ID:

dmo_1716

 Coordinate:

scaffold_6500:30157725-30157875 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-22.9 -22.9 -22.5

Flybase annnotation

exon [dmoj_GLEANR_17673:2]; CDS [Dmoj\GI16901-cds]; intron [Dmoj\GI16901-in]

Repeatable elements

NameClassFamilyStrand
Helitron1_DmojRCHelitron+
mature
  1. scaffold_220:1249-1274 -
  2. scaffold_1882:2280-2305 -
  3. scaffold_4183:5806-5831 -
  4. scaffold_6100:8920-8945 -
  5. scaffold_6103:87149-87174 -
  6. scaffold_6410:33513-33538 -
  7. scaffold_6411:2782-2807 -
  8. scaffold_6429:13357-13382 -
  9. scaffold_6477:953-978 -
  10. scaffold_6482:1915388-1915413 -
  11. scaffold_6482:1983579-1983604 -
  12. scaffold_6498:1217816-1217841 -
  13. scaffold_6498:1397508-1397533 -
  14. scaffold_6498:2531863-2531888 -
  15. scaffold_6498:2635110-2635135 -
  16. scaffold_6500:29819164-29819189 -
  17. dmo_1716  scaffold_6500:30157826-30157851 -
  18. scaffold_6500:30982984-30983009 -
  19. scaffold_6540:720734-720759 -
  20. scaffold_6680:22973834-22973859 -
  21. scaffold_26:4662-4687 +
  22. scaffold_49:3175-3200 +
  23. scaffold_3768:2258-2283 +
  24. scaffold_4005:7004-7029 +
  25. scaffold_4007:33520-33545 +
  26. scaffold_4337:468-493 +
  27. scaffold_4716:3695-3720 +
  28. scaffold_5677:354-379 +
  29. scaffold_6318:47835-47860 +
  30. scaffold_6356:72898-72923 +
  31. scaffold_6356:74267-74292 +
  32. scaffold_6379:41769-41794 +
  33. scaffold_6393:34968-34993 +
  34. scaffold_6482:1795614-1795639 +
  35. scaffold_6489:36299-36324 +
  36. scaffold_6498:2064500-2064525 +
  37. scaffold_6498:2229512-2229537 +
  38. scaffold_6501:327756-327781 +
  39. scaffold_6501:347851-347876 +
  40. scaffold_6541:904159-904184 +
star

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TCAATAGCGCCGAAATAGATTGCGTTCATACGGACAGACGGACGGACAGCAGGACGGACATTGCACAAAACCAATATACTCATTTCACTTTCGTGAATGAGTATAAAAATCTTTAGTCGGGACACTCGACAACTGATATTTGAATCTATAGTAAAAATTAACACATTTTGAACACTTATATTCATAATAAATTTTTTTTAGGACCTTTCGTTCATTCAACTTAAAAAAAAAATCATCTACTTTGGGAATTC
**************************************************........................((((((((((.(((....)))))))))))))...(((....((((((...))))))....)))..............((((((.......(((.((((........)))).)))......)))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 M060
embryo
 V056
head
 V049
head
..........................................................................TATACTCATTTCACTTTCGTGAATGA....................................................................................................................................................... 26 0 20 7.15 143 143 0 0 0 0
...............................................................................................................................................................................................................................AAAAAAAAATCATCTACTTTGGGA.... 24 0 1 1.00 1 1 0 0 0 0
......................................................................................................................................................................................................................................AATCATCTACTTTGGGAAT.. 19 0 1 1.00 1 1 0 0 0 0
....................................GACGGACGGACAGCAGGACGGA................................................................................................................................................................................................. 22 0 3 0.33 1 0 1 0 0 0
.....................................ACGGACGGACAGCAGGACGGA................................................................................................................................................................................................. 21 0 3 0.33 1 1 0 0 0 0
....................................GACGGACGGACAGCGGGACGG.................................................................................................................................................................................................. 21 1 6 0.33 2 0 2 0 0 0
........................................GACGGACAGCAGGACGGACA............................................................................................................................................................................................... 20 0 5 0.20 1 0 0 1 0 0
.....................................ACGGACGGACAGCGGGACGG.................................................................................................................................................................................................. 20 1 6 0.17 1 0 0 0 1 0
...............................................AGCGGGACGGACATTGCAC......................................................................................................................................................................................... 19 1 7 0.14 1 0 0 0 0 1
..................................................................................................................................................................................................................TTCATTCAACTTTTAAAAAAA.................... 21 2 8 0.13 1 1 0 0 0 0
................AGATTGCGTTCATACGGACAGACG................................................................................................................................................................................................................... 24 0 20 0.10 2 2 0 0 0 0
........................................GACGGACAGCAGGACGGACG............................................................................................................................................................................................... 20 1 16 0.06 1 0 1 0 0 0
...ATAGCGCCGAGATAGATTGCG................................................................................................................................................................................................................................... 21 1 20 0.05 1 1 0 0 0 0
......................................CGGACGGACGGCAGGACGGA................................................................................................................................................................................................. 20 1 20 0.05 1 1 0 0 0 0
............................TACGGACAGACGGACGGACAGC......................................................................................................................................................................................................... 22 0 20 0.05 1 1 0 0 0 0
.....................................ACGGACGGACGGCAGGACG................................................................................................................................................................................................... 19 1 20 0.05 1 1 0 0 0 0

Anti-sense strand reads

AGTTATCGCGGCTTTATCTAACGCAAGTATGCCTGTCTGCCTGCCTGTCGTCCTGCCTGTAACGTGTTTTGGTTATATGAGTAAAGTGAAAGCACTTACTCATATTTTTAGAAATCAGCCCTGTGAGCTGTTGACTATAAACTTAGATATCATTTTTAATTGTGTAAAACTTGTGAATATAAGTATTATTTAAAAAAAATCCTGGAAAGCAAGTAAGTTGAATTTTTTTTTTAGTAGATGAAACCCTTAAG
**************************************************........................((((((((((.(((....)))))))))))))...(((....((((((...))))))....)))..............((((((.......(((.((((........)))).)))......)))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 M060
embryo
 V110
male body		 V049
head
 V041
embryo
.......................................................................................................................................................................................................................................TAGTAGTTGAAACCATTGAG 20 3 20 1.15 23 15 0 8 0 0
...................................................CCTGCCTGTAACGTGTTTTGGTTATAT............................................................................................................................................................................. 27 0 20 0.45 9 0 8 0 0 1
.............................TGCCTGTCTGCCTGCCCGTCGTCCT..................................................................................................................................................................................................... 25 1 5 0.20 1 0 1 0 0 0
.......................................................CCTGTAACGTGTTTTGGTTATAT............................................................................................................................................................................. 23 0 20 0.15 3 0 0 3 0 0
....................................................CTGCCTGTAACGTGTTTTGGTTATA.............................................................................................................................................................................. 25 0 20 0.15 3 3 0 0 0 0
....................................................CTGCCTGTAACGTGTTTTGGT.................................................................................................................................................................................. 21 0 20 0.10 2 0 0 2 0 0
...................................................CCTGCCTGTAACGTGTTTTGGTTA................................................................................................................................................................................ 24 0 20 0.10 2 0 2 0 0 0
