ID:

dmo_1715

 Coordinate:

scaffold_6500:30103811-30103961 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [dmoj_GLEANR_436:1]; CDS [Dmoj\GI19424-cds]; intron [Dmoj\GI19424-in]

Repeatable elements

NameClassFamilyStrand
Homo6DNAhAT-Pegasus-

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTACTGTAAACTCGGTCATTTGCATTTGCTATTGACTGAATATTATGAAGGTAATTTTAGCTGTTAGTTAAATGTTAAATCCACAATCGATTTGGACACTACTAAATAATGTTGACATAGCGATTTGGCAATATTAAACATTATTGGAAAAATTATAATTTTTATACCCTGAACCCATTGAAAATGGGAAATCAGGGTATAATGTTTTTGTTGAAATGTATGTAACAGGCAGAAGGAGGCGTGGCAGACCC
**************************************************((((((((((.((((.(((((((((((..((.(((....((((((......))))))..))).))..)))).)))))))))))))))).)))))..................((((((((((.((((((...))))))...))))))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M060
embryo
 M046
female body
........................................................................................................................................................................................TGGGAAATCAGGGTATAA................................................. 18 0 20 0.35 7 7 0
...................................................................................................................................................................................................................................GGCAGAAGGAGGCGTGGCAGACC. 23 0 20 0.10 2 0 2
........................................................................................................................................................................................TGGGAAATCAGGGTATAATGTTTTTGT........................................ 27 0 20 0.05 1 0 1
........................................................................................................................................................................................TGGGAAATCAGGGTATAATGTTTTTG......................................... 26 0 20 0.05 1 0 1
.......................................................................................................................................................................................................................ATGTATGTAACAGGCAGAAGG............... 21 0 20 0.05 1 1 0

Anti-sense strand reads

GATGACATTTGAGCCAGTAAACGTAAACGATAACTGACTTATAATACTTCCATTAAAATCGACAATCAATTTACAATTTAGGTGTTAGCTAAACCTGTGATGATTTATTACAACTGTATCGCTAAACCGTTATAATTTGTAATAACCTTTTTAATATTAAAAATATGGGACTTGGGTAACTTTTACCCTTTAGTCCCATATTACAAAAACAACTTTACATACATTGTCCGTCTTCCTCCGCACCGTCTGGG
**************************************************((((((((((.((((.(((((((((((..((.(((....((((((......))))))..))).))..)))).)))))))))))))))).)))))..................((((((((((.((((((...))))))...))))))))))************************************************** 		Read size # Mismatch Hit Count Total Norm Total M046
female body
 V110
male body		 M060
embryo
.............................................................................TAAGCTGCTAGCTAAACCTG.......................................................................................................................................................... 20 3 7 0.14 1 0 1 0
...............................................................................AGATGTTAGCTAAACGTG.......................................................................................................................................................... 18 2 8 0.13 1 0 1 0
..............................................................................................................................................................................................................................ATTGTCCGTCTTCCTCCGCA......... 20 0 20 0.10 2 2 0 0
................................................................................................................................................................................................GTCCCATATTACAAAAACAAC...................................... 21 0 16 0.06 1 1 0 0
...............................................................................................................................................................................................AGTCCCATATTACAAAAACAAC...................................... 22 0 16 0.06 1 1 0 0
..................................................................................................................................................................................................CCCATATTACAACAACAACTTTACA................................ 25 1 20 0.05 1 0 0 1
......ATTTGAGCGAGTAAAGGCA.................................................................................................................................................................................................................................. 19 3 20 0.05 1 1 0 0
..................................................................................................................................................................................................CCCATATTACAAAAACAAATT.................................... 21 1 20 0.05 1 0 0 1
...................................................................................................................................................................................................................................CCGTCTTCCTCCGCACCGTCTGGG 24 0 20 0.05 1 1 0 0
...........................................................................................................................................................................................................CAAAAACAACTTTACATACATTGT........................ 24 0 20 0.05 1 0 0 1
......................................................................................................................GCGCCAAACCGTTATATTT.................................................................................................................. 19 3 20 0.05 1 0 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droMoj3 scaffold_6500:30103761-30104011 - dmo_1715 CTACTGTAAA--CTC-GGTCATTTGCATTTGCTATTGACTGAATAT----TA-------------------------TGAAGGTAATTTTAGCTGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTTAAAT-------G-TTAAAT------------------------------------------------------CCACA------------A--------------------------------------------TCGATTT---------------------GGACACTAC--------TAAATAATGTT---------------------------------GACATAGCGATTTGGCAAT--------------------------------------------------------ATTAAACATTATTGG-------------------------------------------------------------------------------------------------------------------------------AAAAATT-----ATAATTTTTATA--CC-CTGAACCCATTGAAAATGGGA------AATCAGGG------------TATAATGTTTTTGTTGA-------AATGTATGTAACAGGCAGAAGGAGGCGTGGCAGACCC
