dmo_1741

Name	Class	Family	Strand
OSVALDO_I-int	LTR	Gypsy	+

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- GATGCGCGAAGTGTTCGCCGCGGCAGTGGAAGCCGGCCTTATGGGACAAGGTAAGTGTGGGCAAAAGAACGCCACTTGTCCAATGCCGCAGAGGGATTCGCTGTAAAACCAACGCGTTATGGAGGCCCATATACAGTTTTGTCTCCAGTCATCTGCCGGATCAAGTTAGAGGCGAGGACGGCGCATGTGGCGGATCTCAAGCCGTGGAGCAATGGAGCTGTTTCATTTTTTTTTTTAAATAAAAGGGAGTG ************************************************...............(((.((((((.((((((((.((.....)).)))(((.((.......)))))...(((((((..............)))))))(((.((.(((.............))))).))))).))).))))))..)))....************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M046 female body	V049 head
.........................................................................ACTTCTCCCATGCCGCCGAG..............................................................................................................................................................	20	3	8	0.13	1	1	0
.......................................................................................................................................................................................CATGTGGCGGATCTCAAGCCG...............................................	21	0	20	0.05	1	0	1

CTACGCGCTTCACAAGCGGCGCCGTCACCTTCGGCCGGAATACCCTGTTCCATTCACACCCGTTTTCTTGCGGTGAACAGGTTACGGCGTCTCCCTAAGCGACATTTTGGTTGCGCAATACCTCCGGGTATATGTCAAAACAGAGGTCAGTAGACGGCCTAGTTCAATCTCCGCTCCTGCCGCGTACACCGCCTAGAGTTCGGCACCTCGTTACCTCGACAAAGTAAAAAAAAAAATTTATTTTCCCTCAC ************************************************...............(((.((((((.((((((((.((.....)).)))(((.((.......)))))...(((((((..............)))))))(((.((.(((.............))))).))))).))).))))))..)))....************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M046 female body	M060 embryo	V041 embryo	V110 male body
......................................................................CGGTGAACAGGTTACGGCGTCTCCCT...........................................................................................................................................................	26	0	2	4.00	8	4	4	0	0
.......................................................................GGTGAACAGGTTACGGCGTCTCCCT...........................................................................................................................................................	25	0	2	4.00	8	5	1	2	0
.....................................................................GCGGTGAACAGGTTACGGCGTCTCCCT...........................................................................................................................................................	27	0	2	3.50	7	7	0	0	0
..............................................................................................................................................................................TCCTGCCGCGTACACCGCCTAGAGT....................................................	25	0	20	1.70	34	34	0	0	0
...............................................................................................................................................................................CCTGCCGCGTACACCGCCTAGAGTT...................................................	25	0	20	1.15	23	23	0	0	0
.............................................................................................................................................................................CTCCTGCCGCGTACACCGCCTAGAGT....................................................	26	0	1	1.00	1	0	1	0	0
........................................................................GTGAACAGGTTACGGCGTCTCCCTAA.........................................................................................................................................................	26	0	2	0.50	1	1	0	0	0
......................................................................CGGTGAACAGGTTACGGCGTCTCCC............................................................................................................................................................	25	0	2	0.50	1	1	0	0	0
..........................................................................GAACAGGTTACGGCGTCTCCCTAAG........................................................................................................................................................	25	0	2	0.50	1	1	0	0	0
.............................................................................CAGGTTACGGCGTCTCCCTAAGCGG.....................................................................................................................................................	25	1	2	0.50	1	0	1	0	0
.......................................................................GGAGAACAGGTTACGGCGTCTCCCT...........................................................................................................................................................	25	1	2	0.50	1	1	0	0	0
.....................................................................GCGGTGAACAGGTTACGGCGTCTCCC............................................................................................................................................................	26	0	2	0.50	1	1	0	0	0
............................................................................ACAGGTTACGGCGTCTCCCTAAGC.......................................................................................................................................................	24	0	2	0.50	1	0	1	0	0
.............................................................................................................................................................................CTCCTGCCTCGTACACCGTCGA........................................................	22	3	2	0.50	1	0	1	0	0
...................................................................TTGCGGTGAACAGGTTACGGCGTCTCCCT...........................................................................................................................................................	29	0	2	0.50	1	1	0	0	0
............................................................................ACAGGTTACGGCGTCTCCCTAAGCG......................................................................................................................................................	25	0	2	0.50	1	1	0	0	0
.............................................................................CAGGTTACGGCGTCTCCCTAAG........................................................................................................................................................	22	0	2	0.50	1	0	1	0	0
.............................................................................CAGGTTACGGCGTCTCCCTAAGCG......................................................................................................................................................	24	0	2	0.50	1	1	0	0	0
..............................................................................................................................................................................CCCTGCCGCGTACACCGCCTAGAGT....................................................	25	1	20	0.35	7	0	7	0	0
..............................................................................................................................................................................TCCTGCCGCGTACACCGCCTAGATT....................................................	25	1	20	0.35	7	0	7	0	0
...............................................................................................................................................................................CCTGCCGCGTACACCGCCTAGAG.....................................................	23	0	20	0.30	6	6	0	0	0
...............................................................................................................................................................................CCTGCCGCGTACACCGCCTAGAGT....................................................	24	0	20	0.30	6	0	0	6	0
.....CCCTTCATAAGTGGCGCCGT..................................................................................................................................................................................................................................	20	3	5	0.20	1	1	0	0	0
...........................................................................................................................................................................CGGTCCTGCCGCGTACACCGCCTAGAGT....................................................	28	1	20	0.20	4	0	4	0	0
..............................................................................................................................................................................TCCTGCCGCGTACACCGCCTAGAG.....................................................	24	0	20	0.10	2	2	0	0	0
.................................................................................................................................................................................TGCCGCGTACACCGCCTAGAGT....................................................	22	0	20	0.10	2	0	0	0	2
...............................................................................................................................................................................CCTGCCGCGTACACCCACTAGATT....................................................	24	3	20	0.05	1	0	1	0	0
..............................................................................................................................................................................TCCTGCCGCGTACACCGCCTATATT....................................................	25	2	20	0.05	1	0	1	0	0
................................................................................................................................................................................CTGCCGCGTACGCCGCCTAGAGTGC..................................................	25	2	20	0.05	1	1	0	0	0
...................................................................................................................................................................................CCGCGTACACCGCCTAGAGGT...................................................	21	1	20	0.05	1	0	1	0	0
...............................................................................................................................................................................CCTGCCGCGTACACCGCCTAGCGT....................................................	24	1	20	0.05	1	0	1	0	0
...............................................................................................................................................................................CCTTCCGCGTACACCGCCTAGAGT....................................................	24	1	20	0.05	1	0	1	0	0
................................................................................................................................................................................CTGCCGCGTACACCGCCTAGAGGT...................................................	24	1	20	0.05	1	0	1	0	0

Species	Coordinate	ID	Alignment
droMoj3	scaffold_6540:530755-531005 +	dmo_1741	GATGCGCGAAGTGTTCG-------------------------------------------------------------CC-GCGGCAGTGGAAGCCGGCCTTATGGGACAAGGTAAGTGTGGGCAAAAGAACGCCACTTGTCCAATGCCGCAGAGGGATTCGCTGTAAAACCAACG---CGTTATGGAGGCCCATATACAGT---------TTTGTCTCCAGTCATCTGCCGGATCAAGT------------TAGAGGCGAGGACGGCGCATGTGGCGGATCTCAAGCCGTGGAGC-------AATGGAGCTG-------------TTTCATTTTTTTTTTTAAATAAAAGGGAGTG
droVir3	scaffold_12954:1068985-1069060 -		A---------------------------------------------------------------------------------------------------------------------------------GCACCAGTTGTCCAACGCTGCCGAAGGTTTCGCCGCAAAGTTGGCACCCAAATTTGACAGCCCCTACAAAGTCTT--------------------------------------------------------------------------------------------------------------------------------------------------------
droGri2	scaffold_15120:39941-40169 -		CACAA-----------------------------------------------------------------GGCCTGCGTCGTAGTCCGTGGAAACCCAATATCGGAGACAG----AGTGTGGGTGAAATTACACCACCTGTCGAATGCAGCAGTAGGATTCGCGGCGAAGCTATCACCGAGATATGGGGGCCCTTACCAGATTGTAGATTTCACATCACCCGTAATATGCAAGATAAAGGGCATAACGGACAGGCGGATAAGGACAGCACACGTGAGCCACCTGAAGCCGCACAGC-------GA----------------------------------------------------
droWil2	scf2_1100000004941:187860-188044 -		A-------------------------------------------------------------------------------------------------------------------GTATGGGCAAAAGAACACCATCTTTCAAATGCTGCAGAAGGATTTGCAGCGAAGCTGGCTCCAAGGTTTGGAGGCCCATATGAAGTAATCGGTTTCGTGTCTCCGGTCGTATGTAAATTACGGCACAAGGAAACGGGGAAAAACCGCCAAGCACATATCAGCCAGATGAAGCAAAAAATA---------------------------------------------------------TGTG
dp5	Unknown_group_102:15904-16153 +		G---------------------------------------------------GATCAGGCCAGGCACTACAACCTGAGAAGAAGACCATGGAGACCCAAAGTGGGAGAGGT----CGTATGGGCCAAACAGCACCACCTTTCCAATGCAGCTGAGGGATTTGCCGCAAAGCTGGCACCAAGGTACGATGGGCCATACCGGATAGAGGACTTTATATCCCCAGTTATCTGCCACCTAAGAAAGGAGGGCGACAGGAAGAAGAGAACGGCACACATACGAGATCTGTAACCCCAACCCGAGGAGCGA----------------------------------------------------
droPer2	scaffold_2:133414-133661 -		G---------------------------------------------------GATCAGGCCAGGCATTACAACCTGAGAAGAAGACCATGGAGACCCAAAGTGGGAGAGGT----CGTATGGGCCAAACAGCACCACCTTTCCAATGCAGCGGAGGGATTTGC--CAAAGCTGGCACCAAGGTACGATGGGCCATACCGGATAGAGGACTTTATATCCCCAGTTATCTGCCACCTAAGAAAGGAGGGCGACAGGAAGAAGAGAACGGCACACATACGAGATCTGTAACCCCAACCCGAGGAGCGA----------------------------------------------------
droAna3	scaffold_13021:8055-8323 +		ATTACAGGAAGTGTTCGAGCTGGA---------------------------------------------------------------GAGTTGCCCGAAGATTGGCGACTC----AGTGTGGGCAAAGGAGCACCATTTGTCCAAAGCGGCCGAAGGTTGCGCGGCGAAGTTAGCGCCAAAGTACGACGGGCCGTACACAGTGGTGAACTTTGTGTCACCAGTGATTGCTGTGCTACGTCACGCTGGCACAAGGAAGGAAAAGAAGGCCCACCTGAGTGAGCTAAAAGCCCAAG-C-------ACAGGAGTCG-------------GTGCAGGCATAAACCTAAACTAAACAAAACA
droBip1	scf7180000395243:194-438 -		G---------------------------------------------------GACCAGGCGAGGCATTACAATTTACGGAGACGGAAGTGGAGCCCAAAGGTTGGCGAAAC----AGTGTGGGCAAAAGAGCACCATTTGTCGAAGGCGGCAGAGGGATTCGCTGCAAAACTAGCGCCGCGGTACGATGGGCCCTATACGGTCGTCAATTTCGTTTCGCCGGTAATTGTCATCATACGGCACGGAAGAACCAACAAAGAGAAGAGGGCACACATGAGGGAGCTGAAGTGCCGAGAA---------------------------------------------------------ATGG
droKik1	scf7180000298039:6493-6719 +		CA------------------------------------------------------------------------TGCGTCGCCGTACCTGGAAGCCGGCCATGGGATCACT----CGTCTTGGTGCGACAACATCACCTCTCAAAAGCAGCAGAGGGATTCGCAGTGAAGCTTGCCCCAAAATTCGACGGGCCCTACAAAGTGGTCGCTTTTCCTTCGCCCAACGTCGTCCGAATCCGCCTGCCAGGCCAGCGGAAGGGACGACTTGCCAATATTGGAGACTTAAAAGCGTTTCAT-------TC-----------------------------TTCTT------------------
droFic1	scf7180000454031:28173-28457 -		ATTAAGTGAAATCTTCGAGGTCGTCAGGCGGAATATGGAAAAGGCAGTGTAGGATCAGGCACGCCATAACAACCTGCGAAGGAGGCCATGGACCCCGAAGATTGGCGATAA----AGTCTGTACAAAGGAACACCACCTGTCCAGAGCGGTGGATGGCTTCGCTGCAAAATTGGCCTCCAGATATGACGGGCCATACACCATCACGAAATTTATTTCCCCGGTCGTTTGCAACTTGAGGCACAGCCTGAGTGGC-AAGGAAAACCGAATCATATTATTGAGCTAAAGCCG-------------------------------------------------------------------
droEle1	scf7180000487397:1183-1447 +		AATAAACGAAATCTTCGAGCTGGTC-------------AGAAGGCGGCGCAGGATCAGGCGCGCCACTACAATCTCCGGAGGCGCCCTTGAAAACCACAGATCGGAGACAC----GGTATGGGCCAAGGAGCACCATCTATCCAACGCGGCAGAAGGATTCGCGGCGAAACCGGCCCCCAGATACGAGAGACCGTTTAAAATAATTAATTTCGATTCTCCGGC-------------------------------AAAGAAAGGAAAACACACATAAACCAGTTAAAACCGCAAAGCAAAGAGGG-----GCAG-------------TCTCA--------------------------
droRho1	scf7180000777726:14126-14356 +		G---------------------------------------------------GAACAAAGTCGCTATTACAACTTGCGCCGACGGGAATGGAGACCGACCATTGGGATGTA----GGTTTGGGTCCGAACTCACCACCTGTCCAACGCCGCGGAGGCGTTCAATGCCAAACTAGCTCCAAAGTTCGAAGGATCAT----------AAAATTTCTGTCACCAAACATCGCCAGAGTCCAACTTCGAGGGACACGCAAGCGTCGCAACGCAAATCTAGCCGATTTGAAACCCTTTCAT-------------------------------------------------------------
droBia1	scf7180000298008:63742-63936 +		G-----------------------------------------------------------------------------------ACAATGGACACCAGCGGTGGGGGACGC----CGTGTGGGCCAAGGAACATCATTTGTCAAAGGCGGCCGAGGGGTTCGCAGCAAAGTTGGCCCCAAGATACGACGGGCCTTACCAGGTCATGGATTTTGCGTAACCAGTAATCTGCAAAATACGGCACACA------AAAAAAGAGAGGACCATCCACGTGAGCGAGCTGAAAC---------------------------------------------------------------------
droTak1	scf7180000415867:494846-495069 -		A----------------------------------------------------------------------ATCTCCGAAGGCGACCATGGAAGCCGAAGGTTGGGGACAA----GGTCTGGGTCAAGGAGCACCACCTGTCCAAGGCAGTAGAGGGCTTCGCGGCGAAATTGGCCCCAAAATTCGATGGGCCGTTTAAAATCACAAAGTTCACCTCGCCGGTGATCTGCAAGTTACGGCACGAGGAAAGCGGCAAGGAAAAAACAGCACACATTAGCGATCTTAAGCCCGGGAGT-------GA----------------------------------------------------
dm3	chrU:5887228-5887529 +		ATTGAAAGAAATCTTCGAGCTGGTGCGGAGGAATTTGGAGAAGGCGGCCCAGGATCAGGCACGCCACTATAATCTCCGAAGACGGCCGTGGAAACCCAAGGTGAGGGACCC----AGTATGGGCCAAAGAGCACAACCTGTCAAAGGCAGCCGAAGGTTTCGCAGCAAAATTGGCCCCGAGATTTGACGGGCCGTATAGGATAAAGAAATTCACGTCACCAGTAATATGCGTCCTGGAACACAAAACAACCAAGAAGGAAAAGACAGCACACATTAGCGATCTGAAGCCGGGAAGC-------GCGGGCGCCG--------------------------------------------
droSim2	node_73189:2294-2548 -		G----------------------------------------------------ATCAGGCACGACACTATAATCTCAGAAGACGGCCGTGGAAACCCAAGGTGCGGGACAC----AGTATGGGCCAAAGAGCACCACCTGTCAAAGGCAGCCGAAGGTTTCGCGGCAAAATTGGCCCGAAGATTTGACGGGCCGTACACGATAAAGAAATTCACGGCACCAGTTATATGCGTCCTAGAACACAAAACGACCAAGAAAGAAAAGACTGCTCACATCAGTGATCTGAAGCCGGGAAGC-------GCGGGAGTTA-------------CATCA--------------------------
droSec2	scaffold_7564:1013-1334 -		GGTGCG---------------------GAGGAATATGGAGAAGGCGGCACAGGATCAGGCACGGCACTACAACCTCAGAAGACGGCCGTGGAAACCCAAGGTGCGGGAAAC----AGTATGGGCCAAAGAGCACCACCTGTCAAAGGCAGCCGAAGGTTTCGCGGCAAAATTAGCCCCAAGATTTGACGGGCCGTACACGATAAAGAAATTCACGTCACCAGTTATATGCGTCCTAGAACACAAGACGACTAAGAAAGAAAAGACCGCGCACATCAGCGATCTGAAGCCGGGAAGC-------GCGGACGCCGACGGGCCAGGAGATTTCGAATTTTAATTTAAAAAAAA---ATAA
droYak3	v2_chr2L_random_032:109653-109884 -		A----------------------------------------------------------------------ATCTCCAAAGGAGGCCGTAGAAACCCAAGGTGGGAGAAAC----TGTATGGGCCAAAGAGCACCACCTGTCGAAAGCAGCCGAGGGCTTCGCGGCGAAACTGGCACCAAGGTTCGACGGGCCTTTCAAAATAAAGAAATTCACATCACCAGTAATTTGTGTATTGGAACACGCAACAACGAGGAAGACGAAAACGGTTCATATTGGCGACTTGAAGCCGAGAAGC-------GCGGGCGCCG--------------------------------------------
droEre2	scaffold_2867:338-568 -		A----------------------------------------------------------------------ATCTCCGGAGACGGCCGTGGTAACCCAAGGTGGGGGACAC----AGTGTGGGCCAAGGAACACCACTTTTCGAAGGCAGGTGAAGGCTTTGCAGCGAAGTTGGCGCCAAGGTTCGACGGGCCGTTCAGGATAAAGAAGTTCATTTCACCGGTTATCTGCATCCTGGAACACGCGGCAACCAAGAAGGCGCAAACGGCACACATAAGCGACTTGAAGCCGGGAAGC-------GCGGGAGTT---------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droMoj3

