ID:

dmo_1745

 Coordinate:

scaffold_6540:611933-612083 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-15.6 -15.2 -14.9

Flybase annnotation

CDS [Dmoj\GI23807-cds]; exon [dmoj_GLEANR_8985:3]; intron [Dmoj\GI23807-in]

Repeatable elements

NameClassFamilyStrand
VEGE_DWDNAhAT-Tip100+
mature
  1. scaffold_4193:41514-41538 -
  2. scaffold_6482:2458757-2458781 +
  3. scaffold_6496:286461-286485 -
  4. scaffold_6496:3980649-3980673 +
  5. scaffold_6496:7517838-7517862 +
  6. scaffold_6496:22296044-22296068 +
  7. scaffold_6498:361960-361984 -
  8. scaffold_6498:412864-412888 +
  9. scaffold_6500:1746833-1746857 +
  10. scaffold_6500:6046240-6046264 +
  11. scaffold_6500:29235236-29235260 +
  12. scaffold_6500:30583418-30583442 +
  13. scaffold_6500:32149392-32149416 +
  14. dmo_1745  scaffold_6540:612059-612083 +
  15. scaffold_6540:1466452-1466476 +
  16. scaffold_6540:1691458-1691482 +
  17. scaffold_6540:7283581-7283605 -
  18. scaffold_6540:7321834-7321858 +
  19. scaffold_6540:11501656-11501680 -
  20. scaffold_6541:1508129-1508153 +
  21. scaffold_6431:52896-52920 -
  22. scaffold_6431:82980-83004 -
  23. scaffold_6665:5128-5152 -
  24. scaffold_6496:648210-648234 -
  25. scaffold_6500:28778878-28778902 -
  26. scaffold_6540:560837-560861 -
star
  1. scaffold_7:2532-2559 -
  2. scaffold_4193:41592-41619 -
  3. scaffold_6431:83058-83085 -
  4. scaffold_6473:2229072-2229099 +
  5. scaffold_6482:525674-525701 -
  6. scaffold_6496:3980568-3980595 +
  7. scaffold_6496:7517757-7517784 +
  8. scaffold_6496:22295963-22295990 +
  9. scaffold_6498:2815498-2815525 +
  10. scaffold_6498:3304432-3304459 +
  11. scaffold_6500:1746752-1746779 +
  12. scaffold_6500:6046159-6046186 +
  13. scaffold_6500:29235155-29235182 +
  14. scaffold_6500:30583337-30583364 +
  15. scaffold_6500:32149311-32149338 +
  16. dmo_1745  scaffold_6540:611978-612005 +
  17. scaffold_6540:1466371-1466398 +
  18. scaffold_6540:1691377-1691404 +
  19. scaffold_6540:7321753-7321780 +
  20. scaffold_6541:1508048-1508075 +
  21. scaffold_6665:5206-5233 -

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TTGCATAGCATATTAGAAAGCTTACCTATTCTTCAGTTGTAGTATTAATTCTACACAAACCTCAGTACATTTACATTTAAAATATCGAAGCGAATTTTGTTATAAGTTCGCTTGCATTTTAGCTAAATTTAATATTTGAAAATAGCCAGATTTGTAGCTAATAGCTGTTTGAAAATTTTTGTAGCAATCGGCCTTAAAAAGTAGCCAGATCTAGCTACAAAATAGCTGATTCGGCAACACTGCCGGCTGGC
***********************************************************************************************.((((((((((((((...((...(((((((....(((.(((((........)))))))))))))))..))....))))....))))))))))..............************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body		 V041
embryo
................................................................................................................................................................................TTTTGTAGCAATCGGCCTTAAAAAG.................................................. 25 0 20 1.05 21 19 1 1 0
................................................................................................................................................................................TTTTGTAGCAATCGGCCTTAAAAAGT................................................. 26 0 20 0.35 7 5 1 0 1
...............................................................................................TTTGTTATAAGTTCGCTTGCATTTTAGC................................................................................................................................ 28 0 20 0.20 4 3 1 0 0
................................................................................................................................................................................TTTTGTAGCAATCGGCCTTAAAAAGTAG............................................... 28 0 20 0.20 4 0 0 4 0
.................................................................................................................................................................................................................TCTAGCTACAAAATAGCTGATTCGGCAAC............. 29 0 20 0.20 4 1 3 0 0
...............................................ATTCTAGACAAACCTATGTAC....................................................................................................................................................................................... 21 3 6 0.17 1 1 0 0 0
................................................................GTAATTTCACATTTAAAATATC..................................................................................................................................................................... 22 3 19 0.16 3 3 0 0 0
................................................................................................................................................................................TTTTGTAGCAATCGGCCTTAAAAAGTA................................................ 27 0 20 0.15 3 3 0 0 0
............................TTCTTCAGTTGTAGTATTAATTCT....................................................................................................................................................................................................... 24 0 20 0.15 3 2 0 0 1
.................................................................................................................................................................................TTTGTAGCAATCGGCCTTAAAAAG.................................................. 24 0 20 0.15 3 3 0 0 0
..................................................................................TATCGAAGCGAATTTTGTTATAAGT................................................................................................................................................ 25 0 20 0.10 2 1 1 0 0
..........................................................................................................TTCGCTTGCATTTTAGCTAAATT.......................................................................................................................... 23 0 20 0.10 2 2 0 0 0
.................................................................................................................................................................................TTTGTAGCAATCGGCCTTAAAAAGTAG............................................... 27 0 20 0.10 2 2 0 0 0
.........................CTATTCTTCAGTTGTAGTATTAATTC........................................................................................................................................................................................................ 26 0 20 0.10 2 2 0 0 0
..................................................................................................................................................CAGATTTGTAGCTAATAGCTGTT.................................................................................. 23 0 20 0.10 2 2 0 0 0
................................................................................................................................................................................TTTTGTAGCAATCGGCCTTAA...................................................... 21 0 20 0.10 2 1 1 0 0
.................................................................................................................................................................................................................TCTAGCTACAAAATAGCTGATTCGGC................ 26 0 20 0.10 2 2 0 0 0
............................TTCTTCAGTTGTAGTATTAATTCTA...................................................................................................................................................................................................... 25 0 20 0.05 1 0 0 0 1
............................................................................................AATTTTGTTATAAGTTCGCT........................................................................................................................................... 20 0 20 0.05 1 1 0 0 0
..........................TATTCTTCAGTTGTAGTATTAATTCTA...................................................................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0
.................................................................................................................................TAATATTTGAAAATAGCCAGATTTGTAGC............................................................................................. 29 0 20 0.05 1 1 0 0 0
................................................................................................................................................................................TTTTGTAGCAATCGGCCTTA....................................................... 20 0 20 0.05 1 0 1 0 0
..............................CTTCAGTTGTAGTATTAATTCTA...................................................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0
....................................................................................TCGAAGCGAATTTTGTTATAAGTTCGC............................................................................................................................................ 27 0 20 0.05 1 1 0 0 0
..............................................................................................................................................TAGCCAGATTTGTAGCTAATAGCTGT................................................................................... 26 0 20 0.05 1 1 0 0 0
...........................................................................................................................................................................................................ACCAGATCTAGCTACAAAATAGC......................... 23 1 20 0.05 1 0 1 0 0
............................TTCTTCAGTTGTAGTATTAATTCTACACA.................................................................................................................................................................................................. 29 0 20 0.05 1 1 0 0 0
.............................................................................................ATTTTGTTATAAGTTCGCT........................................................................................................................................... 19 0 20 0.05 1 1 0 0 0
.............................................................................................................................................................................................GGCCTTAAAAAGTAGCCAGATCTAGC.................................... 26 0 20 0.05 1 1 0 0 0
............................................................................................................................................................GCTAATAGCTGTTTGAAAAT........................................................................... 20 0 20 0.05 1 1 0 0 0
...........................................................................................................................................................................................................GCCAGATCTAGCTACAAAATAGCTGA...................... 26 0 20 0.05 1 1 0 0 0
..GCATAGCATATTAGAAAGCTTACC................................................................................................................................................................................................................................. 24 0 20 0.05 1 0 1 0 0
..............................................................................................TTTTGTTATAAGTTCGCTTGC........................................................................................................................................ 21 0 20 0.05 1 1 0 0 0
..............................................................................................TTTTGTTATAAGTTCGCTTGCATT..................................................................................................................................... 24 0 20 0.05 1 1 0 0 0
.........................CTATTCTTCAGTTGTAGTATTAATC......................................................................................................................................................................................................... 25 1 20 0.05 1 1 0 0 0
.................AAGCTTACCTATTCTTCAGTTGTA.................................................................................................................................................................................................................. 24 0 20 0.05 1 0 0 0 1
................................................................................................................................................................................TTTTGTAGCAATCTGCCTTAAAAAG.................................................. 25 1 20 0.05 1 0 0 0 1
..................................................................................................................................................................................................................CTAGCTACAAAATAGCTGATTCGGCAAC............. 28 0 20 0.05 1 1 0 0 0
...............................................................................................................................................AGCCAGATTTGTAGCTAATAGCT..................................................................................... 23 0 20 0.05 1 0 0 1 0
...................................................................................................TTATAAGTTCGCTTGCATTTTAGC................................................................................................................................ 24 0 20 0.05 1 1 0 0 0
.................................................................................................................................................CCAGATTTGTAGCTAATAGCTGTTTGA............................................................................... 27 0 20 0.05 1 1 0 0 0
.........................CTATTCTTCAGTTGTAGTATTAA........................................................................................................................................................................................................... 23 0 20 0.05 1 1 0 0 0
............TTAGAAAGCTTACCTATTCTTCAGTTG.................................................................................................................................................................................................................... 27 0 20 0.05 1 1 0 0 0
................................................................................................................................................................................................................ATCTAGCTACAAAATAGCTGATTCGGC................ 27 0 20 0.05 1 1 0 0 0
...............................TTCAGTTGTAGTATTAATTCTA...................................................................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0
.............................TCTTCAGTTGTAGTATTAATTCTA...................................................................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0
.........................................................................................................................................................................................................TAGCCAGATCTAGCTACAAAATAGCTGA...................... 28 0 20 0.05 1 0 1 0 0
..........................................................................................................TTCGCTTGCATTTTAGCTAAATTTAATT..................................................................................................................... 28 1 20 0.05 1 0 1 0 0
.....................................................................................................ATAAGTTCGCTTGCATTTTAGCTAAAT........................................................................................................................... 27 0 20 0.05 1 1 0 0 0
..........................................................................................................TTCGCTTGCATTTTAGCTAAATTT......................................................................................................................... 24 0 20 0.05 1 1 0 0 0
....................CTTACCTATTCTTCAGTTGT................................................................................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0
..GCATAGCATATTAGAAAGCTTACCTA............................................................................................................................................................................................................................... 26 0 20 0.05 1 0 0 1 0
...........................................................................................................................................................................................................GCCAGATCTAGCTACAAAATAGCTGATA.................... 28 1 20 0.05 1 1 0 0 0
............................TGCTTCAGTTGTAGTATTAATTCTACAC................................................................................................................................................................................................... 28 1 20 0.05 1 0 1 0 0
..................................................................................................................................................................................TTGTAGCAATCGGCCTTAAAAAG.................................................. 23 0 20 0.05 1 1 0 0 0
...........................................................................................................................................................................................................GCCAGATCTAGCTACAAAATAGC......................... 23 0 20 0.05 1 1 0 0 0
..................................................................................................................................................CAGATTTGTAGCTAATAGCTGT................................................................................... 22 0 20 0.05 1 1 0 0 0
.......................................................................................................................................................................................................................................CGGGAATACTGCCAGCTGG. 19 3 20 0.05 1 1 0 0 0
.......................ACCTATTCTTCAGTTGTAGTATTAA........................................................................................................................................................................................................... 25 0 20 0.05 1 1 0 0 0
...........................................................................................................................................................................................................GCAAGATCTAGCTACAAAATAGC......................... 23 1 20 0.05 1 0 1 0 0