droVir3 scaffold_12875:10970930-10971186 + TTATTTTAAA--CTC-AGCTTGTTCCAGTAAGTATTTAATTAATGT----GA-------------------------TTCAAGTACA----------------TAT-------------------------------TGAACTCGATGTA----------------------------------------------------------------------------------------------------------------------AGATTAAT-------T-TTGACT------------------------------------------------------TGGAA------------ATAAAT--------------------------------------------AT---------------------TTATCTTAA--------TATATAATATA---------------------------------CATA--------------------------------------------------------TATACTTTTTTTG--AGTAAACAATACTTG-------------------------------------------------------------------------------------------------------------------------------CAACAGA-----ATTATAGATATATTTCCCATTAAAA-------ATGGGT-------ACAAGGG------------TATATTGAATTTGTACAAAATCCAAATGTATGTAACAGGCAGAAGGAAGCATCTCCGACCC
droGri2 scaffold_14822:684217-684441 + TCGCTATG---------ATTATTTTTAT-TGCT-----CTATATAG----TA-------------------------TAAAGATAAT------------------------T-------TAATTTAAATATT-----------A-------------------------------------------------------------------------------------------------------------GTTTTA-------------------------------------------------------------------------------------------------------------------------TTAAC--------------------------------------------------------ATT--------TAAATTAA-------------------------------------------------------------------------------------------AACCTTTTTCCAT-------------------------------------------------TCTGTAAATTTCTTTCGGATTTATTGGGC--------TATC-T--TA-----GAT---------------------------------------------A-----TTTCAATTTATTTTTATA--CC-CTGAACTCATTAAAAATGGGT------AAAAAGAG------------TATAATGGTTTTGTGCA-------AATGTATATAATATGCAGAAGGAAGC-----------
droWil2 scf2_1100000004762:2683573-2683807 - ATTTACAATA--------------------TATATTGTCAAAACAT----TA-------------------------CAAAAGT-------------------TTTT-------------------------GGCATTAAAATAAAAATAAAAATAA------------AA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGTGGTGGAAAAC---------AAAAGGTAAATTAATGGAGAATTATATTA--C-----------------------------------------------------------------------------------------AAACTTGTACTATTTTTG-------------------------------------------------AAACTTAAT-------------------------------------------------------------------------------------TAAAAATT-----ATAGTTTTTATA--CC-ATACACCCATA------GGGT-------GAAATGG------------TATATTAAAGTCGCCAA-------AATGTATGTAACAGGCAGAAGGAAGCATCTCCGACCC
dp5 2:22475724-22475947 + TTGTAT--------C-TGCCACGTTA-------------ATAATGT----CA-------------------------T-----------------------------------------------------------------------A-------AAATTAA----------------------------------------------------------------------------------------------------------------------------------------------------C-----------------TTTAAACA-------------------------------------------------------------------------------------------------------------------------CACGTACATGCATATTCAAATTCAACTTGATAACGAAACAAA-------------------------G------------------T----------------------------AAAAAC---------A-----AATA---------AA---GT-----------TGCAAATTATAAACA------------------------------------------------------------------------TTTAACG-----CACATTTTTATA--CC-CGATACTCAAA----ATGAGT-------ATTGGGG------------TATATTAGATTTGTGGTAAAAGTGGATGTGTGTAACGTCCAGAAGGAATCGTTTCCGACCC
droPer2 scaffold_2:7700353-7700615 + CTAGACAGGATTCTC-AGTCCTGAGCACATAATA-TGACTGGCTAG----TT-------------------------TTAAGGACT-----------------CTTT-------------------------GGGATTGTATCT-----A-------AAATTTAATTGAAGCCA------------------------------------------------------------------------AAT-----------------------------------------------------------------------------------------------------------------------AGAAATTGTTTGAAAGC--------------------------------------------------------GAA--------TGAGTGACACG---------------------------------GATA----------------------------------------------------------------------------------------------TGAA----------------------------TGCAAATTTAATAGGA-TAATAC---------TA-----CAG---------------------------------------------------TATTATATTATAATTATA--CC-CGATACTCAAA----ATGAGT-------ATTGGGG------------TATATTAGATTTGTGGTAAAAGTGGATGTGTGTAACGTCCAGAAGGAATCGTTTCCGACCC
droAna3 scaffold_12943:2070533-2070760 + CCAATGGAAA--ATTTTCCCATTT------------------------------------------------------------------------------------------------------------GAGATTACATTCAGATTTAAAGATA------------AG-----------------------------------------------------------------------------------TCTAG----TTGTCAGAAAA--------------------------AGTCAATTTGATTACTTATTGTATGTATTCCATATA--------------------------------------TG----TAT--GTATGT----------------------------------------------------------------ATGTTCCA---------------------------------TATA----------------------------------------------------------------------------------------------TGTA----------------------------TGTG-------------------------------------------------------------------------ACCTTGAGAAAAATATA-----GGTATATTTATA--CC-CTT-----GCA-------------------GAGGG------------TATTATAATTTTGGTCA-------AAAGTGTGCAACGCAGTGAAGGAGACCTCTCCGACCC
droBip1 scf7180000396371:1023546-1023778 + ATATTGTAGG--GT-----TGTTGGTTT------TTGAAAAAATAT----CG-------------------------TATTGATGATATTTGCTGTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAAA--------------------------ATATCAATC----------------------------GA---------------------------------------------------------------------------------------------------------------------TAAT-----------------------------------------------AT--------TCAGAAATATCACCCAAAAAAATCGATATATCGAGTATTTTCGATATTTTTTATAGTCAGCTAAATTTG-------------------------------------------------------------------------------------------------------------------------------AAAAAAG-----GTTATTTTTATA--CC-CTT-----GCA-------------------GAGGG------------TATTATAATTTTGTCCA-------AAAGTGTGCAACGCAGTGAAGGAGACATCTCCGACCC