GATGCGCGAAGTGTTCG-------------------------------------------------------------CC-GCGGCAGTGGAAGCCGGCCTTATGGGACAAGGTAAGTGTGGGCAAAAGAACGCCACTTGTCCAATGCCGCAGAGGGATTCGCTGTAAAACCAACG---CGTTATGGAGGCCCATATACAGT---------TTTGTCTCCAGTCATCTGCCGGATCAAGT------------TAGAGGCGAGGACGGCGCATGTGGCGGATCTCAAGCCGTGGAGC-------AATGGAGCTG-------------TTTCATTTTTTTTTTTAAATAAAAGGGAGTG	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
.............................................................................................................................................................................................................................................................................CATGTGGCGGATCTCAAGCCG...................................................................	21	20	0.05	1	0	0	1	0	0	0

droVir3

A---------------------------------------------------------------------------------------------------------------------------------GCACCAGTTGTCCAACGCTGCCGAAGGTTTCGCCGCAAAGTTGGCACCCAAATTTGACAGCCCCTACAAAGTCTT--------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
..................................................................................................................................GCACCAGTTGTCCAACGCTGCCGAAGGTT......................................................................................................................................................................................................	29	20	0.25	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5
..................................................................................................................................GCACCAGTTGTCCAACGCTGCCGAAGG........................................................................................................................................................................................................	27	20	0.20	4	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
..................................................................................................................................GCACCAGTTGTCCAACGCTGCCGAAG.........................................................................................................................................................................................................	26	20	0.20	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................GCACCAGTTGTCCAACGCTGCCGAAGGT.......................................................................................................................................................................................................	28	20	0.15	3	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................CGAAGGTTTCGCCGCAAAGTTGGCA.....................................................................................................................................................................................	25	20	0.10	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................GCACCAGTTGTCCAACGCTGCCGA...........................................................................................................................................................................................................	24	20	0.10	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................CGAAGGTTTCGCCGCAAAGTTGGCACC...................................................................................................................................................................................	27	20	0.10	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................TTTCGCCGCAAAGTTGGCACC...................................................................................................................................................................................	21	20	0.10	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................GCACCAGTTGTCCAACGCTGCCGAT..........................................................................................................................................................................................................	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
..............................................................................................................................................................TTCGCCGCAAAGTTGGCACCCAAA...............................................................................................................................................................................	24	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................CGCTGCCGAAGGTTTCGCCGCAAAGT..........................................................................................................................................................................................	26	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................CGAAGGTTTCGCCGCAAAGTTGGCAC....................................................................................................................................................................................	26	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................GCACCAGTTGTCCAACGCTGCCGAA..........................................................................................................................................................................................................	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
..............................................................................................................................................................TTCGCCGCAAAGTTGGCACCCAAATTT............................................................................................................................................................................	27	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................TTCGCCGCAAAGTTGGCACCCAAATT.............................................................................................................................................................................	26	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................CCGAAGGTTTCGCCGCAAAGTTGGCATT...................................................................................................................................................................................	28	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................CACCAGTTGTCCAACGCTGCCGAAG.........................................................................................................................................................................................................	25	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................CAGTTGTCCAACGCTGCCGAAGG........................................................................................................................................................................................................	23	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................CGAAGGTTTCGCCGCAAAGTTGG.......................................................................................................................................................................................	23	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................GCACCAGTTGTCCAACGCTGCCGT...........................................................................................................................................................................................................	24	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................GCACCAGTTGTCCAACGCTGC..............................................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................CACCAGTTGTCCAACGCTGCCGAA..........................................................................................................................................................................................................	24	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................GCACCAGTTGTCCAACGCT................................................................................................................................................................................................................	19	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................CGAAGGTTTCGCCGCAAAGTTGGCACCC..................................................................................................................................................................................	28	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................GCACCAGTTGTCCAACGCTGCC.............................................................................................................................................................................................................	22	20	0.05	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droGri2

CACAA-----------------------------------------------------------------GGCCTGCGTCGTAGTCCGTGGAAACCCAATATCGGAGACAG----AGTGTGGGTGAAATTACACCACCTGTCGAATGCAGCAGTAGGATTCGCGGCGAAGCTATCACCGAGATATGGGGGCCCTTACCAGATTGTAGATTTCACATCACCCGTAATATGCAAGATAAAGGGCATAACGGACAGGCGGATAAGGACAGCACACGTGAGCCACCTGAAGCCGCACAGC-------GA----------------------------------------------------	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
No Reads

droWil2

A-------------------------------------------------------------------------------------------------------------------GTATGGGCAAAAGAACACCATCTTTCAAATGCTGCAGAAGGATTTGCAGCGAAGCTGGCTCCAAGGTTTGGAGGCCCATATGAAGTAATCGGTTTCGTGTCTCCGGTCGTATGTAAATTACGGCACAAGGAAACGGGGAAAAACCGCCAAGCACATATCAGCCAGATGAAGCAAAAAATA---------------------------------------------------------TGTG	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
......................................................................................................................................CATCTTTCAAATGCTGCAGAAGG........................................................................................................................................................................................................	23	7	0.29	2	0	2	0	0	0
..............................................................................................................................AAGAACACCATCTTTCAAATGCTGC..............................................................................................................................................................................................................	25	7	0.29	2	0	2	0	0	0
.........................................................................................................................GGCAAAAGAACACCATCTTTCAAATG..................................................................................................................................................................................................................	26	6	0.17	1	0	1	0	0	0
..........................................................................................................................................................................................................................................................................GCACATATCAGCCAGATGAAGC.....................................................................	22	19	0.16	3	0	3	0	0	0
...........................................................................................................................CAAAAGAACACCATCTTTCAAATGCT................................................................................................................................................................................................................	26	7	0.14	1	0	1	0	0	0
.....................................................................................................................................CCATCTTTCAAATGCTGCAGAAGGA.......................................................................................................................................................................................................	25	7	0.14	1	0	1	0	0	0
.....................................................................................................................................CCATCTTTCAAATGCTGCAGAAGG........................................................................................................................................................................................................	24	7	0.14	1	0	1	0	0	0
........................................................................................................................GGGCAAAAGAACACCATCTTTCA......................................................................................................................................................................................................................	23	7	0.14	1	0	1	0	0	0
...........................................................................................................................CAAAAGAACACCATCTTTCAAATGCTG...............................................................................................................................................................................................................	27	7	0.14	1	0	1	0	0	0
.....................................................................................................................................CCATCTTTCAAATGCTGCAGAAG.........................................................................................................................................................................................................	23	7	0.14	1	0	1	0	0	0
..............................................................................................................................AAGAACACCATCTTTCAAATGCTG...............................................................................................................................................................................................................	24	7	0.14	1	0	1	0	0	0
..............................................................................................................................................AAATGCTGCAGAAGGATTTG...................................................................................................................................................................................................	20	15	0.13	2	0	0	0	2	0
......................................................................................................................................CATCTTTCAAATGCTGCAGAA..........................................................................................................................................................................................................	21	8	0.13	1	0	1	0	0	0
.....................................................................................................................................CCATCTTTCAAATGCTGCAGAA..........................................................................................................................................................................................................	22	8	0.13	1	0	1	0	0	0
.......................................................................................................................................................................................................................................................................CAAGCACATATCAGCCAGATGAAGC.....................................................................	25	18	0.11	2	0	2	0	0	0
.........................................................................................................................................................................................................................................................................AGCACATATCAGCCAGATGAA.......................................................................	21	20	0.10	2	0	2	0	0	0
..............................................................................................................................................AAATGCTGCAGAAGGATTTGCA.................................................................................................................................................................................................	22	15	0.07	1	0	1	0	0	0
.......................................................................................................................................................................................................................................................................CAAGCACATATCAGCCAGATGAAG......................................................................	24	18	0.06	1	0	1	0	0	0
..........................................................................................................................................................................................................................................................................GCACATATCAGCCAGATGAAGCA....................................................................	23	19	0.05	1	0	1	0	0	0
...........................................................................................................................................................................................................................................................................CACATATCAGCCAGATGAAGCAA...................................................................	23	19	0.05	1	0	1	0	0	0
........................................................................................................................GGGCAAAAGAACACCATCTTT........................................................................................................................................................................................................................	21	20	0.05	1	0	1	0	0	0
.....................................................................................................................TATGGGCAAAAGAACACCATCTT.........................................................................................................................................................................................................................	23	20	0.05	1	0	0	0	1	0
........................................................................................................................GGGCAAAAGAACACCATCTTTC.......................................................................................................................................................................................................................	22	20	0.05	1	0	1	0	0	0

dp5

G---------------------------------------------------GATCAGGCCAGGCACTACAACCTGAGAAGAAGACCATGGAGACCCAAAGTGGGAGAGGT----CGTATGGGCCAAACAGCACCACCTTTCCAATGCAGCTGAGGGATTTGCCGCAAAGCTGGCACCAAGGTACGATGGGCCATACCGGATAGAGGACTTTATATCCCCAGTTATCTGCCACCTAAGAAAGGAGGGCGACAGGAAGAAGAGAACGGCACACATACGAGATCTGTAACCCCAACCCGAGGAGCGA----------------------------------------------------	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
.......................................................................................................................................................................................................................................................CGACAGGAAGAAGAGAACGGC.........................................................................................	21	7	26.43	185	0	21	4	0	3	0	0	151	6	0
..............................................................................................................................................................................................................................................................................ACATACGAGATCTGTAACCCCAAC...............................................................	24	1	14.00	14	0	8	0	1	0	0	0	3	2	0
.....................................................................................................................................................................................................................................................GGCGACAGGAAGAAGAGAACGGC.........................................................................................	23	7	11.43	80	0	56	2	0	0	0	0	22	0	0
..........................................................................................................................................................................................................................................TAAGAAAGGAGGGCGACAGGA......................................................................................................	21	13	6.62	86	0	79	3	0	0	2	2	0	0	0
..........................................................................................................................................................................................................................................TAAGAAAGGAGGGCGACAGGAAG....................................................................................................	23	6	5.83	35	0	31	0	0	0	0	1	3	0	0
.......................................................................................................................................................................................................................................................CGACAGGAAGAAGAGAACGGCT........................................................................................	22	7	5.57	39	0	12	0	0	0	0	0	27	0	0
..........................................................................................................................................................................................................................................TAAGAAAGGAGGGCGACAGG.......................................................................................................	20	13	5.54	72	0	69	2	0	0	0	1	0	0	0
.....................................................................................................................................................................................................................................................GGCGACAGGAAGAAGAGAACGG..........................................................................................	22	7	5.43	38	0	32	0	0	1	0	0	5	0	0
.................................................................................................................................................................................CAAGGTACGATGGGCCATACCGG.............................................................................................................................................................	23	3	5.33	16	0	13	0	1	0	0	1	1	0	0
.......................................................................................................................................................................................................................................................CGACAGGAAGAAGAGAACGGCAC.......................................................................................	23	2	5.00	10	0	5	1	0	0	0	0	3	1	0
..........................................................................................................................................................................................................................................TAAGAAAGGAGGGCGACAGGAA.....................................................................................................	22	13	4.69	61	0	55	1	0	0	0	0	5	0	0
..............................................................................................................................................................................................................................................................................ACATACGAGATCTGTAACCCCAACC..............................................................	25	1	4.00	4	0	4	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................GGCGACAGGAAGAAGAGAACGGCA........................................................................................	24	2	4.00	8	0	8	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................TAAGAAAGGAGGGCGACAGGAAGA...................................................................................................	24	6	3.50	21	0	12	1	0	0	0	1	7	0	0
.....................................................................................................................................................................................................................................................GGCGACAGGAAGAAGAGAACGGCAC.......................................................................................	25	2	3.50	7	0	7	0	0	0	0	0	0	0	0
.................................................................................................................................................................................CAAGGTACGATGGGCCATACCG..............................................................................................................................................................	22	3	3.33	10	0	10	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................TAAGAAAGGAGGGCGACAG........................................................................................................	19	13	3.23	42	0	39	0	0	0	0	0	3	0	0
..............................................................................................................................................................................................................................................................................ACATACGAGATCTGTAACCCCA.................................................................	22	1	3.00	3	0	3	0	0	0	0	0	0	0	0
...................................................................TACAACCTGAGAAGAAGACCATG...........................................................................................................................................................................................................................................................................	23	1	3.00	3	0	2	0	0	0	0	0	1	0	0
.......................................................................................................................................................................................................................................................CGACAGGAAGAAGAGAACGGCACAC.....................................................................................	25	2	3.00	6	0	2	0	0	0	0	0	4	0	0
.......................................................................................................................................................................................................................................................CGACAGGAAGAAGAGAACGG..........................................................................................	20	7	3.00	21	0	13	2	0	1	0	0	5	0	0
...................................................................................GACCATGGAGACCCAAAGTGGGAGA.........................................................................................................................................................................................................................................................	25	1	3.00	3	0	3	0	0	0	0	0	0	0	0
...................................................................................GACCATGGAGACCCAAAGTGGGAGAGG.......................................................................................................................................................................................................................................................	27	1	3.00	3	0	3	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................CGACAGGAAGAAGAGAACGGCACACA....................................................................................	26	2	3.00	6	0	2	0	0	0	0	0	4	0	0
.......................................................................................................................................................................................................................................................CGACAGGAAGAAGAGAACGGCACA......................................................................................	24	2	3.00	6	0	5	0	0	0	0	0	1	0	0
.....................................................................................................................................................................................................................................................GGCGACAGGAAGAAGAGAACGGCT........................................................................................	24	7	2.71	19	0	18	0	0	0	0	0	0	1	0
.................................................................................................................................................................................CAAGGTACGATGGGCCATAC................................................................................................................................................................	20	12	2.25	27	0	25	0	0	1	0	0	1	0	0
.................................................................................................................................................................................CAAGGTACGATGGGCCATACCGGA............................................................................................................................................................	24	3	2.00	6	0	6	0	0	0	0	0	0	0	0
.....................................................................CAACCTGAGAAGAAGACCATGGAG........................................................................................................................................................................................................................................................................	24	1	2.00	2	0	0	0	0	0	0	0	2	0	0
....................................................................................ACCATGGAGACCCAAAGTGGGAGAGG.......................................................................................................................................................................................................................................................	26	1	2.00	2	0	2	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................TAAGAAAGGAGGGCGACAGGAAGAAG.................................................................................................	26	6	2.00	12	0	8	0	0	0	0	2	2	0	0
...................................................................TACAACCTGAGAAGAAGACCATGG..........................................................................................................................................................................................................................................................................	24	1	2.00	2	0	1	0	0	0	0	0	1	0	0
..............................................................................................................................................................................................................................................................................ACATACGAGATCTGTAACCCCAACCC.............................................................	26	1	2.00	2	0	2	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................TAAGAAAGGAGGGCGACAGGAAGAA..................................................................................................	25	6	2.00	12	0	4	0	0	0	0	0	8	0	0
.......................................................................................................................................................................................................................................................CGACAGGAAGAAGAGAACGGCA........................................................................................	22	2	2.00	4	0	2	0	0	0	0	0	2	0	0
..........................................................................TGAGAAGAAGACCATGGAGACCCAAAG................................................................................................................................................................................................................................................................	27	1	2.00	2	0	2	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................ACATACGAGATCTGTAACCCC..................................................................	21	1	2.00	2	0	0	0	0	0	0	0	2	0	0
.................................................................................................................................................................................CAAGGTACGATGGGCCATACC...............................................................................................................................................................	21	12	1.92	23	0	23	0	0	0	0	0	0	0	0
.................................................................................................................................................................................CAAGGTACGATGGGCCATACCGGAT...........................................................................................................................................................	25	3	1.67	5	0	5	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................TAAGAAAGGAGGGCGACA.........................................................................................................	18	14	1.64	23	0	23	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................GCGACAGGAAGAAGAGAACGGC.........................................................................................	22	7	1.57	11	0	10	0	0	1	0	0	0	0	0
.....................................................................................................................................................................................................................................................GGCGACAGGAAGAAGAGAACG...........................................................................................	21	8	1.38	11	0	11	0	0	0	0	0	0	0	0
.................................................................................................................................................................................CAAGGTACGATGGGCCATA.................................................................................................................................................................	19	13	1.08	14	0	14	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................CATACGAGATCTGTAACCCCAACC..............................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................CCAAACAGCACCACCTTTCCAATGCAG...............................................................................................................................................................................................................	27	3	1.00	3	0	3	0	0	0	0	0	0	0	0
..................................................................................AGACCATGGAGACCCAAAGTGG.............................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................TGGGAGAGGT----CGTATGGG..........................................................................................................................................................................................................................................	18	3	1.00	3	0	3	0	0	0	0	0	0	0	0
.......................................................................................................................................................TGAGGGATTTGCCGCAAAGCT.........................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................................................................................ACCATGGAGACCCAAAGTGGGAGAG........................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................................CAACCTGAGAAGAAGACC..............................................................................................................................................................................................................................................................................	18	15	1.00	15	0	0	0	0	0	0	0	15	0	0
...................................................................................GACCATGGAGACCCAAAGTGGGAGAG........................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......................................................................................CATGGAGACCCAAAGTGGGAGAGG.......................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................ACATACGAGATCTGTAACCCCAA................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................................CAACCTGAGAAGAAGACCATC...........................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	1	0	0
......................................................................AACCTGAGAAGAAGACCATGGA.........................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................CATACGAGATCTGTAACCCCAAC...............................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................TGAGGGATTTGCCGCAAAGCTT........................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................GCGACAGGAAGAAGAGAACGGCA........................................................................................	23	2	1.00	2	0	2	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................TATCCCCAGTTATCTGCCACCTAAGA......................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................CATACGAGATCTGTAACCCCA.................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................ACATACGAGATCTGTAACCCCAACCCGA...........................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................AGTTATCTGCCACCTAAGAAAGGA.................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................................CAACCTGAGAAGAAGACCATGGAGA.......................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................CCAAACAGCACCACCTTTCCAATGC.................................................................................................................................................................................................................	25	3	1.00	3	0	3	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................CACATACGAGATCTGTAACCC...................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	1	0
.....................................................................CAACCTGAGAAGAAGACCATGGA.........................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................CGACAGGAAGAAGAGAACG...........................................................................................	19	8	0.88	7	0	4	0	0	0	0	0	3	0	0
...........................................................................................................................................................................................................................................AAGAAAGGAGGGCGACAGGAAG....................................................................................................	22	6	0.83	5	0	5	0	0	0	0	0	0	0	0
..............................................................................................................T----CGTATGGGCCAAACAGCACCA.............................................................................................................................................................................................................................	22	9	0.78	7	0	7	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................AAGAAAGGAGGGCGACAGGA......................................................................................................	20	13	0.77	10	0	10	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................GACAGGAAGAAGAGAACGGC.........................................................................................	20	7	0.71	5	0	2	0	0	0	0	0	3	0	0
......................................................................................................................................................................................................................................................GCGACAGGAAGAAGAGAACGG..........................................................................................	21	7	0.71	5	0	4	0	0	0	0	0	0	1	0
..................................................................................................................................................................................AAGGTACGATGGGCCATACCG..............................................................................................................................................................	21	3	0.67	2	0	2	0	0	0	0	0	0	0	0
...........................................................................................................................CCAAACAGCACCACCTTTCCAATG..................................................................................................................................................................................................................	24	3	0.67	2	0	2	0	0	0	0	0	0	0	0
.....................................................................CAACCTGAGAAGAAGAC...............................................................................................................................................................................................................................................................................	17	15	0.67	10	0	0	0	0	0	0	0	10	0	0
.....................................................................................................................................................................................................................................................GGCGACAGGAAGAAGAGAAC............................................................................................	20	8	0.63	5	0	5	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................CGACAGGAAGAAGAGAACGGCTA.......................................................................................	23	7	0.57	4	0	0	0	0	0	0	0	4	0	0
..................................................................................................................................................................................................................................................GAGGGCGACAGGAAGAAGAGAAC............................................................................................	23	7	0.57	4	0	1	0	0	0	0	0	3	0	0
.............................................................AGGCACTACAACCTGAGAAGAAGAC...............................................................................................................................................................................................................................................................................	25	14	0.57	8	0	1	0	0	0	0	0	7	0	0
.......................................................................................................................................................................................................................................................CGACAGGAAGAAGAGAACGGCACACAA...................................................................................	27	2	0.50	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................GACAGGAAGAAGAGAACGGCACACA....................................................................................	25	2	0.50	1	0	0	0	0	0	0	0	1	0	0
.....................................................................................................................................................................................................................................................GGCGACAGGAAGAAGAGAACGGCACACA....................................................................................	28	2	0.50	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................GAAGAGAACGGCACACAT...................................................................................	18	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................GAACGGCACACATACGAGATC...........................................................................	21	2	0.50	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................GGGCGACAGGAAGAAGAGAACGGCAC.......................................................................................	26	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.............................................................AGGCACTACAACCTGAGAAGAAGA................................................................................................................................................................................................................................................................................	24	14	0.50	7	0	0	0	0	0	0	0	7	0	0
...........................................................................................................................................................................................................................................................AGGAAGAAGAGAACGGCACACATA..................................................................................	24	2	0.50	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................GGGAGAGGT----CGTATGGGCCAAA.....................................................................................................................................................................................................................................	22	2	0.50	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................GCGACAGGAAGAAGAGAACGGCAC.......................................................................................	24	2	0.50	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................GCGACAGGAAGAAGAGAACGGCT........................................................................................	23	7	0.43	3	0	2	0	0	0	0	0	1	0	0
..................................................................................................................................................................................................................................................GAGGGCGACAGGAAGAAGAGAACGGC.........................................................................................	26	7	0.43	3	0	2	0	0	0	0	0	0	1	0
.................................................................................................................................................................................CAAGGTACGATGGGCCATACA...............................................................................................................................................................	21	12	0.42	5	0	5	0	0	0	0	0	0	0	0
.................................................................................................................................................................................CAAGGTACGATGGGCCATAAA...............................................................................................................................................................	21	13	0.38	5	0	4	0	0	1	0	0	0	0	0
...........................................................................................................................................................................................................................................AAGAAAGGAGGGCGACAGG.......................................................................................................	19	13	0.38	5	0	5	0	0	0	0	0	0	0	0
...............................................................................................CCAAAGTGGGAGAGGT----CGTATGGGCCAA......................................................................................................................................................................................................................................	28	3	0.33	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................GTGGGAGAGGT----CGTATGGG..........................................................................................................................................................................................................................................	19	3	0.33	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................TACGATGGGCCATACCGGATAGA........................................................................................................................................................	23	3	0.33	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................AACAGCACCACCTTTCCAATGC.................................................................................................................................................................................................................	22	3	0.33	1	0	0	1	0	0	0	0	0	0	0
........................................................................................TGGAGACCCAAAGTGGGAGAGGT----CG................................................................................................................................................................................................................................................	25	3	0.33	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................TACGATGGGCCATACCGGATAGAGG......................................................................................................................................................	25	3	0.33	1	0	0	0	0	1	0	0	0	0	0
..................................................................................................................................................................................AAGGTACGATGGGCCATACCGG.............................................................................................................................................................	22	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................AAAGTGGGAGAGGT----CGTATGGGC.........................................................................................................................................................................................................................................	23	3	0.33	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................T----CGTATGGGCCAAACAGCAC...............................................................................................................................................................................................................................	20	9	0.33	3	0	3	0	0	0	0	0	0	0	0
............................................................................................................................CAAACAGCACCACCTTTCCAATGC.................................................................................................................................................................................................................	24	3	0.33	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................ACTTTATATCCCCAGTTATCTGCCACC...........................................................................................................................	27	3	0.33	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................CAAGGTACGATGGGCCATACCGT.............................................................................................................................................................	23	3	0.33	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................CCAAACAGCACCACCTTTCCAAT...................................................................................................................................................................................................................	23	3	0.33	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................TACCGGATAGAGGACTTTATATCC...........................................................................................................................................	24	3	0.33	1	0	0	1	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................AAGAAAGGAGGGCGACAGGAA.....................................................................................................	21	13	0.31	4	0	4	0	0	0	0	0	0	0	0
......................................................TCAGGCCAGGCACTACAACCTGAGA......................................................................................................................................................................................................................................................................................	25	14	0.29	4	0	4	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................GAGGGCGACAGGAAGAAGAGAACGG..........................................................................................	25	7	0.29	2	0	1	0	0	0	0	0	0	1	0
.......................................................................................................................................................................................................................................................CGACAGGAAGAAGAGAACGGT.........................................................................................	21	7	0.29	2	0	2	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................GGCGACAGGAAGAAGAGAACGGCTT.......................................................................................	25	7	0.29	2	0	2	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................AGGGCGACAGGAAGAAGAGAACGGC.........................................................................................	25	7	0.29	2	0	1	0	0	0	0	0	0	1	0
..............................................................................................................T----CGTATGGGCCAAACAGCAA...............................................................................................................................................................................................................................	20	11	0.27	3	0	3	0	0	0	0	0	0	0	0
..................................................................................................................................GCACCACCTTTCCAATGCAGC..............................................................................................................................................................................................................	21	4	0.25	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................AAGGTACGATGGGCCATACC...............................................................................................................................................................	20	12	0.25	3	0	3	0	0	0	0	0	0	0	0
..............................................................................................................................................................................CACCAAGGTACGATGGGCCATACC...............................................................................................................................................................	24	12	0.25	3	0	3	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................GCGACAGGAAGAAGAGAACG...........................................................................................	20	8	0.25	2	0	2	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................TAAGAAAGGAGGGCGACAGA.......................................................................................................	20	13	0.23	3	0	3	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................TAAGAAAGGAGGGCGACAGGT......................................................................................................	21	13	0.23	3	0	3	0	0	0	0	0	0	0	0
..............................................................................................................T----CGTATGGGCCAAACAGCACC..............................................................................................................................................................................................................................	21	9	0.22	2	0	2	0	0	0	0	0	0	0	0
......................................................TCAGGCCAGGCACTACAACCTGAGAAG....................................................................................................................................................................................................................................................................................	27	14	0.21	3	0	2	0	0	0	0	0	0	1	0
.........................................................................................................................................................................................................................................CTAAGAAAGGAGGGCGACAGGAAG....................................................................................................	24	6	0.17	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................CACCTAAGAAAGGAGGGCGACAGT.......................................................................................................	24	6	0.17	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................AAGGAGGGCGACAGGAAGAAGAGA..............................................................................................	24	6	0.17	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................ACCTAAGAAAGGAGGGCGA...........................................................................................................	19	6	0.17	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................ACCTAAGAAAGGAGGGCGACAGGA......................................................................................................	24	6	0.17	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................ACCTAAGAAAGGAGGGCGACAGGAA.....................................................................................................	25	6	0.17	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................TAAGAAAGGAGGGCGACAGGAAGAAA.................................................................................................	26	6	0.17	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................CAAGGTACGATGGGCCATACCC..............................................................................................................................................................	22	12	0.17	2	0	2	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................ACCTAAGAAAGGAGGGCGACAGG.......................................................................................................	23	6	0.17	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................AAGAAAGGAGGGCGACAGGAAGA...................................................................................................	23	6	0.17	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................TAAGAAAGGAGGGCGACAGGAAGAAGA................................................................................................	27	6	0.17	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................AAGAAAGGAGGGCGACAGGAAGAAG.................................................................................................	25	6	0.17	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................AAGAAAGGAGGGCGACAG........................................................................................................	18	13	0.15	2	0	2	0	0	0	0	0	0	0	0
..................................................................................................................................................................................AAGGTACGATGGGCCATA.................................................................................................................................................................	18	13	0.15	2	0	2	0	0	0	0	0	0	0	0
.................................................................................................................................................................................CAAGGTACGATGGGCCATAA................................................................................................................................................................	20	13	0.15	2	0	2	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................GACAGGAAGAAGAGAACGG..........................................................................................	19	7	0.14	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................GGAGGGCGACAGGAAGAAGAGAACG...........................................................................................	25	7	0.14	1	0	1	0	0	0	0	0	0	0	0
......................................................TCAGGCCAGGCACTACAACCTGAGAA.....................................................................................................................................................................................................................................................................................	26	14	0.14	2	0	1	1	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................GGGCGACAGGAAGAAGAGAACGGC.........................................................................................	24	7	0.14	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................GGAGGGCGACAGGAAGAAGAGAACGG..........................................................................................	26	7	0.14	1	0	1	0	0	0	0	0	0	0	0
.............................................................AGGCACTACAACCTGAGAAGAAGACA..............................................................................................................................................................................................................................................................................	26	14	0.14	2	0	0	0	0	0	0	0	2	0	0
..................................................................................................................................................................................................................................................GAGGGCGACAGGAAGAAGAGAACGGCT........................................................................................	27	7	0.14	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................CGACAGGAAGAAGAGAACGGA.........................................................................................	21	7	0.14	1	0	0	0	0	0	0	0	1	0	0
.................................................................................................................................................................................................................................................GGAGGGCGACAGGAAGAAGAGAAC............................................................................................	24	7	0.14	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................TGGCACCAAGGTACGATGGG......................................................................................................................................................................	20	15	0.13	2	0	2	0	0	0	0	0	0	0	0
...................................................................TACAACCTGAGAAGAAGAC...............................................................................................................................................................................................................................................................................	19	15	0.13	2	0	2	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................AGGAAGAAGAGAACGGCT........................................................................................	18	8	0.13	1	0	0	0	0	0	0	0	1	0	0
.....................................................................................................................................................................................................................................................GGCGACAGGAAGAAGAGAACA...........................................................................................	21	8	0.13	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................GGGCGACAGGAAGAAGAGAA.............................................................................................	20	8	0.13	1	0	0	1	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................AGGGCGACAGGAAGAAGAGAA.............................................................................................	21	8	0.13	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................GACAGGAAGAAGAGAACG...........................................................................................	18	8	0.13	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................CAGGAAGAAGAGAACGGC.........................................................................................	18	8	0.13	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................T----CGTATGGGCCAAACAGCACCACC...........................................................................................................................................................................................................................	24	8	0.13	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................T----CGTATGGGCCAAACAGCACA..............................................................................................................................................................................................................................	21	9	0.11	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................GGCGACAGGAAGAAGAGAAA............................................................................................	20	9	0.11	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................TAGAGGACTTTATATCCCC.........................................................................................................................................	19	9	0.11	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................T----CGTATGGGCCAAACAGCACCAC............................................................................................................................................................................................................................	23	9	0.11	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................TATGGGCCAAACAGCACCAA............................................................................................................................................................................................................................	20	11	0.09	1	0	1	0	0	0	0	0	0	0	0
..................................................................................................................................................................................AAGGTACGATGGGCCATAC................................................................................................................................................................	19	12	0.08	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................CAAGGTACGATGGGCCATT.................................................................................................................................................................	19	13	0.08	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................CCTAAGAAAGGAGGGCGACAG........................................................................................................	21	13	0.08	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................TAAGAAAGGAGGGCGACAGGAT.....................................................................................................	22	13	0.08	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................CTAAGAAAGGAGGGCGACAGGAA.....................................................................................................	23	13	0.08	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................AAGAAAGGAGGGCGACAGT.......................................................................................................	19	13	0.08	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................CTAAGAAAGGAGGGCGACAGGA......................................................................................................	22	13	0.08	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................CAAGGTACGATGGGCCAT..................................................................................................................................................................	18	13	0.08	1	0	1	0	0	0	0	0	0	0	0
.......................................................CAGGCCAGGCACTACAACCTGAGAA.....................................................................................................................................................................................................................................................................................	25	14	0.07	1	0	1	0	0	0	0	0	0	0	0
............................................................CAGGCACTACAACCTGAGAAGAAGAC...............................................................................................................................................................................................................................................................................	26	14	0.07	1	0	0	1	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................TAAGAAAGGAGGGCGACAGGAAT....................................................................................................	23	14	0.07	1	0	0	1	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................TAAGAAAGGAGGGCGACT.........................................................................................................	18	14	0.07	1	0	1	0	0	0	0	0	0	0	0
.............................................................AGGCACTACAACCTGAGAAGAAG.................................................................................................................................................................................................................................................................................	23	14	0.07	1	0	0	0	0	0	0	0	1	0	0
......................................................TCAGGCCAGGCACTACAAA............................................................................................................................................................................................................................................................................................	19	14	0.07	1	0	1	0	0	0	0	0	0	0	0