...............................................................................................................................................................................................CCTTAAAAGGTGGCCAGATCT....................................... 21 2 20 0.05 1 1 0 0 0
.TGCATAGCATATTAGAAAGCTTACC................................................................................................................................................................................................................................. 25 0 20 0.05 1 0 1 0 0
.................................................................................................................................................................................TTTGTAGCAATCGGCCTTAAAAAGTA................................................ 26 0 20 0.05 1 1 0 0 0
.............................................................................................................................................................................................................CAGATCTAGCTACAAAATAGC......................... 21 0 20 0.05 1 1 0 0 0
.................................................................................................................................................................................TTTGTAGCAATCGGCCTTAAAAA................................................... 23 0 20 0.05 1 1 0 0 0
..............................................................................................................................................TAGCCAGATTTGTAGCTAATAGCT..................................................................................... 24 0 20 0.05 1 1 0 0 0
................................................................................................................................................................................TTTTGTAGCAATCGGCCTTAAA..................................................... 22 0 20 0.05 1 1 0 0 0
...............................TTCAGTTGTAGGATTAATTCTACACATG................................................................................................................................................................................................ 28 3 20 0.05 1 1 0 0 0
.......................................................................................................................................TTGAAAATAGCCAGATTTGTAGCT............................................................................................ 24 0 20 0.05 1 1 0 0 0
............................................................................................................................................................................................................CCAGATCTAGCTACAAAATAGCTG....................... 24 0 20 0.05 1 1 0 0 0
...............................................................................................TTTGTTATAAGTTCGCTTGCATTTT................................................................................................................................... 25 0 20 0.05 1 1 0 0 0
...................................................................................................................................................................................TGTAGCAATCGGCCTTAAAAAGTAGCC............................................. 27 0 20 0.05 1 0 1 0 0
................................................................................................................................................................................TTTTGTAGCAATCGGCCTTAAAAAAA................................................. 26 2 20 0.05 1 1 0 0 0
......................................................................................................................................TTTGAAAATAGCCAGATTTGTAGCT............................................................................................ 25 0 20 0.05 1 0 0 1 0
...................................................................................ATCGAAGCGAATTTTGTTAT.................................................................................................................................................... 20 0 20 0.05 1 1 0 0 0
.....................................................................................................................................................ATTTGTAGCTAATAGCTGTTTGAAAATA.......................................................................... 28 1 20 0.05 1 1 0 0 0
...........................................................................................................................................................................................................................AAATAGCTGATTCGGCAACACT.......... 22 0 20 0.05 1 0 1 0 0
................AAAGCTTACCTATTCTTCAGT...................................................................................................................................................................................................................... 21 0 20 0.05 1 1 0 0 0
..........................TATTCTTCAGTTGTAGTATTAATTCTAC..................................................................................................................................................................................................... 28 0 20 0.05 1 1 0 0 0
...............................TTCAGTTGTAGTATTAATTCTACA.................................................................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0

Anti-sense strand reads

AACGTATCGTATAATCTTTCGAATGGATAAGAAGTCAACATCATAATTAAGATGTGTTTGGAGTCATGTAAATGTAAATTTTATAGCTTCGCTTAAAACAATATTCAAGCGAACGTAAAATCGATTTAAATTATAAACTTTTATCGGTCTAAACATCGATTATCGACAAACTTTTAAAAACATCGTTAGCCGGAATTTTTCATCGGTCTAGATCGATGTTTTATCGACTAAGCCGTTGTGACGGCCGACCG
**************************************************.((((((((((((((...((...(((((((....(((.(((((........)))))))))))))))..))....))))....))))))))))..............*********************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M060
embryo
 M046
female body
 V110
male body		 V041
embryo
 V056
head
........................................................................................TCGCTTAAAACAATATTCAAGCGAACGT....................................................................................................................................... 28 0 20 12.15 243 214 29 0 0 0
........................................................................................TCGCTTAAAACAATATTCAAGCGAACTT....................................................................................................................................... 28 1 20 2.70 54 54 0 0 0 0
.........................................................................................CGCTTAAAACAATATTCAAGCGAACGT....................................................................................................................................... 27 0 20 2.55 51 0 51 0 0 0
..........................................................................................................................................................................................TAGCCGGAATTTTTCATCGGTCTAGAT...................................... 27 0 20 1.25 25 0 24 0 1 0
..............................................................................................................................................................................................CGGAATTTTTCATCGGTCTAGAT...................................... 23 0 20 1.10 22 13 8 0 1 0
.............................................................................................................................................................................................CCGGAATTTTTCATCGGTCTAGAT...................................... 24 0 20 1.05 21 0 21 0 0 0
........................................................................................CCGCTTAAAACAATATTCAAGCGAACTT....................................................................................................................................... 28 2 20 0.90 18 18 0 0 0 0
.................TTCGAATGGATAAGAAGTCAACAT.................................................................................................................................................................................................................. 24 0 20 0.65 13 0 0 13 0 0
...................................CAACATCATAATTAAGATGTGTTTGGAG............................................................................................................................................................................................ 28 0 2 0.50 1 0 1 0 0 0
.......................................................GTTTGGAGTCATGTAAATGTAAATTT.......................................................................................................................................................................... 26 0 2 0.50 1 0 1 0 0 0
............................................................................................TTAAAACAATATTCAAGCGAACGT....................................................................................................................................... 24 0 20 0.45 9 0 9 0 0 0
......................ATGGATAAGAAGTCAACATCATAATT........................................................................................................................................................................................................... 26 0 20 0.45 9 0 9 0 0 0
...............CTTTCGAATGGATAAGAAGTCAACAT.................................................................................................................................................................................................................. 26 0 20 0.45 9 9 0 0 0 0
...............................................................................................................................................................TTATCGACAAACTTTTAAAAACATCGT................................................................. 27 0 20 0.35 7 0 7 0 0 0
..........................................................................................GCTTAAAACAATATTCAAGCGAACG........................................................................................................................................ 25 0 20 0.30 6 0 6 0 0 0
........................................................................................TCGCTTAAAACAATATTCAAGCGAACG........................................................................................................................................ 27 0 20 0.25 5 0 5 0 0 0
...........................................................................................CTTAAAACAATATTCAAGCGAACGT....................................................................................................................................... 25 0 20 0.25 5 5 0 0 0 0
...................................................................................................................................................................CGACAAACTTTTAAAAACATCGT................................................................. 23 0 20 0.25 5 5 0 0 0 0
...................................................................................................................................TATAAACTTTTATCGGTCTAAACAT............................................................................................... 25 0 20 0.20 4 0 3 1 0 0
................................................................................................................................................................................................GAATTTTTCATCGGTCTAGAT...................................... 21 0 20 0.20 4 0 4 0 0 0
.................TTCGAATGGATAAGAAGTCAACA................................................................................................................................................................................................................... 23 0 20 0.15 3 0 3 0 0 0
............................................................................................................................................................CGATTATCGACAAACTTTTAAAAACAT.................................................................... 27 0 20 0.15 3 0 3 0 0 0
........................................................................................TCGCTTAAAACAATATTCAAGCGATCGT....................................................................................................................................... 28 1 20 0.15 3 3 0 0 0 0
.............................................................................................................................................................GATTATCGACAAACTTTTAAAAACATCGT................................................................. 29 0 20 0.15 3 0 3 0 0 0
........................................................................................TCGCTTAAAACAATATTCAAGCGAACAT....................................................................................................................................... 28 1 20 0.15 3 3 0 0 0 0
..................TCGAATGGATAAGAAGTCAACAT.................................................................................................................................................................................................................. 23 0 20 0.15 3 0 2 1 0 0
...............CTTTCGAATGGATAAGAAGTCAAAAT.................................................................................................................................................................................................................. 26 1 20 0.15 3 3 0 0 0 0
..........................................................................................GCTTAAAACAATATTCAAGCGAACGT....................................................................................................................................... 26 0 20 0.15 3 3 0 0 0 0
......TCGTATAATCTTTCGAATGGATAAGAA.......................................................................................................................................................................................................................... 27 0 20 0.15 3 1 2 0 0 0
...............................................................TCATTAAAGTGTAAATTTTATAG..................................................................................................................................................................... 23 3 7 0.14 1 0 1 0 0 0
.....................................................................................................................................................................................................................CTATGTTTTATCGACTAAGCCGTTGT............ 26 1 20 0.10 2 2 0 0 0 0
...................CGAATGGATAAGAAGTCAACATCATAAT............................................................................................................................................................................................................ 28 0 20 0.10 2 0 2 0 0 0
.................TTCGAATGGATAAGAAGTCAACATCAT............................................................................................................................................................................................................... 27 0 20 0.10 2 0 0 2 0 0
.............................................................................................................................................................................................CCGGAATTTTTCATCGGTCTAGA....................................... 23 0 20 0.10 2 0 2 0 0 0
........................................................................................TCGCTTAAAACAATATTCAAGCGATCTT....................................................................................................................................... 28 2 20 0.10 2 2 0 0 0 0
..................................................................................................................................TTATAAACTTTTATCGGTCTAAACA................................................................................................ 25 0 20 0.10 2 0 2 0 0 0
.........................................................................................CGCTTAAAACAATATTCAAGCGAACGTG...................................................................................................................................... 28 1 20 0.10 2 0 2 0 0 0
............................................................................................TTAAAACAATATTCAAGCGAACG........................................................................................................................................ 23 0 20 0.10 2 0 2 0 0 0
.......................TGGATAAGAAGTCAACATCATAATT........................................................................................................................................................................................................... 25 0 20 0.10 2 0 0 2 0 0
.......CGTATAATCTTTCGAATGGATAAGAA.......................................................................................................................................................................................................................... 26 0 20 0.10 2 2 0 0 0 0
...........................................................................................CTTAAAACAATATTCAAGCGAACG........................................................................................................................................ 24 0 20 0.10 2 0 2 0 0 0
..........................................................................................GCTTAAAACAATATTCAAGCGAACTT....................................................................................................................................... 26 1 20 0.10 2 2 0 0 0 0
.............ATCTTTCGAATGGATAAGAAGTCAACAT.................................................................................................................................................................................................................. 28 0 20 0.10 2 0 1 0 0 1
..............................................................................................................................................................................................CGGAATTTTTCATCGGTCTAGGT...................................... 23 1 20 0.10 2 2 0 0 0 0
..............TCTTTCGAATGGATAAGAAGTCAAC.................................................................................................................................................................................................................... 25 0 20 0.05 1 0 1 0 0 0