.....................................................TGCCTGTAACGTGTTTTGGTTATA.............................................................................................................................................................................. 24 0 20 0.10 2 2 0 0 0 0
....................ACGCAAGTATGCCTGTCTGCC.................................................................................................................................................................................................................. 21 0 20 0.10 2 2 0 0 0 0
.........................................................................................................................................................................................................................................GGAGATGTGACCCTTAAG 18 3 20 0.10 2 2 0 0 0 0
................................................................................................................................................................................................................................TGTTATTTAGTAGATGAAA........ 19 2 11 0.09 1 0 0 0 1 0
..........................................................................................................................................................................................................TGGAATGGAAGTAACTTGAA............................. 20 3 13 0.08 1 0 0 0 1 0
...................................................CCTGCCTGTAACGTGTTTTGGTTTT............................................................................................................................................................................... 25 1 20 0.05 1 0 1 0 0 0
...................................................CCTGCCTGTAACGTGTTTTGGTTATA.............................................................................................................................................................................. 26 0 20 0.05 1 0 1 0 0 0
....................................................CTGCCTGTAACGTGTTTTGGTTAT............................................................................................................................................................................... 24 0 20 0.05 1 1 0 0 0 0
........................................................CTGTAACGTGTTTTGGTTATA.............................................................................................................................................................................. 21 0 20 0.05 1 0 0 1 0 0
...................................................CCTGCCTGTAACGTGTTTTGG................................................................................................................................................................................... 21 0 20 0.05 1 0 1 0 0 0
...................................................CCTGCCTGTAACGTGTTTTGGTTAT............................................................................................................................................................................... 25 0 20 0.05 1 0 1 0 0 0
..........................GTATGCCTGTCTGCCTGCCTGTCGT........................................................................................................................................................................................................ 25 0 20 0.05 1 1 0 0 0 0
...................................................................................AAGTGAAAGCACTTACTCATATTTTT.............................................................................................................................................. 26 0 20 0.05 1 0 1 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6500:30157675-30157925 - dmo_1716 TCAATAGCGCCGAAATAGATTGCGTTCATA----CGGACAGACGGACGGACAGCAG--------GA----CGGACATTGCACAAAACCA----------------------------ATAT--------------------------------------------------------------------ACTCATTTCACT-------TTCGTG-AA-TGAGTATAAAAATCT-----------TTAGTCGGGACACTCGACAACTGA-----TATTT-------GAAT--------------------------------------------------------------------------------CTATAGTAAAAATTAACACATTTTGAACACTTATATTCATAATAAATTTTT-----------TTT-AGGACC-TTT--------------------------------------------------CGTTCATTC--AACTT-----------------------------------------------------------------------AA---------A-------------------------AAAAAAATCATCTACTTTG---------------------GGA-AT---TC
droVir3 scaffold_12800:155417-155658 + TTTATAACTATTAAGATCT-TGCGTTCATACATACGGACGGACGGACGGACGGACGGACGCACAGACAGACGGACATGGC-TAGATTAACTTGGCTATTGATGCTGAACAAGAATATATATACTTTGTGTGGTCGGAAAAGGTTCCTTCTACCTGTTACATACATTTACATTTTGCACAAATACAATATACCATTTT-CTCCATTTTCAATGGGTTC----------------------------------------------------------------------------------AGGGTATAGAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAAGCT----------------------------------------------------------------------------------------------------------TCCTT-------------------------------GG
droGri2 scaffold_15203:10962688-10962954 - TTAAGGGTGTCGAGCAAAGATGCCTTCATA----CAGACGGACAGACAGCAT------------GA----CGGACATTCCACAAAACCA----------------------------ATAT--------------------------------------------------------------------ACAATGAT-ACC-------TTCGGC-ATCAGAGTATAAAAATCTAAAAAGAAA----------------------CTGG-----TATTG------ATCATA--------------------------CCCT------------------------------------------------------ATACAAATTAAAAAGA-----------------AGT----------GAACAGTTTTTTT-TATTAACT-TGTGCAAATGTTATGAGCAAGAATACTTTTGCT------------------TCGTGCATAC--AAATTGAA---A------------------------------------------------AAGTTTATTGTC-----G----------ACTGG-GAAG-----------------------------------------AATATATTATTGT-----CG---TC
droWil2 scf2_1100000004953:118637-118861 - CTTATAGTCTCCGAGATCTAGGTGTTCATA----CGGACAGACGGACGGAC------------AGA----CGGACATGGC-TAGATCGACTCGGTTTTTGATCCTGATCAAGAATATATATACTTTGT-CGGTCGGAGATGCTTCCTTCTGCCTGTTACATACA-------TTTTGGCGACTTTAATATACCATTTC-ACCC------TATGGGTGT-ATGGTATAATT---------------------------------------------------------------------------------AT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATT---AAAAAACAAA------------------------------------------------------------------------------------------------------TTATTTTCGTTG----------------------CA-AA---TT
dp5 Unknown_singleton_3400:1736-1990 - TTTATAGTCTTTGAGCACTAGGCGCTGATA----GGGACGGACAGACGGGCGGACGGACAGACAGA----CAGACAG-----------ACTCATT------------------------------------------------------------------------------------------------------------------TTGAGTAT-CGGGTATAATTAGTT-----------GTTGGCAGAACAAT----------------GGTA------ATAGCA--------------------------AATA------------------------------------------------------ATA----------------------------------------------------------------------------------------ACATTTTTGGTGAATTATTACAAAAATATTCGTGTATGCATAAACTGGA---A------------------------------------------------AGAGTCATTGCATATGTATTGAG---G-TTTATTCAAATTAAAACCAAAAAGAAAGAATTTCCTTCATTTTT---------------------GAC-AG---TG
droPer2 scaffold_6151:656-789 + CTTATAGTCTTTGAGCATTAGGCGCTGAAG----GGGACGGACAGACGGACAGACGGACGGACGGA----CGGACACA-----CATCCACTTTT-------------------------------------------------------------------------------ACCACAAATCTAATATACCCCAAT-ACTCAT----TTTGAGTAT-CGGGTATAATA---------------------------------------------------------------------------------AC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C
droAna3 scaffold_13339:196806-197059 - TTAAAACTGAGAGACTAGTTTGCGTAGAAA----CAGACAGACGGACAGACGGACCGACGGACAGA----CGGACATGCT-CATATCGACTCAGGAGGTGATCCTGATCAAGAATATATATACTTTATAGGGTCAGAGATGTCTCCTTCACTGCGTTGCACACT-------TTTGA----------------------------------------------------------------------------------------CCAA------------AATTATAATACCCTCTGCAAGGGTATAAAAATATGC--------------------------------------------------------------------------------------------------------------TGATCGT-TTTTAACTATC--------------------------------------------------TATTCAT--------------------------------------------------------------------------------TG---------A-------------------------AATGAAATTTGGTGTTTTC---------------------AGA-AT---TC
droBip1 scf7180000396610:144-415 - TCAAAACTGAGAGACTAGTTCGCGTAGAAA----CAGACAGACGGACAGACAGACGGACAGACAGA----CGGACATGCT-CATATCAACTCAAGAGGTGATCCTGATCAAGAATGTATATACTTTATAGGGTCGGAGATGTCTCCTTCACTGCGTTGCACACT-------TTTGA----------------------------------------------------------------------------------------CCAA------------AATTATAATACCCTCTGCAAGGGTATAAAAATAC-----CAT--------------------------------------------------------------------------------------------------------------------AA------------------------------------------------------------------------------------ATTCCTAAAATTTAT----GTAAAATTTTAATTTCTTTCT------------------AA-TGAG----A-------------------------AAAAAAATAAATAAATTCA---------------------AAA-AT---AG
droKik1 scf7180000301688:7073-7276 - TTAAAACTGAGGGACTAGTTTGCGTAGAAA----CAGACAGACGGACAGACAGACAGACGGACAGA----CGGACATGGC-TAGATCGACTCGGCTGTTGATGCTGATCAAGAATATATATACTTTATAGGGTCGGAAACGT------------------------------------------------------------------------------------------------------------------------------------------------AATAACC--TGCAAGGGTATAAAAATCAG---------------------------------------------------------------AT----------TTTAAA-------ATACAAAATAATATTTT-----------TCT-AAGTGC-CTT--------------------------------------------------CACTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------AT