droPer2

G---------------------------------------------------GATCAGGCCAGGCATTACAACCTGAGAAGAAGACCATGGAGACCCAAAGTGGGAGAGGT----CGTATGGGCCAAACAGCACCACCTTTCCAATGCAGCGGAGGGATTTGC--CAAAGCTGGCACCAAGGTACGATGGGCCATACCGGATAGAGGACTTTATATCCCCAGTTATCTGCCACCTAAGAAAGGAGGGCGACAGGAAGAAGAGAACGGCACACATACGAGATCTGTAACCCCAACCCGAGGAGCGA----------------------------------------------------	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
...........................................................................................................................................TTCCAATGCAGCGGAGGGATTTG...................................................................................................................................................................................................	23	3	1.67	5	0	5	0	0	0	0
..............................................................................................................................................................................CACCAAGGTACGATGGGCCATACCGGA............................................................................................................................................................	27	7	1.29	9	0	8	1	0	0	0
...........................................................................................................................................TTCCAATGCAGCGGAGGGATTT....................................................................................................................................................................................................	22	3	1.00	3	0	3	0	0	0	0
..............................................................................................................................................................................................................................................................................ACATACGAGATCTGTAACCCCAACCC.............................................................	26	1	1.00	1	0	1	0	0	0	0
..............................................................................................................................................................................................................................................................................ACATACGAGATCTGTAACCCCAA................................................................	23	1	1.00	1	0	1	0	0	0	0
..............................................................................................................................................................................................................................................................................ACATACGAGATCTGTAACCCCAAC...............................................................	24	1	1.00	1	0	0	0	0	0	1
...........................................................................................................................................TTCCAATGCAGCGGAGGGATTTGC--CAAA............................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0
.................................................................................AAGACCATGGAGACCCAAAGTGG.............................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0
.................................................................................................................................................................................CAAGGTACGATGGGCCATACCG..............................................................................................................................................................	22	7	0.71	5	0	5	0	0	0	0
............................................................................................................................................TCCAATGCAGCGGAGGGATTTG...................................................................................................................................................................................................	22	3	0.67	2	0	2	0	0	0	0
..............................................................................................................................................................................CACCAAGGTACGATGGGCCATACCGG.............................................................................................................................................................	26	7	0.57	4	0	4	0	0	0	0
...........................................................................................................................................TTCCAATGCAGCGGAGGGATT.....................................................................................................................................................................................................	21	8	0.50	4	0	4	0	0	0	0
...........................................................................................................................................TTCCAATGCAGCGGAGGGATTTGC--................................................................................................................................................................................................	24	3	0.33	1	0	1	0	0	0	0
.......................................................................................................................................................................................................................................ACCTAAGAAAGGAGGGCGACAGG.......................................................................................................	23	20	0.30	6	0	6	0	0	0	0
.......................................................................................................................................................................................................................................ACCTAAGAAAGGAGGGCGACAGGA......................................................................................................	24	20	0.30	6	0	6	0	0	0	0
.................................................................................................................................................................................CAAGGTACGATGGGCCATACCGGA............................................................................................................................................................	24	7	0.29	2	0	2	0	0	0	0
.............................................................................................................................................................................................................................GTTATCTGCCACCTAAGAAAGGAG................................................................................................................	24	11	0.27	3	0	3	0	0	0	0
...............................................................................................................................ACAGCACCACCTTTCCAATGCAGCGG............................................................................................................................................................................................................	26	4	0.25	1	0	1	0	0	0	0
.......................................................................................................................TGGGCCAAACAGCACCACCTTTCCAATGC.................................................................................................................................................................................................................	29	4	0.25	1	0	1	0	0	0	0
..............................................................................................................................................................................CACCAAGGTACGATGGGCCATA.................................................................................................................................................................	22	20	0.20	4	0	4	0	0	0	0
......................................................TCAGGCCAGGCATTACAACCT..........................................................................................................................................................................................................................................................................................	21	5	0.20	1	0	1	0	0	0	0
..............................................................................................................T----CGTATGGGCCAAACAGCACCA.............................................................................................................................................................................................................................	22	20	0.20	4	0	4	0	0	0	0
......................................................TCAGGCCAGGCATTACAACCTGAGA......................................................................................................................................................................................................................................................................................	25	5	0.20	1	0	1	0	0	0	0
..........................................................................................................................................................................................................................................TAAGAAAGGAGGGCGACAGGAAGA...................................................................................................	24	20	0.20	4	0	4	0	0	0	0
.........................................................................................................................................................................................................TAGAGGACTTTATATCCCCAGTTATC..................................................................................................................................	26	10	0.20	2	0	2	0	0	0	0
.......................................................................................................................................................................................................................................ACCTAAGAAAGGAGGGCGACAGGAA.....................................................................................................	25	20	0.20	4	0	4	0	0	0	0
..................................................................................................................................GCACCACCTTTCCAATGCAGCGG............................................................................................................................................................................................................	23	5	0.20	1	0	1	0	0	0	0
.......................................................................................................................................................................................................................................ACCTAAGAAAGGAGGGCGACAG........................................................................................................	22	20	0.20	4	0	4	0	0	0	0
.............................................................................................................................................................................................................................GTTATCTGCCACCTAAGAAAGGA.................................................................................................................	23	11	0.18	2	0	2	0	0	0	0
.............................................................................................................................................................................................................................................................GAAGAAGAGAACGGCACACATACGAGAA............................................................................	28	11	0.18	2	2	0	0	0	0	0
.................................................................................................................................................................................CAAGGTACGATGGGCCATACC...............................................................................................................................................................	21	20	0.15	3	0	3	0	0	0	0
..............................................................................................................................................................................CACCAAGGTACGATGGGCCATACCG..............................................................................................................................................................	25	7	0.14	1	0	1	0	0	0	0
.................................................................................................................................................................................CAAGGTACGATGGGCCATACCGGATA..........................................................................................................................................................	26	7	0.14	1	0	1	0	0	0	0
...............................................................................................................................................................................ACCAAGGTACGATGGGCCATACCGG.............................................................................................................................................................	25	7	0.14	1	0	1	0	0	0	0
..................................................................................................................................................................................AAGGTACGATGGGCCATACCGG.............................................................................................................................................................	22	7	0.14	1	0	1	0	0	0	0
.................................................................................................................................................................................CAAGGTACGATGGGCCATACCGGAT...........................................................................................................................................................	25	7	0.14	1	0	1	0	0	0	0
................................................................................................................................................................................CCAAGGTACGATGGGCCATACCGGA............................................................................................................................................................	25	7	0.14	1	0	1	0	0	0	0
..............................................................................................................................................................................................GCCATACCGGATAGAGGACTTTATAT.............................................................................................................................................	26	7	0.14	1	0	1	0	0	0	0
...........................................................................................................................................TTCCAATGCAGCGGAGGGAA......................................................................................................................................................................................................	20	8	0.13	1	0	1	0	0	0	0
..........................................................................................................................................TTTCCAATGCAGCGGAGGG........................................................................................................................................................................................................	19	8	0.13	1	0	1	0	0	0	0
.........................................................................................................................................CTTTCCAATGCAGCGGAGGGA.......................................................................................................................................................................................................	21	8	0.13	1	0	1	0	0	0	0
..........................................................................................................................................................................................................................................................CAGGAAGAAGAGAACGGCACACATACGG...............................................................................	28	18	0.11	2	2	0	0	0	0	0
................................................................................................................................................................................................................................................................GAAGAGAACGGCACACATACGAGATC...........................................................................	26	9	0.11	1	0	1	0	0	0	0
..................................................................................................................................................................................................................................................................AGAGAACGGCACACATACGAGATC...........................................................................	24	9	0.11	1	0	1	0	0	0	0
..........................................................................................................................................................................................................................................................CAGGAAGAAGAGAACGGCACACATACGA...............................................................................	28	10	0.10	1	1	0	0	0	0	0
..............................................................................................................................................................................CACCAAGGTACGATGGGCCA...................................................................................................................................................................	20	20	0.10	2	0	2	0	0	0	0
...............................................................................................................................................................................ACCAAGGTACGATGGGCCATACC...............................................................................................................................................................	23	20	0.10	2	0	2	0	0	0	0
.................................................................................................................................................................................CAAGGTACGATGGGCCATAA................................................................................................................................................................	20	20	0.10	2	0	1	1	0	0	0
..........................................................................................................................................................................................................................................TAAGAAAGGAGGGCGACAGGAAG....................................................................................................	23	20	0.10	2	0	2	0	0	0	0
......................................................................................................................................................................................................................................CACCTAAGAAAGGAGGGCGACAGG.......................................................................................................	24	11	0.09	1	0	1	0	0	0	0
..........................................................................................................................................................................................................................................................CAGGAAGAAGAGAACGGCACACATA..................................................................................	25	11	0.09	1	1	0	0	0	0	0
..............................................................................................................................................................................................................................TTATCTGCCACCTAAGAAAGGA.................................................................................................................	22	11	0.09	1	0	1	0	0	0	0
......................................................................................................................................................................................................................................CACCTAAGAAAGGAGGGCGACA.........................................................................................................	22	11	0.09	1	0	1	0	0	0	0
...........................................................................................................................................TTCCAATGCAGCGGAGGGAAC.....................................................................................................................................................................................................	21	11	0.09	1	0	1	0	0	0	0
.........................................................................................................................................................................................................TAGAGGACTTTATATCCCCAC.......................................................................................................................................	21	11	0.09	1	0	1	0	0	0	0
.............................................................................................................................................................................................................................................................GAAGAAGAGAACGGCACACATACGAGA.............................................................................	27	11	0.09	1	1	0	0	0	0	0
.....................................................................................................TGGGAGAGGT----CGTATGGGCCAAACT...................................................................................................................................................................................................................................	25	12	0.08	1	0	1	0	0	0	0
..........................................................................................................................................................................................................................................................CAGGAAGAAGAGAACGGCAC.......................................................................................	20	12	0.08	1	0	1	0	0	0	0
........................................................................................................................................................................................................................................................GACAGGAAGAAGAGAACGGCACACA....................................................................................	25	12	0.08	1	0	1	0	0	0	0
................................................................................................CAAAGTGGGAGAGGT----CGTATGG...........................................................................................................................................................................................................................................	22	12	0.08	1	0	1	0	0	0	0
.....................................................................................................................................................................................................................................................GGCGACAGGAAGAAGAGAACGGCAC.......................................................................................	25	12	0.08	1	0	1	0	0	0	0
.........................................................................................................................................................................................................................................................ACAGGAAGAAGAGAACGGCACAC.....................................................................................	23	12	0.08	1	0	1	0	0	0	0
..............................................................................................................T----CGTATGGGCCAAACAGCACCACCC..........................................................................................................................................................................................................................	25	19	0.05	1	0	1	0	0	0	0
.................................................................................................................................................................................CAAGGTACGATGGGCCATA.................................................................................................................................................................	19	20	0.05	1	0	1	0	0	0	0
.......................................................................................................................................................................................................................................................CGACAGGAAGAAGAGAACGGC.........................................................................................	21	20	0.05	1	0	1	0	0	0	0
.............................................................................................................................................................................................................................................................GAAGAAGAGAACGGCACACATACGG...............................................................................	25	20	0.05	1	1	0	0	0	0	0
..........................................................................................................................................................................................................................................TAAGAAAGGAGGGCGACAGGAAGAA..................................................................................................	25	20	0.05	1	0	1	0	0	0	0
.............................................................................................................................................................................GCACCAAGGTACGATGGGCCA...................................................................................................................................................................	21	20	0.05	1	0	1	0	0	0	0
..............................................................................................................................................................................CACCAAGGTACGATGGGCCAT..................................................................................................................................................................	21	20	0.05	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................................AAGAAAGGAGGGCGACAGGAAGAAGA................................................................................................	26	20	0.05	1	0	1	0	0	0	0
..........................................................................................................................................................................................................................................TAAGAAAGGAGGGCGACAGGAA.....................................................................................................	22	20	0.05	1	0	0	0	0	0	1
..........................................................................................................................................................................................................................................TAAGAAAGGAGGGCGACAGGAAGAAG.................................................................................................	26	20	0.05	1	0	1	0	0	0	0
..............................................................................................................T----CGTATGGGCCAAACAGCACC..............................................................................................................................................................................................................................	21	20	0.05	1	0	1	0	0	0	0
..............................................................................................................................................................................CACCAAGGTACGATGGGCCATAAA...............................................................................................................................................................	24	20	0.05	1	0	1	0	0	0	0
..........................................................................................................................................................................................................................................TAAGAAAGGAGGGCGACAGGAAA....................................................................................................	23	20	0.05	1	0	1	0	0	0	0
..........................................................................................................................................................................................................................................TAAGAAAGGAGGGCGACAGG.......................................................................................................	20	20	0.05	1	0	1	0	0	0	0
....................................................................................................................GTATGGGCCAAACAGCACC..............................................................................................................................................................................................................................	19	20	0.05	1	0	1	0	0	0	0
..................................................................................................................................................................................AAGGTACGATGGGCCATACC...............................................................................................................................................................	20	20	0.05	1	0	1	0	0	0	0
...........................................................................................................................................................................TGGCACCAAGGTACGATGG.......................................................................................................................................................................	19	20	0.05	1	0	0	1	0	0	0

