ID:

dmo_1721

 Coordinate:

scaffold_6500:30717587-30717737 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-7.4 -7.3 -7.3

Flybase annnotation

exon [dmoj_GLEANR_3092:1]; CDS [Dmoj\GI18277-cds]; intron [Dmoj\GI18277-in]

Repeatable elements

NameClassFamilyStrand
BEL1-I_Dmoj-intLTRPao+
mature
  1. scaffold_1710:3821-3847 -
  2. scaffold_6489:50197-50223 -
  3. scaffold_6500:30256155-30256181 -
  4. dmo_1721  scaffold_6500:30717644-30717670 +
  5. scaffold_6540:1125427-1125453 +
star
  1. scaffold_2749:4703-4729 +
  2. scaffold_6489:50147-50173 -
  3. scaffold_6500:30256105-30256131 -
  4. dmo_1721  scaffold_6500:30717694-30717720 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AGAAGTTTAATCAACTGATCAGCTGCTTAAAGGGACCAGCATTAGAAACGGTAAGGCATTTCAGATCACACCTGAAAACTACCGAAAGGCACTTGAGCGCTTGAATCAACGCTACGACAATCCAACATTAGTGTTCTTGGACAATATCTCGTCGTTATTTATGCTCAAGAGTGTATCAAAGTCAAACAGCCAAGAAATTCGAAGTTTGATTGGCAACTCTACAACTCGCTAAAATCATTAGGCAACGAGGC
***********************************************************************************************************.((((((((((..(((((((....)))...)))).........)))))..............)))))..........******************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body		 V041
embryo
 V049
head
AGAAGTTTAATCAACTGATCAGCTGC................................................................................................................................................................................................................................. 26 0 7 9.57 67 37 27 0 3 0
AGAAGTTTAATCAACTGATCAGCTG.................................................................................................................................................................................................................................. 25 0 7 3.00 21 17 4 0 0 0
...........................................................................................................AACGCTACGACAATCCAACATTAGTGT..................................................................................................................... 27 0 5 2.20 11 4 7 0 0 0
AGAAGTTTAATCAACTGATCAGCT................................................................................................................................................................................................................................... 24 0 7 2.00 14 10 4 0 0 0
...........................................................................................................AACGCTACGACAATCCAACATTAGTG...................................................................................................................... 26 0 5 1.40 7 7 0 0 0 0
ATAAGTTTAATCAACTGATCAGCTGC................................................................................................................................................................................................................................. 26 1 7 1.29 9 0 9 0 0 0
AGAAGTTTAATCAACTGATCAGC.................................................................................................................................................................................................................................... 23 0 7 1.29 9 7 2 0 0 0
.............................................................................................................................................................TTTATGCTCAAGAGTGTATCAAAGTCA................................................................... 27 0 4 1.25 5 3 0 2 0 0
...........................................................................................................AACGCTACGACAATCCAACATTAGT....................................................................................................................... 25 0 5 1.00 5 3 2 0 0 0
..............................................................................................................GCTACGACAATCCAACATTAGTGT..................................................................................................................... 24 0 5 0.80 4 1 2 1 0 0
...........................................................................................................AACGCTACGACAATCCAACATTAG........................................................................................................................ 24 0 5 0.80 4 4 0 0 0 0
............................................................................AACTACCGAAAGGCACTTGAGCGC....................................................................................................................................................... 24 0 3 0.67 2 1 1 0 0 0
..................................................................CACACCTGAAAACTACCGAAAGGC................................................................................................................................................................. 24 0 4 0.50 2 2 0 0 0 0
.............................................................................................................................................................TTTATGCTCAAGAGTGTATCAAA....................................................................... 23 0 4 0.50 2 2 0 0 0 0
........................................................................................................................................................................................AACAGCCAAGAAATTCGAAGTTTGA.......................................... 25 0 2 0.50 1 1 0 0 0 0
.....................................AGCATTAGAAACGGTAAGGCATT............................................................................................................................................................................................... 23 0 2 0.50 1 1 0 0 0 0
......................................GCATTAGAAACGGTAAGGCATTT.............................................................................................................................................................................................. 23 0 2 0.50 1 1 0 0 0 0
.....TTTAATCAACTGATCAGCTGC................................................................................................................................................................................................................................. 21 0 7 0.43 3 1 2 0 0 0
..............................................................................................................GCTACGACAATCCAACATTAGTGTTC................................................................................................................... 26 0 5 0.40 2 2 0 0 0 0
...........................TAAAGGGACCAGCATTAGAAACGGTA...................................................................................................................................................................................................... 26 0 5 0.40 2 2 0 0 0 0
.............................................................................ACTACCGAAAGGCACTTGAGCGC....................................................................................................................................................... 23 0 3 0.33 1 1 0 0 0 0
AGAAGTTTAATCAACTGATCAGCTGCT................................................................................................................................................................................................................................ 27 0 7 0.29 2 2 0 0 0 0
AAAAGTTTAATCAACTGATCAGCTGC................................................................................................................................................................................................................................. 26 1 7 0.29 2 0 2 0 0 0
.GAAGTTTAATCAACTGATCAGCTG.................................................................................................................................................................................................................................. 24 0 7 0.29 2 2 0 0 0 0
...................................................................................................................................TGTTCTTGGACAATATCTCGTCGTTAT............................................................................................. 27 0 4 0.25 1 0 1 0 0 0
.............................................................................................................................................................TTTATGCTCAAGAGTGTATCAAAG...................................................................... 24 0 4 0.25 1 1 0 0 0 0
..................................................................................................GCTTGAATCAACGCTACGACAATCC................................................................................................................................ 25 0 4 0.25 1 1 0 0 0 0
...................................................................................................................................TGTTCTTGGACAATATCTCGTCGT................................................................................................ 24 0 4 0.25 1 1 0 0 0 0
....................................................................................................................................GTTCTTGGACAATATCTCGTCGTTATT............................................................................................ 27 0 4 0.25 1 1 0 0 0 0
...................................................................................................................................TGTTCTTGGACAATATCTCGTCGTTATT............................................................................................ 28 0 4 0.25 1 1 0 0 0 0
...................................................................ACACCTGAAAACTACCGAAAGG.................................................................................................................................................................. 22 0 4 0.25 1 1 0 0 0 0
..................................................................CACACCTGAAAACTACCGAAAGGCACT.............................................................................................................................................................. 27 0 4 0.25 1 1 0 0 0 0
...........................................................................................................AACCCTACGACAATCCAACATTAGTGC..................................................................................................................... 27 2 5 0.20 1 0 1 0 0 0
...............................................................................................................CTACGACAATCCAACATTAGTGTTC................................................................................................................... 25 0 5 0.20 1 1 0 0 0 0
...........................................................................................................TACGCTACGACAATCCAACATTAGTGC..................................................................................................................... 27 2 5 0.20 1 0 1 0 0 0
..........................................................................................................CAACGCTACGACAATCCAACATTAGTG...................................................................................................................... 27 0 5 0.20 1 0 1 0 0 0
..............................................................................................................GGTACGACAATCCAACATTAGTGC..................................................................................................................... 24 2 5 0.20 1 0 1 0 0 0
...........................................................................................................AACGCTACGACAATCCAACATTAGTGC..................................................................................................................... 27 1 5 0.20 1 1 0 0 0 0
...........................................................................................................AACGCTACGACAATCCAACATTA......................................................................................................................... 23 0 5 0.20 1 1 0 0 0 0
..............................................................................................................GCTACGACAATCCAACATTAGT....................................................................................................................... 22 0 5 0.20 1 1 0 0 0 0
...........................................................................................................AACGCTACGACAATCCAACATTAGA....................................................................................................................... 25 1 5 0.20 1 1 0 0 0 0
..........................TTAAAGGGACCAGCATTAGAAACGGT....................................................................................................................................................................................................... 26 0 5 0.20 1 0 0 1 0 0
...........................................................................................................AACGCTACGACAATCCAACATT.......................................................................................................................... 22 0 5 0.20 1 1 0 0 0 0
............................................................................................................ACGCTACGACAATCCAACATTAGT....................................................................................................................... 24 0 5 0.20 1 1 0 0 0 0
.GAAGTTTAATCAACTGATCAGCT................................................................................................................................................................................................................................... 23 0 7 0.14 1 1 0 0 0 0
AGAAGTTTAATCAACTGATCAGCTGCTC............................................................................................................................................................................................................................... 28 1 7 0.14 1 1 0 0 0 0
ATAAGTTTAATCAACTGATCAGC.................................................................................................................................................................................................................................... 23 1 7 0.14 1 0 1 0 0 0
..AAGTTTAATCAACTGATCAGCT................................................................................................................................................................................................................................... 22 0 7 0.14 1 1 0 0 0 0
ATAAGTTTAATCCACTGATCAGCTT.................................................................................................................................................................................................................................. 25 3 7 0.14 1 0 1 0 0 0
ATAAGTTTAATCAACTGATCAGCT................................................................................................................................................................................................................................... 24 1 7 0.14 1 0 1 0 0 0
AGAAGTTTAATCAACTGATCAGCTC.................................................................................................................................................................................................................................. 25 1 7 0.14 1 1 0 0 0 0
.GAAGTTTAATCAACTGATCAGCTGC................................................................................................................................................................................................................................. 25 0 7 0.14 1 1 0 0 0 0
AGAAGTTTAATCAACTGATCAGCC................................................................................................................................................................................................................................... 24 1 7 0.14 1 0 1 0 0 0
AGAAGTTTAATCAACTGATCAGCTAC................................................................................................................................................................................................................................. 26 1 7 0.14 1 1 0 0 0 0
ATAAGTTTAATCAAATGATCAGCTGC................................................................................................................................................................................................................................. 26 2 8 0.13 1 0 1 0 0 0