droFic1 scf7180000454038:805837-806011 + AAA--ACTTATAGACAAA---ACATT----------AACCACCAAACTTTAAACG---------------------------------------------------------------------------------------------------------------------------------------------------------------TAA-CTTCTATAATA----------AAACTTTTATC----------------------------------AAAATAACTTTCGTAAA---------------------------------------------------------------------------------------TA-----------------AAT----------AATTGCTTTTTGT-TATCAAAT-TTCCAAAA-----------------------------------------------------------------------------------TATAACTGCTTTAAATTGAAACTTCTTTCT------------------AA---------A-------------------------AAAAAAATCATTTACTTCC---------------------TAA-AT---TT
droEle1 scf7180000486474:1345909-1346052 - TA--------------------------------CGGACAGAAAGGCGGGCAGGCGGACGGACAGA----CGGACATAAC-TAGATCGACTCTTCTA-----GCTGATCTAGAATATAT-TACTTTATAGGGTCGGGACGG---------------------------------AA----------------------------------------------------------------------------------------CTGA------------AATTATAAT-------GCAAGTGTATAAAAATAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACT-----------------------TTT-------------------------------------------------------------------------------------------------------------A-AA---CA
droRho1 scf7180000776839:6030-6264 + TTAAAACTGAGAGACTAGTTTGCGTAGAAA----CAGACAGACG-----A----CAGACGGACAGA----CGGACATGGC-TATATCAACTCAGGAGGTGATCCTGATCAAGAATATATATACTTTATAGGGTCGGAGATGTCTCCTTCACTGCGTTGCACACT-------TTTGA----------------------------------------------------------------------------------------CCAA------------AATTATAATACCCTCTGCAAGGGTATAAT-------------------------------------------------------------------------------------------------AACAATATATTTTT--------------C---------------------------------------------------------------------GT----------------------------------------------AAACGTTTAG------ATTAACTTTAAATTAAATAA-A--------------------------------------------------------------------------G---AA
droBia1 scf7180000302055:27865-28107 - TTAAAACTGAGAGACTAGTTTGCGCAGAAA----CGGACGGACAGACGGA----CGGACGGACAGA----CGGACAAGGC-TAGATCAACTCGTCTTGTGACGCTGATCAAGAATATATATACTTTATGGGGTCGGAAACGTCTCCTTCACTGCGTTGAAAACT-------GCTGA----------------------------------------------------------------------------------------CTGA------------AATTATTATACCCTCTGCAAGGGTATAAT-------------------------------------------------------------------------------------------------AACAATATATTTTT-----------TTTC---------------------------------------------------------------------GT----------------------------------------------AAACGTTAAG------ATTAACTTTAAATTAAATAA-A--------------------------------------------------------------------------G---AA
droTak1 scf7180000414540:10837-11058 - TTTGTAGTTTCCGAGATCTCAGCGTTCATA----CAGACAGACAGACGGACAGAC--------AGA----CGGATACTTT-TAC--------------------------------------------------------------------------------------------ACGAATACAATATACCCTTTT-ACTC------TACGAGTAA-CGGGTATAAAA---------------------------------------------------------------------------------ACCCGCCCCTATAAAGCTTTTATTTTCATTTTTTAACTTTAAACATTTTATTTTTAAGCC-------------------------------------------------------------------------------------------------------------------------------------------------AAAAGTAAAAT------------------------------------------------------------------------------------------------------TTTTTAAGTGAAAATCGCATTTTTGACTTTGGGCTAT---CG
droEug1 scf7180000409739:21769-21887 - CTTATAGTTCCTGAGATCTCAACGTTCATA----CGGACAGACGGACAGA----AGGACAGACAGA----CGGACATGGC-TCAATAGTCTTCGCTTTTCATCCTGATCAAGAATATATATTCTTTATAGGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dm3 chr4:960166-960287 + TTTATACTTCCTTAGATTGAGGCGTTTATA----CGGACAGACGGGCATTCAAACCGAATTTTATG----ATAACA-----AATATCGA-----ATTCTGATTTTTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACGTAAAG------TATA--TATATTCTTAATAA-G--------------------------------------------------------------------------G---GC
droSim2 2l:22480261-22480407 + TCTATAGTTCTCGAGATCTCTACGTTCATA----CGGACAGACAGACAGACG------------GA----TGGACATTCC-CAAATCGA----------------------------ATATACTTTATATGGTCGGAAACGCTTTCTTCGGCCTGT-----ACT-------TT----------------------------------CAACGA------------------------------------------------------ATCTAGTACTTAA------C--------------------TACATTAG---------------------------------------------------------------AC----------ATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA
droSec2 scaffold_275:1880-2070 + TTTAAAGTTCCTGAGATCTCGACGTTCATA----CGGACGGAC--------------------------------TGGGT-CAGATCAACTT---TATTGATCCTGATCAAAAATATATCTACTTCATATGGTCGGAAGCGCATACTTTT---------------------------------------------------------CAATGA------------------------------------------------------ATCGAGA----GA------T--------------------ATCGTTAG---------------------------------------------------------------AT----------ATTGGA-------GAATAAAATG---------------------------------------------------------------------------------------------------------AGAAAAATTCTTTAA-------------------------------------------------------------------------------------------AATTATGGGCGTGA---------------------AAA-ATTCTTT
droYak3 3L:22632708-22632931 + TTTCTAGTTCCTGAGATCTCGACGTTCATA----CGGACAGACAGACGGAC------------AGA----CGAACATGGC-CAAATCGACTCGGCTATTGATCCTGATCAAGAATATAAATACTTTATATGGTCGGAAACGAAT----------------------------------------------------------------------------------------------------------------------------------AATA------AAAATA--------------------------AATA------------------------------------------------------ATAAAAATTATATATG---------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAAACTTTTTGCTTGCCATTTATTTTATATATATTAA-AAAG-CCTGTTTAAA-----------------------------------------TATTTCTCACTGT---G-GT---TC
droEre2 scaffold_4784:22401154-22401273 + TTTGTAGTTCCTGAGATCGAGGCGTTCATA----CGGACAGAAGGACGGACAG--------A-AGA----CGGACATGAC-CAGATATACTCGACTATTGATCCTGATCAAGAATATAAATACTTTATATGGTCGGAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
TCAATAGCGCCGAAATAGATTGCGTTCATA----CGGACAGACGGACGGACAGCAG--------GA----CGGACATTGCACAAAACCA----------------------------ATAT--------------------------------------------------------------------ACTCATTTCACT-------TTCGTG-AA-TGAGTATAAAAATCT-----------TTAGTCGGGACACTCGACAACTGA-----TATTT-------GAAT--------------------------------------------------------------------------------CTATAGTAAAAATTAACACATTTTGAACACTTATATTCATAATAAATTTTT-----------TTT-AGGACC-TTT--------------------------------------------------CGTTCATTC--AACTT-----------------------------------------------------------------------AA---------A-------------------------AAAAAAATCATCTACTTTG---------------------GGA-AT---TCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................................................................................................................TAT--------------------------------------------------------------------ACTCATTTCACT-------TTCGTG-AA-TGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................26207.1514314300000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------A-------------------------AAAAAAATCATCTACTTTG---------------------GGA-.......2411.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCATCTACTTTG---------------------GGA-AT---..1911.001100000
........................................GACGGACGGACAGCAG--------GA----CGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2230.331000001
.........................................ACGGACGGACAGCAG--------GA----CGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.331100000
............................................GACGGACAGCAG--------GA----CGGACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2050.201000010
................AGATTGCGTTCATA----CGGACAGACG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.102200000
............................................GACGGACAGCAG--------GA----CGGACG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20160.061000001
............................TA----CGGACAGACGGACGGACAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051100000
droVir3
TTTATAACTATTAAGATCT-TGCGTTCATACATACGGACGGACGGACGGACGGACGGACGCACAGACAGACGGACATGGC-TAGATTAACTTGGCTATTGATGCTGAACAAGAATATATATACTTTGTGTGGTCGGAAAAGGTTCCTTCTACCTGTTACATACATTTACATTTTGCACAAATACAATATACCATTTT-CTCCATTTTCAATGGGTTC----------------------------------------------------------------------------------AGGGTATAGAAAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAAGCT----------------------------------------------------------------------------------------------------------TCCTT-------------------------------GGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................TTCATACATACGGACGGACGGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.5010000000000000000000000000000000030000700000000000000000000000000
........................TTCATACATACGGACGGACGGACGGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.459000000000000000000000000000000000100350000000000000000000000000