droAna3

ATTACAGGAAGTGTTCGAGCTGGA---------------------------------------------------------------GAGTTGCCCGAAGATTGGCGACTC----AGTGTGGGCAAAGGAGCACCATTTGTCCAAAGCGGCCGAAGGTTGCGCGGCGAAGTTAGCGCCAAAGTACGACGGGCCGTACACAGTGGTGAACTTTGTGTCACCAGTGATTGCTGTGCTACGTCACGCTGGCACAAGGAAGGAAAAGAAGGCCCACCTGAGTGAGCTAAAAGCCCAAG-C-------ACAGGAGTCG-------------GTGCAGGCATAAACCTAAACTAAACAAAACA	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
......GGAAGTGTTCGAGCTGGA---------------------------------------------------------------GAGTTGC.......................................................................................................................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................................................................................................AAGGAAAAGAAGGCCCACCTGAGTGAG............................................................................	27	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................AGCGCCAAAGTACGACGGGCC....................................................................................................................................................................	21	20	0.15	3	2	1	0	0	0	0
..................................................................................................................................GCACCATTTGTCCAAAGCGGCC.............................................................................................................................................................................................................	22	20	0.15	3	0	3	0	0	0	0
......................................................................................................................................................................................TACGACGGGCCGTACACAGTGGTGAAC....................................................................................................................................................	27	16	0.13	2	2	0	0	0	0	0
..............................................................................................................................................................................................................................................................................ACCTGAGTGAGCTAAAAGCCCAAG-C-------AC....................................................	27	9	0.11	1	1	0	0	0	0	0
............................................................................................................................................................................AGCGCCAAAGTACGACGGGC.....................................................................................................................................................................	20	20	0.10	2	0	1	1	0	0	0
..........................................................................................................................................................................TTAGCGCCAAAGTACGACGGGC.....................................................................................................................................................................	22	20	0.10	2	1	1	0	0	0	0
............................................................................................................................................................................AGCGCCAAAGTACGACGGGCCGTA.................................................................................................................................................................	24	20	0.10	2	2	0	0	0	0	0
.......................................................................................................................................................................................................................TCACCAGTGATTGCTGTGCTACG.......................................................................................................................	23	20	0.10	2	2	0	0	0	0	0
............................................................................................................................................................................AGCGCCAAAGTACGACGGGCCGT..................................................................................................................................................................	23	20	0.10	2	2	0	0	0	0	0
......................................................................................................................................................................GAAGTTAGCGCCAAAGTACGACGGGC.....................................................................................................................................................................	26	11	0.09	1	0	1	0	0	0	0
...................................................................................................................................................................................AAGTACGACGGGCCGTACACAGTGG.........................................................................................................................................................	25	15	0.07	1	1	0	0	0	0	0
...........................................................................................................................................................................TAGCGCCAAAGTACGACGGGC.....................................................................................................................................................................	21	20	0.05	1	0	0	0	0	0	1
..................................................................................................................................GCACCATTTGTCCAAAGCGGCCGA...........................................................................................................................................................................................................	24	20	0.05	1	1	0	0	0	0	0
...........................................................................................................................................................................TAGCGCCAAAGTACGACGGGCCGTA.................................................................................................................................................................	25	20	0.05	1	1	0	0	0	0	0
.......................................................................................................................................ATTTGTCCAAAGCGGCCGAAGG........................................................................................................................................................................................................	22	20	0.05	1	1	0	0	0	0	0
..........................................................................................................................................................................TTAGCGCCAAAGTACGACGGGCCG...................................................................................................................................................................	24	20	0.05	1	1	0	0	0	0	0
.................................................................................................................................AGCACCATTTGTCCAAAGCGGCCG............................................................................................................................................................................................................	24	20	0.05	1	1	0	0	0	0	0
...................................................................................................................................CACCATTTGTCCAAAGCGGCCGAAG.........................................................................................................................................................................................................	25	20	0.05	1	1	0	0	0	0	0
...........................................................................................................................................................................TAGCGCCAAAGTACGACGGGCCG...................................................................................................................................................................	23	20	0.05	1	1	0	0	0	0	0
...................................................................................................................................CACCATTTGTCCAAAGCGGCCGAA..........................................................................................................................................................................................................	24	20	0.05	1	1	0	0	0	0	0
..........................................................................................................................................................................TTAGCGCCAAAGTACGACGGG......................................................................................................................................................................	21	20	0.05	1	1	0	0	0	0	0
................................................................................................................................GAGCACCATTTGTCCAAAGCGGCCGT...........................................................................................................................................................................................................	26	20	0.05	1	1	0	0	0	0	0
..................................................................................................................................................................................................................................TGCTGTGCTACGTCACGCTGGC.............................................................................................................	22	20	0.05	1	1	0	0	0	0	0
..............................................................................................................................................................................................................................TGATTGCTGTGCTACGTCACGCTGGC.............................................................................................................	26	20	0.05	1	1	0	0	0	0	0
..........................................................................................................................................................................................ACGGGCCGTACACAGTGGTGAAC....................................................................................................................................................	23	20	0.05	1	0	1	0	0	0	0
.......................................................................................................................................................................AAGTTAGCGCCAAAGTACGACGGGCC....................................................................................................................................................................	26	20	0.05	1	0	1	0	0	0	0

droBip1

G---------------------------------------------------GACCAGGCGAGGCATTACAATTTACGGAGACGGAAGTGGAGCCCAAAGGTTGGCGAAAC----AGTGTGGGCAAAAGAGCACCATTTGTCGAAGGCGGCAGAGGGATTCGCTGCAAAACTAGCGCCGCGGTACGATGGGCCCTATACGGTCGTCAATTTCGTTTCGCCGGTAATTGTCATCATACGGCACGGAAGAACCAACAAAGAGAAGAGGGCACACATGAGGGAGCTGAAGTGCCGAGAA---------------------------------------------------------ATGG	Size	Hit Count	Total Norm	Total
No Reads

droKik1

CA------------------------------------------------------------------------TGCGTCGCCGTACCTGGAAGCCGGCCATGGGATCACT----CGTCTTGGTGCGACAACATCACCTCTCAAAAGCAGCAGAGGGATTCGCAGTGAAGCTTGCCCCAAAATTCGACGGGCCCTACAAAGTGGTCGCTTTTCCTTCGCCCAACGTCGTCCGAATCCGCCTGCCAGGCCAGCGGAAGGGACGACTTGCCAATATTGGAGACTTAAAAGCGTTTCAT-------TC-----------------------------TTCTT------------------	Size	Hit Count	Total Norm	Total
No Reads

droFic1

ATTAAGTGAAATCTTCGAGGTCGTCAGGCGGAATATGGAAAAGGCAGTGTAGGATCAGGCACGCCATAACAACCTGCGAAGGAGGCCATGGACCCCGAAGATTGGCGATAA----AGTCTGTACAAAGGAACACCACCTGTCCAGAGCGGTGGATGGCTTCGCTGCAAAATTGGCCTCCAGATATGACGGGCCATACACCATCACGAAATTTATTTCCCCGGTCGTTTGCAACTTGAGGCACAGCCTGAGTGGC-AAGGAAAACCGAATCATATTATTGAGCTAAAGCCG-------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droEle1

AATAAACGAAATCTTCGAGCTGGTC-------------AGAAGGCGGCGCAGGATCAGGCGCGCCACTACAATCTCCGGAGGCGCCCTTGAAAACCACAGATCGGAGACAC----GGTATGGGCCAAGGAGCACCATCTATCCAACGCGGCAGAAGGATTCGCGGCGAAACCGGCCCCCAGATACGAGAGACCGTTTAAAATAATTAATTTCGATTCTCCGGC-------------------------------AAAGAAAGGAAAACACACATAAACCAGTTAAAACCGCAAAGCAAAGAGGG-----GCAG-------------TCTCA--------------------------	Size	Hit Count	Total Norm	Total
No Reads

droRho1

G---------------------------------------------------GAACAAAGTCGCTATTACAACTTGCGCCGACGGGAATGGAGACCGACCATTGGGATGTA----GGTTTGGGTCCGAACTCACCACCTGTCCAACGCCGCGGAGGCGTTCAATGCCAAACTAGCTCCAAAGTTCGAAGGATCAT----------AAAATTTCTGTCACCAAACATCGCCAGAGTCCAACTTCGAGGGACACGCAAGCGTCGCAACGCAAATCTAGCCGATTTGAAACCCTTTCAT-------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droBia1

G-----------------------------------------------------------------------------------ACAATGGACACCAGCGGTGGGGGACGC----CGTGTGGGCCAAGGAACATCATTTGTCAAAGGCGGCCGAGGGGTTCGCAGCAAAGTTGGCCCCAAGATACGACGGGCCTTACCAGGTCATGGATTTTGCGTAACCAGTAATCTGCAAAATACGGCACACA------AAAAAAGAGAGGACCATCCACGTGAGCGAGCTGAAAC---------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droTak1

A----------------------------------------------------------------------ATCTCCGAAGGCGACCATGGAAGCCGAAGGTTGGGGACAA----GGTCTGGGTCAAGGAGCACCACCTGTCCAAGGCAGTAGAGGGCTTCGCGGCGAAATTGGCCCCAAAATTCGATGGGCCGTTTAAAATCACAAAGTTCACCTCGCCGGTGATCTGCAAGTTACGGCACGAGGAAAGCGGCAAGGAAAAAACAGCACACATTAGCGATCTTAAGCCCGGGAGT-------GA----------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

dm3

ATTGAAAGAAATCTTCGAGCTGGTGCGGAGGAATTTGGAGAAGGCGGCCCAGGATCAGGCACGCCACTATAATCTCCGAAGACGGCCGTGGAAACCCAAGGTGAGGGACCC----AGTATGGGCCAAAGAGCACAACCTGTCAAAGGCAGCCGAAGGTTTCGCAGCAAAATTGGCCCCGAGATTTGACGGGCCGTATAGGATAAAGAAATTCACGTCACCAGTAATATGCGTCCTGGAACACAAAACAACCAAGAAGGAAAAGACAGCACACATTAGCGATCTGAAGCCGGGAAGC-------GCGGGCGCCG--------------------------------------------	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
.........................................................................................................................................................................................................TAAAGAAATTCACGTCACCAGTAATA..................................................................................................................................	26	3	77.00	231	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	2	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	8	0	0	0	0	0	0	0	36	0	134	3	21	9	6	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
......................................................TCAGGCACGCCACTATAATCTCCGAA.....................................................................................................................................................................................................................................................................................	26	3	47.33	142	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	4	0	0	0	1	0	0	0	11	0	52	0	12	8	50	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................GCACACATTAGCGATCTGAAGCCG...................................................................	24	2	33.50	67	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	13	14	22	0	0	0	0	0	0
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....................................................................................................................................................................................................................................................................................GCGATCTGAAGCCGGGAAGC-------G.....................................................	21	5	1.60	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................TCACCAGTAATATGCGTCCTG.........................................................................................................................	21	5	1.60	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	3	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................TGAAGCCGGGAAGC-------GCGGGCGCC.............................................	23	5	1.60	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................AGTAATATGCGTCCTGGAAC.....................................................................................................................	20	5	1.60	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................AAAGACAGCACACATTAGCGATCTGA........................................................................	26	2	1.50	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSim2