..............................................................AGACCACACCCCAAAACTAC......................................................................................................................................................................... 20 3 8 0.13 1 0 1 0 0 0
AGATGTTTAATCAACCGATCAGCTGC................................................................................................................................................................................................................................. 26 2 8 0.13 1 0 1 0 0 0
.................................................................................................................ACGACAATACATCATTAGA....................................................................................................................... 19 3 20 0.05 1 0 0 0 0 1
................................................................................................................TACGACAAGACATCATTAG........................................................................................................................ 19 3 20 0.05 1 1 0 0 0 0

Anti-sense strand reads

TCTTCAAATTAGTTGACTAGTCGACGAATTTCCCTGGTCGTAATCTTTGCCATTCCGTAAAGTCTAGTGTGGACTTTTGATGGCTTTCCGTGAACTCGCGAACTTAGTTGCGATGCTGTTAGGTTGTAATCACAAGAACCTGTTATAGAGCAGCAATAAATACGAGTTCTCACATAGTTTCAGTTTGTCGGTTCTTTAAGCTTCAAACTAACCGTTGAGATGTTGAGCGATTTTAGTAATCCGTTGCTCCG
*******************************************************************.((((((((((..(((((((....)))...)))).........)))))..............)))))..........*********************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body		 V041
embryo
 V056
head
 V049
head
.............................................................................................................................................GTTATAGAGCAGCAATAAATACGAGT.................................................................................... 26 0 4 43.25 173 165 2 5 0 1 0
..............................................................................................................................................TTATAGAGCAGCAATAAATACGAGT.................................................................................... 25 0 5 9.20 46 34 12 0 0 0 0
.....................CGACGAATTTCCCTGGTCGTAATCTT............................................................................................................................................................................................................ 26 0 5 7.40 37 35 2 0 0 0 0
.............................................................................................................................................GTTATAGAGCAGCAATAAATACGAG..................................................................................... 25 0 4 3.00 12 12 0 0 0 0 0
......................................CGTAATCTTTGCCATTCCGTAAAGTCT.......................................................................................................................................................................................... 27 0 2 2.50 5 5 0 0 0 0 0
......................GACGAATTTCCCTGGTCGTAATCTT............................................................................................................................................................................................................ 25 0 5 2.40 12 11 1 0 0 0 0
...................................................................................................................................................................................TCAGTTTGTCGGTTCTTTAAGCTT................................................ 24 0 2 2.00 4 2 2 0 0 0 0
.....................CGACGAATTTCCCTGGTCGTAATCT............................................................................................................................................................................................................. 25 0 5 1.60 8 6 2 0 0 0 0
............................................................................................................................................TGTTATAGAGCAGCAATAAATACGAGT.................................................................................... 27 0 4 1.50 6 5 1 0 0 0 0
...............................CCCTGGTCGTAATCTTTGCCATTCCGT................................................................................................................................................................................................. 27 0 2 1.50 3 1 2 0 0 0 0
...........................................................................................................................................CTGTTATAGAGCAGCAATAAATACGAGT.................................................................................... 28 0 4 1.25 5 5 0 0 0 0 0
..............................................................................................................................................TTATAGAGCAGCAATAAATACGATT.................................................................................... 25 1 5 1.20 6 0 6 0 0 0 0
...................................................................................................................................................................................................TAAAGGCTCAAACTAACCG..................................... 19 3 20 1.05 21 17 0 4 0 0 0
........................CGAATTTCCCTGGTCGTAATCTT............................................................................................................................................................................................................ 23 0 5 1.00 5 1 4 0 0 0 0
................................................................................................................................................ATAGAGCAGCAATAAATACGAGT.................................................................................... 23 0 5 1.00 5 4 1 0 0 0 0
..................................................................................................................................................................................TTCAGTTTGTCGGTTCTTTAAGCGT................................................ 25 1 2 1.00 2 0 2 0 0 0 0
...............................................................CTAGTGTGGACTTTTGATGGCTTT.................................................................................................................................................................... 24 0 4 1.00 4 2 1 0 1 0 0
.......................ACGAATTTCCCTGGTCGTAATCTT............................................................................................................................................................................................................ 24 0 5 0.80 4 4 0 0 0 0 0
.................................................................................................GCGAACTTAGTTGCGATGCTGTT................................................................................................................................... 23 0 4 0.75 3 1 0 0 2 0 0
.............................................................................................................................................................................................................................GTTGAGCGATTTTAGTAATCCG........ 22 0 3 0.67 2 2 0 0 0 0 0
....................................................TTCCGTAAAGTCTAGTGTGGACTT............................................................................................................................................................................... 24 0 5 0.60 3 3 0 0 0 0 0
...........................................................................................................................................CTGTTATAGAGCAGCAATAAATACGAG..................................................................................... 27 0 4 0.50 2 2 0 0 0 0 0
.......................................................................................................................................................................TCTCACATAGTTTCAGTTTGTCGGTTCTT....................................................... 29 0 2 0.50 1 1 0 0 0 0 0
....................................................................................................................................................................................CAGTTTGTCGGTTCTTTAAGCTTCA.............................................. 25 0 2 0.50 1 1 0 0 0 0 0
...................................................................................................................................................................................TCAGTTTGTCGGTTCTTTATGCTT................................................ 24 1 2 0.50 1 0 1 0 0 0 0
..................................................................................................................................................................................TTCAGTTTGTCGGTTCTTTAAGCTT................................................ 25 0 2 0.50 1 1 0 0 0 0 0
...............................CCCTGGTCGTAATCTTTGCCATTCCTT................................................................................................................................................................................................. 27 1 2 0.50 1 0 1 0 0 0 0
....................................................................................................................................................................................CAGTTTGTCGGTTCTTTAAGCTT................................................ 23 0 2 0.50 1 0 1 0 0 0 0
................................................................................................................................................................................GTTTCAGTTTGTCGGTTCTTTAAGCTT................................................ 27 0 2 0.50 1 1 0 0 0 0 0
.........................................................................................................................................................................TTACATAGTTTCAGTTTGTCGGTTC......................................................... 25 1 2 0.50 1 1 0 0 0 0 0
.................................................................................................................................................................................TTTCAGTTTGTCGGTTCTTTAAGCTT................................................ 26 0 2 0.50 1 1 0 0 0 0 0
..........................................................................................................................................................................CACATAGTTTCAGTTTGTCGGTTCTTT...................................................... 27 0 2 0.50 1 1 0 0 0 0 0
..................................................................................................................................................................................TTCAGTTTGTCGGTTCTTTAAGCT................................................. 24 0 2 0.50 1 1 0 0 0 0 0
.....................................................................................................................GTTAGGTTGTAATCACAAGAACCT.............................................................................................................. 24 0 6 0.50 3 3 0 0 0 0 0
....................TCGACGAATTTCCCTGGTCGTAATCTT............................................................................................................................................................................................................ 27 0 5 0.40 2 2 0 0 0 0 0
..............................................................................................................................................TTATAGAGCAGCAATAAATACGAG..................................................................................... 24 0 5 0.40 2 2 0 0 0 0 0
...............................................................................................................................................TATAGAGCAGCAATAAATACGAGT.................................................................................... 24 0 5 0.40 2 1 1 0 0 0 0
..........................................................AAAGTCTAGTGTGGACTTTTGAAGGCT...................................................................................................................................................................... 27 1 5 0.40 2 2 0 0 0 0 0
..............................................................................................................................................CTATAGAGCAGCAATAAATACGAGT.................................................................................... 25 1 5 0.40 2 0 1 0 1 0 0
..........................................................AAAGTCTAGTGTGGACTTTTGATGGCTT..................................................................................................................................................................... 28 0 3 0.33 1 1 0 0 0 0 0
....................................................................................TTTCCGTGAACTCGCGAACTTAGTT.............................................................................................................................................. 25 0 3 0.33 1 1 0 0 0 0 0
................................................................................................................................................................................................................GAACCGTTGAGATATGGAGCGA..................... 22 3 3 0.33 1 0 0 0 0 1 0
..............................................................................GATGGCTTTCCGTGAACTCGCGAACT................................................................................................................................................... 26 0 3 0.33 1 1 0 0 0 0 0
............................................................AGTCTAGTGTGGACTTTTGATGGCTT..................................................................................................................................................................... 26 0 3 0.33 1 1 0 0 0 0 0
...............................................................CTAGTGTGGACTTTTGAAGGCTT..................................................................................................................................................................... 23 1 6 0.33 2 2 0 0 0 0 0
...........................................................................................GAACTCGCGAACTTAGTTG............................................................................................................................................. 19 0 3 0.33 1 1 0 0 0 0 0
..........................................................AAAGTCTAGTGTGGACTTTTGATGGCT...................................................................................................................................................................... 27 0 3 0.33 1 1 0 0 0 0 0
................................................................................................CGCGAACTTAGTTGCGATGCTGTT................................................................................................................................... 24 0 3 0.33 1 0 1 0 0 0 0
......................................................................................TCCGTGAACTCGCGAACTTAGTTGC............................................................................................................................................ 25 0 3 0.33 1 1 0 0 0 0 0
...............................................................CTAGTGTGGACTTTTGAAGGCTTT.................................................................................................................................................................... 24 1 6 0.33 2 2 0 0 0 0 0
................................................................................................................ATGCTGTTCTGTAGTAATC........................................................................................................................ 19 3 20 0.30 6 5 0 1 0 0 0
.................................................................................................GCGAACTTAGTGGCGATGATGTT................................................................................................................................... 23 2 4 0.25 1 0 0 0 1 0 0
..................................................................................................CGAACTTAGTTGCGATGCTGGT................................................................................................................................... 22 1 4 0.25 1 0 1 0 0 0 0