............................................................................................................CAAGAATATATATACTTTGTGTGGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2590.222000000000000000000000000000100001000000000000000000000000000000
............................................................................................................CAAGAATATATATACTTTGTGTGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2490.222000000000000000000000000101000000000000000000000000000000000000
........................TTCATACATACGGACGGACG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.153000000000000000000000000300000000000000000000000000000000000000
............................................................................................................CAAGAATATATATACTTTGTGTGGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2690.111000000000000000000000000000100000000000000000000000000000000000
.............................................................................................................................................................................................................TTCAATGGGTTC----------------------------------------------------------------------------------AGGGTATAG..........................................................................................................................................................................................................................................................................................................................................................................2190.111000000000000000000000000000100000000000000000000000000000000000
..................T-TGCGTTCATACATACGGACGGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.102000000000000000000000000000000020000000000000000000000000000000
....................................................................................ATTAACTTGGCTATTGATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19120.081000000000000000000000000001000000000000000000000000000000000000
...................................................................................................................ATATATACTTTGTGTGGTCGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21130.081000000000000000000000001000000000000000000000000000000000000000
.................................................................................................................ATATATATACTTTGTGTGGTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21130.081000000000000000000000000000100000000000000000000000000000000000
..................................................................................................................TATATATACTTTGTGTGGTCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21130.081000000000000000000000001000000000000000000000000000000000000000
............................................................................................................CAAGAATATATATACTTTGTGTGGTT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26140.071000000000000000000000000100000000000000000000000000000000000000
......................................................................................................................................................ACCTGTTACATACATTTACATTTTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26150.071000000000000000000000000010000000000000000000000000000000000000
....................TGCGTTCATACATACGGACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
...........................ATACATACGGACGGACGGACG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000001000000000000000000000000000000000000000000000000000000
...........................ATACATACGGACGGACGGACGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000010000000000000000000000000000000000
................................TACGGACGGACGGACGGACGG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................ATTTTCAATGGGTTC----------------------------------------------------------------------------------AGGGT..............................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000010000000000000000000000000000000000000000
........................TTCATACATACGGACGGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000001000000000000000000000000000000
.........................TCATACATACGGACGGACGGACGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000010000000000000000000000000000000000
............................TACATACGGACGGACGGACGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000010000000000000000000000000000000000
................TCT-TGCGTTCATACATACG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000100000000000000000000000000000
........................................................................................................................................................................................................CCATTTTCAATGGGTTC----------------------------------------------------------------------------------AGGGT..............................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000000000010000000000000000000000000000
........................TTCATACATACGGACGGACGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000000000001000000000000000000000000000
.............................................................................................................................................................................................................TTCAATGGGTTC----------------------------------------------------------------------------------AGGGTAT............................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000100000000000000000000000000000000000000000000
droGri2
TTAAGGGTGTCGAGCAAAGATGCCTTCATA----CAGACGGACAGACAGCAT------------GA----CGGACATTCCACAAAACCA----------------------------ATAT--------------------------------------------------------------------ACAATGAT-ACC-------TTCGGC-ATCAGAGTATAAAAATCTAAAAAGAAA----------------------CTGG-----TATTG------ATCATA--------------------------CCCT------------------------------------------------------ATACAAATTAAAAAGA-----------------AGT----------GAACAGTTTTTTT-TATTAACT-TGTGCAAATGTTATGAGCAAGAATACTTTTGCT------------------TCGTGCATAC--AAATTGAA---A------------------------------------------------AAGTTTATTGTC-----G----------ACTGG-GAAG-----------------------------------------AATATATTATTGT-----CG---TCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
CTTATAGTCTCCGAGATCTAGGTGTTCATA----CGGACAGACGGACGGAC------------AGA----CGGACATGGC-TAGATCGACTCGGTTTTTGATCCTGATCAAGAATATATATACTTTGT-CGGTCGGAGATGCTTCCTTCTGCCTGTTACATACA-------TTTTGGCGACTTTAATATACCATTTC-ACCC------TATGGGTGT-ATGGTATAATT---------------------------------------------------------------------------------AT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATT---AAAAAACAAA------------------------------------------------------------------------------------------------------TTATTTTCGTTG----------------------CA-AA---TTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
........................................................................................................................TACTTTGT-CGGTCGGAGATGCTTCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2530.33101000
.....................................................................................................................................................................................TTTAATATACCATTTC-ACCC------T.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.15303000
..................................................C------------AGA----CGGACATGGC-TAGATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.10200200
..................TAGGTGTTCATA----CGGACAGACGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.10200020
....TAGTCTCCGAGATCTAGGTGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100001
.....................GTGTTCATA----CGGACAGACGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100100
..................................CGGACAGACGGACGGAC------------AGA----CGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100001
.................................................................................TAGATCGACTCGGTTTTTGATCCTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05100010
dp5
TTTATAGTCTTTGAGCACTAGGCGCTGATA----GGGACGGACAGACGGGCGGACGGACAGACAGA----CAGACAG-----------ACTCATT------------------------------------------------------------------------------------------------------------------TTGAGTAT-CGGGTATAATTAGTT-----------GTTGGCAGAACAAT----------------GGTA------ATAGCA--------------------------AATA------------------------------------------------------ATA----------------------------------------------------------------------------------------ACATTTTTGGTGAATTATTACAAAAATATTCGTGTATGCATAAACTGGA---A------------------------------------------------AGAGTCATTGCATATGTATTGAG---G-TTTATTCAAATTAAAACCAAAAAGAAAGAATTTCCTTCATTTTT---------------------GAC-AG---TGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................CGGACGGACAGACAGA----CAGACAG-----------ACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000020