droKik1 scf7180000302094:428-654 - CTACACCAAA--C-------ATATAA-------------TT-----------------------------------------------------------------------------------------------------------------------------------------------------------TGTGAATTTGGTTTAGATATTTTGAAAAAACACAAAAGTTGTTCATACTAAATGTTAAT------------------------T------------------------------------------------------------------------------------------------TTTAACAGC--------------------------------------------------------AGC--------TATATGATATA---------------------------------GACG----------------------------------------------------------TGCTAT-------------------------------------------------ATG-----------GCCAATTTGTTGTGGA------CATACTTGT-------GAC---------------------------------------------A-----TTTTTCTTGATTTTTATA--CC-CT--------------------------TGCAGGG------------TATTATAATTTCAGTCA-------GAAGTTTGCAACGCAGTGAAGGAGACGTTTCCGACCC
droFic1 scf7180000453086:8670-8899 + AACCTTTT------C-AGTTGAGTTCT-----------------GT-----------------------------------------------------------------------------------------ATT-----------A-------AAA-----------------------------------------------------------------------------------CTGAAT-----TTTAT----TTTTCTGA---GT-------CCTTGATTAGGAAGCTAATTTACCTTGATCGATTAACATATTGATACATTAAATGCACTGAGCTTTG------------T----TAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTCGTCTGA-----------------------------------------------------------------------------------------------------------------------------------ATAGAACTGTTAATTACTTTTTATA--CC-CT-----TGCA------GAGC-------AAAAGGG------------CATTATAATTTCAGTCA-------GAAGTTTGCAACGCAGTGAAGGAGACACCTCAGACCC
droEle1 scf7180000491008:2229050-2229285 - TGAATATTAA--AAA----------------------------------------------------------------------------------------------------------------------------------------------------------AGTTAATTTGAACAGCGAATTGTTATTTATTAATTATTTTTAGTTATTTTGAAGTAAC-----------------------------------------ATTTCAACTTTTAAT--TTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGTTT--------------TT-------TAGTTTTAATTAATTTGTCAAAAAGAATTACATCCTAAGCATATAAGTTCTAG--AATTATT-----TTGATTTTTATA--CC-CTT-----GCA-------------------GAGGG------------TATTATAATTTCAGTCA-------GAAGTTTGCAACGCAGTGAAGGAGACGTTTCCGACCC
droRho1 scf7180000780156:12661-12900 - AACCTGTA-----TT-GGTCAATTTTTTTTAAC-------ATATTG--TATA-------------------------TTGAGGCGA--TCCTTTGTTTAAAGA----ACCTTTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAATAGATCCATA------------A----TAAA---------------------------------------------------------------------------------------------------------------------------------------------------------GATTTGTTAAAAAAAATAATAAAAATATT-----------------------------------------TTAT----------------------------TTCAGATTTTATATGT-CAAT-----------------------------------------------------------------AGCACATT-----GAGCTAGTTATA--CC-CGTTACTCGTA------GAGT-------AAAAGGG------------TATATTGTATTCGTGCA-------AAAGTATGTAACAGCTAGAAGGAAGCGTTTCCGACCC
droBia1 scf7180000302377:228854-229094 + AAAGTGTAAC--TTC-GGTGTTTTTGACATGTTA------TTCTAT-A-ATA-------------------------TTGGGATTA--TC------------------------------------------------------------------------------------------------------------------------------------------------------ATAAT------------TTATATTTTTAAGA---AT-------TTTGAATTAAAA--ATAATAAAAATCGGAC------------------------------------------------------------------------------------------------------------------------------------------------AAA-----------------------------------------------TC--------TAACATATAGCTGTCAA-------------------------------------------------------AGAAATGGT----------------------------CA--------------------------------------------------GA--------------------------------GAAATAAT-----GAAATAATTATT--CC-CGTTACTCGTA------GAGTATGTACTGTGAGTG------------TGTACTAGATTCGTCAG-------AAAGTATGTAACAGGTGGAAGGAAGCATTTCCGACCC
droTak1 scf7180000415703:300669-300908 + ACTGCAAA----TT--ATTTATTTATTT-ATTA-----CTATTTAT----CA-------------------------AAATAGTAAT------------------------T-------TGATATACATATT-----------AATTAATTAAATTA------------AA-----------TAGAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTT---------------------AAAAACTTC--------TA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTAATTTATAGAGTC------CTAACTTTA-------AAC-A--------------TTAACATTAAAGGCAAAAATG----------TGGCA-----GCTATATTTATA--CC-CGTTACTCGTA------GAGT-------AAAAGGG------------TATACTAGATTCGTGCA-------AAAGTATGTAACAGCTAGAAGGAAGCGTTTCCGACCC
droEug1 scf7180000407600:75837-76090 + ACTTTGAA----C-T-GGTCACTTGCACTTGCAC-----TTGCCAG----CT-------------------------TAAAGT------------------------ATCTTTAATTCTAATTTTACATACT-----------A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATT----A-AG----TAA--GTTTATAAATTTTAACTTTGCATTGCGATGTACACCTTTTTATAAAAAGAGTCACCCAACTTAAAATTTTATTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-----CAC---------------------------------------------A-----CTCTTAACAATTTTTATA--CC-CGATACTCGTG------GTGT-------AAAAGGG------------TATATTATATTCGTTGA-------AAAGTATGTAACAAGTAGAAGGAAGCGTTTCCGACCC
dm3 chr2L:21337444-21337689 - TATTAA------CTC-TATCAACAATATTTGTTTATGTTTGTCTAT-A-ATT-------------------------AAAGG-------------------------ATATTCAAA------------------------------------------------------------------------------------------------------------------------------------------------TATAAAT------------AGAT--------------------------------------------------------------ACACAATTAATTA------------------------------------------------------------------------------------------------AATAATGAA---------------------------------AAAATAAAAAATTAACTAATTT--------------------------------------------------------AAAAAAAAATGTAAATATATTGTGGAAACAAATAGTT------------------------------------------------------------------------------------------------------TAAAATA----AATATATTATATA--TC-CAT-ATTAGT---------TT-------AAAATAAATTAG-------TTTA-AAGATTCGTTGA-------AAAGTATGTAATAAGCAGAAGGAAGCGTTT-CGACCA