....................................................................................................................................CAAGAACCTGTTATAGAGCAGCAATAAAT.......................................................................................... 29 0 4 0.25 1 0 1 0 0 0 0
..............GACTAGTCGACGAATTTCCCTGGTCGT.................................................................................................................................................................................................................. 27 0 4 0.25 1 1 0 0 0 0 0
.................................................................................................GCGAACTTAGTTGCGATGCTGTTAGGT............................................................................................................................... 27 0 4 0.25 1 1 0 0 0 0 0
............................................................................................................................................CGTTATAGAGCAGCAATAAATACGAGT.................................................................................... 27 1 4 0.25 1 0 1 0 0 0 0
...........................................................................................................................................CTGTTATAGAGCAGCAGTAAATACGAGT.................................................................................... 28 1 4 0.25 1 1 0 0 0 0 0
.............................................................................................................................................GTTATAGAGCAGCAATAAATACGAGTGA.................................................................................. 28 2 4 0.25 1 1 0 0 0 0 0
.............................................................................................................................................GTTATAGAGCAGCAATAAATACGA...................................................................................... 24 0 4 0.25 1 1 0 0 0 0 0
...........................................................................................................................................................................ACATAGTTTCAGTTTGTCGGT........................................................... 21 0 4 0.25 1 1 0 0 0 0 0
...............................................................CTAGTGTGGACTTTTGATGGCTTTCCGT................................................................................................................................................................ 28 0 4 0.25 1 1 0 0 0 0 0
.............................................................................................................................................GTTATGGAGCAGCAATAAATACGAG..................................................................................... 25 1 4 0.25 1 1 0 0 0 0 0
...................................................................................................GAACTTAGTTGCGATGCT...................................................................................................................................... 18 0 4 0.25 1 0 0 1 0 0 0
...............................................................CTAGTGTGGACTTTTGATGGCT...................................................................................................................................................................... 22 0 4 0.25 1 1 0 0 0 0 0
.............................................................................................................................................GTTATAGAGCAGCAATAAATA......................................................................................... 21 0 4 0.25 1 1 0 0 0 0 0
........................................................................................................TAGTTGCGATGCTGTTAGGTTGTAAT......................................................................................................................... 26 0 5 0.20 1 1 0 0 0 0 0
...............................................................................................................................................TATAGAGCAGCAATAAATACGAGTTCT................................................................................. 27 0 5 0.20 1 1 0 0 0 0 0
....................CCGACGAATTTCCCTGGTCGTAATCT............................................................................................................................................................................................................. 26 1 5 0.20 1 1 0 0 0 0 0
....................TCGACGAATTTCCCTGGTCGTAATCT............................................................................................................................................................................................................. 26 0 5 0.20 1 0 1 0 0 0 0
...........................................................AAGTCTAGTGTGGACTTTTGAAGGCTT..................................................................................................................................................................... 27 1 5 0.20 1 1 0 0 0 0 0
..............................................................................................................................................TTATAGAGCAGCAATAAATACTAGT.................................................................................... 25 1 5 0.20 1 0 1 0 0 0 0
..............................CCCCTGGTCGTAATCTTTGCTAGT..................................................................................................................................................................................................... 24 3 5 0.20 1 0 1 0 0 0 0
............................TTTCCCTGGTCGTAATCTT............................................................................................................................................................................................................ 19 0 5 0.20 1 1 0 0 0 0 0
..................AGTCGACGAATTTCCCTGGTCGTAATCTT............................................................................................................................................................................................................ 29 0 5 0.20 1 1 0 0 0 0 0
...................GTCGACGAATTTCCCTGGTCGTAAT............................................................................................................................................................................................................... 25 0 5 0.20 1 1 0 0 0 0 0
.....................................................TCCGTAAAGTCTAGTGTGGACGT............................................................................................................................................................................... 23 1 5 0.20 1 0 1 0 0 0 0
..................AGTCGACGAATTTCCCTGGTCGTAATCT............................................................................................................................................................................................................. 28 0 5 0.20 1 1 0 0 0 0 0
...............................................................................................................................................TATAGAGCAGCAATAAATACGAG..................................................................................... 23 0 5 0.20 1 1 0 0 0 0 0
......................................................................GGACTTTTGATGGCTTTCCGTGAACT........................................................................................................................................................... 26 0 5 0.20 1 1 0 0 0 0 0
.....................CGACGAATTTCCCTGGTCGTAATC.............................................................................................................................................................................................................. 24 0 5 0.20 1 1 0 0 0 0 0
..................TGTCGACCAACTTCCCTGGT..................................................................................................................................................................................................................... 20 3 10 0.20 2 2 0 0 0 0 0
..............................................................................................................................................TTATAGAGCAGCAATAAA........................................................................................... 18 0 5 0.20 1 0 1 0 0 0 0
.........................GAATTTCCCTGGTCGTAAT............................................................................................................................................................................................................... 19 0 5 0.20 1 1 0 0 0 0 0
........................................................................................................CTGTTGCGATGCTGTTAGGAT.............................................................................................................................. 21 3 5 0.20 1 0 0 0 0 0 1
.........................GAATTTCCCTGGTCGTAATCTTT........................................................................................................................................................................................................... 23 0 5 0.20 1 1 0 0 0 0 0
.................................................................................................................................................TAGAGCAGCAATAAATACGAGT.................................................................................... 22 0 5 0.20 1 1 0 0 0 0 0
.............................TTCCCTGGTCGTAATCTTTGCCAT...................................................................................................................................................................................................... 24 0 5 0.20 1 1 0 0 0 0 0
........................................................................................................................AGGTTGTAATCACAAGAACCTGTTAT......................................................................................................... 26 0 6 0.17 1 1 0 0 0 0 0
.......ATTAGTTGACTAGTCGACGAATTTCCCT........................................................................................................................................................................................................................ 28 0 6 0.17 1 1 0 0 0 0 0
..............................................................CCTAGTGTGGACTTTTGAAGGCTTT.................................................................................................................................................................... 25 2 6 0.17 1 1 0 0 0 0 0
...................GTCGACCAACTTCCCTGGTT.................................................................................................................................................................................................................... 20 3 13 0.15 2 2 0 0 0 0 0
.........TAGTTGACTAGTCGACGAATTTCCCT........................................................................................................................................................................................................................ 26 0 8 0.13 1 1 0 0 0 0 0
.........TAGTTGACTAGTCGACGAATTTCC.......................................................................................................................................................................................................................... 24 0 8 0.13 1 1 0 0 0 0 0
........................................................................................................................CCGTTGTAATCACAAGAAC................................................................................................................ 19 2 9 0.11 1 1 0 0 0 0 0
.......................................................................................................................................................AGCCATAGATACGAGTTC.................................................................................. 18 2 9 0.11 1 1 0 0 0 0 0
..........................................................................................................GTTGCCATGCTGGTAGGC............................................................................................................................... 18 3 20 0.05 1 1 0 0 0 0 0
......................................................................................................................................................................................................AGCTTCAAATTAACCCTAG.................................. 19 3 20 0.05 1 1 0 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6500:30717537-30717787 + dmo_1721 AGAAGTTTAATCAACTGATCAGCTGCTTAAAGGGACCAGCATTAGAAACGGT-AAGGCATTTCAGATCACACCTGAAAACTACCGAAAGGCACTTGAGCGCTTGAATCAACGCTACGACAATCCAACATTAGTGTTCTTGGACAATATCTCGTCGTTATTTATGCTCAAGAGTGTATCAAAGTCAA--ACAGCCAAGAAATTCGAAGTTTGATTGGCAA-----------CTCTACAACTCGCTAAAATCATTAGGCAACGAGGC
droVir3 scaffold_12970:726478-726738 - AAAAGTTTAATCATCTGCTGAATTGCTTGAAGGGCCCTGCCCTACAAGCAGTAAAGGCATTCCAAGTCACTCAGGAAAATTATCCCAAGGCTCTTGCTCGTTTAAGTGAACGTTATGACAAGCCTACACTTACATTTTT-GACACCATAGAATCACTATTCAATCTACAGCCAGTCGACAAACCGG--ACGGAAATCAGCTGCGCAGTCTGCTGGACAATGCGT-CAGCCCTGTATTCATCATTATCGTCATTGGGTACCGGATC
droGri2 scaffold_9682:1767-2028 - AGAAGTTTAACTATCTACTCAACTGCTTAAAGGGTGCTGCACTGGAGTGCGTGAAGGCATTTCCTGTCACCAATGAAAACTACGCTAAGGCATTAGAAAAATTAAAGTCTCGGTATGACAAGCCAGCATTGATATTTACAGAGACAATATCGCCAATTATTCAGTTGCCTTCAGCTAGTTCATCAA--ACGTTACTCAGCTACGGTCGTTAATTGATAATGCAT-CGGCATTATTTAGTTCACTTTCGTCCTTAGGCTCTGGCAT
droWil2 scf2_1100000004967:1182499-1182760 + ACAAATTTAACTATCTAATAAGTTGTCTATCTGGCCAAGCTCTAAGCGTAGTCTCGCCATTTCAAATATCAGACGAAAATTATCCCAAGGCCCTAGAGCGCCTCAACGAGCGATATGACAAGAAAGTTCTTATTTTCGTAGAACATATTTCAAGTTTATTTAACATTGCTAGCATGAAAAAGGCAG--ACGCTGTTACCCTACGTACAATTTTGGATACGGTTT-CAGCTCTACGCGGATCATTAGTGTCTCTTGGGTCTGAAGC
dp5 Unknown_singleton_2169:350-611 - AAAAGTTTAATTATTTGCTGACCTGCCTCACGGGGCCGGCATTAGATACAAATCAGGCATTCCAGGTTACAAGCGAAAACTATCCGAAGGCCCTAGCAAAACTCAAAAGCCGTTTTGATAATCCTACTCTTATATTTTTAGAAGATATTGAGGCATTGTTTGCACTACAACCTGTGGAAAGGTCAA--ACAGTCAGCAGCTTCACAGCCTAGGGGATAAGGCAT-CAGCTATATTAAGCTCGCTGGAGTCCATCGGCAAACCTGA
droPer2 scaffold_71:120988-121240 - AAAAGTTTAATTATTTGCTGACCTGCCTGACGGGGCCGGCATTAGATACAATTCTGGCATTCCAGGTTACAAGCGAAAACTATCCGAAGGCCCTAGCAAAACTCAAAAGCCGTTTTGATAATCCTACTCTTATATTTTTAGAAGGTATTGAGGCATTGTTTGCACTACAACCTGTGGAAAGGTCAA--ACAGTCAGCAGCTTCACAGTC---------AGGCAT-CCGCTATATTAAGCTCGCTGGAGTCCATCGGCAAACCTGA
droAna3 scaffold_13230:1939194-1939437 - AGAAATTTAATCATTTAACTTCTTGCCTCCCTGGTGAAGCCTTAGGAACTGTCAAGGCATTCCAGGTCACCGAGAGTAATTATGACAAAGCTATCGCTAGTCTAAAAAAAGTTTATGATAACGAATGTCTCATCTTTGCGAACCAAATACGTCAACTGTTCAGCCTTCCGAAAATTT--------------------CGTTGAGGGGTCTCATCGACACTGTGT-CATCAATTTATGGATCACTATTATCCATAGGAGATGATAC
droBip1 scf7180000396025:40470-40732 + AAAAATTTAATCACCTGTTGTCATGTCTGGAGAAAGAAGCGTTGGGGACCGTGAAAGCATATCAAATAACTGAGACCAATTACCCAAAGGCACTAGCCGCCTTAAATCGGGTGTACGACAATCAGTGTTTAATTTTTTTTGATTGTATCTCACGCCTCTTCGACATTCCCTCAATGCAGGGTCCGT--CCGCCTTATCACTACGTCACATGATAGATACTGTCTACAGCTATCTACGAATCCTTGCTTTCACTAGGCAGTGACAA
droKik1 scf7180000298335:448-689 - AGAAATTTAATCAGTTGCTAAATTGTCTACGTGGATCAGCTCTTGAAACGGTTAAGGCATTCCAAGTTACACCTGAAAACTACGCAAAGGCTCTTTAGCGTCTAAAGAGTCGTTATGACAACCCAACCCTAGTTTTTCTGGACAATATATCGTCGCTATTCAATTTGCCAAATGTTGCGAAATCCA--ATAGCCAAACGTTGCGCAGCCTTATTGACAATGCAA-CGGCATTGTTTAACTCGTTA--------------------
droFic1 scf7180000453591:13592-13853 + AAAAATTCAATCAGCTTATCAGTTGCTTGTCTGGAGCAGCTTTAGAGACGGTTAAGGCCTTTCAAATCACTCCCGATAATTACCCAAAGGCTCTCGAGCGCCTTAAGGAGCGCTACGATAACCCCACTCTGGTATTTTTAGATAGTATATCATCCTTGTTCAACCTGCCAGCCGTTACTAAACCAA--ATAGCAACCAACTCCGTAGCCTAATAGATAATGCAG-CCGCCCTATATAATTCGCTGAGGTCACTGGGCTCTGACTC
droEle1 scf7180000490470:8323-8572 + AGAAGTTTAACCATCTCATAAACTGTCTCCGAGGTGCTGCCCTAGAAGCCGCCAGGGCGTTTCAGGTCACACATGAAAATTACGGTAAGGCTTTACTACGCATCCAAATCCGATACGATAATCCTACAATTGTATTTTTGGACAACATTACGTCACTGTTCAACTTGCCAAGTGTGTCCATGACAACAAT-----GGTGGTGCGCAGCCTAGTCGACAACCCGT-CGGCATTATTAAACTTCCTGC---------GTCTCTAAGA
droRho1 scf7180000778019:17482-17743 + AAAAATTCAATCAGCTTATCAGTTGCTTATCTGGAGCAGCTTTAGAGACAGTAAAGGCCTTTCAAATTACTCCCGACAACTACCCAAAGGCTCTCGAGCGCCTCAAGGAGCGCTATGATAACCCCACTCTGGTATTTTTAGATAGCATATCATCCTTGTTCAACCTGCCAGCCGTTACCAAACCAA--ATAGAAACCAACTTCGTAGCCTAATAGATAATGCAG-CCGCCCTATATAACTCGTTGAAGTCATTGGGCTCTGAATC
droBia1 scf7180000302140:144979-145240 - AGAAATTGAATCAATTGCTAAATTGTTTACGTGGATCAGCTCTTGAAACTGGTAAGGCTTTCCAAGTTACGTCCGAAAATTACGCAAAGGCTCTCGAGCGCCTAAAGAGTCGTTATGACAACCCCACCCTTGTCTTTTTGGATAATATATCGTCGCTATTCAATTTACCGAAGTTTGCGAAATCAA--ATAGATAAACGTTGCGCAGCCTTATTGACAATGCAT-CGGCATTGTTTAACTCGTTTTTATCCCTTGGGAGTGAAAC