..................................................CGGACGGACAGACAGA----CAGACAG-----------AC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25201.352700000000270
....................................................................................................................................................................................................................................................................................TA------ATAGCA--------------------------AATA------------------------------------------------------ATA----------------------------------------------------------------------------------------ACATT........................................................................................................................................................................................................2011.0010100000000
..................TAGGCGCTGATA----GGGACGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.901800000000180
..................................................CGGACGGACAGACAGA----CAGACAG-----------A.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.701400000000140
.........................TGATA----GGGACGGACAGACGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.651300000001300
......................................................CGGACAGACAGA----CAGACAG-----------AC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.551100000000110
............................TA----GGGACGGACAGACGGGCGGACGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.5010000000100
.....................................ACGGACAGACGGGCGGACGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2060.5030000000210
.TTATAGTCTTTGAGCACTAGGCGCT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.4080000026000
............................TA----GGGACGGACAGACGGGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1950.4020100100000
............................TA----GGGACGGACAGACGGGCGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2330.3310000000100
.....................................................ACGGACAGACAGA----CAGACAG-----------ACTCTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2630.3310000000010
.TTATAGTCTTTGAGCACTAGGCGCTGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.3060060000000
......................CGCTGATA----GGGACGGACAGACGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.2550000000500
...ATAGTCTTTGAGCACTAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.2550500000000
..................TAGGCGCTGATA----GGGACGGACAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.2040000000040
....................................GACGGACAGACGGGCGGACGGACAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2550.2010000000010
....................................................GACGGACAGACAGA----CAGACAG-----------AC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.2040000000040
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA---A------------------------------------------------AGAGTCATTGCATATGTATTGA..................................................................................25170.1830100011000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA---A------------------------------------------------AGAGTCATTGCATATGTAT.....................................................................................22170.1830300000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA---A------------------------------------------------AGAGTCATTGCATATGTATTG...................................................................................24170.1830200000010
....................................GACGGACAGACGGGCGGACGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2160.1710000000100
......................................CGGACAGACGGGCGGACGGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2160.1710000000001
....................................GACGGACAGACGGGCGGACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2060.1710000000100
...................AGGCGCTGATA----GGGACGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.1530000000030
...........TGAGCACTAGGCGCTGATA----GGGACGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.1530000000300
TTTATAGTCTTTGAGCACTAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.1530300000000
....................................GACGGACAGACGGGCGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1970.1410000000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA---A------------------------------------------------AGAGTCATTGCATATGTATT....................................................................................23170.1220100001000
.......................GCTGATA----GGGACGGACAGACGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1020000000020
......GTCTTTGAGCACTAGGCGCTGA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1020200000000
..................TAGGCGCTGATA----GGGACGGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.1020100000001
...................................................GGACGGACAGACAGA----CAGACAG-----------AC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.1020000000020
.TTATAGTCTTTGAGCACTAGGCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.1020000002000
........................................GACAGACGGGCGGACGGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19100.1010100000000
..............GCACTAGGCGCTGATA----GGGACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.1020200000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACAAAAATATTCGTGTATG.......................................................................................................................................................................21120.0810000001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCATATGTATTGAG---G-TTTATT......................................................................23160.0610100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA---A------------------------------------------------AGAGTCATTGCATATGTATTGAG---G-T...........................................................................28170.0610100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCATATGTATTGAG---G-TTT.........................................................................21170.0610000000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---A------------------------------------------------AGAGTCATTGCATATGTATTGAG---..............................................................................25170.0610100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA---A------------------------------------------------AGAGTCATTGCATATGTATTGAG---G-............................................................................27170.0610100000000
...........................................................................................CATT------------------------------------------------------------------------------------------------------------------TTGAGTAT-CGGGTATAATTAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................25180.0610100000000
..........................................................................................TCATT------------------------------------------------------------------------------------------------------------------TTGAGTAT-CGGGTATAATTAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................26180.0610100000000
TTTATAGTCTTTGAGCACTAGGCGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25190.0510100000000
.............................................................................................TT------------------------------------------------------------------------------------------------------------------TTGAGTAT-CGGGTATAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000010000
.............................A----GGGACGGACAGACGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16200.0510000000010
TTTATAGTCTTTGAGCACTAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
..TATAGTCTTTGAGCACTAGGCGCTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0510010000000
...................AGGCGCTGATA----GGGACGGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000001000
.................CTAGGCGCTGATA----GGGACGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000001
...................................................GGACGGACAGACAGA----CAGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000100
.....................................................ACGGACAGACAGA----CAGACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000000010
..................TAGGCGCTGATA----GGGACGGACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510000000100
.....................................................ACGGACAGACAGA----CAGACAG-----------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000000001
.............AGCACTAGGCGCTGATA----GGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000001000
droPer2
CTTATAGTCTTTGAGCATTAGGCGCTGAAG----GGGACGGACAGACGGACAGACGGACGGACGGA----CGGACACA-----CATCCACTTTT-------------------------------------------------------------------------------ACCACAAATCTAATATACCCCAAT-ACTCAT----TTTGAGTAT-CGGGTATAATA---------------------------------------------------------------------------------AC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................GACAGACGGACAGACGGACG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.153030000
CTTATAGTCTTTGAGCATTAGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051010000
....................................................GACGGACGGACGGA----CGGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000001
droAna3
TTAAAACTGAGAGACTAGTTTGCGTAGAAA----CAGACAGACGGACAGACGGACCGACGGACAGA----CGGACATGCT-CATATCGACTCAGGAGGTGATCCTGATCAAGAATATATATACTTTATAGGGTCAGAGATGTCTCCTTCACTGCGTTGCACACT-------TTTGA----------------------------------------------------------------------------------------CCAA------------AATTATAATACCCTCTGCAAGGGTATAAAAATATGC--------------------------------------------------------------------------------------------------------------TGATCGT-TTTTAACTATC--------------------------------------------------TATTCAT--------------------------------------------------------------------------------TG---------A-------------------------AATGAAATTTGGTGTTTTC---------------------AGA-AT---TCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................................................................................................................TATAGGGTCAGAGATGTCTCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.204400000
...................................................................................................................................................................T-------TTTGA----------------------------------------------------------------------------------------CCAA------------AATTATAATACCCT........................................................................................................................................................................................................................................................................................................................................................................................24200.153030000
.......TGAGAGACTAGTTTGCGTAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.102020000
..................TTTGCGTAGAAA----CAGACAGACGGACAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.102200000
..............................................CAGACGGACCGACGGACAGA----CGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.102200000
.......................................................CGACGGACAGA----CGGACATGCT-CATATC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051100000
......................................................................................................................................................CTGCGTTGCACACT-------TTTGA----------------------------------------------------------------------------------------CCAA------------AATTAT................................................................................................................................................................................................................................................................................................................................................................................................29200.051100000
.......................GTAGAAA----CAGACAGACGGACAGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051100000
......................................................CCGACGGACAGA----CGGACATG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000100
....................................................................................................................................TCAGAGATGTCTCCTTCACTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000010
droBip1
TCAAAACTGAGAGACTAGTTCGCGTAGAAA----CAGACAGACGGACAGACAGACGGACAGACAGA----CGGACATGCT-CATATCAACTCAAGAGGTGATCCTGATCAAGAATGTATATACTTTATAGGGTCGGAGATGTCTCCTTCACTGCGTTGCACACT-------TTTGA----------------------------------------------------------------------------------------CCAA------------AATTATAATACCCTCTGCAAGGGTATAAAAATAC-----CAT--------------------------------------------------------------------------------------------------------------------AA------------------------------------------------------------------------------------ATTCCTAAAATTTAT----GTAAAATTTTAATTTCTTTCT------------------AA-TGAG----A-------------------------AAAAAAATAAATAAATTCA---------------------AAA-AT---AGSizeHit CountTotal NormTotal
No Reads
droKik1
TTAAAACTGAGGGACTAGTTTGCGTAGAAA----CAGACAGACGGACAGACAGACAGACGGACAGA----CGGACATGGC-TAGATCGACTCGGCTGTTGATGCTGATCAAGAATATATATACTTTATAGGGTCGGAAACGT------------------------------------------------------------------------------------------------------------------------------------------------AATAACC--TGCAAGGGTATAAAAATCAG---------------------------------------------------------------AT----------TTTAAA-------ATACAAAATAATATTTT-----------TCT-AAGTGC-CTT--------------------------------------------------CACTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATSizeHit CountTotal NormTotal
No Reads
droFic1
AAA--ACTTATAGACAAA---ACATT----------AACCACCAAACTTTAAACG---------------------------------------------------------------------------------------------------------------------------------------------------------------TAA-CTTCTATAATA----------AAACTTTTATC----------------------------------AAAATAACTTTCGTAAA---------------------------------------------------------------------------------------TA-----------------AAT----------AATTGCTTTTTGT-TATCAAAT-TTCCAAAA-----------------------------------------------------------------------------------TATAACTGCTTTAAATTGAAACTTCTTTCT------------------AA---------A-------------------------AAAAAAATCATTTACTTCC---------------------TAA-AT---TTSizeHit CountTotal NormTotal
No Reads
droEle1
TA--------------------------------CGGACAGAAAGGCGGGCAGGCGGACGGACAGA----CGGACATAAC-TAGATCGACTCTTCTA-----GCTGATCTAGAATATAT-TACTTTATAGGGTCGGGACGG---------------------------------AA----------------------------------------------------------------------------------------CTGA------------AATTATAAT-------GCAAGTGTATAAAAATAC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACT-----------------------TTT-------------------------------------------------------------------------------------------------------------A-AA---CASizeHit CountTotal NormTotal
No Reads
droRho1
TTAAAACTGAGAGACTAGTTTGCGTAGAAA----CAGACAGACG-----A----CAGACGGACAGA----CGGACATGGC-TATATCAACTCAGGAGGTGATCCTGATCAAGAATATATATACTTTATAGGGTCGGAGATGTCTCCTTCACTGCGTTGCACACT-------TTTGA----------------------------------------------------------------------------------------CCAA------------AATTATAATACCCTCTGCAAGGGTATAAT-------------------------------------------------------------------------------------------------AACAATATATTTTT--------------C---------------------------------------------------------------------GT----------------------------------------------AAACGTTTAG------ATTAACTTTAAATTAAATAA-A--------------------------------------------------------------------------G---AASizeHit CountTotal NormTotal
No Reads
droBia1
TTAAAACTGAGAGACTAGTTTGCGCAGAAA----CGGACGGACAGACGGA----CGGACGGACAGA----CGGACAAGGC-TAGATCAACTCGTCTTGTGACGCTGATCAAGAATATATATACTTTATGGGGTCGGAAACGTCTCCTTCACTGCGTTGAAAACT-------GCTGA----------------------------------------------------------------------------------------CTGA------------AATTATTATACCCTCTGCAAGGGTATAAT-------------------------------------------------------------------------------------------------AACAATATATTTTT-----------TTTC---------------------------------------------------------------------GT----------------------------------------------AAACGTTAAG------ATTAACTTTAAATTAAATAA-A--------------------------------------------------------------------------G---AASizeHit CountTotal NormTotal
No Reads
droTak1
TTTGTAGTTTCCGAGATCTCAGCGTTCATA----CAGACAGACAGACGGACAGAC--------AGA----CGGATACTTT-TAC--------------------------------------------------------------------------------------------ACGAATACAATATACCCTTTT-ACTC------TACGAGTAA-CGGGTATAAAA---------------------------------------------------------------------------------ACCCGCCCCTATAAAGCTTTTATTTTCATTTTTTAACTTTAAACATTTTATTTTTAAGCC-------------------------------------------------------------------------------------------------------------------------------------------------AAAAGTAAAAT------------------------------------------------------------------------------------------------------TTTTTAAGTGAAAATCGCATTTTTGACTTTGGGCTAT---CGSizeHit CountTotal NormTotal
No Reads
droEug1
CTTATAGTTCCTGAGATCTCAACGTTCATA----CGGACAGACGGACAGA----AGGACAGACAGA----CGGACATGGC-TCAATAGTCTTCGCTTTTCATCCTGATCAAGAATATATATTCTTTATAGGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
TTTATACTTCCTTAGATTGAGGCGTTTATA----CGGACAGACGGGCATTCAAACCGAATTTTATG----ATAACA-----AATATCGA-----ATTCTGATTTTTATT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACGTAAAG------TATA--TATATTCTTAATAA-G--------------------------------------------------------------------------G---GCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................................................................ATATCGA-----ATTCTGATTTTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....TACTTCCTTAGATTGAGGCGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