droSim2 2r:14652-14888 - TGTCGA------TTC-AGTCACTTTTAATTGTAA-----TAACTAC----TA-------------------------TGAAGGTTA--CCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCACC------------TGATT-TTCA-------------------------------------------------------------AATCACTACAGATTTAAT----A-TT----TAG--GTATAAAATT------------------------------------------------------------ATAATA------------------------------------------------------------------------------------T----------------------------AAATAT---------T-----TAGGTATTCAATACTA------------------------------------------------------------------------------------------------------TAAAAAA-----TATATAATTACA--CC-CGTCTCTCGTA------GAGT-------AAAAGGGATTCGTTAAAAACAAGATAGATTCGTTGA-------AAAGTATGTAAAAGGCAGAAGGGAGCGTTTCCGACTA
droSec2 scaffold_8:3665204-3665421 - TGAAAA------CTT-TGTTATATTA-T-TTCA-----CTATTTAAG-GATA-------------------------TTAAGGTGA--TC------------------------------------------------------------------------------------------------------------------------------------------------------AGACC------------CAATATCATT------------AGAT--TCCA-------------------------------------------------------------ATTGGCTTCAGATTAAAT---------------------------------------------------------------------------------------------------------------------------------ACATATCAAATTTATTAT--------ATTG------------------T----------------------------AAATAA---------A-----AATG--------------------------------------------------------------------------------------------------------------------AAGTT-----AATTTTATTATA--CC-CGTTACTCGTA------GAGT-------AAAAGAG------------TATACTAGATTCGTTGA-------AAAGTATGTTACAGGGAGAAGGTAGCGTTTCTGACTA
droYak3 2L:5095004-5095252 - CCATTCAG---------GTTAATT-TAGTGAATATTGCATTAGCGG--GGTATTAAGAATATTACGAATACTAAACAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCGAAC-----------------TTTTAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACATAATAAAATTGA--------------------GTTAGCTCTAATT-GAATTTATTG----ACCAAATCGTTTAGCAG-----------AGTATTTATTTTGG-----------------------------------------------------------------------TTTCAAA-----AATATTGTTATA--CC-CGTTACTCGTA------GAGT-------AAAAGGG------------TATACTAGATTCGTTGA-------AAAGTATGTAACAGGCAGAAGGAAGCGTTTCCGACCA
droEre2 scaffold_4929:2065077-2065280 + TGAAATTC-----------------------------------------------------------------------------ATTTTTACAATT------------------------------------------------------------------GATTAAAGCCAATTCCCAATGGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTT---------------------GGAAACTAC--------TT-GTAAT-----------------------------------------------AC--------TAAGATATAGCAGCCGT-------------------------------------------------------------------------------------------------------------------CC-------TACTCCTCACTATTTTGTTAAA--------------------------------AAAAAAAG-----GAGCTTATTATA--CC-CGTTACTCGTA------GAGT-------AAAAGGG------------GATACTAGATTTGTTGA-------AAAGTATGTAACAGGCAGAAGCAAACGTTTCAGACCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droMoj3
CTACTGTAAA--CTC-GGTCATTTGCATTTGCTATTGACTGAATAT----TA-------------------------TGAAGGTAATTTTAGCTGTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGTTAAAT-------G-TTAAAT------------------------------------------------------CCACA------------A--------------------------------------------TCGATTT---------------------GGACACTAC--------TAAATAATGTT---------------------------------GACATAGCGATTTGGCAAT--------------------------------------------------------ATTAAACATTATTGG-------------------------------------------------------------------------------------------------------------------------------AAAAATT-----ATAATTTTTATA--CC-CTGAACCCATTGAAAATGGGA------AATCAGGG------------TATAATGTTTTTGTTGA-------AATGTATGTAACAGGCAGAAGGAGGCGTGGCAGACCCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGA------AATCAGGG------------TATAA........................................................18200.357000070
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAGAAGGAGGCGTGGCAGACC.23200.102200000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGA------AATCAGGG------------TATAATGTTTTTGT...............................................27200.051100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGA------AATCAGGG------------TATAATGTTTTTG................................................26200.051100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTATGTAACAGGCAGAAGG...............21200.051000010
droVir3
TTATTTTAAA--CTC-AGCTTGTTCCAGTAAGTATTTAATTAATGT----GA-------------------------TTCAAGTACA----------------TAT-------------------------------TGAACTCGATGTA----------------------------------------------------------------------------------------------------------------------AGATTAAT-------T-TTGACT------------------------------------------------------TGGAA------------ATAAAT--------------------------------------------AT---------------------TTATCTTAA--------TATATAATATA---------------------------------CATA--------------------------------------------------------TATACTTTTTTTG--AGTAAACAATACTTG-------------------------------------------------------------------------------------------------------------------------------CAACAGA-----ATTATAGATATATTTCCCATTAAAA-------ATGGGT-------ACAAGGG------------TATATTGAATTTGTACAAAATCCAAATGTATGTAACAGGCAGAAGGAAGCATCTCCGACCCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAAATGTATGTAACAGGCAGAAGG...............262046.30926000002300000002000000000000000000009010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAAA-------ATGGGT-------ACAAGGG------------TATATTG......................................................26201.4529002010001000000000000000185001110061010000000000000000000000000