droTak1 scf7180000414408:9917-10161 + AAAAATTCAATCAGCTTATCAGTTGCTTATCTGGAGCAGCTTTAGAAACAGTAAAGGCTTTTCAAATTACTCCCGATAACTACCCAAAGGCTCTTGAGCGCCTTAAGGAGCGCTATGATAACCCCACTCTGGTATTTTTAGATAGCATATCATCCTTGTTCAACCTGCCAGCCGTTACCAAACCAA--ATAGTAACCAACTTCGTCG------------------CCGCTCTATATAACTCGCTGAGGTCATTGGGCTCTGAATC
droEug1 scf7180000407242:2970-3231 - ACAAATTTAATCATCTCCGTAATTGTTTAAAGGGACCTGCACTGGAAGCTGTCGCAGCCTTTCCGGTCACTGGAGAAAATTATGCGAAGGCGCTGGAACGGCTGAAGGACCGGTATGACAAGCCTGCCCTAATCTTTGTCGAAACGATAGCCTCGATTTTTAAACTGCCGCCGGCTGCTGCGGCAA--GTGCTCAACAGCTCCGCAGCCTAATCGACAACGCAT-CCGCGTTATATAGTGCCCTTTCATCGCTAGGCTCGGACGC
droSim2 node_41337:125-386 + AGAAGTTCAACCAGTTGTTAAACTGTCTTCGAGGACCAGCCCTTGAAACGGTTCGAGCTTTCCAGGTGACCGCAGACAACTACACAAAGGCTCTGGACCGCTTAAAGCAGCGCTATGACAACCCGACTCTCGTATTTTTGGATAACATATCGTCACTCTTCGCATTGCCAACTGTCGCCAAGTCAA--ATGGTCAGCAGTTGCGCAGCCTAATCGATAATGCAT-CCGCATTATACAACTCGTTGCGTTCGTTGAGCACCGAGCC
droYak3 v2_chrUn_680:4040-4301 + AGAAGTTCAACCAGTTGTTAAACTGTCTTCGAGGACCAGCCCTTGAAACGGTTCGAGCTTTCCAGGTGACCGCAGACAACTACACAAAGGCTCTGGACCGCTTAAAGCAGCGCTATGACAACCCGACTCTCGTATTTTTGGATAACATATCGTCACTCTTCGCATTGCCAACTGTCGCCAAGTCAA--ATGGTCAGCAGTTGCGCAGCCTAATCGATCATGCAT-CCGCATTATACAACTCGTTGCGTTCGTTGAGCACCGAGCC
droEre2 scaffold_4845:2338381-2338641 + AGAAGTTCAACCAGTTGTTAAACTGTCTTCGAGGATCCGCCCTTGAAACGGTTCGGGCTTTCCAGGTGACCGCAGACAACTACACAAAGGCTCTGGACCGCTTAAAGCAGCGCTATGACAACCCCACTCTCGTATTCTTGGATAACATATCGTCACACTTCGCATTGCCAACTGTCGCCAAGTCAA--ATGGTCAGCAGTTGCGCAGCCTAATCGATAATGCAT-CCGCATTATACAACTCGTTGCGATCGTTAAGCACCGAGG-

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
AGAAGTTTAATCAACTGATCAGCTGCTTAAAGGGACCAGCATTAGAAACGGT-AAGGCATTTCAGATCACACCTGAAAACTACCGAAAGGCACTTGAGCGCTTGAATCAACGCTACGACAATCCAACATTAGTGTTCTTGGACAATATCTCGTCGTTATTTATGCTCAAGAGTGTATCAAAGTCAA--ACAGCCAAGAAATTCGAAGTTTGATTGGCAA-----------CTCTACAACTCGCTAAAATCATTAGGCAACGAGGCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
AGAAGTTTAATCAACTGATCAGCTGC...............................................................................................................................................................................................................................................2679.576737300270
AGAAGTTTAATCAACTGATCAGCTG................................................................................................................................................................................................................................................2573.00211700040
............................................................................................................AACGCTACGACAATCCAACATTAGTGT..................................................................................................................................2752.2011400070
AGAAGTTTAATCAACTGATCAGCT.................................................................................................................................................................................................................................................2472.00141000040
............................................................................................................AACGCTACGACAATCCAACATTAGTG...................................................................................................................................2651.407700000
AGAAGTTTAATCAACTGATCAGC..................................................................................................................................................................................................................................................2371.299700020
..............................................................................................................................................................TTTATGCTCAAGAGTGTATCAAAGTCA................................................................................2741.255300002
............................................................................................................AACGCTACGACAATCCAACATTAGT....................................................................................................................................2551.005300020
...............................................................................................................GCTACGACAATCCAACATTAGTGT..................................................................................................................................2450.804100021
............................................................................................................AACGCTACGACAATCCAACATTAG.....................................................................................................................................2450.804400000
.............................................................................AACTACCGAAAGGCACTTGAGCGC....................................................................................................................................................................2430.672100010
...................................................................CACACCTGAAAACTACCGAAAGGC..............................................................................................................................................................................2440.502200000
..............................................................................................................................................................TTTATGCTCAAGAGTGTATCAAA....................................................................................2340.502200000
.........................................................................................................................................................................................A--ACAGCCAAGAAATTCGAAGTTTGA.....................................................2520.501100000
.....................................AGCATTAGAAACGGT-AAGGCATT............................................................................................................................................................................................................2320.501100000
......................................GCATTAGAAACGGT-AAGGCATTT...........................................................................................................................................................................................................2320.501100000
.....TTTAATCAACTGATCAGCTGC...............................................................................................................................................................................................................................................2170.433100020
...............................................................................................................GCTACGACAATCCAACATTAGTGTTC................................................................................................................................2650.402200000
...........................TAAAGGGACCAGCATTAGAAACGGT-A...................................................................................................................................................................................................................2650.402200000
..............................................................................ACTACCGAAAGGCACTTGAGCGC....................................................................................................................................................................2330.331100000
AGAAGTTTAATCAACTGATCAGCTGCT..............................................................................................................................................................................................................................................2770.292200000
.GAAGTTTAATCAACTGATCAGCTG................................................................................................................................................................................................................................................2470.292200000
....................................................................................................................................TGTTCTTGGACAATATCTCGTCGTTAT..........................................................................................................2740.251000010
..............................................................................................................................................................TTTATGCTCAAGAGTGTATCAAAG...................................................................................2440.251100000
...................................................................................................GCTTGAATCAACGCTACGACAATCC.............................................................................................................................................2540.251100000
....................................................................................................................................TGTTCTTGGACAATATCTCGTCGT.............................................................................................................2440.251100000
.....................................................................................................................................GTTCTTGGACAATATCTCGTCGTTATT.........................................................................................................2740.251100000
....................................................................................................................................TGTTCTTGGACAATATCTCGTCGTTATT.........................................................................................................2840.251100000
....................................................................ACACCTGAAAACTACCGAAAGG...............................................................................................................................................................................2240.251100000
...................................................................CACACCTGAAAACTACCGAAAGGCACT...........................................................................................................................................................................2740.251100000
................................................................................................................CTACGACAATCCAACATTAGTGTTC................................................................................................................................2550.201100000
...........................................................................................................CAACGCTACGACAATCCAACATTAGTG...................................................................................................................................2750.201000010
............................................................................................................AACGCTACGACAATCCAACATTAGTGC..................................................................................................................................2750.201100000
............................................................................................................AACGCTACGACAATCCAACATTA......................................................................................................................................2350.201100000
...............................................................................................................GCTACGACAATCCAACATTAGT....................................................................................................................................2250.201100000
............................................................................................................AACGCTACGACAATCCAACATTAGA....................................................................................................................................2550.201100000
..........................TTAAAGGGACCAGCATTAGAAACGGT-....................................................................................................................................................................................................................2650.201000001
............................................................................................................AACGCTACGACAATCCAACATT.......................................................................................................................................2250.201100000
.............................................................................................................ACGCTACGACAATCCAACATTAGT....................................................................................................................................2450.201100000
.GAAGTTTAATCAACTGATCAGCT.................................................................................................................................................................................................................................................2370.141100000
AGAAGTTTAATCAACTGATCAGCTGCTC.............................................................................................................................................................................................................................................2870.141100000
..AAGTTTAATCAACTGATCAGCT.................................................................................................................................................................................................................................................2270.141100000
AGAAGTTTAATCAACTGATCAGCTC................................................................................................................................................................................................................................................2570.141100000
.GAAGTTTAATCAACTGATCAGCTGC...............................................................................................................................................................................................................................................2570.141100000
AGAAGTTTAATCAACTGATCAGCC.................................................................................................................................................................................................................................................2470.141000010
droVir3
AAAAGTTTAATCATCTGCTGAATTGCTTGAAGGGCCCTGCCCTACAAGCAGTAAAGGCATTCCAAGTCACTCAGGAAAATTATCCCAAGGCTCTTGCTCGTTTAAGTGAACGTTATGACAAGCCTACACTTACATTTTT-GACACCATAGAATCACTATTCAATCTACAGCCAGTCGACAAACCGG--ACGGAAATCAGCTGCGCAGTCTGCTGGACAATGCGT-CAGCCCTGTATTCATCATTATCGTCATTGGGTACCGGATCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............................................................................................................................................................TCAATCTACAGCCAGTCGACAAACC.................................................................................25162.25360000700000030100000000000003000000005017000000000000000000000000
...........................................................................................................................................................................................................................................TTCATCATTATCGTCATTGGGTACC.....25151.73261000900000020100000000000001000000000011100000000000000000000000
..................................................................TCACTCAGGAAAATTATCCCAAGGCTC............................................................................................................................................................................2731.675000000000000000000000000000000000000104000000000000000000000000
.......TAATCATCTGCTGAATTGCTTGAAGGG.......................................................................................................................................................................................................................................2781.5012000020000002010000000000000200000000203000000000000000000000000
.......TAATCATCTGCTGAATTGCTTGAAG.........................................................................................................................................................................................................................................2591.3312000020000000000000000000001000000000009000000000000000000000000