.........................................................................................CGCTTAAAACAATATTCAAGCGA........................................................................................................................................... 23 0 20 0.05 1 0 1 0 0 0
.................TTCGAATGGATAAGAAGTCAAC.................................................................................................................................................................................................................... 22 0 20 0.05 1 0 1 0 0 0
.................TTCGAATGGATCAGAAGTCAACAT.................................................................................................................................................................................................................. 24 1 20 0.05 1 0 0 0 1 0
..........................................................................................GCTTAAAACAATATTCAAGCGAACGTC...................................................................................................................................... 27 1 20 0.05 1 0 1 0 0 0
..................CCGAATGGATAAGAAGTCAACAT.................................................................................................................................................................................................................. 23 1 20 0.05 1 1 0 0 0 0
......................................................................................................................................................................CAAACTTTTAAAAACATCGT................................................................. 20 0 20 0.05 1 0 1 0 0 0
...................................................................................................................................................................CGACAAACTTTTAAAAACATCGGT................................................................ 24 1 20 0.05 1 1 0 0 0 0
.............................................................................................................................................TAGCGTTCTAAACCTCGATTAT........................................................................................ 22 3 20 0.05 1 0 0 0 0 1
............................................................................................................................................................................................GCAGGAATTTTTCATCGGTCTAGAT...................................... 25 1 20 0.05 1 0 1 0 0 0
.......................TGGATGAGAAGTCAACATCATAATT........................................................................................................................................................................................................... 25 1 20 0.05 1 0 0 1 0 0
..................TCGAATGGATAAGAAGTCAAAAT.................................................................................................................................................................................................................. 23 1 20 0.05 1 1 0 0 0 0
............................................................................................................................................TTATCGGTCTTAACATCGATTATCGACA................................................................................... 28 1 20 0.05 1 1 0 0 0 0
...........................TAAGAAGTCAACATCATAATT........................................................................................................................................................................................................... 21 0 20 0.05 1 0 1 0 0 0
........................................................................................TCGCTTAAAACAATATTCAAGCGAACGGC...................................................................................................................................... 29 2 20 0.05 1 1 0 0 0 0
..............CCTTTCGAATGGATAAGAAGTCAACAT.................................................................................................................................................................................................................. 27 1 20 0.05 1 0 1 0 0 0
..............TCTTTCGAATGGATAAGAAGTCAACAT.................................................................................................................................................................................................................. 27 0 20 0.05 1 0 1 0 0 0
.................................................................................................................................................................ATCGACAAACTTTTAAAAACATCGT................................................................. 25 0 20 0.05 1 0 0 0 1 0
........................................................................................TCGCTTAAATCAATATTCAAGCGAACGTC...................................................................................................................................... 29 2 20 0.05 1 1 0 0 0 0
.............................................................................................................................................................................................CCGGAATTTTTCATCGGTCTAGATCTAGC................................. 29 3 20 0.05 1 1 0 0 0 0
........................................................................................TCGCTTAAAACAATATTCAAGCGAAGGT....................................................................................................................................... 28 1 20 0.05 1 1 0 0 0 0
.......................TGGATAAGAAGTCAACATCATAA............................................................................................................................................................................................................. 23 0 20 0.05 1 0 0 1 0 0
..........................................................................................................................................................................................................TCGGTCTAGATCGATGTTTTAT........................... 22 0 20 0.05 1 0 0 1 0 0
....................GAATGGATAAGAAGTCAACATCATAAT............................................................................................................................................................................................................ 27 0 20 0.05 1 0 0 1 0 0
.........................................................................................CGCTTAAAACAATATTCAAGCGGACGT....................................................................................................................................... 27 1 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................................AAAAACATCGTTAGCCGGAATTTTTCAT................................................ 28 0 20 0.05 1 0 1 0 0 0
...................CGAATGGATAAGAAGTCAACATCATAATT........................................................................................................................................................................................................... 29 0 20 0.05 1 0 1 0 0 0
................................................................................................................................................................CATCGACAAACTTTTAAAAACATCGT................................................................. 26 1 20 0.05 1 1 0 0 0 0
.........................................................................................CGCTTAAAACAATATTCAAGCGATCGT....................................................................................................................................... 27 1 20 0.05 1 1 0 0 0 0
...................................................................................................AATATTCAAGCGAACGTAAAATCGATTT............................................................................................................................ 28 0 20 0.05 1 0 1 0 0 0
........................................................................................TCGCGTAAAACAATATTCAAGCGAACTT....................................................................................................................................... 28 2 20 0.05 1 1 0 0 0 0
...................................................................................................................................................................CGACAAACTTTTAAAAACATCGTC................................................................ 24 1 20 0.05 1 1 0 0 0 0
...............................................................................................................................................................TTATCGACAAACTTTTAAAAACATCGTC................................................................ 28 1 20 0.05 1 0 1 0 0 0
...............ATTTCGAATGGATAAGAAGTCAACAT.................................................................................................................................................................................................................. 26 1 20 0.05 1 0 0 1 0 0
..........................................................................................GCTTAAAACAATATTCAAGCGAACGTG...................................................................................................................................... 27 1 20 0.05 1 0 1 0 0 0
.....................................................................................................................................................................ACAAACTTTTAAAAACATCTT................................................................. 21 1 20 0.05 1 1 0 0 0 0
..............................................................................................................................................................................................AGGAATTTTTCATCGGTCTAGAT...................................... 23 1 20 0.05 1 0 1 0 0 0
........................................................................................TCGCTTCAAACAATATTCAAGCGAACGT....................................................................................................................................... 28 1 20 0.05 1 1 0 0 0 0
...............................GAGTCAACATCATGGTTAAGAT...................................................................................................................................................................................................... 22 3 20 0.05 1 0 1 0 0 0
....................................................................................................................................................CTAAACCTCGATTATCGACAAACTTTT............................................................................ 27 1 20 0.05 1 0 0 0 1 0
.......CGTATAATCTTTCGAAAGGATAAGAA.......................................................................................................................................................................................................................... 26 1 20 0.05 1 1 0 0 0 0
.........................................................................................CGCTTAAAACAATATTCAAGCGAACGGC...................................................................................................................................... 28 2 20 0.05 1 1 0 0 0 0
..................................................TATGTGTTTCGAGTCATGTAAATG................................................................................................................................................................................. 24 2 20 0.05 1 0 0 0 1 0
................TTTCGAATGGATAAGAAGTCAACAT.................................................................................................................................................................................................................. 25 0 20 0.05 1 0 0 0 1 0
................................................................................................................................................CTGTCTAAACATCGATTATCGACAAA................................................................................. 26 1 20 0.05 1 1 0 0 0 0
........................................................................................TCGCTTAAAACAATATTCAAGCGAACGTG...................................................................................................................................... 29 1 20 0.05 1 0 1 0 0 0
...............................................................................................AAACAATATTCAAGCGAACGT....................................................................................................................................... 21 0 20 0.05 1 0 1 0 0 0
.........................................................................................CGCTTCAAACAATATTCAAGCGAACTT....................................................................................................................................... 27 2 20 0.05 1 1 0 0 0 0
........................................................................................TCGCTTAAAACAATATTCAAGCGTACGT....................................................................................................................................... 28 1 20 0.05 1 1 0 0 0 0
........................................................................................TCGCTTAAAACAATATTAAAGCGAACGT....................................................................................................................................... 28 1 20 0.05 1 1 0 0 0 0
......................................................................................CTTCGCTTAAAACAATATTCA................................................................................................................................................ 21 0 20 0.05 1 0 1 0 0 0
.........................................................................................CGCTTAAAACAATATTCAAGCGAACGTC...................................................................................................................................... 28 1 20 0.05 1 0 1 0 0 0
........................................................................................CCGCTTAAAACAATATTCAAGCGAACGTC...................................................................................................................................... 29 2 20 0.05 1 1 0 0 0 0
...................CGAATGGATAAGAAGTCAACATCATAA............................................................................................................................................................................................................. 27 0 20 0.05 1 0 1 0 0 0
...........................................................................................................................................................................................AGCCGGAATTTTTCATCGGTCTAGAGC..................................... 27 1 20 0.05 1 1 0 0 0 0
................TTTCGAATGGATAAGAAGTCAACA................................................................................................................................................................................................................... 24 0 20 0.05 1 0 1 0 0 0
....................................................................................................................................ATAAACTTTTATCGGTCTAAACATC.............................................................................................. 25 0 20 0.05 1 1 0 0 0 0
..................TCGAATGGATAAGAAGTCAACATCAT............................................................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0
...................................................................................................................................................................CGACAAACTTTTAAAAACATCGTTA............................................................... 25 0 20 0.05 1 1 0 0 0 0
.................TTCGAATGGATAAGAAGTCAACATC................................................................................................................................................................................................................. 25 0 20 0.05 1 0 0 1 0 0
............AATCTTTCGAATGGATAAGAAGTCAA..................................................................................................................................................................................................................... 26 0 20 0.05 1 1 0 0 0 0
..................TCGAATGGATAAGAAGTCGA..................................................................................................................................................................................................................... 20 1 20 0.05 1 1 0 0 0 0
............................................................................................................................................TTATCGGTCTAAACATCGATTATC....................................................................................... 24 0 20 0.05 1 1 0 0 0 0
......................ATGGATAAGAAGTCAACATCATAATTT.......................................................................................................................................................................................................... 27 1 20 0.05 1 0 1 0 0 0
.............................................................................................................................................................................................CCGGAATTTTTCATCGGCCTAGAT...................................... 24 1 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6540:611883-612133 + dmo_1745 TTGCAT-AGCAT-ATTAGAAAGCTTACCTATTCTTCAGTTGTAGTATTAATTCTACACAAACCTCAGTACATT--------------------TACAT------------------TTAAAA---T--ATCGAAGCG---AATTTTGTTATA---------AGTTCGCTTG------CATTTTAGCTAAATTTAATATTTGAAAATAGCCAGATTTGTAGCTAATAGCTGTTTGAAAATT-TTTGTAGCAATCGGCCTTAAAAAGTAGCCAGATCTAGCTACAAAATAGCTGATTCGGCAACACTGCCGGC----TGGC
droVir3 scaffold_13050:924686-924815 + TAAATC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTTAAAAATCCAGAATTTCCGCTGTCCGCTGTTTTTAAATTATTTCCCGCAGTCAGACTTTTAAAAAAGCCAGATCAGACGGGAAAATATCTGAATTGGCAACACTGGTGACGCCGTGGC
droWil2 scf2_1100000004943:1367074-1367313 - TTGCAT-AAAAT-TTAAGAAGGCTTACCTTTTCTTCAGTTGGTGTATTAATTCTTTACGAAAATCGGTACATTTGATTCGAACTTGAGATTCCTCAGTTCTGTCCAGATTTAACGTTTAG---------------------------------------------CACTTT------TATTACAGCTAATTGCAATTTTTGAAAATAGCTAAATTTGTAGCTAATAGCTGTTTTAAAATT-TTTGTAGCAAACAACCTTAAAAATCATCCAAATTTAGCTACAAAGTTGCTGAT-------------------------
dp5 2:14333009-14333186 + TTACAATC-AAA------------------------------------------------------------------------------------------------------------TC---AGAATCAAAAAT---GGTTTTGTTCTAA---------ATTTTTTTAAGTTAA--AATAAGCTAAAAG--AAATTTGAAATAAGCTAGATATCTCGCTGTAAGCAATGCAAATACT-TTTCAAGCTATTCGATTTAAAAATAAACAAAATCTAGCTTAAAAAAAGCTAAAATGGCAACAATGC------------