................TTGAGGCGTTTATA----CGGACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..TATACTTCCTTAGATTGAGGCGTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................A----CGGACAGACGGGCATC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
TCTATAGTTCTCGAGATCTCTACGTTCATA----CGGACAGACAGACAGACG------------GA----TGGACATTCC-CAAATCGA----------------------------ATATACTTTATATGGTCGGAAACGCTTTCTTCGGCCTGT-----ACT-------TT----------------------------------CAACGA------------------------------------------------------ATCTAGTACTTAA------C--------------------TACATTAG---------------------------------------------------------------AC----------ATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..TATAGTTCTCGAGATCTCTACGTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2423.00600000010500000000
.....................................................................................................................................CGGAAACGCTTTCTTCGGCCTGT-----ACT-------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2622.50500000020300000000
.....................................................................................................................ATATACTTTATATGGTCGGAAACGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25202.2044000200043411011000
...........CGAGATCTCTACGTTCATA----CGGACAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2721.50300000030000000000
...........CGAGATCTCTACGTTCATA----CGGACA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2521.50300000020100000000
........................................................................................................................TACTTTATATGGTCGGAAACGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23201.0521000000210000000000
............................TA----CGGACAGACAGACAGACG------------GA----TGGACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2821.00200000010100000000
....................................................................................................................................TCGGAAACGCTTTCTTCGGCCTGT-----ACT-------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2721.00200000010100000000
............................TA----CGGACAGACAGACAGACG------------GA----TGGAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2721.00200000010100000000
...........CGAGATCTCTACGTTCATA----CGGACAGACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2921.00200000000200000000
...........CGAGATCTCTACGTTCATA----CGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2431.00300300000000000000
......................................................................................................................TATACTTTATATGGTCGGAAACGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.951900000004911040000
...................................................................................................................................................................T-------TT----------------------------------CAACGA------------------------------------------------------ATCTAGTACTT........................................................................................................................................................................................................................................................................................................................................................................................................2030.67200002000000000000
..TATAGTTCTCGAGATCTCTACGTTCATA----............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2820.50100000000000010000
....TAGTTCTCGAGATCTCTACGTTCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.50100010000000000000
..............................................CAGACG------------GA----TGGACATTCC-CAAATCGA----------------------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.50100000010000000000
............................................................................................................................TTATATGGTCGGAAACGCTTTCTTCGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.50100000010000000000
..TATAGTTCTCGAGATCTCTACGTTCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.50100000010000000000
................................................................................................................................................TCTTCGGCCTGT-----ACT-------TT----------------------------------CAACGA------------------------------------------------------A..................................................................................................................................................................................................................................................................................................................................................................................................................2420.50100100000000000000
..........TCGAGATCTCTACGTTCATA----CGGACAGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2820.50100000010000000000
............................TA----CGGACAGACAGACAGACG------------GA----TG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.50100000000000010000
....................................................................................................................................................CGGCCTGT-----ACT-------TT----------------------------------CAACGA------------------------------------------------------ATCTAG.............................................................................................................................................................................................................................................................................................................................................................................................................2520.50100000000100000000
...........CGAGATCTCTACGTTCATA----CGGACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.50100000010000000000
....................TACGTTCATA----CGGACAGACAGACAGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.50100000000100000000
................................................................................................................................................TCTTCGGCCTGT-----ACT-------TT----------------------------------CAACGA------------------------------------------------------AT.................................................................................................................................................................................................................................................................................................................................................................................................................2520.50100000010000000000
.....................................................................................TCGA----------------------------ATATACTTTATATGGTCGGAAACGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................3020.50100000010000000000
...................................GGACAGACAGACAGACG------------GA----TGGACAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.50100000000000010000
..................................................................................................................................................TTCGGCCTGT-----ACT-------TT----------------------------------CAACGA------------------------------------------------------ATCTAG.............................................................................................................................................................................................................................................................................................................................................................................................................2720.50100000010000000000
..........TCGAGATCTCTACGTTCATA----CGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.50100000000100000000
..........TCGAGATCTCTACGTTCATA----CGGACA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.50100000010000000000
.........................TCATA----CGGACAGACAGACAGACG------------GA----........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.50100000000000010000
.....................................................................................................................ATATACTTTATATGGTCGGAAACG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.45900000090000000000
.....................................................................................................................ATATACTTTATATGGTCGGAAACGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.35700000040001020000
.........................................................................................................................ACTTTATATGGTCGGAAACGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.35700000000007000000
...............................................................................................................................TATGGTCGGAAACGCTTTCTTCGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2430.33100100000000000000
.....................................................................................................................ATATACTTTATATGGTCGGAAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.30600000050100000000