...........................................................................................................................................................................................................................................TTCATCATTATCGTCATTGGGTACCG....26141.0715102020000000000000000000000100000000009000000000000000000000000
...........................................................................................................................................................................................................................................TTCATCATTATCGTCATTGGGTACCGGA..28140.9313100050000001000000000000000100000000005000000000000000000000000
...............................................................................................................................................................TCAATCTACAGCCAGTCGACAAAC..................................................................................24160.8113000020000000010000000000001100000000107000000000000000000000000
........................................................................................................................................................TCACTATTCAATCTACAGCCAGTCGACA.....................................................................................28160.8113000030000000000000000000000400001000302000000000000000000000000
.......................................................................................................................................................................................................................................TGTATTCATCATTATCGTCATTGGGT........26150.8012000000000000000000000000000500000000205000000000000000000000000
..................................................................TCACTCAGGAAAATTATCCCAAGGCTCT...........................................................................................................................................................................2830.672000010000000000000000000000000000000001000000000000000000000000
.......................................................................................................................................................................................................................................TGTATTCATCATTATCGTCATTGGG.........25150.6710000010000000000000000000000800000000100000000000000000000000000
...........................................................................................................................................................................................................................................TTCATCATTATCGTCATTGGGTACCGG...27140.649001040000000000000000000000000000000004000000000000000000000000
.......TAATCATCTGCTGAATTGCTTGAAGGGC......................................................................................................................................................................................................................................2880.635000000000000000000000000000100000000202000000000000000000000000
........................................................................................................................................................TCACTATTCAATCTACAGCCAGTCGA.......................................................................................26160.569000010000000000000000000000400000000202000000000000000000000000
...............................................................................................................................................................TCAATCTACAGCCAGTCGACA.....................................................................................21160.508000010000000000000000000000000000000007000000000000000000000000
.......TAATCATCTGCTGAATTGCTTGAAGG........................................................................................................................................................................................................................................2680.504000010000000020000000000000000000000001000000000000000000000000
............................................................................................................AACGTTATGACAAGCCTACACTT......................................................................................................................................2320.501000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................TGAACGTTATGACAAGCCTACACTTACA...................................................................................................................................2820.501000010000000000000000000000000000000000000000000000000000000000
..........................................................................................................TGAACGTTATGACAAGCCTACACTTA.....................................................................................................................................2620.501000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................TTCATCATTATCGTCATTGGGTA.......23150.477000040000000000000000000000100000000002000000000000000000000000
..............................................................................................TGCTCGTTTAAGTGAACGTTATGACA.................................................................................................................................................26130.385000010000000000000000000000200000000200000000000000000000000000
...........................................................................................................................................................................................................................................TTCATCATTATCGTCATTGGGT........22160.386000030000000000000000000000000000000003000000000000000000000000
.......................................................................................................................................................................................................................................TGTATTCATCATTATCGTCATTGGGTAC......28140.365000000000000000000000000000100000000400000000000000000000000000
..................................................................TCACTCAGGAAAATTATCCCAAGGC..............................................................................................................................................................................2530.331000000000000000000000000000000000000100000000000000000000000000
..................................................................TCACTCAGGAAAATTATCCCAAGGCTA............................................................................................................................................................................2730.331000010000000000000000000000000000000000000000000000000000000000
..................................................................TCACTCAGGAAAATTATCCCAAGG...............................................................................................................................................................................2430.331000000000000000000000000000000000000001000000000000000000000000
........................................................................................................................................................TCACTATTCAATCTACAGCCAGTCGAC......................................................................................27160.315000000000000000000000000000100000000004000000000000000000000000
.......................................................................CAGGAAAATTATCCCAAGGCTC............................................................................................................................................................................22110.273000000000000000000000000000000000000003000000000000000000000000
............................................................................................................................................................TATTCAATCTACAGCCAGTCGACAAAC..................................................................................27160.254000020000000000000000000000000000000101000000000000000000000000
................................................................................TATCCCAAGGCTCTTGCTCGTTTAAG...............................................................................................................................................................26100.202000000000000000000000000000000000000002000000000000000000000000
........................................................................................................................................................................................................................................GTATTCATCATTATCGTCATTGGGTAC......27150.203000000000000000000000000000300000000000000000000000000000000000
...............................................................................................................................................................TCAATCTACAGCCAGTCGACAA....................................................................................22160.193000010000000000000000000000000000000002000000000000000000000000
............................................................................................................................................................TATTCAATCTACAGCCAGTCGACAAA...................................................................................26160.193000010000000000000000000000000000000101000000000000000000000000
........................................................................................................................................................TCACTATTCAATCTACAGCCAGTCG........................................................................................25160.193000010000000000000000000000200000000000000000000000000000000000
...............................................................................................................................................................TCAATCTACAGCCAGTCGACAAA...................................................................................23160.193000010000000000000000000000000000000002000000000000000000000000
........................................................................................................................................................TCACTATTCAATCTACAGCCAGT..........................................................................................23160.193000000000000000000000000000000000300000000000000000000000000000
..........................................................................GAAAATTATCCCAAGGCTC............................................................................................................................................................................19120.172000010000000000000000000000000000000001000000000000000000000000
........................................................................................................................................................................................................TGCGCAGTCTGCTGGACAATGCGT-C.......................................25130.152000010000000000000000000000000000000001000000000000000000000000
...........................................................................................................................................................................................................................................TTCATCATTATCGTCATTGGGTAC......24150.132000000000001000000000000000100000000000000000000000000000000000
...............................................................................................................................................................TCAATCTACAGCCAGTCGACAAACCGG--A............................................................................28160.132000000000001000000000000000000000000001000000000000000000000000
..............................................................................................................................................................TTCAATCTACAGCCAGTCGA.......................................................................................20160.132000000000000000000001000000000000000001000000000000000000000000
......TTAATCATCTGCTGAATTGCTTGAAGG........................................................................................................................................................................................................................................2780.131001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................TTCAATCTACAGCCAGTCGACAAACC.................................................................................26160.132000000000000000000000000000100000000001000000000000000000000000
.....TTTAATCATCTGCTGAATTGCTTGAAG.........................................................................................................................................................................................................................................2780.131000000000000000000000000000000000000001000000000000000000000000
........AATCATCTGCTGAATTGCTTGAAGGG.......................................................................................................................................................................................................................................2680.131000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................................................TCAATCTACAGCCAGTCGACAAACCGG--AC...........................................................................29160.132101000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................TCACTATTCAATCTACAGCCAGTC.........................................................................................24160.132000000000000000000000000000100000000001000000000000000000000000
............................................................................................................................................................TATTCAATCTACAGCCAGTCG........................................................................................21160.132000010000001000000000000000000000000000000000000000000000000000
......................................................................................................................................................................ACAGCCAGTCGACAAACCG................................................................................19180.112000000000000000000000000000000000000002000000000000000000000000
........AATCATCTGCTGAATTGCTTGAAG.........................................................................................................................................................................................................................................2490.111000000000000000000000000000100000000000000000000000000000000000
.......TAATCATCTGCTGAATTGCTT.............................................................................................................................................................................................................................................21100.101000000000000000000000000000000000000001000000000000000000000000
.....................................................................................CAAGGCTCTTGCTCGT....................................................................................................................................................................16110.091000000000000000000000000000000000000000000000000000000000000001
.AAAGTTTAATCATCTGCTGAA...................................................................................................................................................................................................................................................21120.081000000000000000000000000100000000000000000000000000000000000000
..............................................................................................TGCTCGTTTAAGTGAACGTTATG....................................................................................................................................................23130.081000000000000000000000000000000000000100000000000000000000000000
...............................................................................................GCTCGTTTAAGTGAACGTTATGACA.................................................................................................................................................25130.081000000000000000000000000000000000000100000000000000000000000000