.................................ATTTAATTAATGT----GA-------------------------TTCAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAAA-------ATGGGT-------ACAAGGG------------TATAT........................................................24200.9018001000000000000000000000031220010042020000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAAATGTATGTAACAGGC.....................20200.60120000000000000000000000000120000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAAA-------ATGGGT-------ACAAGGG------------TATATT.......................................................25200.5511000000100000000000000000252000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATGTAACAGGCAGAAGGAAGCATC........26200.204000000000000000000000000000000400000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAGGAAGCA..........23200.153000003000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAAA-------ATGGGT-------ACAAGGG------------TAT..........................................................22200.153000000000000000000000000001010000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATGTAACAGGCAGAAGGAAG............22200.153000000000000000000000000000000030000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAAA-------ATGGGT-------ACAAGGG------------TATA.........................................................23200.102000000000000000000000000101000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTATGTAACAGGCAGAAGGA..............23200.102000000000000000000000000000000000200000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTATGTAACAGGCAGAAGGAAGC...........25200.102000000000000000000000000000020000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGTATGTAACAGGCAGAAGGAAG............26200.102000000000000000000000000000002000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAAATGTATGTAACAGGCAGAAGGAAG............29200.102000200000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTATGTAACAGGCAGAAGGAA.............23200.051000000000000000000000000000000000000000000000000000000000000001
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAAA-------ATGGGT-------ACAAGG..........................................................................18200.051000000001000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTATGTAACAGGCAGA..................19200.051000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAAA-------ATGGGT-------ACAAGGG------------T............................................................20200.051000000000000000000000000000000100000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTAACAGGCAGAAGGA..............18200.051000000010000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAATGTATGTAACAGGC.....................19200.051000000000000000000000000001000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCAAATGTATGTAACAGGC.....................21200.051001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTAACAGGCAGAAGGAAGCAT.........24200.051000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGAAGGAAGCATCTCCGAC..20200.051000000000000000000000000001000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAAAA-------ATGGGT-------ACAAGGG------------TATATTC......................................................26200.051000000000000000000000000000010000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGAAGCATCTCCGACC.19200.051000001000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGGCAGAAGGAAGCATCTCC.....23200.051000000000000000000000000100000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCAGAAGGAAGCATCTCCGA...22200.051000000000000000000000000010000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTATGTAACAGGCAGAAGGAAGC...........26200.051001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAACAGGCAGAAGGAAGCATCTCCG....27200.051000000000000000000000000000000000010000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGCAGAAGGAAGCATCTCCGACC.25200.051000000000000000000000000000000000000000000000000000000000000001
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTAACAGGCAGAAGGAAGCATCTC......25200.051000000000000000000000000010000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAAAA-------ATGGGT-------ACAAGGG------------TATAT........................................................25200.051000000000000000000000000000010000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGTATGTAACAGGCAGAAGGAAGC...........27200.051000000000000000000000000000100000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGAAGGAAGCATCTCCGAC..21200.051000000000010000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATGTAACAGGCAGAAGGA..............20200.051000000010000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGTATGTAACAGGCAGAAGG...............23200.051000000000000000000001000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAAATGTATGTAACAGGCAGAAG................24200.051000000000000000000000001000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAAAA-------ATGGGT-------ACAAGGG------------T............................................................21200.051000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGGCAGAAGGAAGCATCTC......21200.051000000000000000000000000000000000010000000000000000000000000000
droGri2
TCGCTATG---------ATTATTTTTAT-TGCT-----CTATATAG----TA-------------------------TAAAGATAAT------------------------T-------TAATTTAAATATT-----------A-------------------------------------------------------------------------------------------------------------GTTTTA-------------------------------------------------------------------------------------------------------------------------TTAAC--------------------------------------------------------ATT--------TAAATTAA-------------------------------------------------------------------------------------------AACCTTTTTCCAT-------------------------------------------------TCTGTAAATTTCTTTCGGATTTATTGGGC--------TATC-T--TA-----GAT---------------------------------------------A-----TTTCAATTTATTTTTATA--CC-CTGAACTCATTAAAAATGGGT------AAAAAGAG------------TATAATGGTTTTGTGCA-------AATGTATATAATATGCAGAAGGAAGC-----------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droWil2
ATTTACAATA--------------------TATATTGTCAAAACAT----TA-------------------------CAAAAGT-------------------TTTT-------------------------GGCATTAAAATAAAAATAAAAATAA------------AA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCGTGGTGGAAAAC---------AAAAGGTAAATTAATGGAGAATTATATTA--C-----------------------------------------------------------------------------------------AAACTTGTACTATTTTTG-------------------------------------------------AAACTTAAT-------------------------------------------------------------------------------------TAAAAATT-----ATAGTTTTTATA--CC-ATACACCCATA------GGGT-------GAAATGG------------TATATTAAAGTCGCCAA-------AATGTATGTAACAGGCAGAAGGAAGCATCTCCGACCCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGTTTTTATA--CC-ATACACCCATA------GGG........................................................................................27200.05101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATA------GGGT-------GAAATGG------------TATATTAAAGT..................................................26200.05101000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACACCCATA------GGGT-------GAAATG..........................................................................21200.05101000