droPer2 scaffold_6:3482695-3482861 + TACTATTT-ACATATAT--ACTTATATATATT--------------------------------------------------------------ATAT------------------TTATTA---T--A---ATATG---AATTTT-TTAAA---------ATTTTTTTTT------TATTT----------------TAATAAATATTTTTAATTCTAG----TAAC--------CATT-TTTCTGGCAATAGAACTTTAAAAATAGCCAGAGCTAGCTATAAAGCAGCTGAATTGGCAGCACTG-------------
droAna3 scaffold_13337:10297890-10298012 - TA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGAAGT--TTATTTTAAAATAGCTAGATTTATAGCTAGTAGCAATTTCTTAATT-TTTCTAGCATTCGGCCTTTCAAAATGGCTAGAACTAGCCATAAAATTGCTAAACTGGCAACACTGTC-----------
droBip1 scf7180000393690:855-1099 + TTCTTT-GGTAT-ATCG--ATGGTTATTTATTATTCAATTGGAAAAATACTACAAAATA-----------------TAAAAGTTTGGCATCCCAAAGT------------------TTAAAAATAC--ATGAAGGTG---TCAGATGCCATT---------AAATAGCT------AAA-ATCACGCCAATTT--TTCTTAGAAAATAGCTATAATTCCCGCTAACCGCTAGTTTGAAATT-TATCCAGCATTTTGCTTTTGAAAACCGCCAGATCTAGTGGGGAAATAGCTAAATTGGCAACACTGCC-----------
droKik1 scf7180000301335:5335-5496 + TTTTCTTT-AAA------------------------------------------------------------------------------------------------------------AG---A--GT------------CTTGATGATTTTGTTCGGAAAGTCGTTAT------C-----ATTTGAATA--A----AATAAAAAGCCAGAATTCCCGCTGCCCGCTGTTTGTAAATT-TTTCTAGCAAATGGCATTCAGAAAAAGCCAGATTTTACGGGAAAAAAGCGACTCTGGCAACAGTG-------------
droFic1 scf7180000453714:2302-2482 - TACAAT-CAAAA--------------------------------------------------------------------------------------------------------------------AACAAAACA---TATTTTGTTATAA---------ATTTTTTTAAGCCGA--AATTAGCTAAATG--AAATTTGAAATAAGCCAGATTTTAAGCTATATGCATTTCAAGTATT-TTTCAAGCTATTTCATTTTAAAATATGCTAAATCTAGCTTGAAATAAGCTAAAATGGCAACAATGATGGA----CAGC
droEle1 scf7180000491209:10252-10418 - ATCGAA-AAAAA-AT-------------------------------------------------------------------------------------------------------------------------------TTTTGTTATAA---------ATTTATTTAAGCCGA--AATAAGCTAAATG--AAATTTGAAATAAGCCAGATTTTAAGCTATATGTATTTCAAGTATT-TTTCAAGCTATTTCATTTTAAAATATGCTAAATCTAGCTTGAAATAAGCTAAAATGGCAACAATGCTG---------C
droRho1 scf7180000769623:2948-3110 + AAAATA---------------------------------------------------------------------------------------------------------------------------ACAAAATGTTTATTTTTGTAATA---------AAGTTGCT------AAA---ATTGCAAAAAA--AATATGAAAAGTTGCTAGATTTGTTGCTAATAGCAAATCGAAAAAA-AAT--TGTAAA-TTTTTTTAAAAGTTGCTAGATCTAGCAACTAAATAGCTAAACTGGCAGCCCTGCTGG---------
droBia1 scf7180000302239:31644-31765 + CTAAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------TA----------------------------TTTTTAAAAATGGGCTAGATTTATGGCTATAGGCTATCTACAAATT-TTATAAGCTAGATCATTTAAAAACAGGCTAGATCTAGCCTGAAATAGGCTAAACTGGCAACACTGCCG----------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
TTGCAT-AGCAT-ATTAGAAAGCTTACCTATTCTTCAGTTGTAGTATTAATTCTACACAAACCTCAGTACATT--------------------TACAT------------------TTAAAA---T--ATCGAAGCG---AATTTTGTTATA---------AGTTCGCTTG------CATTTTAGCTAAATTTAATATTTGAAAATAGCCAGATTTGTAGCTAATAGCTGTTTGAAAATT-TTTGTAGCAATCGGCCTTAAAAAGTAGCCAGATCTAGCTACAAAATAGCTGATTCGGCAACACTGCCGGC----TGGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...............................................................................................................................................................................................................................................T-TTTGTAGCAATCGGCCTTAAAAAG......................................................25201.05211900011
...............................................................................................................................................................................................................................................T-TTTGTAGCAATCGGCCTTAAAAAGT.....................................................26200.357510010
...............................................................................................................................................TTTGTTATA---------AGTTCGCTTG------CATTTTAGC.....................................................................................................................................28200.204300010
...............................................................................................................................................................................................................................................T-TTTGTAGCAATCGGCCTTAAAAAGTAG...................................................28200.204000004
.................................................................................................................................................................................................................................................................................TCTAGCTACAAAATAGCTGATTCGGCAAC.................29200.204100030
...............................................................................................................................................................................................................................................T-TTTGTAGCAATCGGCCTTAAAAAGTA....................................................27200.153300000
..............................TTCTTCAGTTGTAGTATTAATTCT.........................................................................................................................................................................................................................................................................24200.153210000
.................................................................................................................................................................................................................................................TTTGTAGCAATCGGCCTTAAAAAG......................................................24200.153300000
.............................................................................................................................T--ATCGAAGCG---AATTTTGTTATA---------AGT...........................................................................................................................................................25200.102100010
...................................................................................................................................................................TTCGCTTG------CATTTTAGCTAAATT...............................................................................................................................23200.102200000
.................................................................................................................................................................................................................................................TTTGTAGCAATCGGCCTTAAAAAGTAG...................................................27200.102200000
...........................CTATTCTTCAGTTGTAGTATTAATTC..........................................................................................................................................................................................................................................................................26200.102200000
.................................................................................................................................................................................................................CAGATTTGTAGCTAATAGCTGTT.......................................................................................23200.102200000
...............................................................................................................................................................................................................................................T-TTTGTAGCAATCGGCCTTAA..........................................................21200.102100010
.................................................................................................................................................................................................................................................................................TCTAGCTACAAAATAGCTGATTCGGC....................26200.102200000
..............................TTCTTCAGTTGTAGTATTAATTCTA........................................................................................................................................................................................................................................................................25200.051010000
............................................................................................................................................AATTTTGTTATA---------AGTTCGCT......................................................................................................................................................20200.051100000
............................TATTCTTCAGTTGTAGTATTAATTCTA........................................................................................................................................................................................................................................................................27200.051100000
................................................................................................................................................................................................TAATATTTGAAAATAGCCAGATTTGTAGC..................................................................................................29200.051100000
...............................................................................................................................................................................................................................................T-TTTGTAGCAATCGGCCTTA...........................................................20200.051000010
................................CTTCAGTTGTAGTATTAATTCTA........................................................................................................................................................................................................................................................................23200.051100000
.................................................................................................................................TCGAAGCG---AATTTTGTTATA---------AGTTCGC.......................................................................................................................................................27200.051100000
.............................................................................................................................................................................................................TAGCCAGATTTGTAGCTAATAGCTGT........................................................................................26200.051100000
..............................TTCTTCAGTTGTAGTATTAATTCTACACA....................................................................................................................................................................................................................................................................29200.051100000
.............................................................................................................................................ATTTTGTTATA---------AGTTCGCT......................................................................................................................................................19200.051100000
.............................................................................................................................................................................................................................................................GGCCTTAAAAAGTAGCCAGATCTAGC........................................26200.051100000
...........................................................................................................................................................................................................................GCTAATAGCTGTTTGAAAAT................................................................................20200.051100000
...........................................................................................................................................................................................................................................................................GCCAGATCTAGCTACAAAATAGCTGA..........................26200.051100000
..GCAT-AGCAT-ATTAGAAAGCTTACC...................................................................................................................................................................................................................................................................................................24200.051000010
..............................................................................................................................................TTTTGTTATA---------AGTTCGCTTG------C.............................................................................................................................................21200.051100000
..............................................................................................................................................TTTTGTTATA---------AGTTCGCTTG------CATT..........................................................................................................................................24200.051100000
...........................CTATTCTTCAGTTGTAGTATTAATC...........................................................................................................................................................................................................................................................................25200.051100000
...................AAGCTTACCTATTCTTCAGTTGTA....................................................................................................................................................................................................................................................................................24200.051010000
..................................................................................................................................................................................................................................................................................CTAGCTACAAAATAGCTGATTCGGCAAC.................28200.051100000
..............................................................................................................................................................................................................AGCCAGATTTGTAGCTAATAGCT..........................................................................................23200.051000001
...................................................................................................................................................TTATA---------AGTTCGCTTG------CATTTTAGC.....................................................................................................................................24200.051100000
................................................................................................................................................................................................................CCAGATTTGTAGCTAATAGCTGTTTGA....................................................................................27200.051100000
...........................CTATTCTTCAGTTGTAGTATTAA.............................................................................................................................................................................................................................................................................23200.051100000
..............TTAGAAAGCTTACCTATTCTTCAGTTG......................................................................................................................................................................................................................................................................................27200.051100000
................................................................................................................................................................................................................................................................................ATCTAGCTACAAAATAGCTGATTCGGC....................27200.051100000
.................................TTCAGTTGTAGTATTAATTCTA........................................................................................................................................................................................................................................................................22200.051100000
...............................TCTTCAGTTGTAGTATTAATTCTA........................................................................................................................................................................................................................................................................24200.051100000
.........................................................................................................................................................................................................................................................................TAGCCAGATCTAGCTACAAAATAGCTGA..........................28200.051000010
...................................................................................................................................................................TTCGCTTG------CATTTTAGCTAAATTTAATT..........................................................................................................................28200.051000010
.....................................................................................................................................................ATA---------AGTTCGCTTG------CATTTTAGCTAAAT................................................................................................................................27200.051100000
...................................................................................................................................................................TTCGCTTG------CATTTTAGCTAAATTT..............................................................................................................................24200.051100000