G----------------------------------------------------ATCAGGCACGACACTATAATCTCAGAAGACGGCCGTGGAAACCCAAGGTGCGGGACAC----AGTATGGGCCAAAGAGCACCACCTGTCAAAGGCAGCCGAAGGTTTCGCGGCAAAATTGGCCCGAAGATTTGACGGGCCGTACACGATAAAGAAATTCACGGCACCAGTTATATGCGTCCTAGAACACAAAACGACCAAGAAAGAAAAGACTGCTCACATCAGTGATCTGAAGCCGGGAAGC-------GCGGGAGTTA-------------CATCA--------------------------	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
............................................................................................................CAC----AGTATGGGCCAAAGAGCACCACC...........................................................................................................................................................................................................................	26	7	999.29	6995	4	15	1096	222	80	0	5	7	0	0	5382	184	0	0	0	0	0
............................................................................................................CAC----AGTATGGGCCAAAGAGCACCAC............................................................................................................................................................................................................................	25	8	963.38	7707	1	0	164	36	16	8	5	0	0	0	7205	272	0	0	0	0	0
............................................................................................................CAC----AGTATGGGCCAAAGAGCACCA.............................................................................................................................................................................................................................	24	8	555.50	4444	0	0	9	33	0	0	1	0	2	0	4297	102	0	0	0	0	0
..............................................................GACACTATAATCTCAGAAGACGGC...............................................................................................................................................................................................................................................................................	24	5	153.20	766	0	0	0	0	0	0	333	193	202	38	0	0	0	0	0	0	0
...........................................................................CAGAAGACGGCCGTGGAAACCCAAG.................................................................................................................................................................................................................................................................	25	4	80.00	320	0	0	0	0	0	0	0	0	0	0	0	0	309	11	0	0	0
...........................................................................CAGAAGACGGCCGTGGAAACCCAA..................................................................................................................................................................................................................................................................	24	4	78.75	315	0	0	0	0	0	0	0	0	0	0	0	0	296	19	0	0	0
...................................................................................................................AGTATGGGCCAAAGAGCACCA.............................................................................................................................................................................................................................	21	8	68.75	550	0	0	0	0	0	0	0	0	0	0	550	0	0	0	0	0	0
...........................................................................................................................CCAAAGAGCACCACCTGTCAAAGG..................................................................................................................................................................................................................	24	7	56.29	394	0	0	0	0	0	0	8	350	0	36	0	0	0	0	0	0	0
...........................................................................CAGAAGACGGCCGTGGAAACCCAAGG................................................................................................................................................................................................................................................................	26	4	47.75	191	0	0	0	0	0	0	0	0	0	0	0	0	189	2	0	0	0
....................................................................................................................GTATGGGCCAAAGAGCACCA.............................................................................................................................................................................................................................	20	8	47.25	378	0	0	0	0	0	0	0	0	0	0	378	0	0	0	0	0	0
............................................................................................................CAC----AGTATGGGCCAAAGAGCACC..............................................................................................................................................................................................................................	23	8	43.38	347	0	0	36	14	24	16	2	0	0	0	230	25	0	0	0	0	0
......................................................................................................................................CACCTGTCAAAGGCAGCCGAAGG........................................................................................................................................................................................................	23	8	42.50	340	0	0	0	0	0	0	140	54	120	23	0	0	3	0	0	0	0
............................................................................................................CAC----AGTATGGGCCAAAGAGCAC...............................................................................................................................................................................................................................	22	8	38.63	309	3	4	64	3	24	0	1	0	2	0	206	2	0	0	0	0	0
.............................................................................................................AC----AGTATGGGCCAAAGAGCACCACC...........................................................................................................................................................................................................................	25	7	27.00	189	0	0	4	27	0	0	0	2	0	0	155	1	0	0	0	0	0
....................................................................................................................GTATGGGCCAAAGAGCACCAC............................................................................................................................................................................................................................	21	8	26.75	214	0	0	2	0	0	0	0	0	0	0	211	1	0	0	0	0	0
............................................................ACGACACTATAATCTCAGAAGACGGC...............................................................................................................................................................................................................................................................................	26	5	26.60	133	0	0	0	0	0	0	64	8	44	16	1	0	0	0	0	0	0
....................................................................................................................GTATGGGCCAAAGAGCACCACC...........................................................................................................................................................................................................................	22	7	24.00	168	0	0	2	0	0	0	0	0	0	0	166	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................GCTCACATCAGTGATCTGAAGCCGG..................................................................	25	1	23.00	23	0	0	0	0	0	0	12	9	1	1	0	0	0	0	0	0	0
.............................................................................................................AC----AGTATGGGCCAAAGAGCACCAC............................................................................................................................................................................................................................	24	8	21.00	168	0	0	0	2	0	0	0	0	0	0	165	1	0	0	0	0	0
...............................................................ACACTATAATCTCAGAAGACGG................................................................................................................................................................................................................................................................................	22	5	19.20	96	0	1	83	1	0	0	0	0	0	0	11	0	0	0	0	0	0
...........................................................................................................................CCAAAGAGCACCACCTGTCAAAG...................................................................................................................................................................................................................	23	7	17.43	122	0	0	0	0	0	0	0	76	5	41	0	0	0	0	0	0	0
...............................................................ACACTATAATCTCAGAAGACGGCC..............................................................................................................................................................................................................................................................................	24	5	17.20	86	0	4	49	7	0	0	0	0	0	0	26	0	0	0	0	0	0
............................................................................................................CAC----AGTATGGGCCAAAGAGCACCACCTG.........................................................................................................................................................................................................................	28	7	16.86	118	0	0	6	0	0	0	0	0	0	0	112	0	0	0	0	0	0
...................................................................................................................AGTATGGGCCAAAGAGCACCAC............................................................................................................................................................................................................................	22	8	13.75	110	0	0	0	0	0	0	0	0	0	0	110	0	0	0	0	0	0
...............................................................ACACTATAATCTCAGAAGACGGC...............................................................................................................................................................................................................................................................................	23	5	13.60	68	0	0	5	6	0	0	0	0	0	0	51	6	0	0	0	0	0
...........................................................................CAGAAGACGGCCGTGGAAACCCAAA.................................................................................................................................................................................................................................................................	25	4	13.50	54	0	0	0	0	0	0	0	0	0	0	0	0	52	2	0	0	0
............................................................................................................CAC----AGTATGGGCCAAAGA...................................................................................................................................................................................................................................	18	8	13.25	106	0	0	0	0	48	0	1	0	0	0	56	1	0	0	0	0	0
......................................................................................................................................CACCTGTCAAAGGCAGCCGAAGGT.......................................................................................................................................................................................................	24	7	13.14	92	0	0	0	0	0	0	34	10	29	7	5	0	7	0	0	0	0
...........................................................................................................................CCAAAGAGCACCACCTGTCAAAGGC.................................................................................................................................................................................................................	25	7	12.86	90	0	0	0	0	0	0	0	57	2	31	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................AAAAGACTGCTCACATCA.................................................................................	18	3	12.00	36	0	0	0	0	3	0	0	0	0	0	33	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................TGCTCACATCAGTGATCTGAAGCCGGGA................................................................	28	1	12.00	12	0	0	0	0	0	0	6	5	0	0	0	0	1	0	0	0	0
.............................................................................................................AC----AGTATGGGCCAAAGAGCACCA.............................................................................................................................................................................................................................	23	8	11.75	94	0	0	0	0	0	0	0	0	0	0	93	1	0	0	0	0	0
..........................................................................................................................................................................................................................................................................GCTCACATCAGTGATCTGAAGCCGGGA................................................................	27	1	10.00	10	0	0	0	0	0	0	1	7	1	0	0	0	1	0	0	0	0
............................................................................................................CAC----AGTATGGGCCAAAGAGC.................................................................................................................................................................................................................................	20	8	10.00	80	0	0	0	1	8	0	1	1	0	0	69	0	0	0	0	0	0
..............................................................GACACTATAATCTCAGAAGACGGCC..............................................................................................................................................................................................................................................................................	25	5	9.60	48	0	0	0	0	0	0	13	3	24	8	0	0	0	0	0	0	0
............................................................ACGACACTATAATCTCAGAAGACG.................................................................................................................................................................................................................................................................................	24	5	9.40	47	0	0	0	0	0	0	20	2	16	9	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................AAAAGACTGCTCACATCAGTGATC...........................................................................	24	1	9.00	9	0	0	0	0	0	0	0	0	0	0	9	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................TGAAGCCGGGAAGC-------GC....................................................	16	6	8.67	52	0	0	0	0	0	0	0	0	0	0	52	0	0	0	0	0	0
......................................................................................................................................................................................................................GGCACCAGTTATATGCGTCCTAGA.......................................................................................................................	24	2	8.50	17	0	0	0	0	0	0	7	6	4	0	0	0	0	0	0	0	0
......................................................................................................................................................................................TTTGACGGGCCGTACACGATA..........................................................................................................................................................	21	5	8.00	40	0	0	28	1	8	0	0	0	0	0	3	0	0	0	0	0	0
..........................................................................................................................................TGTCAAAGGCAGCCGAAGGTTTCGC..................................................................................................................................................................................................	25	5	8.00	40	0	0	0	4	0	0	0	0	0	0	33	3	0	0	0	0	0
..........................................................................................................................................................................................................................................................................GCTCACATCAGTGATCTGAAGCCGGG.................................................................	26	1	8.00	8	0	0	0	0	0	0	6	2	0	0	0	0	0	0	0	0	0
............................................................................................................CAC----AGTATGGGCCAAAGAG..................................................................................................................................................................................................................................	19	8	7.88	63	0	0	0	0	48	8	0	0	0	0	6	1	0	0	0	0	0
...................................................................................................................AGTATGGGCCAAAGAGCACCACC...........................................................................................................................................................................................................................	23	7	7.71	54	0	0	0	1	0	0	0	0	0	0	53	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................AAAAGACTGCTCACATC..................................................................................	17	3	7.33	22	0	0	0	0	0	0	0	0	0	0	22	0	0	0	0	0	0
........................................................................................................................GGGCCAAAGAGCACCACC...........................................................................................................................................................................................................................	18	8	7.13	57	0	0	0	0	0	0	0	0	0	0	57	0	0	0	0	0	0
.....................................................................................................TGCGGGACAC----AGTATGGGCCAAAGAG..................................................................................................................................................................................................................................	26	8	7.13	57	0	0	0	0	0	0	10	9	13	5	3	0	16	1	0	0	0
..........................................................................................................................GCCAAAGAGCACCACC...........................................................................................................................................................................................................................	16	8	7.00	56	0	0	0	0	0	0	0	0	0	0	56	0	0	0	0	0	0
.....................................................................................................TGCGGGACAC----AGTATGGGCCAAAGA...................................................................................................................................................................................................................................	25	8	6.13	49	0	0	0	0	0	0	3	6	7	1	6	0	25	1	0	0	0
..........................................................................................................................................................................................................................................................................................TGAAGCCGGGAAGC-------GCG...................................................	17	6	5.83	35	0	0	0	0	0	0	0	0	0	0	35	0	0	0	0	0	0
...........................................................................CAGAAGACGGCCGTGGAAACCCAAGA................................................................................................................................................................................................................................................................	26	4	5.50	22	0	0	0	0	0	0	0	0	0	0	0	0	21	1	0	0	0
..................................................................................................................................................................................................................................................................AAAAGACTGCTCACATCAG................................................................................	19	3	5.33	16	0	0	0	0	9	0	0	0	0	0	7	0	0	0	0	0	0
......................................................................................................................ATGGGCCAAAGAGCACCACC...........................................................................................................................................................................................................................	20	7	5.29	37	0	0	0	0	0	0	0	0	0	0	37	0	0	0	0	0	0
...........................................................................CAGAAGACGGCCGTGGAAACCCA...................................................................................................................................................................................................................................................................	23	4	5.25	21	0	0	0	0	0	0	0	0	0	0	0	0	20	1	0	0	0
.....................................................................................................TGCGGGACAC----AGTATGGGCCAA......................................................................................................................................................................................................................................	22	8	5.13	41	0	0	0	0	0	0	1	0	0	0	0	0	33	7	0	0	0
............................................................................................................CAC----AGTATGGGCCAAAGAGCA................................................................................................................................................................................................................................	21	8	4.88	39	0	0	0	3	0	0	0	0	0	0	35	1	0	0	0	0	0
.......................................................................................................................TGGGCCAAAGAGCACCACC...........................................................................................................................................................................................................................	19	8	4.88	39	0	0	0	0	0	0	0	0	0	0	39	0	0	0	0	0	0
.........................................................................................................................GGCCAAAGAGCACCACC...........................................................................................................................................................................................................................	17	8	4.63	37	0	0	0	0	0	0	0	0	0	0	37	0	0	0	0	0	0
...........................................................................................................ACAC----AGTATGGGCCAAAGAGCACCAC............................................................................................................................................................................................................................	26	8	4.50	36	0	0	0	0	0	0	0	0	0	0	35	1	0	0	0	0	0
............................................................................................................CAC----AGTATGGGCCAAAGAGCACCAT............................................................................................................................................................................................................................	25	8	4.50	36	0	0	0	0	0	0	0	0	0	0	35	1	0	0	0	0	0
..............................................................................................................................................................................................................AAATTCACGGCACCAGTTATATGCG..............................................................................................................................	25	2	4.50	9	0	0	0	3	0	0	0	0	0	0	6	0	0	0	0	0	0
..........................................................................................................................GCCAAAGAGCACCAC............................................................................................................................................................................................................................	15	9	4.44	40	0	0	0	0	0	0	0	0	0	0	40	0	0	0	0	0	0
.......................................................................................................................................................................................TTGACGGGCCGTACACGATA..........................................................................................................................................................	20	5	4.40	22	0	0	19	0	0	0	0	0	0	0	3	0	0	0	0	0	0
.....................................................................................................TGCGGGACAC----AGTATGGGCCAAAG....................................................................................................................................................................................................................................	24	8	4.38	35	0	0	0	0	0	0	1	0	0	0	5	0	29	0	0	0	0
...............................................................ACACTATAATCTCAGAAGACG.................................................................................................................................................................................................................................................................................	21	5	4.20	21	0	0	4	0	9	3	0	0	0	0	5	0	0	0	0	0	0
............................................................ACGACACTATAATCTCAGAAGACGG................................................................................................................................................................................................................................................................................	25	5	4.20	21	0	0	0	0	0	0	9	1	7	4	0	0	0	0	0	0	0
..............................................................................................................................................................................................................AAATTCACGGCACCAGTTATATGCGTC............................................................................................................................	27	2	4.00	8	0	0	0	3	0	0	0	0	0	0	5	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................TGCTCACATCAGTGATCTGAAGCCGG..................................................................	26	1	4.00	4	0	0	0	0	0	0	2	0	2	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................AGCCGGGAAGC-------GCGGGAGTTA-------------CATC...........................	25	1	4.00	4	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0
.....................................................................................................TGCGGGACAC----AGTATGGGCCAAAGAGC.................................................................................................................................................................................................................................	27	8	3.88	31	0	0	0	0	0	0	6	7	3	0	1	1	12	1	0	0	0
.....................................................................................................TGCGGGACAC----AGTATGGGCCAAA.....................................................................................................................................................................................................................................	23	8	3.88	31	0	0	0	0	0	0	2	0	0	0	1	0	25	3	0	0	0
..........................................................................................................................................................................................................................................................................................TGAAGCCGGGAAGC-------GCGG..................................................	18	6	3.50	21	0	0	0	1	0	0	0	0	0	0	20	0	0	0	0	0	0
............................................................................................................CAC----AGTATGGGCCAAAGAGCACCACCT..........................................................................................................................................................................................................................	27	7	3.29	23	0	0	9	1	0	0	0	0	0	0	13	0	0	0	0	0	0
........................................................................................................................................................................................TGACGGGCCGTACACGATAAAG.......................................................................................................................................................	22	5	3.20	16	0	0	1	4	0	0	1	0	0	0	5	2	3	0	0	0	0
....................................................................................................................................................................................................................................................AACGACCAAGAAAGAAAAGACTGCTCA......................................................................................	27	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0
....................................................................ATAATCTCAGAAGACGGC...............................................................................................................................................................................................................................................................................	18	7	3.00	21	0	0	0	0	0	0	0	0	0	0	21	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................AAAAGACTGCTCACATCAGTGATCT..........................................................................	25	1	3.00	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
..........................................................................................................................................TGTCAAAGGCAGCCGAAGGTTTCG...................................................................................................................................................................................................	24	5	3.00	15	0	0	0	1	0	0	0	0	0	0	14	0	0	0	0	0	0
...........................................................................CAGAAGACGGCCGTGGAAACCCAATA................................................................................................................................................................................................................................................................	26	4	3.00	12	0	0	0	0	0	0	0	0	0	0	0	0	12	0	0	0	0
..................................................................................................................................................................................................................................................................AAAAGACTGCTCACATCAGTGATCTGA........................................................................	27	1	3.00	3	0	0	0	1	0	0	0	0	0	0	2	0	0	0	0	0	0
...........................................................................CAGAAGACGGCCGTGGAAACCCAAT.................................................................................................................................................................................................................................................................	25	4	3.00	12	0	0	0	0	0	0	0	0	0	0	0	0	11	1	0	0	0
.......................................................................................................................TGGGCCAAAGAGCACCACCTGTCAAA....................................................................................................................................................................................................................	26	8	2.88	23	0	0	0	0	0	0	5	9	3	6	0	0	0	0	0	0	0
........................................................................................................................................................................................TGACGGGCCGTACACGATAA.........................................................................................................................................................	20	5	2.80	14	0	0	3	0	8	0	0	0	0	0	0	0	2	1	0	0	0
...........................................................................CAGAAGACGGCCGTGGAAACCCAAAA................................................................................................................................................................................................................................................................	26	4	2.75	11	0	0	0	0	0	0	0	0	0	0	0	0	11	0	0	0	0
..........................................................................................................GACAC----AGTATGGGCCAAAGAGCACCACC...........................................................................................................................................................................................................................	28	7	2.71	19	0	0	0	0	0	0	0	0	0	0	19	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................AAAAGACTGCTCACA....................................................................................	15	3	2.67	8	0	0	0	0	0	0	0	0	0	0	8	0	0	0	0	0	0
........................................................................................................................................................................................TGACGGGCCGTACACGAT...........................................................................................................................................................	18	5	2.60	13	0	0	0	0	8	0	0	0	0	0	5	0	0	0	0	0	0
............................................................................................................CAC----AGTATGGGCCAAAGAGCACCACT...........................................................................................................................................................................................................................	26	8	2.50	20	0	0	7	0	0	0	0	0	0	0	13	0	0	0	0	0	0
..........................................................................................................................................................................................................................................TAGAACACAAAACGACCAAGAAAG...................................................................................................	24	2	2.50	5	0	0	0	2	0	0	0	0	0	0	3	0	0	0	0	0	0
...........................................................................CAGAAGACGGCCGTGGAAACCCAAGAA...............................................................................................................................................................................................................................................................	27	4	2.50	10	0	0	0	0	0	0	0	0	0	0	0	0	8	2	0	0	0
.............................................................CGACACTATAATCTCAGAAGACGGC...............................................................................................................................................................................................................................................................................	25	5	2.40	12	0	0	0	0	0	0	1	6	1	3	1	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................TGAAGCCGGGAAGC-------G.....................................................	15	6	2.33	14	0	0	0	0	0	0	0	0	0	0	14	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................AAAAGACTGCTCACAT...................................................................................	16	3	2.33	7	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0
.....................................................................................................TGCGGGACAC----AGTATGGGCCAAAGAGCAC...............................................................................................................................................................................................................................	29	8	2.25	18	0	0	0	0	0	0	4	2	2	0	1	0	9	0	0	0	0
............................................................................................................CAC----AGTATGGGCCAAAGAGCACCG.............................................................................................................................................................................................................................	24	8	2.25	18	0	0	0	0	0	0	0	0	0	0	18	0	0	0	0	0	0
...........................................................................................................................CCAAAGAGCACCACCTGTCAAAGGCA................................................................................................................................................................................................................	26	7	2.14	15	0	0	0	0	0	0	0	8	2	5	0	0	0	0	0	0	0
..........................................................................................................................................TGTCAAAGGCAGCCGAAG.........................................................................................................................................................................................................	18	8	2.13	17	0	0	0	0	8	0	0	0	0	0	9	0	0	0	0	0	0
.......................................................................................................................................................................................TTGACGGGCCGTACACGATAAAG.......................................................................................................................................................	23	5	2.00	10	0	0	1	0	8	0	0	0	0	0	1	0	0	0	0	0	0
.........................................................................................................................................................................................................................ACCAGTTATATGCGTC............................................................................................................................	16	5	2.00	10	0	0	0	0	0	0	0	0	0	0	10	0	0	0	0	0	0
.................................................................................................................................................................................................................TTCACGGCACCAGTTATATGCGTC............................................................................................................................	24	2	2.00	4	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0
..............................................................................................................................................................................................................AAATTCACGGCACCAGTTATATGCGTCC...........................................................................................................................	28	2	2.00	4	0	0	0	3	0	0	0	0	0	0	1	0	0	0	0	0	0
..........................................................................................................................................TGTCAAAGGCAGCCGAAGG........................................................................................................................................................................................................	19	8	2.00	16	0	0	0	3	0	0	0	0	0	0	13	0	0	0	0	0	0
....................................................................................................................................................................................................................................................AACGACCAAGAAAGAAAAGACT...........................................................................................	22	2	2.00	4	0	0	0	0	0	0	0	1	2	0	0	0	1	0	0	0	0
...........................................................................CAGAAGACGGCCGTGGAAACCCAATT................................................................................................................................................................................................................................................................	26	4	2.00	8	0	0	0	0	0	0	0	0	0	0	0	0	8	0	0	0	0
..............................................................................................................................................................TTCGCGGCAAAATTGGCCCGAAGA...............................................................................................................................................................................	24	1	2.00	2	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................AAAAGACTGCTCACATCAGTGAT............................................................................	23	1	2.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
..............................................................GACACTATAATCTCAGAAGACGG................................................................................................................................................................................................................................................................................	23	5	2.00	10	0	0	0	0	0	0	5	1	3	1	0	0	0	0	0	0	0
.....................................................................TAATCTCAGAAGACGGCCGTGGAAACC.....................................................................................................................................................................................................................................................................	27	4	2.00	8	0	0	6	1	0	0	0	0	0	0	1	0	0	0	0	0	0
...................................................................................................................................................................................................................................................AAACGACCAAGAAAGAAAAGACTGC.........................................................................................	25	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0
..........................................................................................................................................TGTCAAAGGCAGCCGAAGGTTTCGCG.................................................................................................................................................................................................	26	5	2.00	10	0	0	0	1	0	0	0	0	0	0	8	1	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................TGAAGCCGGGAAGC-------GCGGGA................................................	20	2	2.00	4	0	0	0	0	2	0	0	0	0	0	2	0	0	0	0	0	0
............................................................................................................CAC----AGTATGGGCCAAAGAGCACCAA............................................................................................................................................................................................................................	25	8	2.00	16	0	0	0	1	0	0	0	0	0	0	14	1	0	0	0	0	0