.................................................................................................................................................................................ACAAACCGG--ACGGAAATCAGCTGCG.............................................................25130.081100000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................CTGCGCAGTCTGCTGGACA...............................................19130.081001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................TCAGCTGCGCAGTCTGCTGGACAATGCG..........................................28130.081000000000000000000000000000100000000000000000000000000000000000
.....................ATTGCTTGAAGGGCCCTGCCC...............................................................................................................................................................................................................................21130.081000000000000100000000000000000000000000000000000000000000000000
......................................................................................................................................................................................CCGG--ACGGAAATCAGCTGCGC............................................................21130.081010000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................AACCGG--ACGGAAATCAGCTGCGCAG..........................................................25130.081000000000000000000000000000000000000001000000000000000000000000
.............................................................................................TTGCTCGTTTAAGTGAACGTTATGACA.................................................................................................................................................27130.081000000000000000000000000000000010000000000000000000000000000000
...............................................................................................................................................................................................................TCTGCTGGACAATGCGT-CAGCCCTGT...............................26140.071000000000000000000000000000000000000100000000000000000000000000
.......................................................................................................................................................................................................................................TGTATTCATCATTATCGTCATTGGGTA.......27140.071000000000000000000000000000000000000100000000000000000000000000
..............................................................................................TGCTCGTTTAAGTGAACGTTA......................................................................................................................................................21140.071000000000000000000000000000100000000000000000000000000000000000
...............................................................................................................................................................................................................................................TCATTATCGTCATTGGGTACCGGAT.25140.071000000000000000000000000000000000000001000000000000000000000000
...............................................................................................................................................................................................................................T-CAGCCCTGTATTCATCATTATCGTCA..............27140.071000000000001000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................GTATTCATCATTATCGTCATTGGGTACC.....28150.071000000000000000000000000000100000000000000000000000000000000000
.................................................................................................................................................................................................................................CAGCCCTGTATTCATCATTATCGTCATT............28150.071000000000000000000000000000000000000001000000000000000000000000
......................................................................................................TAAGTGAACGTTATGACA.................................................................................................................................................18150.071000010000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................GTATTCATCATTATCGTCATTGGGTA.......26150.071000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................TTCATCATTATCGTCATTGGGTAAA.....25150.071000000000000000000000000000000000000001000000000000000000000000
......................................................................................................................................................................ACAGCCAGTCGACAAACCGG--ACGGAA.......................................................................26150.071000010000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................CATCATTATCGTCATTGGGTACCGG...25150.071001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................GTATTCATCATTATCGTCATTGGGT........25160.061000000000000000000000000000100000000000000000000000000000000000
....................................................................................................................................................................................................................................................ATCGTCATTGGGTACCGGA..19160.061001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................TCATCATTATCGTCATTGGGTACC.....24160.061000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................................................................CACTATTCAATCTACAGCCAGTCG........................................................................................24160.061000000000000000000000000000000000000001000000000000000000000000
.............................................................................................................................................................ATTCAATCTACAGCCAGTCGA.......................................................................................21160.061000000000000010000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................TTCATCATTATCGTCATTGGG.........21160.061000000000000000000000000000000000000001000000000000000000000000
.........................................................................................................................................................CACTATTCAATCTACAGCCAGTCGACAA....................................................................................28160.061000000000000000000000000001000000000000000000000000000000000000
............................................................................................................................................................TATTCAATCTACAGCCAGTCGACAAACC.................................................................................28160.061000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................................................................................................TCATTATCGTCATTGGGTAC......20160.061000000000000000000000000000000000000001000000000000000000000000
...........................................................................................................................................................CTATTCAATCTACAGCCAGTCGACA.....................................................................................25160.061000010000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................TTCATCATTATCGTCATTG...........19160.061000000000000000000000000000000000000001000000000000000000000000
........................................................................................................................................................TCACTATTCAATCTACAGCCAGTCGACAA....................................................................................29160.061000000000000000000000000000000000000100000000000000000000000000
...............................................................................................................................................................TCAATCTACAGCCAGTCGACAAACCG................................................................................26160.061000010000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................ATCGTCATTGGGTACCGG...18160.061000010000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................GTATTCATCATTATCGTCATTGGG.........24160.061000000000000000000000000000000000000001000000000000000000000000
..............................................................................................................................................................TTCAATCTACAGCCAGTCG........................................................................................19160.061000000000000010000000000000000000000000000000000000000000000000
................................................................................................................................................................CAATCTACAGCCAGTCGACAA....................................................................................21160.061000000000000000000000000010000000000000000000000000000000000000
............................................................................................................................................................TATTCAATCTACAGCCAGTCGACA.....................................................................................24160.061000000000000000000000000000000000000001000000000000000000000000
..........................................................................................................................................................ACTATTCAATCTACAGCCAGTCGAC......................................................................................25160.061000000000000000000000000000000000000001000000000000000000000000
..............................................................................................................................................................TTCAATCTACAGCCAGTCGAC......................................................................................21160.061000010000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................TATTCATCATTATCGTCATTG...........21160.061000000000000000000000000000000001000000000000000000000000000000
...........................................................................................................................................................................................................................................TTCATCATTATCGTCATTGGGTG.......23160.061000000000000000000000000000100000000000000000000000000000000000
......................................................................................................................................................................ACAGCCAGTCGACAAACCGG--A............................................................................21180.061000000000000010000000000000000000000000000000000000000000000000
........................................................................................................................................................................AGCCAGTCGACAAACCGG--A............................................................................19180.061000000000001000000000000000000000000000000000000000000000000000
droGri2
AGAAGTTTAACTATCTACTCAACTGCTTAAAGGGTGCTGCACTGGAGTGCGTGAAGGCATTTCCTGTCACCAATGAAAACTACGCTAAGGCATTAGAAAAATTAAAGTCTCGGTATGACAAGCCAGCATTGATATTTACAGAGACAATATCGCCAATTATTCAGTTGCCTTCAGCTAGTTCATCAA--ACGTTACTCAGCTACGGTCGTTAATTGATAATGCAT-CGGCATTATTTAGTTCACTTTCGTCCTTAGGCTCTGGCATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
........................................................................................................................................................................................................TACGGTCGTTAATTGATAATGCAT-C.......................................25170.06101
..........................................................................................................................CCAGCATTGATATTTACAGAGACAAT.....................................................................................................................26180.06101
..................................TGCTGCACTGGAGTGCGTGAAGGC...............................................................................................................................................................................................................24200.05101
droWil2
ACAAATTTAACTATCTAATAAGTTGTCTATCTGGCCAAGCTCTAAGCGTAGTCTCGCCATTTCAAATATCAGACGAAAATTATCCCAAGGCCCTAGAGCGCCTCAACGAGCGATATGACAAGAAAGTTCTTATTTTCGTAGAACATATTTCAAGTTTATTTAACATTGCTAGCATGAAAAAGGCAG--ACGCTGTTACCCTACGTACAATTTTGGATACGGTTT-CAGCTCTACGCGGATCATTAGTGTCTCTTGGGTCTGAAGCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................................TAAGCGTAGTCTCGCCATTTCAAATATCA..................................................................................................................................................................................................2930.33101000
..............................................................................ATTATCCCAAGGCCCTAGAGCGCCTC.................................................................................................................................................................26160.13202000
....................................................................................................................................................................................................ACCCTACGTACAATTTTGGATAC..............................................23200.05101000
.......................................................................................................................................TCGTAGAACATATTTCAAGTTTATT.........................................................................................................25200.05100010
.........................................................................................................................................................................TAGCATGAAAAAGGCAG--ACGCTGT......................................................................24200.05100010
..................TAAGTTGTCTATCTGGCCAAGCTC...............................................................................................................................................................................................................................24200.05101000
........................................................................................................................................................................CTAGCATGAAAAAGGCAG--ACGCTG.......................................................................24200.05101000
.............................................................................................................................................................................................................ACAATTTTGGATACGGTTT-CAGCT...................................24200.05101000
..........CTATCTAATAAGTTGTCTATCTGGC......................................................................................................................................................................................................................................25200.05101000
.......................................................................................................................................................................................................................ATACGGTTT-CAGCTCTACGCGGATC........................25200.05101000
..................................................................................................CGCCTCAACGAGCGATATGACAAGA..............................................................................................................................................25200.05101000
................................................................................................................................................................................................TGTTACCCTACGTACAATTTTGGATA...............................................26200.05101000