......................CTTACCTATTCTTCAGTTGT.....................................................................................................................................................................................................................................................................................20200.051100000
..GCAT-AGCAT-ATTAGAAAGCTTACCTA.................................................................................................................................................................................................................................................................................................26200.051000001
...........................................................................................................................................................................................................................................................................GCCAGATCTAGCTACAAAATAGCTGATA........................28200.051100000
..................................................................................................................................................................................................................................................TTGTAGCAATCGGCCTTAAAAAG......................................................23200.051100000
...........................................................................................................................................................................................................................................................................GCCAGATCTAGCTACAAAATAGC.............................23200.051100000
.................................................................................................................................................................................................................CAGATTTGTAGCTAATAGCTGT........................................................................................22200.051100000
.........................ACCTATTCTTCAGTTGTAGTATTAA.............................................................................................................................................................................................................................................................................25200.051100000
.TGCAT-AGCAT-ATTAGAAAGCTTACC...................................................................................................................................................................................................................................................................................................25200.051000010
.................................................................................................................................................................................................................................................TTTGTAGCAATCGGCCTTAAAAAGTA....................................................26200.051100000
.............................................................................................................................................................................................................................................................................CAGATCTAGCTACAAAATAGC.............................21200.051100000
.................................................................................................................................................................................................................................................TTTGTAGCAATCGGCCTTAAAAA.......................................................23200.051100000
.............................................................................................................................................................................................................TAGCCAGATTTGTAGCTAATAGCT..........................................................................................24200.051100000
...............................................................................................................................................................................................................................................T-TTTGTAGCAATCGGCCTTAAA.........................................................22200.051100000
......................................................................................................................................................................................................TTGAAAATAGCCAGATTTGTAGCT.................................................................................................24200.051100000
............................................................................................................................................................................................................................................................................CCAGATCTAGCTACAAAATAGCTG...........................24200.051100000
...............................................................................................................................................TTTGTTATA---------AGTTCGCTTG------CATTTT........................................................................................................................................25200.051100000
...................................................................................................................................................................................................................................................TGTAGCAATCGGCCTTAAAAAGTAGCC.................................................27200.051000010
...............................................................................................................................................................................................................................................T-TTTGTAGCAATCGGCCTTAAAAAAA.....................................................26200.051100000
.....................................................................................................................................................................................................TTTGAAAATAGCCAGATTTGTAGCT.................................................................................................25200.051000001
................................................................................................................................ATCGAAGCG---AATTTTGTTAT........................................................................................................................................................................20200.051100000
....................................................................................................................................................................................................................ATTTGTAGCTAATAGCTGTTTGAAAATA-..............................................................................28200.051100000
...........................................................................................................................................................................................................................................................................................AAATAGCTGATTCGGCAACACT..............22200.051000010
..................AAAGCTTACCTATTCTTCAGT........................................................................................................................................................................................................................................................................................21200.051100000
............................TATTCTTCAGTTGTAGTATTAATTCTAC.......................................................................................................................................................................................................................................................................28200.051100000
.................................TTCAGTTGTAGTATTAATTCTACA......................................................................................................................................................................................................................................................................24200.051100000
droVir3
TAAATC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAATTTTAAAAATCCAGAATTTCCGCTGTCCGCTGTTTTTAAATTATTTCCCGCAGTCAGACTTTTAAAAAAGCCAGATCAGACGGGAAAATATCTGAATTGGCAACACTGGTGACGCCGTGGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................................................................................................................................................................................................................CAGAATTTCCGCTGTCCGCTGTTTT.....................................................................................2511.001000000000000000000000000000000000000100000000000000000000000000
droWil2
TTGCAT-AAAAT-TTAAGAAGGCTTACCTTTTCTTCAGTTGGTGTATTAATTCTTTACGAAAATCGGTACATTTGATTCGAACTTGAGATTCCTCAGTTCTGTCCAGATTTAACGTTTAG---------------------------------------------CACTTT------TATTACAGCTAATTGCAATTTTTGAAAATAGCTAAATTTGTAGCTAATAGCTGTTTTAAAATT-TTTGTAGCAAACAACCTTAAAAATCATCCAAATTTAGCTACAAAGTTGCTGAT-------------------------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................................................................TACATTTGATTCGAACTTGAGATTCCT.................................................................................................................................................................................................................................2731.67503020
..............................................................................................CAGTTCTGTCCAGATTTAACGTTT.........................................................................................................................................................................................................2411.00100010
...................................................................TACATTTGATTCGAACTTGAGATTCC..................................................................................................................................................................................................................................2631.00303000
....................................................................................................TGTCCAGATTTAACGTTTAG---------------------------------------------CACTTT------..............................................................................................................................................2611.00100010
..............................................................ATCGGTACATTTGATTCGAACTTG.........................................................................................................................................................................................................................................2440.75303000
................................................................CGGTACATTTGATTCGAACTTGAGA......................................................................................................................................................................................................................................2530.67202000
........................................................................TTGATTCGAACTTGAGATTCCTCAG..............................................................................................................................................................................................................................2540.50202000
...................................................................................TTGAGATTCCTCAGTTCTGTCCAGA...................................................................................................................................................................................................................2550.40202000
....................................................................................TGAGATTCCTCAGTTCTGTCCAG....................................................................................................................................................................................................................2350.40200020
.....................................................................CATTTGATTCGAACTTGAGATTCCT.................................................................................................................................................................................................................................2530.33100010
...............................................................TCGGTACATTTGATTCGAACTTGAG.......................................................................................................................................................................................................................................2530.33100010
..............................................................ATCGGTACATTTGATTCGAACTTGAGA......................................................................................................................................................................................................................................2730.33101000
...............................................................TCGGTACATTTGATTCGAACTTG.........................................................................................................................................................................................................................................2340.25101000
............................................................AAATCGGTACATTTGATTCGAACTTG.........................................................................................................................................................................................................................................2640.25101000
...................................................................................TTGAGATTCCTCAGTTCTGTCCAG....................................................................................................................................................................................................................2450.20100010
..............................................................................................................................................................................................................................AATAGCTGTTTTAAAATT-TTTGTA........................................................................2450.20101000
...................................................................................TTGAGATTCCTCAGTTCTGTCCA.....................................................................................................................................................................................................................2350.20100010
....................................................................................TGAGATTCCTCAGTTCTGTCCA.....................................................................................................................................................................................................................2250.20101000
..................................................................................CTTGAGATTCCTCAGTTCTGTCCAGA...................................................................................................................................................................................................................2650.20101000
dp5
TTACAATC-AAA------------------------------------------------------------------------------------------------------------TC---AGAATCAAAAAT---GGTTTTGTTCTAA---------ATTTTTTTAAGTTAA--AATAAGCTAAAAG--AAATTTGAAATAAGCTAGATATCTCGCTGTAAGCAATGCAAATACT-TTTCAAGCTATTCGATTTAAAAATAAACAAAATCTAGCTTAAAAAAAGCTAAAATGGCAACAATGC------------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................................................................................................................................................................AAGCTAGATATCTCGCTGTAAGC...........................................................................................2373.572502030000200
.............................................................................................................................................................................................................AAGCTAGATATCTCGCTGTAAG............................................................................................2271.86130610000510
.................................................................................................................................................................................................................................................TTTCAAGCTATTCGATTTAAAAA.......................................................2371.861301200000010
.....................................................................................................................................................................................................TTTGAAATAAGCTAGATATCTCG...................................................................................................2371.711201000000020
.................................................................................................................................................................................................................................................TTTCAAGCTATTCGATTTAAAAAT......................................................2471.57110600001130
.................................................................................................................................................................................................................................................TTTCAAGCTATTCGATTTAAAAATA.....................................................2571.57110800001020
.............................................................................................................................................................................................................AAGCTAGATATCTCGCTGTAAGCAA.........................................................................................2571.1480000000800
.................................................................................................................................................................................................................................................TTTCAAGCTATTCGATTTAAAAATAA....................................................2670.8660200000040