....................................................................................................................................................AGCCGAAGGTTTCGCGGCA..............................................................................................................................................................................................	19	5	2.00	10	0	0	0	0	0	0	0	0	0	0	10	0	0	0	0	0	0
.........................................................................................................................................................................................GACGGGCCGTACACGATAAAG.......................................................................................................................................................	21	5	1.80	9	0	0	0	1	8	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................TGACGGGCCGTACACGATAAAGA......................................................................................................................................................	23	5	1.80	9	0	0	1	0	0	0	0	1	1	2	3	0	1	0	0	0	0
........................................................................................................................................................................................TGACGGGCCGTACACGATAAA........................................................................................................................................................	21	5	1.80	9	0	0	0	0	0	8	0	0	0	0	1	0	0	0	0	0	0
...............................................................ACACTATAATCTCAGAAGAC..................................................................................................................................................................................................................................................................................	20	5	1.80	9	0	0	0	0	6	3	0	0	0	0	0	0	0	0	0	0	0
..........................................................................TCAGAAGACGGCCGTGGAAACCCAAGG................................................................................................................................................................................................................................................................	27	4	1.75	7	0	0	0	0	0	0	0	0	0	0	0	0	6	1	0	0	0
...............................................................ACACTATAATCTCAGAAGACGGCCGT............................................................................................................................................................................................................................................................................	26	3	1.67	5	0	0	1	1	0	0	0	0	0	1	2	0	0	0	0	0	0
......................................................................................................................................CACCTGTCAAAGGCAGCCGAAGGTTT.....................................................................................................................................................................................................	26	5	1.60	8	0	0	0	0	0	0	2	0	0	0	0	0	6	0	0	0	0
...........................................................................CAGAAGACGGCCGTGGAAACCCAT..................................................................................................................................................................................................................................................................	24	5	1.60	8	0	0	0	0	0	0	0	0	0	0	0	0	6	2	0	0	0
...........................................................................................................ACAC----AGTATGGGCCAAAGAGCACCACC...........................................................................................................................................................................................................................	27	7	1.57	11	0	0	1	0	0	0	0	0	0	0	10	0	0	0	0	0	0
....................................................................ATAATCTCAGAAGACGGCC..............................................................................................................................................................................................................................................................................	19	7	1.57	11	0	0	0	0	0	0	0	0	0	0	11	0	0	0	0	0	0
...........................................................................................................................CCAAAGAGCACCACCTGTCAAA....................................................................................................................................................................................................................	22	8	1.50	12	0	0	0	0	0	0	0	8	0	4	0	0	0	0	0	0	0
.................................................................................................................................................................................................................TTCACGGCACCAGTTATATGCGTA............................................................................................................................	24	2	1.50	3	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0
..........................................................................................................................................................................................................................................................................................TGAAGCCGGGAAGC-------GCGGGAGTT.............................................	23	2	1.50	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
.............................................................................................ACCCAAGGTGCGGGACAC----AGTATGGGC.........................................................................................................................................................................................................................................	27	6	1.50	9	0	0	0	0	0	0	0	0	0	0	9	0	0	0	0	0	0
........................................................................................................GGGACAC----AGTATGGGCCAAAGAGCACC..............................................................................................................................................................................................................................	27	8	1.50	12	0	0	0	0	0	0	1	2	0	0	5	1	3	0	0	0	0
..........................................................................................................................................................................................................................................TAGAACACAAAACGACCAAGAAAGT..................................................................................................	25	2	1.50	3	0	0	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................TGAAGCCGGGAAGC-------GCGGGAG...............................................	21	2	1.50	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
..........................................................................................................................................................................................................................................TAGAACACAAAACGACCAAGAAAGAAAA...............................................................................................	28	2	1.50	3	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0
..........................................................................................................................................................................................................................................................................................TGAAGCCGGGAAGC-------GCGGGAGTTA-------------C..............................	25	2	1.50	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
..............................................................................................................................................................................................................AAATTCACGGCACCAGT......................................................................................................................................	17	2	1.50	3	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
..........................................................................................................................................................................................................................................TAGAACACAAAACGACCAAGAAAGA..................................................................................................	25	2	1.50	3	0	0	2	0	0	0	0	0	0	0	0	0	1	0	0	0	0
..........................................................................................................................................................................................................................................TAGAACACAAAACGACCAAGAAAGAAA................................................................................................	27	2	1.50	3	0	0	0	1	0	0	0	0	0	0	0	0	2	0	0	0	0
..............................................................................................................C----AGTATGGGCCAAAGAGCACCA.............................................................................................................................................................................................................................	22	8	1.50	12	0	0	0	0	0	0	0	0	0	0	12	0	0	0	0	0	0
.............................................................................................................AC----AGTATGGGCCAAAGAGCACC..............................................................................................................................................................................................................................	22	8	1.50	12	0	0	0	1	0	0	0	0	0	0	11	0	0	0	0	0	0
....................................................................................................................................................AGCCGAAGGTTTCGCG.................................................................................................................................................................................................	16	5	1.40	7	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0
.............................................................................................................AC----AGTATGGGCCAAAGAGCAC...............................................................................................................................................................................................................................	21	8	1.38	11	0	0	0	0	0	0	0	0	0	0	10	1	0	0	0	0	0
.......................................................................................................CGGGACAC----AGTATGGGCCAAAGAGCAC...............................................................................................................................................................................................................................	27	8	1.38	11	0	0	0	0	0	0	4	4	2	0	1	0	0	0	0	0	0
.....................................................................................................TGCGGGACAC----AGTATGGGCCAAAGAGCA................................................................................................................................................................................................................................	28	8	1.38	11	0	0	0	0	0	0	2	1	0	0	0	0	8	0	0	0	0
....................................................................................................................GTATGGGCCAAAGAGCACC..............................................................................................................................................................................................................................	19	8	1.38	11	0	0	0	0	0	0	0	0	0	0	11	0	0	0	0	0	0
..............................................................GACACTATAATCTCAGAAGACGGCCGT............................................................................................................................................................................................................................................................................	27	3	1.33	4	0	0	0	0	0	0	1	3	0	0	0	0	0	0	0	0	0
....................................................................................................................................ACCACCTGTCAAAGGCAGCCGAAGGT.......................................................................................................................................................................................................	26	7	1.29	9	0	0	0	0	0	0	1	1	0	1	6	0	0	0	0	0	0
....................................................................................................................GTATGGGCCAAAGAGCACCACCTG.........................................................................................................................................................................................................................	24	7	1.29	9	0	0	0	0	0	0	0	0	0	0	9	0	0	0	0	0	0
.....................................................................................................TGCGGGACAC----AGTATGGGCCAAAGAA..................................................................................................................................................................................................................................	26	8	1.25	10	0	0	0	0	0	0	2	3	3	0	0	0	2	0	0	0	0
.....................................................................................................TGCGGGACAC----AGTATGGGCCAAAGAGCAT...............................................................................................................................................................................................................................	29	8	1.25	10	0	0	0	0	0	0	0	1	0	0	0	0	9	0	0	0	0
...........................................................................CAGAAGACGGCCGTGGAAACCCAAAAA...............................................................................................................................................................................................................................................................	27	4	1.25	5	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0
.......................................................................................................CGGGACAC----AGTATGGGCCAAAGAGCACC..............................................................................................................................................................................................................................	28	8	1.25	10	0	0	2	0	0	0	0	7	1	0	0	0	0	0	0	0	0
........................................................................TCTCAGAAGACGGCCGTGGAAACCCA...................................................................................................................................................................................................................................................................	26	4	1.25	5	0	0	0	0	0	0	0	3	1	1	0	0	0	0	0	0	0
..........................................................................................................................GCCAAAGAGCACCACCTG.........................................................................................................................................................................................................................	18	8	1.25	10	0	0	0	0	0	0	0	0	0	0	10	0	0	0	0	0	0
...................................................................................................GGTGCGGGACAC----AGTATGGGCCAAAG....................................................................................................................................................................................................................................	26	8	1.25	10	0	0	0	0	0	0	0	0	0	0	1	0	9	0	0	0	0
.........................................................................................................................GGCCAAAGAGCACCAC............................................................................................................................................................................................................................	16	9	1.22	11	0	0	0	0	0	0	0	0	0	0	11	0	0	0	0	0	0
........................................................................................................................................................................................TGACGGGCCGTACACGATAAAGAAAT...................................................................................................................................................	26	5	1.20	6	0	0	4	0	0	0	0	1	0	0	0	0	1	0	0	0	0
....................................................................................................................................................AGCCGAAGGTTTCGCGGC...............................................................................................................................................................................................	18	5	1.20	6	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0
..............................................................GACACTATAATCTCAGAAGACGGCCT.............................................................................................................................................................................................................................................................................	26	5	1.20	6	0	0	0	0	0	0	4	1	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................ACCAGTTATATGCGTCC...........................................................................................................................	17	5	1.20	6	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................TGAAGCCGGGAAGC-------GCGGG.................................................	19	5	1.20	6	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0
...........................................................CACGACACTATAATCTCAGAAGACGGC...............................................................................................................................................................................................................................................................................	27	5	1.20	6	0	0	0	0	0	0	0	0	1	4	1	0	0	0	0	0	0
......................................................................................................................................................................................TTTGACGGGCCGTACACGAT...........................................................................................................................................................	20	5	1.20	6	0	0	0	1	0	0	0	0	0	0	5	0	0	0	0	0	0
............................................................................................................CAC----AGTATGGGCCAAAGAGCACCACCTGT........................................................................................................................................................................................................................	29	7	1.14	8	0	0	0	0	0	0	0	0	0	0	8	0	0	0	0	0	0
.....................................................................................................................TATGGGCCAAAGAGCACCACC...........................................................................................................................................................................................................................	21	7	1.14	8	0	1	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0
.........................................................................................................................................................AAGGTTTCGCGGCAAAA...........................................................................................................................................................................................	17	7	1.14	8	0	0	0	0	0	0	0	0	0	0	8	0	0	0	0	0	0
............................................................................................................CAC----AGTATGGGCCAAA.....................................................................................................................................................................................................................................	16	8	1.13	9	0	0	0	0	0	0	0	0	0	0	9	0	0	0	0	0	0
..............................................................................................................C----AGTATGGGCCAAAGAGCACCAC............................................................................................................................................................................................................................	23	8	1.13	9	0	0	0	0	0	0	0	0	0	0	9	0	0	0	0	0	0
................................................................................................................................................................................................................................................ACAAAACGACCAAGAAAGAAAAGA.............................................................................................	24	3	1.00	3	0	0	0	0	0	0	1	0	0	0	0	0	2	0	0	0	0
.......................................................................................................................................................................................TTGACGGGCCGTACACGAT...........................................................................................................................................................	19	5	1.00	5	0	0	1	0	0	0	0	0	0	0	4	0	0	0	0	0	0
......................................................TCAGGCACGACACTATAATCTCAGAAGA...................................................................................................................................................................................................................................................................................	28	4	1.00	4	0	0	0	1	0	0	0	2	1	0	0	0	0	0	0	0	0
.....................................................................TAATCTCAGAAGACGGCCGTGGAAACCC....................................................................................................................................................................................................................................................................	28	4	1.00	4	0	0	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................TAGAACACAAAACGACCAAGAAAA...................................................................................................	24	2	1.00	2	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0
..........................................................................................................................................................................................................................................TAGAACACAAAACGACCAAGAA.....................................................................................................	22	2	1.00	2	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0
..........................................................................................................................................................................................................................................TAGAACACAAAACGACCAAGAAA....................................................................................................	23	2	1.00	2	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0
......................................................................................................................................CACCTGTCAAAGGCAGCCGAAGGTT......................................................................................................................................................................................................	25	7	1.00	7	0	0	0	0	0	0	1	1	1	0	1	0	3	0	0	0	0
......................................................................................................................................................................AAAATTGGCCCGAAGATTTGACGG.......................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................GCACCAGTTATATGCGTCCTAGAA......................................................................................................................	24	2	1.00	2	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................GCACCAGTTATATGCGTCCTAGAACA....................................................................................................................	26	2	1.00	2	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................TTCACGGCACCAGTTATATGCGTCC...........................................................................................................................	25	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0
.............................................................................................................................................CAAAGGCAGCCGAAGGTTTCGCGGC...............................................................................................................................................................................................	25	5	1.00	5	0	0	1	0	0	0	0	0	0	0	4	0	0	0	0	0	0
...............................................................ACACTATAATCTCAGAAGACGGCCG.............................................................................................................................................................................................................................................................................	25	3	1.00	3	0	0	0	1	0	0	0	0	0	0	2	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................TGAAGCCGGGAAGC-------GCGGGAGT..............................................	22	2	1.00	2	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0
......................................................................................................................................................................................................................GGCACCAGTTATATGCGTCCTAGAACACA..................................................................................................................	29	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0
..........................................................................................................................................................................................................................................................................GCTCACATCAGTGATCTGAAGCCG...................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
..............................................................................................................................................................................................................AAATTCACGGCACCAGTTATATGCGT.............................................................................................................................	26	2	1.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
...................................................................TATAATCTCAGAAGACGGCCGTGGAAA.......................................................................................................................................................................................................................................................................	27	4	1.00	4	0	0	0	0	0	0	2	0	0	0	0	0	2	0	0	0	0
..........................................................................................................................................TGTCAAAGGCAGCCGAAGGTTTCGCGG................................................................................................................................................................................................	27	5	1.00	5	0	0	0	1	0	0	0	0	0	0	4	0	0	0	0	0	0
..............................................................................................................................................AAAGGCAGCCGAAGGTTTCGCGGCAA.............................................................................................................................................................................................	26	5	1.00	5	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0
........................................................................................................................................................................................TGACGGGCCGTACACGATAAAGAAA....................................................................................................................................................	25	5	1.00	5	0	0	1	0	0	0	0	1	0	1	2	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................TCTGAAGCCGGGAAGC-------GCGGGAG...............................................	23	2	1.00	2	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................GACTGCTCACATCAGTGATCTGAAGC.....................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................AAGACTGCTCACATCAGTG..............................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
..............................................................GACACTATAATCTCAGAAGACGGCT..............................................................................................................................................................................................................................................................................	25	5	1.00	5	0	0	0	0	0	0	1	2	2	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................TGCTCACATCAGTGATCTGAAGCCGGG.................................................................	27	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................TCAGTGATCTGAAGCCGGGAAGC-------GCG...................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
........................................................................................................................................................................................TGACGGGCCGTACACGATAAAA.......................................................................................................................................................	22	5	1.00	5	0	0	1	0	0	0	0	0	0	0	1	1	2	0	0	0	0
....................................................................................................................................................................................GATTTGACGGGCCGTACA...............................................................................................................................................................	18	2	1.00	2	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................TTTGACGGGCCGTACACGATAAAG.......................................................................................................................................................	24	5	1.00	5	0	1	0	1	0	0	0	0	0	0	2	0	0	1	0	0	0
..................................................................................................................................................................................................................................................................AAAAGACTGCTCACATCAGT...............................................................................	20	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................TAGAACACAAAACGACCA.........................................................................................................	18	3	1.00	3	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................TGGGCCAAAGAGCACCACCTGTCAAAGGC.................................................................................................................................................................................................................	29	7	1.00	7	0	0	0	0	0	0	0	1	1	2	3	0	0	0	0	0	0
..........................................................................TCAGAAGACGGCCGT............................................................................................................................................................................................................................................................................	15	7	1.00	7	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0
.............................................................................................................................................................TTTCGCGGCAAAATTGGCCCGAAGATT.............................................................................................................................................................................	27	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................CTAGAACACAAAACGACCAAGAAAGT..................................................................................................	26	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0
...........................................................................................................ACAC----AGTATGGGCCAAAGAGCACCA.............................................................................................................................................................................................................................	25	8	1.00	8	0	0	0	0	0	0	0	0	0	0	8	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................TGAAGCCGGGAAGC-------GCGGGAGTTA-------------A..............................	25	2	1.00	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
.....................................................................................................TGCGGGACAC----AGTATGGGCCAAAGAGCACC..............................................................................................................................................................................................................................	30	8	1.00	8	0	0	0	0	0	0	3	4	0	1	0	0	0	0	0	0	0
...........................................................................CAGAAGACGGCCGTGGAAACCCAAGGTG..............................................................................................................................................................................................................................................................	28	4	1.00	4	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0
..........................................................................................................GACAC----AGTATGGGCCAAAGAGCACCA.............................................................................................................................................................................................................................	26	8	0.88	7	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0
..............................................................................................................C----AGTATGGGCCAAAGAGCACCACC...........................................................................................................................................................................................................................	24	7	0.86	6	0	0	0	1	0	0	0	0	0	0	5	0	0	0	0	0	0
........................................................................................................................................................GAAGGTTTCGCGGCAA.............................................................................................................................................................................................	16	7	0.86	6	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0
.........................................................................CTCAGAAGACGGCCGT............................................................................................................................................................................................................................................................................	16	7	0.86	6	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0
..............................................................................................................................................AAAGGCAGCCGAAGGTTTCGCGGC...............................................................................................................................................................................................	24	5	0.80	4	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0
......................................................................................................................................................................................TTTGACGGGCCGTACACGATAAAGAAA....................................................................................................................................................	27	5	0.80	4	0	1	0	0	0	0	0	1	0	0	0	0	2	0	0	0	0
......................................................................................................................................................................................TTTGACGGGCCGTACACGATAAAGA......................................................................................................................................................	25	5	0.80	4	0	0	0	0	0	0	0	1	1	0	1	0	1	0	0	0	0
............................................................................................AACCCAAGGTGCGGGACAC----AGTATGGG..........................................................................................................................................................................................................................................	27	5	0.80	4	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0
......................................................................................................................................................................................TTTGACGGGCCGTACACGATAAAGAA.....................................................................................................................................................	26	5	0.80	4	0	0	0	0	0	0	0	2	0	0	0	0	2	0	0	0	0
........................................................................................................................................................................................TGACGGGCCGTACACGATAAAGAA.....................................................................................................................................................	24	5	0.80	4	0	0	0	0	0	0	0	0	0	1	0	0	3	0	0	0	0
.............................................................CGACACTATAATCTCAGAAGACGG................................................................................................................................................................................................................................................................................	24	5	0.80	4	0	0	2	0	0	0	0	0	0	1	1	0	0	0	0	0	0
....................................................................................................................................................AGCCGAAGGTTTCGCGGCAAAATTG........................................................................................................................................................................................	25	5	0.80	4	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0
.......................................................................................................................................................................................TTGACGGGCCGTACACGATAAA........................................................................................................................................................	22	5	0.80	4	0	0	1	0	0	0	0	0	0	0	2	0	1	0	0	0	0
...........................................................................................................................................................................................CGGGCCGTACACGATAAAGAAA....................................................................................................................................................	22	5	0.80	4	0	0	0	0	0	0	2	0	0	0	0	0	2	0	0	0	0
.......................................................................................................................................................................................TTGACGGGCCGTACACGATAAAGAA.....................................................................................................................................................	25	5	0.80	4	0	0	0	0	0	0	1	0	0	0	1	0	2	0	0	0	0
....................................................................................................................GTATGGGCCAAAGAGCAC...............................................................................................................................................................................................................................	18	9	0.78	7	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0
......................................................................................................................ATGGGCCAAAGAGCACCAC............................................................................................................................................................................................................................	19	8	0.75	6	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0
.....................................................................TAATCTCAGAAGACGGCCGTGGAAACCCA...................................................................................................................................................................................................................................................................	29	4	0.75	3	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0
...........................................................................CAGAAGACGGCCGTGGAAACCCAAGT................................................................................................................................................................................................................................................................	26	4	0.75	3	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0
......................................................................................................................ATGGGCCAAAGAGCACC..............................................................................................................................................................................................................................	17	8	0.75	6	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0
...................................................................TATAATCTCAGAAGACGGCCGTGGA.........................................................................................................................................................................................................................................................................	25	4	0.75	3	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0