dp5
TTGTAT--------C-TGCCACGTTA-------------ATAATGT----CA-------------------------T-----------------------------------------------------------------------A-------AAATTAA----------------------------------------------------------------------------------------------------------------------------------------------------C-----------------TTTAAACA-------------------------------------------------------------------------------------------------------------------------CACGTACATGCATATTCAAATTCAACTTGATAACGAAACAAA-------------------------G------------------T----------------------------AAAAAC---------A-----AATA---------AA---GT-----------TGCAAATTATAAACA------------------------------------------------------------------------TTTAACG-----CACATTTTTATA--CC-CGATACTCAAA----ATGAGT-------ATTGGGG------------TATATTAGATTTGTGGTAAAAGTGGATGTGTGTAACGTCCAGAAGGAATCGTTTCCGACCCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTAAAAGTGGATGTG...............................21209.85197000000001970
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTAAAAGTGGATGTGTGT............................24203.156300000063000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTAAAAGTGGATGTGTGTAA..........................26201.002000000002000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAGATTTGTGGTAAAAGTG.....................................21200.701401400000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGGATGTGTGTAACGTC......................20200.601201200000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGTAAAAGTGGATGTGTGTAA..........................25200.4590900000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA--CC-CGATACTCAAA----ATGAGT-------ATTG............................................................................25200.4080800000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-------ATTGGGG------------TATATTAGA....................................................17200.3570000000700
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAA----ATGAGT-------ATTGGGG------------T............................................................19200.3570700000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATA--CC-CGATACTCAAA----ATGAGT-------ATTG............................................................................27200.2550500000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGTAAAAGTGGATGTGTG.............................21200.2040040000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATA--CC-CGATACTCAAA----ATG..........................................................................................19200.1530300000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGG------------TATATTAGATTTGTG..............................................20200.1530300000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAA----ATGAGT-------ATTGGGG------------TATATTAG.....................................................25200.1530000000300
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGTAAAAGTGGATGTGT..............................21200.1020000000020
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAAAGTGGATGTGTGTAACG........................21200.1020000000200
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTAAAAGTGGATGTGA..............................22200.1020000000020
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------------TATATTAGATTTGTGGTAAAAGTGG....................................26200.1020000000020
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGTAAAAGTGGATGTGTGT............................22200.1020000000200
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGTAAAAGTGGATGTGTGTA...........................24200.1020000002000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTCCAGAAGGAATCGTTTC......20200.1020200000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAAA----ATGAGT-------ATTGGGG------------TATAT........................................................24200.1020000000200
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGTAAAAGTGGATGTGTGTAACGT.......................27200.1020000000020
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATTAGATTTGTGGTAAA.........................................20200.1020000000020
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTAAAAGTGGATGTGT..............................18200.1020200000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGATTTGTGGTAAAAGTGG....................................20200.1020000000200
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGTGGATGTGTGTAACG........................18200.1020000000200
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTATA--CC-CGATACTCAAA----ATGAG........................................................................................26200.1020200000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGT-------ATTGGGG------------TATATTAGA....................................................20200.0510000001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGTAAAAGTGGATGTG...............................19200.0510000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTAACGTCCAGAAGGAATCGTTT.......25200.0510000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGGTAAAAGTGGATGTGTGTA...........................25200.0510000100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGTAAAAGTGGATGTGTGTA...........................23200.0510000100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGTAAAAGTGGATGT................................19200.0510010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGATGTGTGTAACGTCCAGAAG................24200.0510100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGTAAAAGTGGATGTG...............................20200.0510000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAAGTGGATGTGTGTAAC.........................21200.0510000000100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTAACGTCCAGAAGGAATCG..........22200.0510100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTTTATA--CC-CGATACTCAAA----ATG..........................................................................................26200.0510100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAAGTGGATGTGTGTA...........................19200.0510000000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTGTGGTAAAAGTGGATGT................................22200.0510100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGGTAAAAGTGGATGTGTGTAACGT.......................28200.0510010000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGTGGTAAAAGTGGATGTGT..............................23200.0510010000000