..............................................................................................................................................................................................................AGCTAGATATCTCGCTGTAAG............................................................................................2170.7150300000200
..........................................................................................................................................................................................TAAAAG--AAATTTGAAATAAGCTAGA..........................................................................................................2570.7150000000140
.............................................................................................................................................................................................................AAGCTAGATATCTCGCTGTAAGCA..........................................................................................2470.7150200000300
.....................................................................................................................................................................................................TTTGAAATAAGCTAGATATCTCGC..................................................................................................2470.5740400000000
...............................................................................................................................................................................................................GCTAGATATCTCGCTGTAAGCAATGC......................................................................................2670.5740200000110
.................................................................................................................................................................................................................TAGATATCTCGCTGTAAGCAATGC......................................................................................2470.5740000000310
...................................................................................................................................................................................................................GATATCTCGCTGTAAGCAATG.......................................................................................2170.5740200000200
................................................................................................................................................................................A--AATAAGCTAAAAG--AAATTTGAAA...................................................................................................................2480.5040100000030
...........................................................................................................................................................................................AAAAG--AAATTTGAAATAAGCTAGATA........................................................................................................2670.4330000000030
.............................................................................................................................................................................................AAG--AAATTTGAAATAAGCTAG...........................................................................................................2170.4330100000200
.................................................................................................................................................................................................................................................TTTCAAGCTATTCGATTTAAAAAA......................................................2470.4330300000000
..........................................................................................................................................................................................TAAAAG--AAATTTGAAATAAGCTAGATA........................................................................................................2770.4330200000100
.....................................................................................................................................................................................................................TATCTCGCTGTAAGCAATGCAAATACT-A.............................................................................2870.4330000000300
.................................................................................................................................................................................................................TAGATATCTCGCTGTAAGCAATGCAAA...................................................................................2770.4330000000030
..........................................................................................................................................................................................................................................................ATTCGATTTAAAAATAAACAAAATA............................................2580.3830000000030
.......................................................................................................................................................................................................................TCTCGCTGTAAGCAATGCAAA...................................................................................2180.3830000000300
....................................................................................................................................................................................................................ATATCTCGCTGTAAGCAATG.......................................................................................2080.3830200000100
.....................................................................................................................................................................................................................TATCTCGCTGTAAGCAATGCAAATA.................................................................................2580.3830000000030
.......................................................................................................................................................................................................TGAAATAAGCTAGATATCTCG...................................................................................................2170.2920200000000
....................................................................................................................................................................................................ATTTGAAATAAGCTAGATATC......................................................................................................2170.2920000000020
..............................................................................................................................................................................................................AGCTAGATATCTCGCTGTAAGC...........................................................................................2270.2920200000000
.................................................................................................................................................................................................................................................TTTCAAGCTATTCGATTTAAAA........................................................2270.2920200000000
............................................................................................................................................................................................................TAAGCTAGATATCTCGCTGTAAGCAA.........................................................................................2670.2920000000020
.........................................................................................................................................................................................................AAATAAGCTAGATATCTCGCTGT...............................................................................................2370.2920200000000
.................................................................................................................................................................................................................................................TTTCAAGCTATTCGATTTAAAAATAAAC..................................................2870.2920200000000
.........................................................................................................................................................................................................AAATAAGCTAGATATCTCGCT.................................................................................................2170.2920200000000
.............................................................................................................................................................................................................AAGCTAGATATCTCGCTGTAAGA...........................................................................................2370.2920100000100
.......................................................................................................................................................................................................TGAAATAAGCTAGATATCTCGCTG................................................................................................2470.2920200000000
..................................................................................................................................................................................................................................................TTCAAGCTATTCGATTTAAA.........................................................2070.2920200000000
.......................................................................................................................................................................................................................TCTCGCTGTAAGCAATGCAAATAC................................................................................2470.2920100000010
..........................................................................................................................................................................................................................CGCTGTAAGCAATGCAAATACT-..............................................................................2270.2920000000200
............................................................................................................................................................................................................TAAGCTAGATATCTCGCTGTAAGC...........................................................................................2470.2920200000000
.................................................................................................................................................................................................................................................TTTCAAGCTATTCGATTTAAAAATAAA...................................................2770.2920200000000
................................................................................................................................................................................................................CTAGATATCTCGCTGTAAGCA..........................................................................................2170.2920100000010
.........................................................................................................................................................................................................AAATAAGCTAGATATCTCGCTGTA..............................................................................................2470.2920000000020
............................................................................................................................................................................................................TAAGCTAGATATCTCGCTGTAAGCA..........................................................................................2570.2920200000000
.....................................................................................................................................................................................TAAGCTAAAAG--AAATTTGAAA...................................................................................................................2180.2520000000020
.....................................................................................................................................................................................TAAGCTAAAAG--AAATTTGAAATAA................................................................................................................2480.2520000000200
.........................................................................................................................................................................................................................TCGCTGTAAGCAATGCAAAT..................................................................................2080.2520200000000
...................................................................................................................................................................................AATAAGCTAAAAG--AAATTTGAAAT..................................................................................................................2480.2520100000010
.......................................................................................................................................................................................................................TCTCGCTGTAAGCAATGCAAATA.................................................................................2380.2520000000200
...............................................................................................................................................................................................................GCTAGATATCTCGCTGTAAGC...........................................................................................2170.1410000000100
.................................................................................................................................................................................................................TAGATATCTCGCTGTAAGCAATG.......................................................................................2370.1410100000000
..................................................................................................................................................................................................................................................TTCAAGCTATTCGATTTAAAAATA.....................................................2470.1410100000000
.......................................................................................................................................................................................................................TCTCGCTGTAAGCAATGCAAATACT-TTT...........................................................................2870.1410000000010
......................................................................................................................................................................................................TTGAAATAAGCTAGATATCTCG...................................................................................................2270.1410100000000
...............................................................................................................................................................................................................GCTAGATATCTCGCTGTAAGCAATGCA.....................................................................................2770.1410100000000
...........................................................................................................................................................................................................ATAAGCTAGATATCTCGCTGTAAGC...........................................................................................2570.1410100000000
............................................................................................................................................................................................AAAG--AAATTTGAAATAAGCTAGATA........................................................................................................2570.1410000000010
.............................................................................................................................................................................................................AAGCTAGATATCTCGCTGTAAGCAATG.......................................................................................2770.1410100000000
..........................................................................................................................................................................................TAAAAG--AAATTTGAAATAAGCTAG...........................................................................................................2470.1410000000100
..........................................................................................................................................................................................................................CGCTGTAAGCAATGCAAATACT-TTT...........................................................................2570.1410100000000
.........................................................................................................................................................................................................................TCGCTGTAAGCAATGCAAATACT-..............................................................................2370.1410000000010
.....................................................................................................................................................................................................TTTGAAATAAGCTAGATATCTC....................................................................................................2270.1410100000000
...............................................................................................................................................................................................................GCTAGATATCTCGCTGTAAGCAAT........................................................................................2470.1410100000000
.....................................................................................................................................................................................................TTTGAAATAAGCTAGATATCTCGCT.................................................................................................2570.1410100000000
..................................................................................................................................................................................................................................................TTCAAGCTATTCGATTTAAAAA.......................................................2270.1410100000000
........................................................................................................................................................................................................................CTCGCTGTAAGCAATGCAAATAC................................................................................2370.1410100000000
.................................................................................................................................................................................................................................................TTTCAAGCTATTCGATTTA...........................................................1970.1410100000000
....................................................................................................................................................................................................ATTTGAAATAAGCTAGATATCTC....................................................................................................2370.1410100000000
..................................................................................................................................................................................................................................................TTCAAGCTATTCGATTTAAAA........................................................2170.1410000000010
.....................................................................................................................................................................................................................................................AAGCTATTCGATTTAAAAATAA....................................................2270.1410100000000
.....................................................................................................................................................................................................................................ATGCAAATACT-TTTCAAGCTAT...................................................................2270.1410010000000
.....................................................................................................................................................................................TAAGCTAAAAG--AAATTTGAAATAAGC..............................................................................................................2670.1410000000010
....................................................................................................................................................................................................ATTTGAAATAAGCTAGATATCT.....................................................................................................2270.1410100000000
...............................................................................................................................................................................................................GCTAGATATCTCGCTGTAAGCA..........................................................................................2270.1410100000000
.............................................................................................................................................................................................................AAGCTAGATATCTCGCTGTAAGCAAT........................................................................................2670.1410100000000
.....................................................................................................................................................................................................................................................AAGCTATTCGATTTAAAAAT......................................................2070.1410100000000
............................................................................................................................................................................................................TAAGCTAGATATCTCGCTGTAAG............................................................................................2370.1410000000100
............................................................................................................................................................................................................TAAGCTAGATATCTCGCTGTAAGCAATG.......................................................................................2870.1410100000000
............................................................................................................................................................................................................TAAGCTAGATATCTCGCTGTAAGCAAT........................................................................................2770.1410100000000
.......................................................................................................................................................................................................................TCTCGCTGTAAGCAATGCAAATACT-..............................................................................2570.1411000000000
..................................................................................................................................................................................................................AGATATCTCGCTGTAAGCAATG.......................................................................................2270.1410000000100
...................................................................................................................................................................................................................................................TCAAGCTATTCGATTTAAAAATAAA...................................................2570.1410000000100
......................................................................................................................................................................................................................ATCTCGCTGTAAGCAATGCAAATACC-..............................................................................2670.1410000000010
..................................................................................................................................................................................................................................................TTCAAGCTATTCGATTTAAAAATAA....................................................2570.1410000000100
...........................................................................................................................................................................................................ATAAGCTAGATATCTCGCTGTAAG............................................................................................2470.1410000000100
......................................................................................................................................................................................................................................................AGCTATTCGATTTAAAAATAAACA.................................................2470.1410000000010
...................................................................................................................................................................................AATAAGCTAAAAG--AAATTTGAAATAAGC..............................................................................................................2870.1410010000000
....................................................................................................................................................................................................ATTTGAAATAAGCTAGATATCTCG...................................................................................................2470.1410100000000
...............................................................................................................................................................................................................GCTAGATATCTCGCTGTAAG............................................................................................2070.1410000000010
......................................................................................................................................................................................................TTGAAATAAGCTAGATATCTCGCTG................................................................................................2570.1410100000000
...............................................................................................................................................................................................................................................T-TTTCAAGCTATTCGATTTAAAAAT......................................................2570.1410100000000
.....................................................................................................................................................................................................TTTGAAATAAGCTAGATATCTCGA..................................................................................................2470.1410010000000
................................................................................................................................................................................................................CTAGATATCTCGCTGTAAGC...........................................................................................2070.1410000100000
.....................................................................................................................................................................................................................TATCTCGCTGTAAGCAATGCAAATACT-..............................................................................2770.1410100000000
.................................................................................................................................................................................................................................................TTTCAAGCTATTCGATTTAAA.........................................................2170.1410100000000
.............................................................................................................................................................................................................AAGCTAGATATCTCGCTGTAAGT...........................................................................................2370.1410000000100
........................................................................................................................................................................................................................CTCGCTGTAAGCAATGCAAATACT-TTT...........................................................................2770.1410100000000
..............................................................................................................................................................................................................AGCTAGATATCTCGCTGTAAGCAATG.......................................................................................2670.1410100000000
...............................................................................................................................................................................................................................................T-TTTCAAGCTATTCGATTTAAAAA.......................................................2470.1410000000010
.........................................................................................................................................................................................................................................................TATTCGATTTAAAAATAAACAAAAA.............................................2580.1310000000010
...........................................................................................................................................................................AGTTAA--AATAAGCTAAAAG--AAA..........................................................................................................................2280.1310000000100
...................................................................................................................................................................................................................................................................................TAGCTTAAAAAAAGCTAAAATGGCAA..................2680.1310100000000
.....................................................................................................................................................................................................................TATCTCGCTGTAAGCAATGCAA....................................................................................2280.1310100000000
.....................................................................................................................................................................................................................TATCTCGCTGTAAGCAATGCAAA...................................................................................2380.1310000000100
.....................................................................................................................................................................................TAAGCTAAAAG--AAATTTGAAATA.................................................................................................................2380.1310000000100
................................................................................................................................................................................................................................................................................ATCTAGCTTAAAAAAAGCTAAAATGG.....................2680.1310000000010
.....................................................................................................................................................................................TAAGCTAAAAG--AAATTTGAA....................................................................................................................2080.1310100000000
........................................................................................................................................................................................................................................................................TAAACAAAATCTAGCTTAAAAAAAGC.............................2680.1310010000000
....................................................................................................................................................................................................................ATATCTCGCTGTAAGCAATGC......................................................................................2180.1310100000000
.............................................................................................................................................................................................................................TGTAAGCAATGCAAATACA-..............................................................................1980.1310000000100
......................................................................................................................................................................................................................ATCTCGCTGTAAGCAATGCAA....................................................................................2180.1310100000000
...................................................................................................................................................................................AATAAGCTAAAAG--AAATTTGAAA...................................................................................................................2380.1310100000000
....................................................................................................................................................................................................ATTTGAAATAAGCTAGAT.........................................................................................................18130.0810000000010
droPer2
TACTATTT-ACATATAT--ACTTATATATATT--------------------------------------------------------------ATAT------------------TTATTA---T--A---ATATG---AATTTT-TTAAA---------ATTTTTTTTT------TATTT----------------TAATAAATATTTTTAATTCTAG----TAAC--------CATT-TTTCTGGCAATAGAACTTTAAAAATAGCCAGAGCTAGCTATAAAGCAGCTGAATTGGCAGCACTG-------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droAna3
TA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTGAAGT--TTATTTTAAAATAGCTAGATTTATAGCTAGTAGCAATTTCTTAATT-TTTCTAGCATTCGGCCTTTCAAAATGGCTAGAACTAGCCATAAAATTGCTAAACTGGCAACACTGTC-----------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................................................................................................................................................................................................................TCTAGCATTCGGCCTTTCAAAATGGC..................................................26515.80793678001
..................................................................................................................................................................................................................................................TTCTAGCATTCGGCCTTTCAAAATGGC..................................................2756.00300272001
......................................................................................................................................................................................................................................TTTCTTAATT-TTTCTAGCATTCGGCC..............................................................2652.60130130000