droSec2

GGTGCG---------------------GAGGAATATGGAGAAGGCGGCACAGGATCAGGCACGGCACTACAACCTCAGAAGACGGCCGTGGAAACCCAAGGTGCGGGAAAC----AGTATGGGCCAAAGAGCACCACCTGTCAAAGGCAGCCGAAGGTTTCGCGGCAAAATTAGCCCCAAGATTTGACGGGCCGTACACGATAAAGAAATTCACGTCACCAGTTATATGCGTCCTAGAACACAAGACGACTAAGAAAGAAAAGACCGCGCACATCAGCGATCTGAAGCCGGGAAGC-------GCGGACGCCGACGGGCCAGGAGATTTCGAATTTTAATTTAAAAAAAA---ATAA	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
............................................................................................................AAC----AGTATGGGCCAAAGAGCACCAC............................................................................................................................................................................................................................	25	5	41.80	209	8	9	167	25
.................................................................................................................................................................................................................TTCACGTCACCAGTTATATGCGTCC...........................................................................................................................	25	20	38.85	777	627	2	132	16
............................................................................................................AAC----AGTATGGGCCAAAGAGCACCA.............................................................................................................................................................................................................................	24	5	36.60	183	13	2	152	16
..................................................................................................................................................................................................................................................................AAAAGACCGCGCACATCAGCGAT............................................................................	23	9	18.44	166	6	1	138	21
...............................................CACAGGATCAGGCACGGCACTACAACC...........................................................................................................................................................................................................................................................................................	27	20	15.75	315	224	4	64	23
.................................................................................................................................................................................................................TTCACGTCACCAGTTATATGCGTC............................................................................................................................	24	20	14.55	291	227	2	62	0
..................................................................................................................................................................................................................................................................AAAAGACCGCGCACATCAGCGATC...........................................................................	24	9	14.11	127	54	1	70	2
.......................................................................................................................................................CGAAGGTTTCGCGGCAAAATTAGCCCC...................................................................................................................................................................................	27	9	13.22	119	81	2	29	7
.......................................................................................................................................................CGAAGGTTTCGCGGCAAAATTAGC......................................................................................................................................................................................	24	9	12.89	116	92	4	16	4
...............................................CACAGGATCAGGCACGGCACTAC...............................................................................................................................................................................................................................................................................................	23	20	10.85	217	77	0	140	0
.................................................................................................................................................................................................................TTCACGTCACCAGTTATATGCGTCCTA.........................................................................................................................	27	20	10.50	210	157	0	48	5
...............................................CACAGGATCAGGCACGGCACTACA..............................................................................................................................................................................................................................................................................................	24	20	9.45	189	141	2	42	4
..........................................................................................................................................................................................................................................................TAAGAAAGAAAAGACCGCGCACATC..................................................................................	25	9	9.22	83	47	1	34	1
.......................................................................................................................................................CGAAGGTTTCGCGGCAAAATTAGCCC....................................................................................................................................................................................	26	9	6.89	62	52	0	10	0
...............................................CACAGGATCAGGCACGGCACTACAA.............................................................................................................................................................................................................................................................................................	25	20	6.50	130	108	0	20	2
.......................................................................................................................................................CGAAGGTTTCGCGGCAAAATTAGCC.....................................................................................................................................................................................	25	9	5.78	52	47	0	5	0
............................................................................................................AAC----AGTATGGGCCAAAGAGCACCACC...........................................................................................................................................................................................................................	26	5	5.60	28	1	0	18	9
...............................................CACAGGATCAGGCACGGCACTACAAC............................................................................................................................................................................................................................................................................................	26	20	5.55	111	89	3	0	19
..........................................................................................................................................................................................................................................................TAAGAAAGAAAAGACCGCGCACA....................................................................................	23	9	5.22	47	17	2	28	0
............................................................................................................AAC----AGTATGGGCCAAAGAGCACC..............................................................................................................................................................................................................................	23	5	5.20	26	8	1	12	5
...............................................CACAGGATCAGGCACGGCACTACAACCT..........................................................................................................................................................................................................................................................................................	28	20	3.85	77	63	0	14	0
.............................................................................................................AC----AGTATGGGCCAAAGAGCACCA.............................................................................................................................................................................................................................	23	14	3.14	44	14	1	29	0
...............................................CACAGGATCAGGCACGGCACTA................................................................................................................................................................................................................................................................................................	22	20	3.05	61	0	0	57	4
..........................................................................................................................................................................................................................................................TAAGAAAGAAAAGACCGCGCACAT...................................................................................	24	9	2.78	25	8	1	16	0
.......................................................................................................................................................CGAAGGTTTCGCGGCAAAATTAGCCCCA..................................................................................................................................................................................	28	8	2.38	19	14	0	5	0
...............................................CACAGGATCAGGCACGGCACTACAACCTC.........................................................................................................................................................................................................................................................................................	29	20	2.30	46	46	0	0	0
..........................................................................................................................................................................................................................................................................................TGAAGCCGGGAAGC-------GCGGACGCCGA...........................................	25	20	2.15	43	40	0	3	0
.............................................................................................................AC----AGTATGGGCCAAAGAGCACCAC............................................................................................................................................................................................................................	24	14	2.07	29	5	0	20	4
......................................................................................................................................................................................TTTGACGGGCCGTACACGATAAAGAA.....................................................................................................................................................	26	20	2.00	40	13	1	22	4
..................................................................................................................................................................................................................TCACGTCACCAGTTATATGCGTCC...........................................................................................................................	24	20	1.80	36	36	0	0	0
..........................................................................................................................................................................................................................................TAGAACACAAGACGACTAAGAAAG...................................................................................................	24	8	1.63	13	13	0	0	0
..........................................................................TCAGAAGACGGCCGTGGAAACCCAAGG................................................................................................................................................................................................................................................................	27	11	1.55	17	15	0	1	1
................................................ACAGGATCAGGCACGGCACTACAACC...........................................................................................................................................................................................................................................................................................	26	20	1.50	30	29	0	1	0
..........................................................................................................................................................................................................................................................TAAGAAAGAAAAGACCGCGCACATCA.................................................................................	26	9	1.44	13	5	0	8	0
...................................................................TACAACCTCAGAAGACGGCCGTGGA.........................................................................................................................................................................................................................................................................	25	10	1.40	14	13	0	1	0
..........................................................................................................................................................................................................................................TAGAACACAAGACGACTAAGA......................................................................................................	21	8	1.25	10	8	0	2	0
..........................................................................................................................................................................................................................................TAGAACACAAGACGACTAAGAAA....................................................................................................	23	8	1.25	10	9	0	1	0
.......................................................................................................................................................CGAAGGTTTCGCGGCAAAATTAG.......................................................................................................................................................................................	23	9	1.22	11	6	1	4	0
............................................................................................................AAC----AGTATGGGCCAAAGAGCAC...............................................................................................................................................................................................................................	22	5	1.20	6	1	0	4	1
.............................................................CGGCACTACAACCTCAGAAGACGGC...............................................................................................................................................................................................................................................................................	25	20	1.15	23	11	0	12	0
.............................................................................................................AC----AGTATGGGCCAAAGAGCACCACC...........................................................................................................................................................................................................................	25	14	1.14	16	9	0	7	0
..........................................................................................................................................................................................................................................................TAAGAAAGAAAAGACCGCGCACATCAG................................................................................	27	9	1.11	10	7	0	3	0
.................................................................................................................................................................................................................TTCACGTCACCAGTTATATGCGTCCT..........................................................................................................................	26	20	1.05	21	0	0	21	0
........................................................................................................................................................GAAGGTTTCGCGGCAAAATTAGCCCC...................................................................................................................................................................................	26	9	1.00	9	9	0	0	0
......................................................................................................................................................................................TTTGACGGGCCGTACACGATAAAGA......................................................................................................................................................	25	20	0.95	19	16	0	0	3
..........................................................................................................................................................................................................................................................TAAGAAAGAAAAGACCGCGCACATCAGC...............................................................................	28	9	0.89	8	6	0	1	1
...................................................................................................................................................................................................................................................................AAAGACCGCGCACATCAGCGATC...........................................................................	23	9	0.89	8	7	0	1	0
............................................................................................................AAC----AGTATGGGCCAAAGAGCA................................................................................................................................................................................................................................	21	5	0.80	4	1	1	2	0
................................................ACAGGATCAGGCACGGCACTACA..............................................................................................................................................................................................................................................................................................	23	20	0.80	16	16	0	0	0
........................................................................................................................................................GAAGGTTTCGCGGCAAAATTAGC......................................................................................................................................................................................	23	9	0.78	7	7	0	0	0
.......................................................................................................................................................CGAAGGTTTCGCGGCAAAATTAGCCCCAA.................................................................................................................................................................................	29	8	0.75	6	3	1	2	0
..........................................................................................................................................................................................................................................TAGAACACAAGACGACTAAGAA.....................................................................................................	22	8	0.75	6	2	0	4	0
............................................................................AGAAGACGGCCGTGGAAACCCAAGG................................................................................................................................................................................................................................................................	25	11	0.73	8	4	0	4	0
........................................................................................................................................................................................................................................................................................TCTGAAGCCGGGAAGC-------GCGGACGCCGA...........................................	27	20	0.70	14	14	0	0	0
........................................................................................................................................................GAAGGTTTCGCGGCAAAATTAGCCC....................................................................................................................................................................................	25	9	0.67	6	6	0	0	0
........................................................................................................................................................GAAGGTTTCGCGGCAAAATTAGCC.....................................................................................................................................................................................	24	9	0.67	6	6	0	0	0
..........................................................................................................................................................................................................................................TAGAACACAAGACGACTAAG.......................................................................................................	20	8	0.63	5	5	0	0	0
..........................................................................................................................................................................................................................................TAGAACACAAGACGACTAAGAAAGA..................................................................................................	25	8	0.63	5	4	0	0	1
..........................................................................................................................................................................................................................................TAGAACACAAGACGACTAAGAAAGT..................................................................................................	25	8	0.63	5	2	1	2	0
.........................................................................................................................................................AAGGTTTCGCGGCAAAATTAGCCCC...................................................................................................................................................................................	25	9	0.56	5	5	0	0	0
..........................................................................................................................................................................................................................................................TAAGAAAGAAAAGACCGCGCAC.....................................................................................	22	9	0.56	5	1	0	4	0
................................................ACAGGATCAGGCACGGCACTAC...............................................................................................................................................................................................................................................................................................	22	20	0.55	11	11	0	0	0
............................................................ACGGCACTACAACCTCAGAAGACGGC...............................................................................................................................................................................................................................................................................	26	20	0.50	10	3	0	6	1
...............................................................................................................................................................................................................AATTCACGTCACCAGTTATATGCGTC............................................................................................................................	26	20	0.50	10	10	0	0	0
................................................ACAGGATCAGGCACGGCACTACAACCT..........................................................................................................................................................................................................................................................................................	27	20	0.45	9	9	0	0	0
..................................................................................................................................................................................................................................................................AAAAGACCGCGCACATCAGCG..............................................................................	21	9	0.44	4	0	0	4	0
..........................................................................................................................................................................................................................................................TAAGAAAGAAAAGACCGCGCA......................................................................................	21	9	0.44	4	2	0	2	0
...................................................................................................................................................................................................................................................................................AGCGATCTGAAGCCGGGAAGC-------GCGGA.................................................	26	20	0.40	8	0	0	8	0
..........................................................................................................................................................................................................................................................................................TGAAGCCGGGAAGC-------GCGGACGC..............................................	22	20	0.40	8	2	0	6	0
......................................................................................................................................................................................TTTGACGGGCCGTACACGATAAA........................................................................................................................................................	23	20	0.40	8	4	0	4	0
.....................................................................................................TGCGGGAAAC----AGTATGGGCCAAAGAGC.................................................................................................................................................................................................................................	27	5	0.40	2	0	0	2	0
..................................................................................................................................................................................................................................................................AAAAGACCGCGCACATCAGCGATCTG.........................................................................	26	8	0.38	3	0	0	3	0
.........................................................................................................................................................AAGGTTTCGCGGCAAAATTAGCCCCA..................................................................................................................................................................................	26	8	0.38	3	3	0	0	0
..................................................................................................................................................................................................................................................................AAAAGACCGCGCACATCAGCGA.............................................................................	22	9	0.33	3	2	0	1	0
...................................................................................................................................................................................................................................................................AAAGACCGCGCACATCAGCGAT............................................................................	22	9	0.33	3	0	0	3	0
.............................................................................................................AC----AGTATGGGCCAAAGAGCAC...............................................................................................................................................................................................................................	21	20	0.30	6	6	0	0	0
................................................................................................................................................................................................................................................................................................CGGGAAGC-------GCGGACGCCGACGGGC......................................	24	20	0.30	6	1	0	5	0
.......................................................................................................................................................................................TTGACGGGCCGTACACGATAAAG.......................................................................................................................................................	23	20	0.30	6	5	0	1	0
..........................................................................................................................................................................................................................................................................................TGAAGCCGGGAAGC-------GCGGACGCCGACG.........................................	27	20	0.30	6	3	0	2	1
........................................................................................................................................................................................TGACGGGCCGTACACGATAAAGAAA....................................................................................................................................................	25	20	0.30	6	1	0	5	0
................................................ACAGGATCAGGCACGGCACTA................................................................................................................................................................................................................................................................................................	21	20	0.30	6	6	0	0	0
..............................................................................................................C----AGTATGGGCCAAAGAGCACCA.............................................................................................................................................................................................................................	22	14	0.29	4	1	0	3	0
..............................................................................................................C----AGTATGGGCCAAAGAGCACC..............................................................................................................................................................................................................................	21	20	0.25	5	3	0	2	0
............................................................................................................................................................................................................................................GAACACAAGACGACTAAGAAAG...................................................................................................	22	8	0.25	2	1	0	1	0
................................................ACAGGATCAGGCACGGCACTACAACCTC.........................................................................................................................................................................................................................................................................................	28	20	0.25	5	5	0	0	0
.............................................................................................................................................................................................................................................................................................AGCCGGGAAGC-------GCGGACGCCGACGG........................................	25	20	0.25	5	0	0	3	2
..........................................................................................................................................................................................................................................TAGAACACAAGACGACTAAGAAAGTTT................................................................................................	27	8	0.25	2	1	0	1	0
...............................................CACAGGATCAGGCACGGCACT.................................................................................................................................................................................................................................................................................................	21	20	0.25	5	0	0	5	0
........................................................................................................................................................................................TGACGGGCCGTACACGATAAAGA......................................................................................................................................................	23	20	0.25	5	3	0	2	0
.................................TATGGAGAAGGCGGCACAGGATCAGG..........................................................................................................................................................................................................................................................................................................	26	20	0.25	5	3	0	2	0
..........................................................................................................................................................................................................................................................................................TGAAGCCGGGAAGC-------GCGGACGCC.............................................	23	20	0.25	5	0	0	5	0
......................................................................................................................................................................................TTTGACGGGCCGTACACGA............................................................................................................................................................	19	20	0.25	5	5	0	0	0
......................................................................................................................................................................................TTTGACGGGCCGTACACGAT...........................................................................................................................................................	20	20	0.25	5	4	0	1	0
...............................................................................................................................................................................................................................................CACAAGACGACTAAGAAAGAAAAGAC............................................................................................	26	8	0.25	2	1	0	0	1
...........................................................................................................................................................................................................................................................AAGAAAGAAAAGACCGCGCACA....................................................................................	22	9	0.22	2	2	0	0	0
.......................................................................................................................................................CGAAGGTTTCGCGGCAAAATTAGCCCT...................................................................................................................................................................................	27	9	0.22	2	2	0	0	0
...........................................................................................................................................................................................................................................................AAGAAAGAAAAGACCGCGCACATC..................................................................................	24	9	0.22	2	2	0	0	0
...........................................................................................................................................................................................................................................................AAGAAAGAAAAGACCGCGCACATCAG................................................................................	26	9	0.22	2	1	0	0	1
........................................................................................................................................................GAAGGTTTCGCGGCAAAATTAG.......................................................................................................................................................................................	22	9	0.22	2	2	0	0	0
..............................................................................................................C----AGTATGGGCCAAAGAGCACCAC............................................................................................................................................................................................................................	23	14	0.21	3	0	0	3	0
....................................................................................................................GTATGGGCCAAAGAGCACCAC............................................................................................................................................................................................................................	21	14	0.21	3	0	0	2	1
..........................................................................................................GAAAC----AGTATGGGCCAAAGAGCACCA.............................................................................................................................................................................................................................	26	5	0.20	1	0	0	0	1
........................................................................................................................................................................................................................................................................................TCTGAAGCCGGGAAGC-------GCGGACGCC.............................................	25	20	0.20	4	3	0	1	0
.................................................................................................................................................................................................................................................................................TCAGCGATCTGAAGCCGGGAAGC-------GCGGA.................................................	28	20	0.20	4	4	0	0	0
......................................................................................................................................................................................TTTGACGGGCCGTACACGATAAAG.......................................................................................................................................................	24	20	0.20	4	4	0	0	0
................................................................................................CAAGGTGCGGGAAAC----AGTATGGGCCAA......................................................................................................................................................................................................................................	27	5	0.20	1	0	1	0	0
....................................................................................GCCGTGGAAACCCAAGGTGCGGGA.........................................................................................................................................................................................................................................................	24	10	0.20	2	2	0	0	0
.....................................................................................................................................................................................................................................................................................................AGC-------GCGGACGCCGACGGGCCAGG..................................	23	20	0.20	4	2	0	2	0
.................................................................................................................................................................................................................TTCACGTCACCAGTTATATGC...............................................................................................................................	21	20	0.20	4	0	0	4	0
............................................................................................................AAC----AGTATGGGCCAAAGAGCACCAA............................................................................................................................................................................................................................	25	5	0.20	1	0	0	0	1
.................................................................ACTACAACCTCAGAAGACGGCCGTGGA.........................................................................................................................................................................................................................................................................	27	10	0.20	2	2	0	0	0
.................................TATGGAGAAGGCGGCACAGGATCAG...........................................................................................................................................................................................................................................................................................................	25	20	0.20	4	4	0	0	0
.......................................................................................................................................................................................TTGACGGGCCGTACACGATAAAGA......................................................................................................................................................	24	20	0.20	4	3	0	1	0
.................................TATGGAGAAGGCGGCACAGGATCA............................................................................................................................................................................................................................................................................................................	24	20	0.20	4	0	0	4	0
............................................................................................................................................................................AGCCCCAAGATTTGACGGGCCGTACACG.............................................................................................................................................................	28	5	0.20	1	0	0	1	0
..........................................................................TCAGAAGACGGCCGTGGAAACCCA...................................................................................................................................................................................................................................................................	24	11	0.18	2	1	0	1	0
...........................................................................CAGAAGACGGCCGTGGAAACCCAAGG................................................................................................................................................................................................................................................................	26	11	0.18	2	1	0	1	0
......................................................................................CGTGGAAACCCAAGGTGCGGGA.........................................................................................................................................................................................................................................................	22	11	0.18	2	2	0	0	0
.......................................................................................................................................................................................................................................TCCTAGAACACAAGACGAC...........................................................................................................	19	11	0.18	2	2	0	0	0
............................................................................AGAAGACGGCCGTGGAAACCCAAG.................................................................................................................................................................................................................................................................	24	11	0.18	2	0	0	2	0
......................................................TCAGGCACGGCACTACAACCTCAGA......................................................................................................................................................................................................................................................................................	25	20	0.15	3	1	0	2	0
.................................................................................................................................................................................................................................................................................TCAGCGATCTGAAGCCGGGAAGC-------GC....................................................	25	20	0.15	3	0	0	3	0
................................................................................................................................................................................................................ATTCACGTCACCAGTTATATGCGTC............................................................................................................................	25	20	0.15	3	3	0	0	0
...............................................................................................................................................................................................................AATTCACGTCACCAGTTATATGC...............................................................................................................................	23	20	0.15	3	3	0	0	0
..................................................................................................................................................................................AAGATTTGACGGGCCGTACACGATA..........................................................................................................................................................	25	20	0.15	3	2	0	1	0
..............................................................................................................................................................................................................................................................................................GCCGGGAAGC-------GCGGACGCCGACGGG.......................................	25	20	0.15	3	0	0	3	0
.................................TATGGAGAAGGCGGCACAGGATCAGGC.........................................................................................................................................................................................................................................................................................................	27	20	0.15	3	3	0	0	0
..........................................................................................................................................................................................................................................................................................TGAAGCCGGGAAGC-------GCGGACGCCGACA.........................................	27	20	0.15	3	2	1	0	0
............................................................................................AACCCAAGGTGCGGGAAAC----AGTATGGGC.........................................................................................................................................................................................................................................	28	7	0.14	1	0	0	1	0
............................................................................................AACCCAAGGTGCGGGAAAC----AGTA..............................................................................................................................................................................................................................................	23	7	0.14	1	1	0	0	0
............................................................................................AACCCAAGGTGCGGGAAAC----AGT...............................................................................................................................................................................................................................................	22	7	0.14	1	1	0	0	0
......................................................................................................................................................................................................................................................................GACCGCGCACATCAGCGATCTGAAG......................................................................	25	7	0.14	1	1	0	0	0
............................................................................................AACCCAAGGTGCGGGAAAC----AGTAT.............................................................................................................................................................................................................................................	24	7	0.14	1	0	0	1	0
.................................................................................................AAGGTGCGGGAAAC----AGTATGG...........................................................................................................................................................................................................................................	21	7	0.14	1	0	0	1	0
..........................................................................................................................................................................................................................................TAGAACACAAGACGACTAA........................................................................................................	19	8	0.13	1	1	0	0	0
..........................................................................................................................................................................................................................................TAGAACACAAGACGACTAAGAAAGG..................................................................................................	25	8	0.13	1	1	0	0	0
.......................................................................ACCTCAGAAGACGGCCGTGGAAACC.....................................................................................................................................................................................................................................................................	25	8	0.13	1	1	0	0	0
...........................................................................................................................................................................................................................................AGAACACAAGACGACTAAGA......................................................................................................	20	8	0.13	1	1	0	0	0
..........................................................................................................................................................................................................................................TAGAACACAAGACGACTAAT.......................................................................................................	20	8	0.13	1	1	0	0	0
..................................................................................................................................................................................................................................................................AAAAGACCGCGCACATCAGCGATCTGT........................................................................	27	8	0.13	1	1	0	0	0
...........................................................................................................................................................................................................................................AGAACACAAGACGACTAAGATTT...................................................................................................	23	8	0.13	1	1	0	0	0
...........................................................................................................................................................................................................................................AGAACACAAGACGACTAAGAAA....................................................................................................	22	8	0.13	1	1	0	0	0
...................................................................................................................................................................................................................................................................AAAGACCGCGCACATCAGCGATCTG.........................................................................	25	8	0.13	1	0	0	1	0
...........................................................................................................................................................................................................................................AGAACACAAGACGACTAA........................................................................................................	18	8	0.13	1	1	0	0	0
.......................................................................................................................................................CGAAGGTTTCGCGGCAAAATTAGCCCCAT.................................................................................................................................................................................	29	8	0.13	1	0	0	0	1
................................................................................................................................................................................................................................................ACAAGACGACTAAGAAAG...................................................................................................	18	8	0.13	1	1	0	0	0
..........................................................................................................................................................................................................................................TAGAACACAAGACGACTAAGAAT....................................................................................................	23	8	0.13	1	1	0	0	0
...............................................................................................................................................................................................................................................CACAAGACGACTAAGAAAA...................................................................................................	19	8	0.13	1	1	0	0	0
.........................................................................................................................................................................................................................................CTAGAACACAAGACGACTAAGAAAG...................................................................................................	25	8	0.13	1	1	0	0	0
...........................................................................................................................................................................................................................................AGAACACAAGACGACTAAGAAAGT..................................................................................................	24	8	0.13	1	1	0	0	0
..................................................................................................................................................................CGGCAAAATTAGCCCCAAGATT.............................................................................................................................................................................	22	8	0.13	1	1	0	0	0
..............................................................................................................................................................TTCGCGGCAAAATTAGCCCCAAGATT.............................................................................................................................................................................	26	8	0.13	1	1	0	0	0
...........................................................................................................................................................................................................................................................................CGCACATCAGCGATCTGAAGCCGGGA................................................................	26	8	0.13	1	1	0	0	0
..........................................................................................................................................................................................................................................TAGAACACAAGACGACTAAGACT....................................................................................................	23	8	0.13	1	0	0	0	1
..........................................................................................................................................................................................................................................TAGAACACAAGACGACTAAGAAAA...................................................................................................	24	8	0.13	1	0	0	0	1
...................................................................................................................................................................................................................................................................AAAGACCGCGCACATCAGCGATCTGA........................................................................	26	8	0.13	1	1	0	0	0
................................................................................................................................................................................................................................................ACAAGACGACTAAGAAAGAAAAGA.............................................................................................	24	8	0.13	1	0	0	1	0
..........................................................................................................................................................................................................................................TAGAACACAAGACGACTAAGAAAGAAAA...............................................................................................	28	8	0.13	1	1	0	0	0
............................................................................................................................................................................................................................................GAACACAAGACGACTAAGAAA....................................................................................................	21	8	0.13	1	1	0	0	0
........................................................................................................................................................GAAGGTTTCGCGGCAAAATTAGCCCCA..................................................................................................................................................................................	27	8	0.13	1	1	0	0	0
..........................................................................................................................................................................................................................................TAGAACACAAGACGACTAAGAAAGAAA................................................................................................	27	8	0.13	1	1	0	0	0
..........................................................................................................................................................................................................................................TAGAACACAAGACGACTAAGAAAGTT.................................................................................................	26	8	0.13	1	0	0	1	0
.........................................................................................................................................................AAGGTTTCGCGGCAAAATTAGCCCCAA.................................................................................................................................................................................	27	8	0.13	1	1	0	0	0
.......................................................................................................................................................CGAAGGTTTCGCGGCAAAATTAGCCCCAC.................................................................................................................................................................................	29	8	0.13	1	0	0	0	1
.......................................................................ACCTCAGAAGACGGCCGTGGAAACCCAA..................................................................................................................................................................................................................................................................	28	8	0.13	1	1	0	0	0
............................................................................................................AAC----AGTATGGGCCAAAGAGCACCC.............................................................................................................................................................................................................................	24	8	0.13	1	0	0	1	0
..........................................................................................................................................................................................................................................................TAAGAAAGAAAAGACCGC.........................................................................................	18	9	0.11	1	0	0	1	0
..................................................................................................................................................................................................................................................................AAAAGACCGCGCACATCAGC...............................................................................	20	9	0.11	1	0	0	1	0
..................................................................................................................................................................................................................................................................AAAAGACCGCGCACATCAGCGAC............................................................................	23	9	0.11	1	0	0	1	0
..........................................................................................................................................................AGGTTTCGCGGCAAAATTAGCCCC...................................................................................................................................................................................	24	9	0.11	1	0	0	1	0
..........................................................................................................................................................................................................................................................TAAGAAAGAAAAGACCGCGCACATCAT................................................................................	27	9	0.11	1	0	0	1	0
....................................................................................................................................................................................................................................................................AAGACCGCGCACATCAGC...............................................................................	18	9	0.11	1	1	0	0	0
...........................................................................................................................................................................................................................................................AAGAAAGAAAAGACCGCGCACAT...................................................................................	23	9	0.11	1	1	0	0	0
...................................................................................................................................................................................................................................................................AAAGACCGCGCACATCAGC...............................................................................	19	9	0.11	1	0	0	1	0
..........................................................................................................................................................AGGTTTCGCGGCAAAATTAGC......................................................................................................................................................................................	21	9	0.11	1	1	0	0	0
..........................................................................................................................................................................................................................................................TAAGAAAGAAAAGACCGCGCACATCAGA...............................................................................	28	9	0.11	1	1	0	0	0
....................................................................................................................................................................................................................................................................AAGACCGCGCACATCAGCG..............................................................................	19	9	0.11	1	0	0	1	0
.........................................................................................................................................................AAGGTTTCGCGGCAAAATTAGCCC....................................................................................................................................................................................	24	9	0.11	1	1	0	0	0
..............................................................................................................................................................................................................................................................AAAGAAAAGACCGCGCACATC..................................................................................	21	9	0.11	1	1	0	0	0
......................................................................................................................................................CCGAAGGTTTCGCGGCAAAATTAGCC.....................................................................................................................................................................................	26	9	0.11	1	1	0	0	0
.......................................................................................................................................................CGAAGGTTTCGCGGCAAAATTAGA......................................................................................................................................................................................	24	9	0.11	1	1	0	0	0
......................................................................................................................................................................................................................................................CGACTAAGAAAGAAAAGACCGCGC.......................................................................................	24	9	0.11	1	0	0	1	0
..............................................................GGCACTACAACCTCAGAAGACGGCCGT............................................................................................................................................................................................................................................................................	27	9	0.11	1	1	0	0	0
.........................................................................................................................................................AAGGTTTCGCGGCAAAATTAGCCCCT..................................................................................................................................................................................	26	9	0.11	1	1	0	0	0
...............................................................GCACTACAACCTCAGAAGACGGCCG.............................................................................................................................................................................................................................................................................	25	9	0.11	1	1	0	0	0