droPer2
CTAGACAGGATTCTC-AGTCCTGAGCACATAATA-TGACTGGCTAG----TT-------------------------TTAAGGACT-----------------CTTT-------------------------GGGATTGTATCT-----A-------AAATTTAATTGAAGCCA------------------------------------------------------------------------AAT-----------------------------------------------------------------------------------------------------------------------AGAAATTGTTTGAAAGC--------------------------------------------------------GAA--------TGAGTGACACG---------------------------------GATA----------------------------------------------------------------------------------------------TGAA----------------------------TGCAAATTTAATAGGA-TAATAC---------TA-----CAG---------------------------------------------------TATTATATTATAATTATA--CC-CGATACTCAAA----ATGAGT-------ATTGGGG------------TATATTAGATTTGTGGTAAAAGTGGATGTGTGTAACGTCCAGAAGGAATCGTTTCCGACCCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGTAACGTCCAGAAGGA..............20200.204040000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATTAGATTTGTGGTAAAAGTGGA...................................26200.153030000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGG------------TATATTAGATTTGTGGTAAA.........................................23200.102020000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTATA--CC-CGATACTCAAA----ATGA.........................................................................................25200.051010000
droAna3
CCAATGGAAA--ATTTTCCCATTT------------------------------------------------------------------------------------------------------------GAGATTACATTCAGATTTAAAGATA------------AG-----------------------------------------------------------------------------------TCTAG----TTGTCAGAAAA--------------------------AGTCAATTTGATTACTTATTGTATGTATTCCATATA--------------------------------------TG----TAT--GTATGT----------------------------------------------------------------ATGTTCCA---------------------------------TATA----------------------------------------------------------------------------------------------TGTA----------------------------TGTG-------------------------------------------------------------------------ACCTTGAGAAAAATATA-----GGTATATTTATA--CC-CTT-----GCA-------------------GAGGG------------TATTATAATTTTGGTCA-------AAAGTGTGCAACGCAGTGAAGGAGACCTCTCCGACCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCAGTGAAGGAGACCTCTCCGAC..25200.357061000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATAATTTTGGTCA-------AAAGTGTGC............................24200.153300000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGTGCAACGCAGTGAAGG...............20200.153000003
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCAGTGAAGGAGACCTCTCC.....23200.102020000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAACGCAGTGAAGGAGACC..........21200.102000110
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGTGCAACGCAGTGAAGGAGACCT.........26200.102020000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAGTGAAGGAGACCTCTCCGACC.25200.102020000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGCAACGCAGTGAAGGAG.............21200.102000200
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGTGCAACGCAGTGAAGGAGACC..........25200.102020000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGCAACGCAGTGAAGGAGACCT.........25200.102020000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTCA-------AAAGTGTGCAACGCAGTGA..................27200.102020000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAACGCAGTGAAGGAGACCTCTCC.....26200.102020000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACGCAGTGAAGGAGACCTCTCCGACC.29200.051010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCAACGCAGTGAAGGAGACCTCTCCGA...30200.051001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTCA-------AAAGTGTGCAACGCAG.....................24200.051000100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTCA-------AAAGTGTGCAACGCAGTGAA.................28200.051000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAACGCAGTGAAGGAGACCTCTCCGA...28200.051100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCAACGCAGTGAAGGAGACC..........22200.051001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCAGTGAAGGAGACCTCT.......20200.051100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGTGAAGGAGACCTCTCCGACCC25200.051000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGCAGTGAAGGAGACCT.........20200.051100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGCAGTGAAGGAGACCTCTCCG....23200.051000001
droBip1
ATATTGTAGG--GT-----TGTTGGTTT------TTGAAAAAATAT----CG-------------------------TATTGATGATATTTGCTGTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAAAAA--------------------------ATATCAATC----------------------------GA---------------------------------------------------------------------------------------------------------------------TAAT-----------------------------------------------AT--------TCAGAAATATCACCCAAAAAAATCGATATATCGAGTATTTTCGATATTTTTTATAGTCAGCTAAATTTG-------------------------------------------------------------------------------------------------------------------------------AAAAAAG-----GTTATTTTTATA--CC-CTT-----GCA-------------------GAGGG------------TATTATAATTTTGTCCA-------AAAGTGTGCAACGCAGTGAAGGAGACATCTCCGACCCSizeHit CountTotal NormTotal
No Reads
droKik1
CTACACCAAA--C-------ATATAA-------------TT-----------------------------------------------------------------------------------------------------------------------------------------------------------TGTGAATTTGGTTTAGATATTTTGAAAAAACACAAAAGTTGTTCATACTAAATGTTAAT------------------------T------------------------------------------------------------------------------------------------TTTAACAGC--------------------------------------------------------AGC--------TATATGATATA---------------------------------GACG----------------------------------------------------------TGCTAT-------------------------------------------------ATG-----------GCCAATTTGTTGTGGA------CATACTTGT-------GAC---------------------------------------------A-----TTTTTCTTGATTTTTATA--CC-CT--------------------------TGCAGGG------------TATTATAATTTCAGTCA-------GAAGTTTGCAACGCAGTGAAGGAGACGTTTCCGACCCSizeHit CountTotal NormTotal