.................................................................................................................................................................................................................................................TTTCTAGCATTCGGCCTTTCAAAATGGC..................................................2851.407070000
..................................................................................................................................................................................................................................................TTCTAGCATTCGGCCTTTCAAAATGG...................................................2650.804202000
.....................................................................................................................................................................................................................................................TAGCATTCGGCCTTTCAAAATGGC..................................................2450.804040000
...................................................................................................................................................................................................................................................TCTAGCATTCGGCCTTTCAAAATGGCTA................................................2850.804130000
..............................................................................................................................................................................................................................................TT-TTTCTAGCATTCGGCCTTTCAAAA......................................................2650.804040000
...................................................................................................................................................................................................................................................................................TAGCCATAAAATTGCTAAACTGGCAAC.................2750.603120000
...............................................................................................................................................................................................................................................T-TTTCTAGCATTCGGCCTTTCAAAA......................................................2550.603030000
...................................................................................................................................................................................................................................................TCTAGCATTCGGCCTTTCAAAATGG...................................................2550.603120000
......................................................................................................................................................................................................................................TTTCTTAATT-TTTCTAGCATTCGGCCT.............................................................2750.603030000
....................................................................................................................................................................................................................................AATTTCTTAATT-TTTCTAGCATTCGGCC..............................................................2850.603030000
...........................................................................................................................................................................................................................................TAATT-TTTCTAGCATTCGGCCTTTC..........................................................2550.402110000
...........................................................................................................................................................................................................................................TAATT-TTTCTAGCATTCGGCCTTTCA.........................................................2650.402110000
...................................................................................................................................................................................................................................................TCTAGCATTCGGCCTTTCAAAAT.....................................................2350.402110000
........................................................................................................................................................................................................................................TCTTAATT-TTTCTAGCATTCGGCCTT............................................................2650.402020000
.................................................................................................................................................................................................................................................TTTCTAGCATTCGGCCTTTCAAAATGG...................................................2750.402011000
...........................................................................................................................................................................................................................................................TCGGCCTTTCAAAATGGCTAGAACTAGC........................................2850.402110000
...................................................................................................................................................................................................................................................................................TAGCCATAAAATTGCTAAACTGGC....................2460.332110000
.................................................................................................................................................................................................................................................................TTTCAAAATGGCTAGAACTAGCCATA....................................2660.332110000
...........................................................................................................................................................................................................................................TAATT-TTTCTAGCATTCGGCCTT............................................................2350.201010000
.....................................................................................................................................................................................................................................................TAGCATTCGGCCTTTCAAAATGG...................................................2350.201001000
......................................................................................................................................................................................................................................TTTCTTAATT-TTTCTAGCATTCGGCCTT............................................................2850.201010000
........................................................................................................................................................................................................................................................CATTCGGCCTTTCAAAATGGC..................................................2150.201010000
.......................................................................................................................................................................................................................................TTCTTAATT-TTTCTAGCATTCGGCCTT............................................................2750.201010000
..........................................................................................................................................................................................................................................................TTCGGCCTTTCAAAATGGCTAGAACT...........................................2650.201010000
..............................................................................................................................................................................................................................................................GCCTTTCAAAATGGCTAGAACTAGCC.......................................2650.201100000
.........................................................................................................................................................................................................................................................ATTCGGCCTTTCAAAATGGCTA................................................2250.201100000
...................................................................................................................................................................................................................................................TCTAGCATTCGGCCTTTCAAAATGGCT.................................................2750.201100000
..................................................................................................................................................................................................................................................TTCTAGCATTCGGCCTTTCAAAATG....................................................2550.201100000
...................................................................................................................................................................................................................................CAATTTCTTAATT-TTTCTAGCATTCGGCC..............................................................2950.201010000
...............................................................................................................................................................................................................................................T-TTTCTAGCATTCGGCCTTTCAAAATGGC..................................................2950.201100000
....................................................................................................................................................................................................................................................CTAGCATTCGGCCTTTCAAAATGGC..................................................2550.201100000
............................................................................................................................................................................................................................................AATT-TTTCTAGCATTCGGCCTT............................................................2250.201100000
...............................................................................................................................................................................................................................................................CCTTTCAAAATGGCTAGAACTAGCC.......................................2550.201010000
.................................................................................................................................................................................................................................................TTTCTAGCATTCGGCCTTTCAAAATG....................................................2650.201100000
...............................................................................................................................................................................................................................................T-TTTCTAGCATTCGGCCTTTCAAAAT.....................................................2650.201100000
..............................................................................................................................................................................................................................................TT-TTTCTAGCATTCGGCCTTTCAAA.......................................................2550.201010000
.....................................................................................................................................................................................................................................ATTTCTTAATT-TTTCTAGCATTCGGCC..............................................................2750.201010000
...............................................................................................................................................................................................................................................T-TTTCTAGCATTCGGCCTTTCAAA.......................................................2450.201100000
..........................................................................................................................................................................................................................................TTAATT-TTTCTAGCATTCGGCCT.............................................................2360.171010000
........................................................................................................................................................................................................................................TCTTAATT-TTTCTAGCATTCGGCCC.............................................................2560.171010000
.....................................................................................................................................................................................................................TTTATAGCTAGTAGCAATTTCTTAAT................................................................................2660.171100000
.................................................................................................................................................................................................................................................................TTTCAAAATGGCTAGAACTAGCCAT.....................................2560.171010000
........................................................................................................................................................................................................................................TCTTAATT-TTTCTAGCATTCGGCCT.............................................................2560.171010000
...............................................................................................................................................................................................................................................................................GAACTAGCCATAAAATTGCTAAACTGGC....................2860.171010000
.................................................................................................................................................................................................................................................................TTTCAAAATGGCTAGAACTAGC........................................2260.171100000
.......................................................................................................................................................................................................................TATAGCTAGTAGCAATTTCTTAAT................................................................................2460.171010000
................................................................................................................................................................................................................................................................................AACTAGCCATAAAATTGCTAAACTGGC....................2760.171010000
.......................................................................................................................................................................................................................TATAGCTAGTAGCAATTTCTTAATT-TT............................................................................2760.171010000
.............................................................................................................................................................................................................................................................................TAGAACTAGCCATAAAATTGCTAAAC........................2670.141010000
droBip1
TTCTTT-GGTAT-ATCG--ATGGTTATTTATTATTCAATTGGAAAAATACTACAAAATA-----------------TAAAAGTTTGGCATCCCAAAGT------------------TTAAAAATAC--ATGAAGGTG---TCAGATGCCATT---------AAATAGCT------AAA-ATCACGCCAATTT--TTCTTAGAAAATAGCTATAATTCCCGCTAACCGCTAGTTTGAAATT-TATCCAGCATTTTGCTTTTGAAAACCGCCAGATCTAGTGGGGAAATAGCTAAATTGGCAACACTGCC-----------SizeHit CountTotal NormTotal
No Reads
droKik1
TTTTCTTT-AAA------------------------------------------------------------------------------------------------------------AG---A--GT------------CTTGATGATTTTGTTCGGAAAGTCGTTAT------C-----ATTTGAATA--A----AATAAAAAGCCAGAATTCCCGCTGCCCGCTGTTTGTAAATT-TTTCTAGCAAATGGCATTCAGAAAAAGCCAGATTTTACGGGAAAAAAGCGACTCTGGCAACAGTG-------------SizeHit CountTotal NormTotal
No Reads
droFic1
TACAAT-CAAAA--------------------------------------------------------------------------------------------------------------------AACAAAACA---TATTTTGTTATAA---------ATTTTTTTAAGCCGA--AATTAGCTAAATG--AAATTTGAAATAAGCCAGATTTTAAGCTATATGCATTTCAAGTATT-TTTCAAGCTATTTCATTTTAAAATATGCTAAATCTAGCTTGAAATAAGCTAAAATGGCAACAATGATGGA----CAGCSizeHit CountTotal NormTotal
No Reads
droEle1
ATCGAA-AAAAA-AT-------------------------------------------------------------------------------------------------------------------------------TTTTGTTATAA---------ATTTATTTAAGCCGA--AATAAGCTAAATG--AAATTTGAAATAAGCCAGATTTTAAGCTATATGTATTTCAAGTATT-TTTCAAGCTATTTCATTTTAAAATATGCTAAATCTAGCTTGAAATAAGCTAAAATGGCAACAATGCTG---------CSizeHit CountTotal NormTotal
No Reads
droRho1
AAAATA---------------------------------------------------------------------------------------------------------------------------ACAAAATGTTTATTTTTGTAATA---------AAGTTGCT------AAA---ATTGCAAAAAA--AATATGAAAAGTTGCTAGATTTGTTGCTAATAGCAAATCGAAAAAA-AAT--TGTAAA-TTTTTTTAAAAGTTGCTAGATCTAGCAACTAAATAGCTAAACTGGCAGCCCTGCTGG---------SizeHit CountTotal NormTotal
No Reads
droBia1
CTAAAT--------------------------------------------------------------------------------------------------------------------------------------------------------------TA----------------------------TTTTTAAAAATGGGCTAGATTTATGGCTATAGGCTATCTACAAATT-TTATAAGCTAGATCATTTAAAAACAGGCTAGATCTAGCCTGAAATAGGCTAAACTGGCAACACTGCCG----------SizeHit CountTotal NormTotal
No Reads

Generated: 05/18/2015 at 01:14 AM