..............................................................................................................................................................................................................CAATTTTGGATACGGTTT-CAGC....................................22200.05101000
............................................................................................................................................................................................................TACAATTTTGGATACGGTTT-CAGCTC..................................26200.05100010
....................................................................................................................................................................................................ACCCTACGTACAATTTTGGATACGG............................................25200.05101000
.................................................................................................................................................................AACATTGCTAGCATGAAAAAGG..................................................................................22200.05101000
..........CTATCTAATAAGTTGTCTATC..........................................................................................................................................................................................................................................21200.05100010
.......TAACTATCTAATAAGTTGTCTATCT.........................................................................................................................................................................................................................................25200.05101000
.......TAACTATCTAATAAGTTGTCTATCTGGC......................................................................................................................................................................................................................................28200.05101000
..........CTATCTAATAAGTTGTCTATCTGGG......................................................................................................................................................................................................................................25200.05101000
...................................................................ATCAGACGAAAATTATCCCAAGGCCC............................................................................................................................................................................26200.05101000
.....................GTTGTCTATCTGGCCAAGCTCTAAGCG.........................................................................................................................................................................................................................27200.05101000
....................................................................................................................................................TTCAAGTTTATTTAACATTGCTAGCATG.........................................................................................28200.05101000
....................................................................................................................................................................................................ACCCTACGTACAATTTTGGATACGGTT..........................................27200.05101000
......................................GCTCTAAGCGTAGTCTCGCCATT............................................................................................................................................................................................................23200.05101000
dp5
AAAAGTTTAATTATTTGCTGACCTGCCTCACGGGGCCGGCATTAGATACAAATCAGGCATTCCAGGTTACAAGCGAAAACTATCCGAAGGCCCTAGCAAAACTCAAAAGCCGTTTTGATAATCCTACTCTTATATTTTTAGAAGATATTGAGGCATTGTTTGCACTACAACCTGTGGAAAGGTCAA--ACAGTCAGCAGCTTCACAGCCTAGGGGATAAGGCAT-CAGCTATATTAAGCTCGCTGGAGTCCATCGGCAAACCTGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................................................................................................................AGGTCAA--ACAGTCAGCAGCTTCA.............................................................2360.8350300000200
..........................................................................................................................................................................CCTGTGGAAAGGTCAA--ACAGTCAGCAGC.................................................................2860.3320000000020
.....................................................................................................................................................................TACAACCTGTGGAAAGGTCAA--ACAG.........................................................................2560.3320000000200
........................................................................GCGAAAACTATCCGAAGGCCCTAGCA.......................................................................................................................................................................2670.2920200000000
........................................................................GCGAAAACTATCCGAAGGCCCTAG.........................................................................................................................................................................2480.2520200000000
..................................................................................................................................................................................................................................................CTGGAGTCCATCGGCAAACCTGA2350.2010100000000
.......................TGCCTCACGGGGCCGGCATTAGATA.........................................................................................................................................................................................................................2550.2010100000000
...................................................................................................................................................................................AGGTCAA--ACAGTCAGCAGCTTCAC............................................................2460.1710100000000
...................................................................................................................................................................................AGGTCAA--ACAGTCAGCAGCTTC..............................................................2260.1710100000000
...............................................................................................................................................................TTGCACTACAACCTGTGGAAAGGTCA................................................................................2660.1710100000000
..........................................................................................................................................................................................................................................TAAGCTCGCTGGAGTCCATCGGC........2360.1710100000000
....................................................................................................................................................................CTACAACCTGTGGAAAGG...................................................................................1860.1710100000000
...............................................................................................................................................................TTGCACTACAACCTGTGGAAAGG...................................................................................2360.1710100000000
............................................................TCCAGGTTACAAGCGAAAACTATCCG...................................................................................................................................................................................2670.1410100000000
........................................................................................................................................................................................AA--ACAGTCAGCAGCTTCACAGC.........................................................2270.1410100000000
...........................................................TTCCAGGTTACAAGCGAAAACTATCC....................................................................................................................................................................................2670.1410100000000
...................................................................................................AACTCAAAAGCCGTTTTGATAATCC.............................................................................................................................................2570.1410100000000
.............TTTGCTGACCTGCCTCACGGGGC.....................................................................................................................................................................................................................................2370.1410100000000
...........................................................................................................................................................TTGTTTGCACTACAACCTGTGG........................................................................................2280.1310000000100
..........................................................................................................................................................ATTGTTTGCACTACAACCTGTGGA.......................................................................................2480.1310100000000
AAAAGTTTAATTATTTGCTGACCTG................................................................................................................................................................................................................................................2580.1310100000000
.......TAATTATTTGCTGACCTGCCTC............................................................................................................................................................................................................................................2280.1310100000000
..................................................................TTACAAGCGAAAACTATCCGAAGG...............................................................................................................................................................................2490.1110100000000
....................................................................ACAAGCGAAAACTATCCGAAGGC..............................................................................................................................................................................2390.1110100000000
........................................................................GCGAAAACTATCCGAAGGCCCT...........................................................................................................................................................................2290.1110100000000
..................................................................TTACAAGCGAAAACTATCCGA..................................................................................................................................................................................2190.1110100000000
..................................................................TTACAAGCGAAAACTATCCGAAGGC..............................................................................................................................................................................2590.1110100000000
.........................................................................CGAAAACTATCCGAAGGCC.............................................................................................................................................................................1990.1110100000000
droPer2
AAAAGTTTAATTATTTGCTGACCTGCCTGACGGGGCCGGCATTAGATACAATTCTGGCATTCCAGGTTACAAGCGAAAACTATCCGAAGGCCCTAGCAAAACTCAAAAGCCGTTTTGATAATCCTACTCTTATATTTTTAGAAGGTATTGAGGCATTGTTTGCACTACAACCTGTGGAAAGGTCAA--ACAGTCAGCAGCTTCACAGTC---------AGGCAT-CCGCTATATTAAGCTCGCTGGAGTCCATCGGCAAACCTGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................CAAAACTCAAAAGCCGTTTTG....................................................................................................................................................21110.091010000
........................................................................................................AAAAGCCGTTTTGATAATCCT............................................................................................................................................21160.061010000
.........................................................................CGAAAACTATCCGAAGGCCCT...........................................................................................................................................................................21200.051010000
droAna3
AGAAATTTAATCATTTAACTTCTTGCCTCCCTGGTGAAGCCTTAGGAACTGTCAAGGCATTCCAGGTCACCGAGAGTAATTATGACAAAGCTATCGCTAGTCTAAAAAAAGTTTATGATAACGAATGTCTCATCTTTGCGAACCAAATACGTCAACTGTTCAGCCTTCCGAAAATTT--------------------CGTTGAGGGGTCTCATCGACACTGTGT-CATCAATTTATGGATCACTATTATCCATAGGAGATGATACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................TTAGGAACTGTCAAGGCATTCCAGG.......................................................................................................................................................................................................25200.102200000
.........................................................................................................................................................................................................GAGGGGTCTCATCGACACTGTGT-CAT.....................................26200.051001000
.......................................................................................................................................TTGCGAACCAAATACGTCAACTGTT.........................................................................................................25200.051010000
.........................................................................GAGTAATTATGACAAAGCTATCGCTAG.....................................................................................................................................................................27200.051100000
..............................................................................................................................................................................................................................GT-CATCAATTTATGGATCACTATTATC...............27200.051100000
....................................................................................................................................................ACGTCAACTGTTCAGCCTTCC................................................................................................21200.051010000
.........................................TTAGGAACTGTCAAGGCATTCC..........................................................................................................................................................................................................22200.051010000
........................................................................AGAGTAATTATGACAAAGCTATCG.........................................................................................................................................................................24200.051100000
droBip1
AAAAATTTAATCACCTGTTGTCATGTCTGGAGAAAGAAGCGTTGGGGACCGTGAAAGCATATCAAATAACTGAGACCAATTACCCAAAGGCACTAGCCGCCTTAAATCGGGTGTACGACAATCAGTGTTTAATTTTTTTTGATTGTATCTCACGCCTCTTCGACATTCCCTCAATGCAGGGTCCGT--CCGCCTTATCACTACGTCACATGATAGATACTGTCTACAGCTATCTACGAATCCTTGCTTTCACTAGGCAGTGACAASizeHit CountTotal NormTotal
No Reads
droKik1
AGAAATTTAATCAGTTGCTAAATTGTCTACGTGGATCAGCTCTTGAAACGGTTAAGGCATTCCAAGTTACACCTGAAAACTACGCAAAGGCTCTTTAGCGTCTAAAGAGTCGTTATGACAACCCAACCCTAGTTTTTCTGGACAATATATCGTCGCTATTCAATTTGCCAAATGTTGCGAAATCCA--ATAGCCAAACGTTGCGCAGCCTTATTGACAATGCAA-CGGCATTGTTTAACTCGTTA--------------------SizeHit CountTotal NormTotal
No Reads
droFic1
AAAAATTCAATCAGCTTATCAGTTGCTTGTCTGGAGCAGCTTTAGAGACGGTTAAGGCCTTTCAAATCACTCCCGATAATTACCCAAAGGCTCTCGAGCGCCTTAAGGAGCGCTACGATAACCCCACTCTGGTATTTTTAGATAGTATATCATCCTTGTTCAACCTGCCAGCCGTTACTAAACCAA--ATAGCAACCAACTCCGTAGCCTAATAGATAATGCAG-CCGCCCTATATAATTCGCTGAGGTCACTGGGCTCTGACTCSizeHit CountTotal NormTotal
No Reads
droEle1
AGAAGTTTAACCATCTCATAAACTGTCTCCGAGGTGCTGCCCTAGAAGCCGCCAGGGCGTTTCAGGTCACACATGAAAATTACGGTAAGGCTTTACTACGCATCCAAATCCGATACGATAATCCTACAATTGTATTTTTGGACAACATTACGTCACTGTTCAACTTGCCAAGTGTGTCCATGACAACAAT-----GGTGGTGCGCAGCCTAGTCGACAACCCGT-CGGCATTATTAAACTTCCTGC---------GTCTCTAAGASizeHit CountTotal NormTotal
No Reads
droRho1
AAAAATTCAATCAGCTTATCAGTTGCTTATCTGGAGCAGCTTTAGAGACAGTAAAGGCCTTTCAAATTACTCCCGACAACTACCCAAAGGCTCTCGAGCGCCTCAAGGAGCGCTATGATAACCCCACTCTGGTATTTTTAGATAGCATATCATCCTTGTTCAACCTGCCAGCCGTTACCAAACCAA--ATAGAAACCAACTTCGTAGCCTAATAGATAATGCAG-CCGCCCTATATAACTCGTTGAAGTCATTGGGCTCTGAATCSizeHit CountTotal NormTotal
No Reads
droBia1
AGAAATTGAATCAATTGCTAAATTGTTTACGTGGATCAGCTCTTGAAACTGGTAAGGCTTTCCAAGTTACGTCCGAAAATTACGCAAAGGCTCTCGAGCGCCTAAAGAGTCGTTATGACAACCCCACCCTTGTCTTTTTGGATAATATATCGTCGCTATTCAATTTACCGAAGTTTGCGAAATCAA--ATAGATAAACGTTGCGCAGCCTTATTGACAATGCAT-CGGCATTGTTTAACTCGTTTTTATCCCTTGGGAGTGAAACSizeHit CountTotal NormTotal
No Reads
droTak1
AAAAATTCAATCAGCTTATCAGTTGCTTATCTGGAGCAGCTTTAGAAACAGTAAAGGCTTTTCAAATTACTCCCGATAACTACCCAAAGGCTCTTGAGCGCCTTAAGGAGCGCTATGATAACCCCACTCTGGTATTTTTAGATAGCATATCATCCTTGTTCAACCTGCCAGCCGTTACCAAACCAA--ATAGTAACCAACTTCGTCG------------------CCGCTCTATATAACTCGCTGAGGTCATTGGGCTCTGAATCSizeHit CountTotal NormTotal
No Reads
droEug1
ACAAATTTAATCATCTCCGTAATTGTTTAAAGGGACCTGCACTGGAAGCTGTCGCAGCCTTTCCGGTCACTGGAGAAAATTATGCGAAGGCGCTGGAACGGCTGAAGGACCGGTATGACAAGCCTGCCCTAATCTTTGTCGAAACGATAGCCTCGATTTTTAAACTGCCGCCGGCTGCTGCGGCAA--GTGCTCAACAGCTCCGCAGCCTAATCGACAACGCAT-CCGCGTTATATAGTGCCCTTTCATCGCTAGGCTCGGACGCSizeHit CountTotal NormTotal
No Reads
droSim2
AGAAGTTCAACCAGTTGTTAAACTGTCTTCGAGGACCAGCCCTTGAAACGGTTCGAGCTTTCCAGGTGACCGCAGACAACTACACAAAGGCTCTGGACCGCTTAAAGCAGCGCTATGACAACCCGACTCTCGTATTTTTGGATAACATATCGTCACTCTTCGCATTGCCAACTGTCGCCAAGTCAA--ATGGTCAGCAGTTGCGCAGCCTAATCGATAATGCAT-CCGCATTATACAACTCGTTGCGTTCGTTGAGCACCGAGCCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
droYak3
AGAAGTTCAACCAGTTGTTAAACTGTCTTCGAGGACCAGCCCTTGAAACGGTTCGAGCTTTCCAGGTGACCGCAGACAACTACACAAAGGCTCTGGACCGCTTAAAGCAGCGCTATGACAACCCGACTCTCGTATTTTTGGATAACATATCGTCACTCTTCGCATTGCCAACTGTCGCCAAGTCAA--ATGGTCAGCAGTTGCGCAGCCTAATCGATCATGCAT-CCGCATTATACAACTCGTTGCGTTCGTTGAGCACCGAGCCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................TTCGAGGACCAGCCCTTGAAACGGTT....................................................................................................................................................................................................................26202.1042010000000041
.............................CGAGGACCAGCCCTTGAAACGGTT....................................................................................................................................................................................................................24200.6513000000000013
...........................TTCGAGGACCAGCCCTTGAAACGGTTCT..................................................................................................................................................................................................................28200.5010000000000010
.........................................................................................................................................................................................................................................TACAACTCGTTGCGTTCGTTGAGCACC.....27200.40802300000003
..........................................................................GACAACTACACAAAGGCTCTGGACC......................................................................................................................................................................25200.40806200000000
.........................................................................................................................................TTGGATAACATATCGTCACTCTTCGC......................................................................................................26200.30605001000000
..........................................................................GACAACTACACAAAGGCTCTGGA........................................................................................................................................................................23200.20402000000002
...........................................................................................................................................GGATAACATATCGTCACTCTTCGCA.....................................................................................................25200.15303000000000
..................TAAACTGTCTTCGAGGACCAGCCCTT.............................................................................................................................................................................................................................26200.10201100000000
.....................................................................................................................................................................TGCCAACTGTCGCCAAGTCAA--ATGGTC.......................................................................27200.10202000000000
...............TGTTAAACTGTCTTCGAGGACCAGCCCT..............................................................................................................................................................................................................................28200.10202000000000
...........................................................................ACAACTACACAAAGGCTCTGGACC......................................................................................................................................................................24200.10202000000000
..........................................................................GACAACTACACAAAGGCTCTGG.........................................................................................................................................................................22200.10202000000000
...............................................................................................................................................................................................................................................TCGTTGCGTTCGTTGAGCACCGAGC.25200.10201010000000
..............................................................................ACTACACAAAGGCTCTGGACCGCT...................................................................................................................................................................24200.05100000010000
..........................................................................................................................................................ACTCTTCGCATTGCCAACTGTCGCC......................................................................................25200.05101000000000
......................................................................................................TAAAGCAGCGCTATGACAACCCGACTC........................................................................................................................................27200.05101000000000
...............TGTTAAACTGTCTTCGAGGACCAGCC................................................................................................................................................................................................................................26200.05101000000000
..........................................................................GACAACTACACAAAGGCTCTGGAC.......................................................................................................................................................................24200.05101000000000
.......................................................................................................................................................................................................................................TATACAACTCGTTGCGTTCGTTGAGC........26200.05100100000000
..................TAAACTGTCTTCGAGGACCAGCCCT..............................................................................................................................................................................................................................25200.05101000000000
......................................................................................................TAAAGCAGCGCTATGACAACCCGAC..........................................................................................................................................25200.05101000000000
....................................................................ACCGCAGACAACTACACAAAGGC..............................................................................................................................................................................23200.05101000000000
......................................................................................................................................TTTTTGGATAACATATCGTCACTCTT.........................................................................................................26200.05101000000000
...........................................................................................................................................GGATAACATATCGTCACTCTTCGC......................................................................................................24200.05101000000000
..........................................................................................................................................................................................................................................ACAACTCGTTGCGTTCGTTGAGCACC.....26200.05101000000000
.................................................................................................................................................................................CCAAGTCAA--ATGGTCAGCAGTT................................................................22200.05101000000000
....................AACTGTCTTCGAGGACCAGCCCT..............................................................................................................................................................................................................................23200.05101000000000
....................................................................................................................................................................TTGCCAACTGTCGCCAAGTCAA--ATGG.........................................................................26200.05101000000000
........................................................................CAGACAACTACACAAAGGCTCTGG.........................................................................................................................................................................24200.05101000000000
.................................................GGTTCGAGCTTTCCAGGTGA....................................................................................................................................................................................................20200.05101000000000
....................................................TCGAGCTTTCCAGGTGACCGCAGA.............................................................................................................................................................................................24200.05100100000000
............................................................TCCAGGTGACCGCAGACAACTACACA...................................................................................................................................................................................26200.05101000000000
......................................................GAGCTTTCCAGGTGACCGCAGACAAC.........................................................................................................................................................................................26200.05101000000000
..................TAAACTGTCTTCGAGGACCAGCCCTTG............................................................................................................................................................................................................................27200.05101000000000
...............TGTTAAACTGTCTTCGAGGACCAGCCC...............................................................................................................................................................................................................................27200.05100100000000
.....................................................CGAGCTTTCCAGGTGACCGCAGACAAC.........................................................................................................................................................................................27200.05101000000000
........................................................................CAGACAACTACACAAAGGCTCTGGACC......................................................................................................................................................................27200.05101000000000
..................TAAACTGTCTTCGAGGACCAGCCCTTGA...........................................................................................................................................................................................................................28200.05101000000000
...........................................TGAAACGGTTCGAGCTTTCCAGGTGA....................................................................................................................................................................................................26200.05100000010000
....................................................TCGAGCTTTCCAGGTGACCGCA...............................................................................................................................................................................................22200.05101000000000
..............................................................................................................................................TAACATATCGTCACTCTTCGCATTGCCA...............................................................................................28200.05101000000000
....................................................................................................................................................................................................................................CATTATACAACTCGTTGCGTTCGT.............24200.05101000000000
........................................................................CAGACAACTACACAAAGGCTCT...........................................................................................................................................................................22200.05101000000000
......................CTGTCTTCGAGGACCAGCCCTTGAA..........................................................................................................................................................................................................................25200.05101000000000
......................CTGTCTTCGAGGACCAGCCCTTGAAA.........................................................................................................................................................................................................................26200.05101000000000
.....................................................................................................................................................................TGCCAACTGTCGCCAAGTC.................................................................................19200.05101000000000
............................................................................CAACTACACAAAGGCTCTGGAC.......................................................................................................................................................................22200.05101000000000
droEre2
AGAAGTTCAACCAGTTGTTAAACTGTCTTCGAGGATCCGCCCTTGAAACGGTTCGGGCTTTCCAGGTGACCGCAGACAACTACACAAAGGCTCTGGACCGCTTAAAGCAGCGCTATGACAACCCCACTCTCGTATTCTTGGATAACATATCGTCACACTTCGCATTGCCAACTGTCGCCAAGTCAA--ATGGTCAGCAGTTGCGCAGCCTAATCGATAATGCAT-CCGCATTATACAACTCGTTGCGATCGTTAAGCACCGAGG-SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.GAAGTTCAACCAGTTGTTAAACTGTC..............................................................................................................................................................................................................................................2620.5011000000

Generated: 05/18/2015 at 01:08 AM