........................................................................................................................TACTTTATATGGTCGGAAACGCTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.25500000000401000000
............................................................................................................................TTATATGGTCGGAAACGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.25500000000005000000
......................................................................................................................TATACTTTATATGGTCGGAAACGCTTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2750.20100000001000000000
.............................................................................................................................TATATGGTCGGAAACGCTTTCTTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24100.20200000001001000000
......................................................................................................................TATACTTTATATGGTCGGAAACGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.20400000030000010000
............................................................................................................................TTATATGGTCGGAAACGCTTTCTTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2560.17100000010000000000
........................................................................................................................TACTTTATATGGTCGGAAACGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.15300000020010000000
......................................................................................................................TATACTTTATATGGTCGGAAACGCTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.15300000030000000000
............GAGATCTCTACGTTCATA----CGGACAGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2680.13100010000000000000
........................................................................................................................TACTTTATATGGTCGGAAACG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.10200000020000000000
.....................................................................................................................ATATACTTTATATGGTCGGAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.10200000020000000000
......................................................................................................................TATACTTTATATGGTCGGAAACG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.10200000000100010000
...........................................................................................................................TTTATATGGTCGGAAACGCT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.10200000000200000000
.............................................................................................................................TATATGGTCGGAAACGCTTTCTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23110.09100000001000000000
...............................................................................................................................TATGGTCGGAAACGCTTTCTTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22160.06100000000001000000
............GAGATCTCTACGTTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15170.06100000000001000000
............................................................................................................................TTATATGGTCGGAAAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................16200.05100000000001000000
..........................................................................................................................CTTTATATGGTCGGAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17200.05100000000001000000
....................................GACAGACAGACAGACG------------GA----........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100000001000000000
.........................................................................................................................ACTTTATATGGTCGGAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100000000001000000
.....................................................................................................................ATATACTTTATATGGTCGGAAACGCTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05100000000010000000
droSec2
TTTAAAGTTCCTGAGATCTCGACGTTCATA----CGGACGGAC--------------------------------TGGGT-CAGATCAACTT---TATTGATCCTGATCAAAAATATATCTACTTCATATGGTCGGAAGCGCATACTTTT---------------------------------------------------------CAATGA------------------------------------------------------ATCGAGA----GA------T--------------------ATCGTTAG---------------------------------------------------------------AT----------ATTGGA-------GAATAAAATG---------------------------------------------------------------------------------------------------------AGAAAAATTCTTTAA-------------------------------------------------------------------------------------------AATTATGGGCGTGA---------------------AAA-ATTCTTTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........TGAGATCTCGACGTTCATA----CGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.4590090
...........TGAGATCTCGACGTTCATA----CGGACGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27190.2655000
...AAAGTTCCTGAGATCTCGACGTTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2480.2522000
....AAGTTCCTGAGATCTCGACGTTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2380.1311000
...........TGAGATCTCGACGTTCATA----CGGACG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.1022000
......GTTCCTGAGATCTCGACGTTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0511000
...........TGAGATCTCGACGTTCATA----CG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510010
...........TGAGATCTCGACGTTCATA----CGGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510001
droYak3
TTTCTAGTTCCTGAGATCTCGACGTTCATA----CGGACAGACAGACGGAC------------AGA----CGAACATGGC-CAAATCGACTCGGCTATTGATCCTGATCAAGAATATAAATACTTTATATGGTCGGAAACGAAT----------------------------------------------------------------------------------------------------------------------------------AATA------AAAATA--------------------------AATA------------------------------------------------------ATAAAAATTATATATG---------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAAACTTTTTGCTTGCCATTTATTTTATATATATTAA-AAAG-CCTGTTTAAA-----------------------------------------TATTTCTCACTGT---G-GT---TCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................TA----CGGACAGACAGACGGAC------------AGA----CGAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2730.33100100000000
.TTCTAGTTCCTGAGATCTCGACGTT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25100.30300300000000
.........CCTGAGATCTCGACGTTCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.20440000000000
........................TTCATA----CGGACAGACAGACGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.15303000000000
........................TTCATA----CGGACAGACAGACGGAC------------A..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.10202000000000
..................................................................................AAATCGACTCGGCTATTGATCCTGATCAAGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................31200.10200000000002
..........................CATA----CGGACAGACAGACGGAC------------AGA----CG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.10202000000000
....................................................................................................................TAAATACTTTATATGGTCGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20180.06101000000000
........................TTCATA----CGGACAGACAGACGGAC------------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100000010000
..............................................................................GC-CAAATCGACTCGGCTATTGATCCTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05101000000000
........TCCTGAGATCTCGACGTTCATA----CGGAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.05100100000000
........TCCTGAGATCTCGACGTTC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05101000000000
..TCTAGTTCCTGAGATCTCGACGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100100000000
droEre2
TTTGTAGTTCCTGAGATCGAGGCGTTCATA----CGGACAGAAGGACGGACAG--------A-AGA----CGGACATGAC-CAGATATACTCGACTATTGATCCTGATCAAGAATATAAATACTTTATATGGTCGGAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............AGATCGAGGCGTTCATA----CGGACA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.751500000015
............................................................................................GACTATTGATCCTGATCAAGAAT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23190.0510100000
...GTAGTTCCTGAGATCGAGGCGTTCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0511000000
TTTGTAGTTCCTGAGATCGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000010
.......TTCCTGAGATCGAGGCGTTCATA----CG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.0511000000
TTTGTAGTTCCTGAGATCGAGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0511000000

Generated: 05/18/2015 at 01:06 AM