droYak3

A----------------------------------------------------------------------ATCTCCAAAGGAGGCCGTAGAAACCCAAGGTGGGAGAAAC----TGTATGGGCCAAAGAGCACCACCTGTCGAAAGCAGCCGAGGGCTTCGCGGCGAAACTGGCACCAAGGTTCGACGGGCCTTTCAAAATAAAGAAATTCACATCACCAGTAATTTGTGTATTGGAACACGCAACAACGAGGAAGACGAAAACGGTTCATATTGGCGACTTGAAGCCGAGAAGC-------GCGGGCGCCG--------------------------------------------	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
..................................................................................................................................................................................................................................................................................TGGCGACTTGAAGCCGAGAAGC-------GCGGG.................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.....................................................................................................TGGGAGAAAC----TGTATGGGCCAAAGAG..................................................................................................................................................................................................................................	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................TAAAGAAATTCACATCACCAGTAATT..................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................AACGAGGAAGACGAAAACGGTTT.......................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
......................................................................................................................................CACCTGTCGAAAGCAGCCGAGGGC.......................................................................................................................................................................................................	24	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
.......................................................................................................................................ACCTGTCGAAAGCAGCCGAGGGCTT.....................................................................................................................................................................................................	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
...........................................................................................................................................GTCGAAAGCAGCCGAGGGCTTCGCG.................................................................................................................................................................................................	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
........................................................................................................................................CCTGTCGAAAGCAGCCGAGGG........................................................................................................................................................................................................	21	2	0.50	1	0	1	0	0	0	0	0	0	0	0	0
.......................................................................................................................................ACCTGTCGAAAGCAGCCGAGGGC.......................................................................................................................................................................................................	23	2	0.50	1	0	0	0	0	0	0	1	0	0	0	0
...........................................................................................................................................................................TGGCACCAAGGTTCGACGGGCCTTT.................................................................................................................................................................	25	7	0.14	1	0	1	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................CTGGCACCAAGGTTCGACGGGCCT...................................................................................................................................................................	24	8	0.13	1	0	1	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................GGCACCAAGGTTCGACGGGCCTT..................................................................................................................................................................	23	8	0.13	1	0	1	0	0	0	0	0	0	0	0	0

droEre2

A----------------------------------------------------------------------ATCTCCGGAGACGGCCGTGGTAACCCAAGGTGGGGGACAC----AGTGTGGGCCAAGGAACACCACTTTTCGAAGGCAGGTGAAGGCTTTGCAGCGAAGTTGGCGCCAAGGTTCGACGGGCCGTTCAGGATAAAGAAGTTCATTTCACCGGTTATCTGCATCCTGGAACACGCGGCAACCAAGAAGGCGCAAACGGCACACATAAGCGACTTGAAGCCGGGAAGC-------GCGGGAGTT---------------------------------------------	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
.......................................................................................................................................................................................................GATAAAGAAGTTCATTTCACCGGT......................................................................................................................................	24	2	2.50	5	5	0	0	0	0	0	0
...........................................................................................................................................TTCGAAGGCAGGTGAAGGCTTTGC..................................................................................................................................................................................................	24	2	2.00	4	3	0	0	0	1	0	0
.......................................................................................................................................................................................................GATAAAGAAGTTCATTTCACCGG.......................................................................................................................................	23	2	2.00	4	4	0	0	0	0	0	0
.......................................................................................................................................................TGAAGGCTTTGCAGCGAAGTTGGCGCC...................................................................................................................................................................................	27	2	1.50	3	3	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................CACATAAGCGACTTGAAGCCG...................................................................	21	13	1.08	14	0	0	0	0	0	0	14
.............................................................................................................................AAGGAACACCACTTTTCGAAGGCAGG..............................................................................................................................................................................................................	26	2	0.50	1	1	0	0	0	0	0	0
.......................................................................................................................................................................................................GATAAAGAAGTTCATTTCACCGGTTA....................................................................................................................................	26	2	0.50	1	1	0	0	0	0	0	0
...........................................................................................TAACCCAAGGTGGGGGACAC----AGTG..............................................................................................................................................................................................................................................	24	2	0.50	1	1	0	0	0	0	0	0
.......................................................................................................................................................................................................GATAAAGAAGTTCATTTCACCGGTT.....................................................................................................................................	25	2	0.50	1	1	0	0	0	0	0	0
..........................................................................TCCGGAGACGGCCGTGGTAACCCA...................................................................................................................................................................................................................................................................	24	2	0.50	1	1	0	0	0	0	0	0
...................................................................................................................................................................................................TCAGGATAAAGAAGTTCATTTCACCGG.......................................................................................................................................	27	2	0.50	1	1	0	0	0	0	0	0
........................................................................TCTCCGGAGACGGCCGTGGTAACCCAAG.................................................................................................................................................................................................................................................................	28	2	0.50	1	1	0	0	0	0	0	0
........................................................................TCTCCGGAGACGGCCGTGGTAACCCA...................................................................................................................................................................................................................................................................	26	2	0.50	1	1	0	0	0	0	0	0
..........................................................................................................................................................................................................................................TGGAACACGCGGCAACCAAGAAGGCGCA...............................................................................................	28	2	0.50	1	1	0	0	0	0	0	0
...........................................................................................................................................TTCGAAGGCAGGTGAAGGCTTT....................................................................................................................................................................................................	22	2	0.50	1	1	0	0	0	0	0	0
........................................................................................................................GGGCCAAGGAACACCACTTTTCGAAGG..................................................................................................................................................................................................................	27	2	0.50	1	1	0	0	0	0	0	0
..................................................................................................................................................................................................................TCATTTCACCGGTTATCTGCA..............................................................................................................................	21	2	0.50	1	1	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................CGACTTGAAGCCGGGAAGC-------GCGGGA................................................	25	2	0.50	1	1	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................GCGACTTGAAGCCGGGAAGC-------GCGGGA................................................	26	2	0.50	1	1	0	0	0	0	0	0
...........................................................................................................................................TTCGAAGGCAGGTGAAGGCTTTG...................................................................................................................................................................................................	23	2	0.50	1	1	0	0	0	0	0	0
...........................................................................................................................................TTCGAAGGCAGGTGAAGGCTTTGCTC................................................................................................................................................................................................	26	2	0.50	1	1	0	0	0	0	0	0
..........................................................................................................................................................................TTGGCGCCAAGGTTCGACGGGCCG...................................................................................................................................................................	24	10	0.50	5	5	0	0	0	0	0	0
...........................................................................................................................................TTCGAAGGCAGGTGAAGGCTTTGCAGC...............................................................................................................................................................................................	27	2	0.50	1	1	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................GCGACTTGAAGCCGGGAAGC-------GCGGG.................................................	25	8	0.38	3	3	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TCCTGGAACACGCGGCAACCAAGAAGG...................................................................................................	27	9	0.33	3	3	0	0	0	0	0	0
..........................................................................................................................................................................TTGGCGCCAAGGTTCGACGGGCC....................................................................................................................................................................	23	10	0.30	3	2	1	0	0	0	0	0
.........................................................................................................................................................AAGGCTTTGCAGCGAAGTTGGCGCC...................................................................................................................................................................................	25	7	0.29	2	2	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TCCTGGAACACGCGGCAACCAAG.......................................................................................................	23	11	0.27	3	3	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TCCTGGAACACGCGGCAACCAAGA......................................................................................................	24	11	0.27	3	3	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................GCGACTTGAAGCCGGGAAGC-------GCG...................................................	23	11	0.27	3	3	0	0	0	0	0	0
..........................................................................................................................................................................TTGGCGCCAAGGTTCGACGGGC.....................................................................................................................................................................	22	12	0.25	3	2	0	0	0	1	0	0
..........................................................................................................................................................................TTGGCGCCAAGGTTCGACGGGCCGT..................................................................................................................................................................	25	10	0.20	2	2	0	0	0	0	0	0
...................................................................................................................................................................................................................................TGCATCCTGGAACACGCGGCAACCAAG.......................................................................................................	27	10	0.20	2	2	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................GCGACTTGAAGCCGGGAAGC-------G.....................................................	21	15	0.20	3	3	0	0	0	0	0	0
.....................................................................................................TGGGGGACAC----AGTGTGGGC.........................................................................................................................................................................................................................................	19	10	0.20	2	0	0	0	0	0	2	0
....................................................................................................................................................................................................................................................................................GCGACTTGAAGCCGGGAAGC-------GCGG..................................................	24	11	0.18	2	2	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TCCTGGAACACGCGGCAACCAA........................................................................................................	22	11	0.18	2	2	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TCCTGGAACACGCGGCAACCAAGAAG....................................................................................................	26	11	0.18	2	2	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................GCGACTTGAAGCCGGGAAGC-------GC....................................................	22	12	0.17	2	2	0	0	0	0	0	0
......................................................................................................................................................................GAAGTTGGCGCCAAGGTTCGACGG.......................................................................................................................................................................	24	12	0.17	2	1	0	0	0	0	0	1
..........................................................................................................................................................................TTGGCGCCAAGGTTCGACGG.......................................................................................................................................................................	20	13	0.15	2	2	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................TAAGCGACTTGAAGCCGGGAAGC-------GCG...................................................	26	7	0.14	1	1	0	0	0	0	0	0
..........................................................................................................................................................AGGCTTTGCAGCGAAGTTGGCGC....................................................................................................................................................................................	23	7	0.14	1	1	0	0	0	0	0	0
....................................................................................................GTGGGGGACAC----AGTGTGGGCCAAG.....................................................................................................................................................................................................................................	24	9	0.11	1	1	0	0	0	0	0	0
.....................................................................................................TGGGGGACAC----AGTGTGGGCCAAGGAA..................................................................................................................................................................................................................................	26	9	0.11	1	1	0	0	0	0	0	0
......................................................................................................................................................................GAAGTTGGCGCCAAGGTTCGACGGGCC....................................................................................................................................................................	27	10	0.10	1	1	0	0	0	0	0	0
.....................................................................................................................................................................................................................................CATCCTGGAACACGCGGCAACCAATT......................................................................................................	26	10	0.10	1	1	0	0	0	0	0	0
............................................................................................................................................................................GGCGCCAAGGTTCGACGGGCCGTTCA...............................................................................................................................................................	26	10	0.10	1	1	0	0	0	0	0	0
.......................................................................................................GGGGACAC----AGTGTGGGCCAAGGAACA................................................................................................................................................................................................................................	26	10	0.10	1	1	0	0	0	0	0	0
..........................................................................................................................................................................TTGGCGCCAAGGTTCGACGGGCCGTT.................................................................................................................................................................	26	10	0.10	1	1	0	0	0	0	0	0
....................................................................................................................................................................................................................................GCATCCTGGAACACGCGGCAACCAAGAT.....................................................................................................	28	10	0.10	1	1	0	0	0	0	0	0
...........................................................................................................................................................................TGGCGCCAAGGTTCGACGGGCC....................................................................................................................................................................	22	10	0.10	1	1	0	0	0	0	0	0
...................................................................................................................................................................................................................................TGCATCCTGGAACACGCGGCAACCA.........................................................................................................	25	11	0.09	1	1	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TCCTGGAACACGCGGCAACCAAGT......................................................................................................	24	11	0.09	1	1	0	0	0	0	0	0
.................................................................................................................................................................................................................................TCTGCATCCTGGAACACGCGGCAAC...........................................................................................................	25	11	0.09	1	1	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................TAAGCGACTTGAAGCCGGGAAGC-------G.....................................................	24	11	0.09	1	1	0	0	0	0	0	0
.........................................................................................................GGACAC----AGTGTGGGCCAAGGAACG................................................................................................................................................................................................................................	24	11	0.09	1	1	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TCCTGGAACACGCGGCAACCAAGAA.....................................................................................................	25	11	0.09	1	1	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TCCTGGAACACGCGGCAACCAAAG......................................................................................................	24	11	0.09	1	1	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TCCTGGAACACGCGGCAACCAAGAAA....................................................................................................	26	11	0.09	1	1	0	0	0	0	0	0
...............................................................................................................................................................................................................................TATCTGCATCCTGGAACACGCGGCAACC..........................................................................................................	28	11	0.09	1	0	0	0	0	0	0	1
.................................................................................................................................................................................................................................................................................TAAGCGACTTGAAGCCGGGAAGC-------......................................................	23	11	0.09	1	1	0	0	0	0	0	0
........................................................................................................................................................................................................................................CCTGGAACACGCGGCAACCAAGA......................................................................................................	23	11	0.09	1	1	0	0	0	0	0	0
...............................................................................................................................................................................................................................TATCTGCATCCTGGAACACGCGGCAAC...........................................................................................................	27	11	0.09	1	0	0	0	0	1	0	0
...................................................................................................................................................................................................................................................................................AGCGACTTGAAGCCGGGAAG..............................................................	20	12	0.08	1	1	0	0	0	0	0	0
........................................................................................................................................................................................................................................CCTGGAACACGCGGCAACCAAGAAT....................................................................................................	25	12	0.08	1	1	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TCCTGGAACACGCGGCAACCAAGATT....................................................................................................	26	12	0.08	1	1	0	0	0	0	0	0
................................................................................................................................................................TGCAGCGAAGTTGGCGCCAAGGTTCGA..........................................................................................................................................................................	27	12	0.08	1	1	0	0	0	0	0	0
.................................................................................................................................................................GCAGCGAAGTTGGCGCCAAGGTTCGA..........................................................................................................................................................................	26	12	0.08	1	1	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................GCACACATAAGCGACTTGAAGCCGG..................................................................	25	12	0.08	1	1	0	0	0	0	0	0
..........................................................................................................................................................................TTGGCGCCAAGGTTCGACGGG......................................................................................................................................................................	21	12	0.08	1	1	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TCCTGGAACACGCGGCAACCAAGAAT....................................................................................................	26	12	0.08	1	1	0	0	0	0	0	0
............................................................................................................CAC----AGTGTGGGCCAAGGAACACCA.............................................................................................................................................................................................................................	24	12	0.08	1	1	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................GCACACATAAGCGACTTGAAGCCGGGA................................................................	27	12	0.08	1	1	0	0	0	0	0	0
....................................................................................................................................................................................................................................GCATCCTGGAACACGCGGCAACT..........................................................................................................	23	13	0.08	1	1	0	0	0	0	0	0
...........................................................................................................ACAC----AGTGTGGGCCAAGGAACAC...............................................................................................................................................................................................................................	23	13	0.08	1	0	0	0	0	1	0	0
...............................................................................................................................................................TTGCAGCGAAGTTGGCGCCAAGGTTC............................................................................................................................................................................	26	13	0.08	1	1	0	0	0	0	0	0
................................................................................................................................................................TGCAGCGAAGTTGGCGCCAAGGT..............................................................................................................................................................................	23	13	0.08	1	1	0	0	0	0	0	0
.......................................................................................................................................................................................................................................TCCTGGAACACGCGGCAAC...........................................................................................................	19	13	0.08	1	1	0	0	0	0	0	0
...................................................................................................................AGTGTGGGCCAAGGAACACCA.............................................................................................................................................................................................................................	21	14	0.07	1	1	0	0	0	0	0	0
...............................................................................................................................................................................................................................TATCTGCATCCTGGAACACGCGGCAA............................................................................................................	26	15	0.07	1	1	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................CGACTTGAAGCCGGGAAGC-------G.....................................................	20	15	0.07	1	1	0	0	0	0	0	0
........................................................................................................................................................GAAGGCTTTGCAGCGAAG...........................................................................................................................................................................................	18	15	0.07	1	1	0	0	0	0	0	0

dmo_1741

scaffold_6540:530805-530955 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Repeatable elements

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads