGAGGGTATAATGATTTCAGTG-------AGAAGCTTGCCACGCAGTGAAGGAGACGTTTTCGACCCCATAAAGT----
droTak1 scf7180000414399:18201-18437 - TCCCGA------------AGA--CACCG---GTTCTACAA----------------------------------------------------------------------------------GAA-ATG---------------------------------------------------------------------------------------------------------T-----CTCCTGTTCATCGGT----ATACTTTTTACCGCGAAAGTTTCTTTCTGCCGACATT-GTTTT--------------------------------------------------------------------------------------------------------------------------------------TTT-----------ATCAG------------------------------------------------------------------------------------------------------------------------------------------------TTTGAA--------------------------------------------------------------------------ATTTTTTTTAT-ATCATCAGCTGTAAGTATGAC-TGTTTAAT------------GGTATTTATACCCGTTACTCGT-------AGAGTAAAAGGGTATACTAGATTCGTGC-------AAAAGTATGTAACAGCTAGAAGGAAGCGTTTCCGACCCCATAAAGT----
droEug1 scf7180000409239:16653-16885 + GCGCAAG------CCCCTC-TGCCGGGAGTTACT----------TGGCTC-----------------------------------------------AGACCCA------------------------------------------------------------------C------------------------------------C--------------------------------------------------------------------------------------------------------------------------------------GAGGGGTG---AATTAA-ACTTTTTATTTAT--TTTTTAATTT------------------------------------------------------------TATATAGAGCG--------------------------------------------------------------------------------------------------------TGATTTCGTTTTC--------------------------G--------ACTTCTTTG-----AG--------GGTTGT-CC-------GAGG--------------------------------------GGGCGT-----------CGT-T------TTT---------A--CGTTTTTATACCCGTTACTCGT-------AGAATAAAAGGGTATATTAGATTCGTTG-------AAAAGTATGTAACAGGTAGA----AGTGTTTCAGACCCTATAAAGT----
dm3 chr3LHet:2004367-2004594 - CAAACT---------GTTA-AATAAAAAGTTAAT-------------TA------------------------------------TATAA-----------TTA---------------T-----------------------------------------------------------------------------------------------------------------TA-----TTAAT----TAA--------------------------------------------------AATTAATTATAAAATAAAACACACATATC-----------AAAACATT---AACTAA-AAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATACAA--TAGTTAGAGT-------------TTAAT-TT-------AA-----------------------------C---------TGCTACT-----------CCC-A------TAT---------A--TCTTTTTATACCCGTTACTCGT-------AGAATAAGGGGGTATTCTAGATTCGTTG---------AAGTGTGTAACAGGCTGAAGGAAGCGATTCTGACTGTATAAAGT----
droSim2 3l:22437066-22437352 - GCCCACT------CC------------------T----------ACGCGAAA-------------------------------------AACCGCCCAAAACTGCCACTTTTGAAAAAATTGTGA-ATGTTTTTTCATGAT-----------------------------------------------------T---------------------------------------------------------------------------------------------------TT-ATTAC-------------------------------------------TTTACTTTGGAATATTTAGGTATTTAA---T-----------------------------------------------AATATTAAAAAAATTT-----------ATAAT--------------------------TTTATT-------------------------------------------------------------------------T-----------------ATTAATTAG--GTTTATTTGATGTTCATTT--------T-----AG--------AGTTAT-TC-------AAGA------------------------------------------------------------------ACTGATTA--TAC--AATTTTTATACCCATTACTCGT-------AGAGTAAAAGGGTATACTAGTTTCGTTG-------AAAAGTATGTAACAGGTAGAAGAAAGCGTTTCCGATTATATAAAATATAT
droSec2 scaffold_76:139568-139830 + AATTCC----------GAAAA--AAGTT---GTATCAGAATAGA-----------------ATAG-----------------------------------AATA---------------CCAGTA-AGG-T----------------------------------------------------------------------------------------------------ACTC-----CTTTC----TTTAAA----TTAGTTATTGTATTATA-----------------------------------------------------------------------------------------------------------------------------AATTTGTTTATGTATAAATAATAATA--------------------------------------------------------------------------------------------------------------------------------------------TTTATTAATAATGATATTTAAT--A------------------------------AG-------T---TATTATTATAAATAA----------TT-------------------------------------A-----TTATAAA-TAATAACTTATT--------CCATGTTATACCCGTTATTCGT-------AGAGTAAAAGGTTACACTAGATTCGTTG-------AAAAGTTTGTAACAAGCAGAAGAAAGCGTTTCCGAT-ATGTAAGGT----
droYak3 3L:17558747-17558959 - TAAATAA----C-TGTGCGAA----------------------------------------GTAA------------------------------------ATA---------------CTACTATAG-----------------------------------------------------------------------------------------------------ATACTC-----CTACT----TTCAGA-TTA--TTC-----------------------------------------------------------------------------------------------------------------------------ATATCCAGATTATATTTATTTCAAT------------------AAACTTT-----------AACAA------------------------------------------------------------------------------------------------------------------------------------------------TTTAAATTA--ATGCCTGAAT-------------T------------------------------------------------------------------------------------TAT--------TT--TATATTTATACCCGTTACTCGT-------AGAGTAAAAGGGTATACTAGATTCGTTG-------AAAAGTATGTAACAGGCAGAAGGAAGCGTTTCCGACCATATAAAGT----
droEre2 scaffold_4845:2720473-2720710 + AGACCAA----T-TTGTTA-AAAGAAAT---GCT----------AATCAACA-------------------------------------A----------ATCA------------------------------------------------------------------T----------------------------------------------------------------T----------------------------------------------------------------------------------------------------------AAATTAAC---AA------------------------------------------------------------------------------------------------------------------------------TTAAATTATTTTACATATTTTGTA------------TGTTTTCAA--------------AAAAGTGGATTTTTATGTAATTATTTTGTTTCC--------------------------T--------ATTT-------------------------------------------------------------------C---------TGCTACT-----------AAA-ACATATAAT----------C--ACTAATTATACCCGTTACTCGT-------AGAGTAAAGGGGTATACTAGATTCGTTG-------AAAATTATGCAACAGGCAGAAGGAAGCGTTTCCAATCATATAAAGT----

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
GAGCAAT------CCCGTAAA--TACCT---GCTCGAGAGCAAA----------------------------------CTG-TTCA-----------AGAAACA---------------C---------------------------------------------------------------------------------------TGGT-------------AA-----------------------------------GTGTTATAAATCGGATAATTCATTTTGATTTAAAT-GTTTA--------------------------------------------------------------------------------------------------------------------------------------TA-----------TATAAAT--------------------------------------------------------------------------------------------------------TTATATATTTTCT-----AAATATTTTGT--A------------------------------AG-------T-T-T-A-----TTTATGA------------------------------------------------------------------TTGCT--------GT--TATCATTATACCCTGAACCCATTTTCAATGGGAAATCAGGGTATAATGGTTTTGTTG-------AAATGTATGTAACAGGCAGAAGGAGGCGTGGCAGACCCCACAAAGT----SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAACAGGCAGAAGGAGGCGTGG...................24200.153000030
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGGCGTGGCAGACCCCACA........22200.153000030
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATTATACCCTGAACCCA.............................................................................................19200.051100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACAGGCAGAAGGAGGCGTG....................21200.051000100
droVir3
CATATT----------GCAAA--GAAA--------------------------------------------------------------------------AAA---------------TTAGAA-AGGTTTTTTAATAGT-----------------------------------------------------C---------------------------------------------------------------------------------------------------TT-A--------------------------------------------AAATTGACTTTAATTTAATTATGTTATTGA---T------------------------------------------------------------GTTAATTTTTAAATTGAAT-------------------------------T-------------------------------------------------------------------------T-----------------AATTATTTTGT--AAATTTATT-------------------------------------------------------------------------------------------------------------------ATTAAT--------GT--TACTTTTATACCCTGAACCCATTAAAAA-TGGGTATAAGGGTATATTGTATTTGTGCGAAATGCAAATGTATGTAACAGGCAGAAGGAAGCATCTCCGACCCCAGAAAGT----SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAGGAAGCATC....................25200.80160000000000000000000000000000000160000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAAAA-TGGGTATAAGGGTATATTG..................................................................26200.80160000000100000000000000000000015000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAATGTATGTAACAGGCAGAAGGA..........................27200.70140000000000000000000000002000000010110000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAATGTATGTAACAGGCAGA..............................23200.6012000000001000000000000000033000000003020000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAAAA-TGGGTATAAGGGTAT......................................................................22200.306000000003000000000000000000300000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAATGTATGTAACAGGCAGAAGG...........................24200.255000000000000000000001000000000000000400000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAATGTATGTAACAGGCAGAAGG...........................26200.204000201001000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAATGTATGTAACAGGCAGAAG............................25200.204000000000000000000000000003000000001000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAACAGGCAGAAGGAAGCAT.....................22200.153000000000000000000000000000000030000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGGCAGAAGGAAGCATCTCCGACC.............26200.102000000000000000000000000000020000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTGTATTTGTGCGAAATGCAAATGT............................................28100.101000000000000000100000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAGAAGGAAGCATCTCC.................19200.102000000000200000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGTATAAGGGTATATTGTATTTGTG..........................................................27200.102000000000000000000000000200000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACAGGCAGAAGGAAGCATC....................21200.102000000000000000000000000000000200000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAATGTATGTAACAGGC.................................20200.102000010000000000000000000100000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAACAGGCAGAAGGAAGCATC....................22200.102000000000000000000000000010000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGGGTATATTGTATTTGTGCGAAA.....................................................26200.102000000000000000000000000000200000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTATGTAACAGGCAGAAGGAAGCATC....................27200.102000000000000000000000000000000001000100000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAACAGGCAGAAGGAAGCATCTCCGA...............28200.102000000000000000000000000000000000020000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTATGTAACAGGCAGAAG............................20200.051000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGGCAGAAGGAAGCATC....................19200.051000000000000000000001000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTATATTGTATTTGTGCGAAA.....................................................22200.051000000000000000100000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAAAA-TGGGTATAAGGGTA.......................................................................21200.051000000100000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAATGTATGTAACAGGCAG...............................22200.051000000000000000000000000000000000000100000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGGCAGAAGGAAGCATCTC..................21200.051000000000000000000000000000000000100000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAACAGGCAGAAGGAAGCATCTCC.................26200.051000001000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGGTATATTGTATTTGTGC.........................................................21200.051000000000001000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTATGTAACAGGCAGAAGGA..........................23200.051000001000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCATTAAAAA-TGGGTATAAGGGT........................................................................24200.051000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-TGGGTATAAGGGTATATTGTATT..............................................................24200.051000000000000000000000000000100000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGAAGGAAGCATCTCC.................18200.051000000000000010000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAAAA-TGGGTATAAGGGTATAT....................................................................24200.051000000000100000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAATGTATGTAACAGGCAGA..............................21200.051001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGAAGGAAGCATCTCCGACC.............22200.051000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAGGAAGC.......................22200.051000000000000000000000000010000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCAGAAGGAAGCATCTCC.................20200.051000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAACAGGCAGAAGGAAGCAT.....................21200.051000000000000000000100000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAATGTATGTAACAGGCAGAAG............................23200.051000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTATGTAACAGGCAGAAGGAAG........................25200.051000000000000000000000000001000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAAAA-TGGGTATAAGGGT........................................................................20200.051000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGGCAGAAGGAAGCATCTCC.................22200.051001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGAAGGAAGCATCTCCGA...............20200.051000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTAACAGGCAGAAGGAAGCATC....................24200.051000000010000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAAGGGTATATTGTAT...............................................................18200.051000000000000000000000000000000000000001000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAATGTATGTAACAGGCAGAA.............................24200.051000000000000000000000000001000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAGAAGGAAGCATCTCCG................20200.051000000001000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCAAATGTATGTAACAGGCAGAAG............................26200.051000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAAATGTATGTAACAGG..................................19200.051000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAGGGTATATTGTATTTGTGCGA.......................................................25200.051000000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGGCAGAAGGAAGCATCTCCGAC..............26200.051001000000000000000000000000000000000000000000000000000000000000
droGri2
CTGCTCA----AATGGAAA-A--C-------------------------------------AGAC------------------------------------TTA---------------TTTCAATCG-----------------------------------------------------------------------------------------------------AAACCT-----TTACT----GTTAAGTGAA--TATATTTGGAGTTGA----------------------TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTAGATTAGAGAATTATTA--------------GCATTGATTTGAA--------------------------------------------------------------------------------------------------------------TTTTTATTTCT-CTACAAAGT-----GCATAAG-CAATTAAT---------G--ACTCTATATACCCTGGATGAAA-----ATGGATAAAAATTGTATAATGAAGTTGTGT-------ACAAGTATGTAATAGGTAGAAGGAAGAATCTCCGACCCCATAAAGT----SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
AGAAAT-------TCTGTAAA--CACT-----------------TCACAATTAAATA---------------------CTGATTCAAAAA-----------ATG---------------T-----------------------------------------------------------------------------------------------------------------TG-----CTATG----TTA--------------------------------------------------AATTTAGTGTAAAATATTACGAAT---TCAAAGTATTTTG------------------------------------------------------------------TTTAGC------------------AATTTTC-----------AATGA--------------------------------------------------------------------------------------------------------------------------------TTTGCT--A------------------------------AGTTTTG----T-T------------AA----------TTA------------------------------------------------C-TGA--------------C--AATTATTATACCATACACCCAT-------AGGGTGAAATGGTATATTAAAGTCGCCA-------AAATGTATGTAACAGGCAGAAGGAAGCATCTCCGACCCCACAAAGT----SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGTATGTAACAGGCAGAAGGA..........................24200.20400040
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATTATACCATACACCCAT-------A....................................................................................22200.05101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCCAT-------AGGGTGAAATGGTATATTAAAG...............................................................29200.05101000
dp5
CAGCAAGAGAAC-TCCCCG----------------------------TAAATGAGTACGATGTACTCATGTAAA-TTAA-G-TTTA-----------AAGAACA---------------T----------TCTT------------------------------------------------------------------------------------------CG-----------------------------------G---------------------------TGACATT-ATTTT-----------------------T---ATAAATTATACTA------------------------------------------------------------------GGCAAC------------------AAAATTT-----------AACAT--------------------------TTTACTTACTTTTCTAA-GCA---------------------AACCAACGTTTTCTGAT---------------------------------------------------AGATTTGGC----------------------------------------------------------------------------------------------------------------------GCT---------A--ACATTTTATACCCGATACACAA----AA-TGAGTATTGGGGTATATTAGATTTGTGGTAAAAGTGGATGTGTGTAACGTCCAGAAGGAAACGTTTCCGACCCCATAAAGT----SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTTCTGAT---------------------------------------------------AGATTTGGC----------------------------------------------------------------------------------------------------------------------GCT---------.....................................................................................................................2220.5010100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGC----------------------------------------------------------------------------------------------------------------------GCT---------A--ACATTTTATACCCA....................................................................................................2220.5010000000100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATTTGTGGTAAAAGTGGAT..............................................21200.3060000000600
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAA----AA-TGAGTATTGGGGTATA.....................................................................2340.2510010000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGTGTAACGTCCAGAAGGAAA........................2490.2220200000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTAAAAGTGGATG.............................................19200.2040000400000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGAAACGTTTCCGACCCCATAAAG.....2750.2010000000100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGTAAAAGTGGATGTGTGT........................................23200.1530000300000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCCAGAAGGAAACGTTTC..................2070.1410000001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTGTAACGTCCAGAAGGAAA........................2390.1110100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGTGGATGTGTGTAAC.....................................19200.1020200000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-TGAGTATTGGGGTATATTAG.................................................................22200.1020000000020
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAGAAGGAAACGTTTCCG................20100.1010000001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGAAACGTTTCCGACCCC...........20140.0710001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGTGGATGTGTGTAACGTC..................................21200.0510010000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTAAAAGTGGATGTGTGTAAC.....................................27200.0510010000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGTAAAAGTGGATGTGTG.........................................21200.0510000000001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAAGGAAACGTTTCCGAC..............20200.0510000001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTAAAAGTGGATGTGTGTA.......................................22200.0510100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTAAAAGTGGATGTGA..........................................22200.0510010000000
droPer2
GCAGTC--------CCTTATA--TACTC---GCACCAG------------------------------------CCAGCGTGTGCGAAAG-----------GCT---------------G--------------------------------------------------------------GGCTATACTAGT----------------------------TTTC-----------------------------------TAG-----------------------------------------------------------------------------------------------------------------------------ATATGTTGATTATATTTGTTTATTTAAAACTAATCAGT--------------------------------------------------------------------------------------------------------------------------------------------TCCA------G---------------GG---CTATAA-TCT--ATGTGTGAGT---------------GGTT------------------------------------------------------------------------C-CGTTTAGC---------A--CATTTTTATACCCGATACTCAA----AA-TGAGTATTGGGGTATATTAGATTTGTGGTAAAAGTGGATGTGTGTAACGTCCAGAAGGAATCGTTTCCGACCCTATAAAGT----SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACGTCCAGAAGGAATCGTTTCCGA...............26200.153030000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---------A--CATTTTTATACCCGATAC................................................................................................21170.061010000
droAna3
AGTGCC----------ATAGG--AAAAT---GCT----------TGGGGAAA-------------------------------------A----------ATCA------------------------------------------------------------------T--------------------------AGAAGACCACAAAT-------------TA-----------------------------------ATGTAGGAAATCGGAGA-------------------------------------------------------------------------------------------------T------------------------------------------------------------TTC-----------AAC----------------------------------------------TTTGGA-------------------------------------------------------------------------------------------------------------------------------TGAGAATTT-------CA-AAGATATGGTAA------------------------------------------------C-TGTTAGAT--------GT--CATTTTTATACCCTTG------------------AAGAAGGTATTATAATTTTGGTC-------AAAAGTGTGCAACGCAGTGAAGAAGACATCTCCGACCCTATAAAGT----SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAA------------------------------------------------C-TGTTAGAT--------GT--CATTTTTATACCC.....................................................................................................2720.501010000
...............................................................................................................................................................................................................................................................................TCGGAGA-------------------------------------------------------------------------------------------------T------------------------------------------------------------TTC-----------AAC----------------------------------------------TTTGGA-------------------------------------------------------------------------------------------------------------------------------TGAGAA.................................................................................................................................................................................................................2630.331100000
...............................................................................................................................................................................................................................................................................TCGGAGA-------------------------------------------------------------------------------------------------T------------------------------------------------------------TTC-----------AAC----------------------------------------------TTTGGA-------------------------------------------------------------------------------------------------------------------------------TGAG...................................................................................................................................................................................................................24200.255140000
...................................................................................................................................................................................................................................................................................AGA-------------------------------------------------------------------------------------------------T------------------------------------------------------------TTC-----------AAC----------------------------------------------TTTGGA-------------------------------------------------------------------------------------------------------------------------------TGAGA..................................................................................................................................................................................................................2180.252000020
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGTGAAGAAGACATCTCCGACCCTA..........27200.102200000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCAGTGAAGAAGACATCTCCGA...............24200.102200000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCAACGCAGTGAAGAA..........................19200.051000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAACGCAGTGAAGAAGACATC....................23200.051010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTC-------AAAAGTGTGCAACGCAGT................................23200.051010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAACGCAGTGAAGAAGACATCTC..................25200.051010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGTGCAACGCAGTGAAGAAGAC.......................24200.051010000
droBip1
GAGCCAT------GCCAAATA--T--AT---GCT----------TGCA------------------------AGCTTAATT--TTT-----------TGGAACA---------------T------------------------------------------------------------G--------------------------GAACAACAACTCAGTTTTG-----------------------------------T----------------------------TTAAATGTT--A--------------------------------------------------------------------------------------------------------------------------------------TT-----------TATAAACTTACCATAGTCCACAAATATGTGGATTCAATTGGTTTTCCTATTTTGAG-------------------------------------------------------------------------------------------------------------------------------GGTTATTTT-------TA-AAGG--TGGTACTTAGGCCCCTCTTTAAT----------G------------------A-A------TCT---------G--AATTTTTATACCCTTG------------------CAGAGGGTATTATAATTTTGTCC-------AAAAGTGTGCAACGCAGTGAAGGAGACATCTCCGACCCTATAAAGT----SizeHit CountTotal NormTotal
No Reads
droKik1
GAATAAT------GCAATAAA--C--TA---A-T----------TAGA-------------------------------------------------------------------------------------------------------------GGTAAATT---TAT--------------------------TCAAGTACAAAAATGCTAT--------TAATGAAGCTTTAATTTTACT----TTCAAC-TTA--TAT-----------------------------------------------------------------------------------------------------------------------------AAATTCTG----------------A------------------GA-TTTT-----------AACAA------------------------------------------------------------------------------------------------------------------------------------------------TTAAAAA---------------------------TTGAATCT-------AA------------------------------------------------------------------ACGAT--------AT--GGTTTTTATACCCTTG--------------------CAGGGTATTATAATTTCAGTC-------AGAAGTTTGCAACGCAGTGAAGGAGACGTTTCCGACCCCATAAACC----SizeHit CountTotal NormTotal
No Reads
droFic1
CAACTT---------CTTAAA--AATT-----TT---------------------------------------------------------------------------------------AGAA-AGC-AACTCCATTGTTTCTAAAACATTTAAATGTTAATTTACAATTAGAAAAATTGTTCTTTAATAGTCATATATTCC------------------------------------------------------------------------------------------------------------------------------------------AAAA-------------------------------------------------------AATTTTTTTATTGATAAATAATAAAA--------------------------------------------------------------------------------------------------------------------------------------------TCTTT-----G---------------AG---ATTTAACTTA--ATGTTTGATTTTAT--------TATTTA-CC-------AAAT--------------------------------------G-------------------------AAATTAATTTTGTGTTATATTTGTATACCCTTG------------------C------------AATTTCAGTC-------AGAAGTTTGCAACGCAGAGAAGGAGTCACCTCAGACCCCATAAAGT----SizeHit CountTotal NormTotal
No Reads
droEle1
GGGAAAC------TCAGCGAC--TACCT---------------------------------------------------------------------------T---------------TTCCAAACG-----------------------------------------------------------------------------------------------------AGCCTT-----CTGCT----CCGCAGATAA--CTCATGTGAATCGGACG---------------------------------------------------------------------------------------------------------------------AAA-----------------------------------------------------------------------------------TTTCATTTATTTGCATATCCGGAGGAAGGAGATTAAAATTTTCCT--------------AAAAATCGATTTCTAAA------------------------------------------TATAAATCT----------------------------------------------------TGG------------------------------------------------C-TTAAAGGT--------GT--TATTTTTATACCCTTG------------------CAGAGGGTATTATAATTTCAGTC-------AGAAGTTTGCAGCGCAGTGAAGGAGACATCTCAGACCCTATAAAGT----SizeHit CountTotal NormTotal
No Reads
droRho1
AACTGAT------TCTATAAA--AA--T---ACT----------TAAA-------------------------------------------------------------------------------------------------------------GGCAAAAC---AATCAAAAAAAAT--------------------------ATATAATAA------------------------------------------------------------------------------------------------------------------------------------------------CCATGTTATTTAGAATTTCCAATTTAATTAAACGCAG----------------A------------------AATGTTC-----------AATAC--------------------------------------------------------------------------------------------------------------------------------TTTGTT---------------------------G-----AGGTTTAAAA-T-T-A-----TTTATT---------------------------------------------------------------------AT----------T--ACTATTTATACCCGTTACTCGT-------AGAGTAAAAGGGTATATTGTATTCGTGC-------AAAAGTATGTAACAGCTAGAAGGAAGCGTTTCCGACCCTATAAAGT----SizeHit CountTotal NormTotal
No Reads
droBia1
GGGTCAT------GTAACAAA--AACCT---GTTTTTGAGCGAA-----------------GTGG----------------------------------------------------------AG-AAGACATTGTACGAT-----------------------------------------------------T-----------------------------------------------------------------------------------------------GAAATT-ATT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCCATCAGCTTCTTATTA--------------ATATGGCTATATA-------------TGTAA--GCCTACTCAATGTATATTC-------------------------------------------------------------------------------------------------------G-TGTCTAAT--------AT--AATTTGTATACCCTTG------------------CAGAGGGTATAATGATTTCAGTG-------AGAAGCTTGCCACGCAGTGAAGGAGACGTTTTCGACCCCATAAAGT----SizeHit CountTotal NormTotal
No Reads
droTak1
TCCCGA------------AGA--CACCG---GTTCTACAA----------------------------------------------------------------------------------GAA-ATG---------------------------------------------------------------------------------------------------------T-----CTCCTGTTCATCGGT----ATACTTTTTACCGCGAAAGTTTCTTTCTGCCGACATT-GTTTT--------------------------------------------------------------------------------------------------------------------------------------TTT-----------ATCAG------------------------------------------------------------------------------------------------------------------------------------------------TTTGAA--------------------------------------------------------------------------ATTTTTTTTAT-ATCATCAGCTGTAAGTATGAC-TGTTTAAT------------GGTATTTATACCCGTTACTCGT-------AGAGTAAAAGGGTATACTAGATTCGTGC-------AAAAGTATGTAACAGCTAGAAGGAAGCGTTTCCGACCCCATAAAGT----SizeHit CountTotal NormTotal
No Reads
droEug1
GCGCAAG------CCCCTC-TGCCGGGAGTTACT----------TGGCTC-----------------------------------------------AGACCCA------------------------------------------------------------------C------------------------------------C--------------------------------------------------------------------------------------------------------------------------------------GAGGGGTG---AATTAA-ACTTTTTATTTAT--TTTTTAATTT------------------------------------------------------------TATATAGAGCG--------------------------------------------------------------------------------------------------------TGATTTCGTTTTC--------------------------G--------ACTTCTTTG-----AG--------GGTTGT-CC-------GAGG--------------------------------------GGGCGT-----------CGT-T------TTT---------A--CGTTTTTATACCCGTTACTCGT-------AGAATAAAAGGGTATATTAGATTCGTTG-------AAAAGTATGTAACAGGTAGA----AGTGTTTCAGACCCTATAAAGT----SizeHit CountTotal NormTotal
No Reads
dm3
CAAACT---------GTTA-AATAAAAAGTTAAT-------------TA------------------------------------TATAA-----------TTA---------------T-----------------------------------------------------------------------------------------------------------------TA-----TTAAT----TAA--------------------------------------------------AATTAATTATAAAATAAAACACACATATC-----------AAAACATT---AACTAA-AAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTATACAA--TAGTTAGAGT-------------TTAAT-TT-------AA-----------------------------C---------TGCTACT-----------CCC-A------TAT---------A--TCTTTTTATACCCGTTACTCGT-------AGAATAAGGGGGTATTCTAGATTCGTTG---------AAGTGTGTAACAGGCTGAAGGAAGCGATTCTGACTGTATAAAGT----SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTTG---------AAGTGTGTAACAGGCTGAAG............................26148.004800000000000000000000000000000000000000001000100020001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000112100000000000000000000000000000000000000002000000000000030000000001000000000000000000010000000000000000000000000000000000000000000000000010000017000000001010000000000000002222000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTG---------AAGTGTGTAACAGGCTGAAG............................27143.00430000000000000000000001010000000000001000000000001000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200100200000000000000000001000000000000010200000020000003000100000100000000000000000000000000000000000000000000000000000000000000000000003000002311000000711000000000000000020000000
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droSim2
GCCCACT------CC------------------T----------ACGCGAAA-------------------------------------AACCGCCCAAAACTGCCACTTTTGAAAAAATTGTGA-ATGTTTTTTCATGAT-----------------------------------------------------T---------------------------------------------------------------------------------------------------TT-ATTAC-------------------------------------------TTTACTTTGGAATATTTAGGTATTTAA---T-----------------------------------------------AATATTAAAAAAATTT-----------ATAAT--------------------------TTTATT-------------------------------------------------------------------------T-----------------ATTAATTAG--GTTTATTTGATGTTCATTT--------T-----AG--------AGTTAT-TC-------AAGA------------------------------------------------------------------ACTGATTA--TAC--AATTTTTATACCCATTACTCGT-------AGAGTAAAAGGGTATACTAGTTTCGTTG-------AAAAGTATGTAACAGGTAGAAGAAAGCGTTTCCGATTATATAAAATATATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
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..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTG-------AAAAGTATGTAACAGGTAGAAGAA..........................2830.33100000010000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTATACCCATTACTCGT-------A....................................................................................1940.25100000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTTCGTTG-------AAAAGTA...........................................1740.25100000000001000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG-------AAAAGTATGTAACAGGTAGAAGA...........................2540.25100000010000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGTAAAAGGGTATACTAGTTT..............................................................2340.25100000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATACTAGTTTCGTTG-------..................................................1640.25100000010000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTG-------AAAAGTATGTAACAGGTAG...............................26170.24400000020100001000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTG-------AAAAGTATGTAACAGGTAGAA.............................28140.21300000010010010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGTATGTAACAGGTAGAAGT...........................23200.20400000000000022000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGTATGTAACAGGTAGAAGAAAT........................2650.20100000010000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTAAAAGGGTATACTAGT................................................................2050.20100000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACAGGTAGAAGAAAGCGTT....................2150.20100000001000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAAGGGTATACTAGT................................................................1860.17100000000001000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTAGAAGAAAGCGTTTC..................1960.17100000000001000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGGTAGAAGAAAGCGTT....................2060.17100000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACAGGTAGAAGAAAGCG......................1960.17100010000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGGTATACTAGTTTC.............................................................1860.17100000000001000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTG-------AAAAGTATGTAACAGGTAGAA.............................25180.17300000002100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGGGTATACTAGTTTC.............................................................1960.17100000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTAAAAGGGTATACTAGT................................................................1960.17100000000001000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGTATGTAACAGGTAGAAGAAT.........................2570.14100000000000010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGTATGTAACAGGTAGAAGAT..........................2470.14100000000000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGGGTATACTAGTT...............................................................1770.14100000000001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGGTAGAAGAAAGCGTTT...................2080.13100000000001000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGTATGTAACAGGTAGAAGAAC.........................2580.13100000000000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGGTAGAAGAAAGC.......................1780.13100000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAACAGGTAGAAGAAAG........................1880.13100000000001000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGTATGTAACAGGTAGAAGATT.........................25100.10100000000000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTAGAAGAAAGCGTT....................17100.10100000000001000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGTATGTAACAGGTAGAAGAATT........................26100.10100000000000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTTG-------AAAAGTATGTAACAGGTAGAAG............................28110.09100000000100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTAGAAGAAAGCGTTT...................17120.08100000000001000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTAGAAGAAAGCG......................15140.07100000000001000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTG-------AAAAGTATGTAACAGGTAGAAG............................26140.07100000000100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTTG-------AAAAGTATGTAACAGGTAGAA.............................27140.07100000000010000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTG-------AAAAGTATGTAACAGGTAGAAG............................25160.06100000000100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGAAGAAAGCGTT....................15190.05100000000001000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGTATGTAACAGGTAGAAGACTT........................26190.05100000000000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTG-------AAAAGTATGTAACAGGTAGAA.............................24200.05100000000100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTATGTAACAGGTAGAA.............................19200.05100000000001000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTG-------AAAAGTATGTAACAGGTA................................21200.05100000000010000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTTG-------AAAAGTATGTA.......................................17200.05100000000001000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTG-------AAAAGTATGTAACAGGTAGA..............................24200.05100000001000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTG-------AAAAGTATGTAACAGGTC................................25200.05100000000010000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGTATGTAACAGGTAGAA.............................21200.05100000000000010000
droSec2
AATTCC----------GAAAA--AAGTT---GTATCAGAATAGA-----------------ATAG-----------------------------------AATA---------------CCAGTA-AGG-T----------------------------------------------------------------------------------------------------ACTC-----CTTTC----TTTAAA----TTAGTTATTGTATTATA-----------------------------------------------------------------------------------------------------------------------------AATTTGTTTATGTATAAATAATAATA--------------------------------------------------------------------------------------------------------------------------------------------TTTATTAATAATGATATTTAAT--A------------------------------AG-------T---TATTATTATAAATAA----------TT-------------------------------------A-----TTATAAA-TAATAACTTATT--------CCATGTTATACCCGTTATTCGT-------AGAGTAAAAGGTTACACTAGATTCGTTG-------AAAAGTTTGTAACAAGCAGAAGAAAGCGTTTCCGAT-ATGTAAGGT----SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATTATAAATAA----------TT-------------------------------------A-----TTATT.........................................................................................................................................2250.2010100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTATTCGT-------AGAGTAAAAGG..........................................................................2190.1111000
droYak3
TAAATAA----C-TGTGCGAA----------------------------------------GTAA------------------------------------ATA---------------CTACTATAG-----------------------------------------------------------------------------------------------------ATACTC-----CTACT----TTCAGA-TTA--TTC-----------------------------------------------------------------------------------------------------------------------------ATATCCAGATTATATTTATTTCAAT------------------AAACTTT-----------AACAA------------------------------------------------------------------------------------------------------------------------------------------------TTTAAATTA--ATGCCTGAAT-------------T------------------------------------------------------------------------------------TAT--------TT--TATATTTATACCCGTTACTCGT-------AGAGTAAAAGGGTATACTAGATTCGTTG-------AAAAGTATGTAACAGGCAGAAGGAAGCGTTTCCGACCATATAAAGT----SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droEre2
AGACCAA----T-TTGTTA-AAAGAAAT---GCT----------AATCAACA-------------------------------------A----------ATCA------------------------------------------------------------------T----------------------------------------------------------------T----------------------------------------------------------------------------------------------------------AAATTAAC---AA------------------------------------------------------------------------------------------------------------------------------TTAAATTATTTTACATATTTTGTA------------TGTTTTCAA--------------AAAAGTGGATTTTTATGTAATTATTTTGTTTCC--------------------------T--------ATTT-------------------------------------------------------------------C---------TGCTACT-----------AAA-ACATATAAT----------C--ACTAATTATACCCGTTACTCGT-------AGAGTAAAGGGGTATACTAGATTCGTTG-------AAAATTATGCAACAGGCAGAAGGAAGCGTTTCCAATCATATAAAGT----SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGCAACAGGCAGAAGGAAGCGTT....................2531.3340000004
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGGGTATACTAGATTCGTT..........................................................22180.0610001000

Generated: 05/18/2015 at 01:20 AM