No Reads
droFic1
AACCTTTT------C-AGTTGAGTTCT-----------------GT-----------------------------------------------------------------------------------------ATT-----------A-------AAA-----------------------------------------------------------------------------------CTGAAT-----TTTAT----TTTTCTGA---GT-------CCTTGATTAGGAAGCTAATTTACCTTGATCGATTAACATATTGATACATTAAATGCACTGAGCTTTG------------T----TAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTCGTCTGA-----------------------------------------------------------------------------------------------------------------------------------ATAGAACTGTTAATTACTTTTTATA--CC-CT-----TGCA------GAGC-------AAAAGGG------------CATTATAATTTCAGTCA-------GAAGTTTGCAACGCAGTGAAGGAGACACCTCAGACCCSizeHit CountTotal NormTotal
No Reads
droEle1
TGAATATTAA--AAA----------------------------------------------------------------------------------------------------------------------------------------------------------AGTTAATTTGAACAGCGAATTGTTATTTATTAATTATTTTTAGTTATTTTGAAGTAAC-----------------------------------------ATTTCAACTTTTAAT--TTC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGTTT--------------TT-------TAGTTTTAATTAATTTGTCAAAAAGAATTACATCCTAAGCATATAAGTTCTAG--AATTATT-----TTGATTTTTATA--CC-CTT-----GCA-------------------GAGGG------------TATTATAATTTCAGTCA-------GAAGTTTGCAACGCAGTGAAGGAGACGTTTCCGACCCSizeHit CountTotal NormTotal
No Reads
droRho1
AACCTGTA-----TT-GGTCAATTTTTTTTAAC-------ATATTG--TATA-------------------------TTGAGGCGA--TCCTTTGTTTAAAGA----ACCTTTAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATGAATAGATCCATA------------A----TAAA---------------------------------------------------------------------------------------------------------------------------------------------------------GATTTGTTAAAAAAAATAATAAAAATATT-----------------------------------------TTAT----------------------------TTCAGATTTTATATGT-CAAT-----------------------------------------------------------------AGCACATT-----GAGCTAGTTATA--CC-CGTTACTCGTA------GAGT-------AAAAGGG------------TATATTGTATTCGTGCA-------AAAGTATGTAACAGCTAGAAGGAAGCGTTTCCGACCCSizeHit CountTotal NormTotal
No Reads
droBia1
AAAGTGTAAC--TTC-GGTGTTTTTGACATGTTA------TTCTAT-A-ATA-------------------------TTGGGATTA--TC------------------------------------------------------------------------------------------------------------------------------------------------------ATAAT------------TTATATTTTTAAGA---AT-------TTTGAATTAAAA--ATAATAAAAATCGGAC------------------------------------------------------------------------------------------------------------------------------------------------AAA-----------------------------------------------TC--------TAACATATAGCTGTCAA-------------------------------------------------------AGAAATGGT----------------------------CA--------------------------------------------------GA--------------------------------GAAATAAT-----GAAATAATTATT--CC-CGTTACTCGTA------GAGTATGTACTGTGAGTG------------TGTACTAGATTCGTCAG-------AAAGTATGTAACAGGTGGAAGGAAGCATTTCCGACCCSizeHit CountTotal NormTotal
No Reads
droTak1
ACTGCAAA----TT--ATTTATTTATTT-ATTA-----CTATTTAT----CA-------------------------AAATAGTAAT------------------------T-------TGATATACATATT-----------AATTAATTAAATTA------------AA-----------TAGAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTT---------------------AAAAACTTC--------TA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTAATTTATAGAGTC------CTAACTTTA-------AAC-A--------------TTAACATTAAAGGCAAAAATG----------TGGCA-----GCTATATTTATA--CC-CGTTACTCGTA------GAGT-------AAAAGGG------------TATACTAGATTCGTGCA-------AAAGTATGTAACAGCTAGAAGGAAGCGTTTCCGACCCSizeHit CountTotal NormTotal
No Reads
droEug1
ACTTTGAA----C-T-GGTCACTTGCACTTGCAC-----TTGCCAG----CT-------------------------TAAAGT------------------------ATCTTTAATTCTAATTTTACATACT-----------A-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATT----A-AG----TAA--GTTTATAAATTTTAACTTTGCATTGCGATGTACACCTTTTTATAAAAAGAGTCACCCAACTTAAAATTTTATTC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CA-----CAC---------------------------------------------A-----CTCTTAACAATTTTTATA--CC-CGATACTCGTG------GTGT-------AAAAGGG------------TATATTATATTCGTTGA-------AAAGTATGTAACAAGTAGAAGGAAGCGTTTCCGACCCSizeHit CountTotal NormTotal
No Reads
dm3
TATTAA------CTC-TATCAACAATATTTGTTTATGTTTGTCTAT-A-ATT-------------------------AAAGG-------------------------ATATTCAAA------------------------------------------------------------------------------------------------------------------------------------------------TATAAAT------------AGAT--------------------------------------------------------------ACACAATTAATTA------------------------------------------------------------------------------------------------AATAATGAA---------------------------------AAAATAAAAAATTAACTAATTT--------------------------------------------------------AAAAAAAAATGTAAATATATTGTGGAAACAAATAGTT------------------------------------------------------------------------------------------------------TAAAATA----AATATATTATATA--TC-CAT-ATTAGT---------TT-------AAAATAAATTAG-------TTTA-AAGATTCGTTGA-------AAAGTATGTAATAAGCAGAAGGAAGCGTTT-CGACCASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTAAATATATTGTGGAAA........................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATAAGCAGAAGGAAGCGTT........2120.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGAAGCGTTT-CGACCA1920.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGTTGA-------AAAGTATGTAATA........................2280.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTGA-------AAAGTATGTAAT.........................2080.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGTTGA-------AAAGTATGTAAT.........................2180.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTTGA-------AAAGTATGTAATA........................2090.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCAGAAGGAAGCGTTT-C.....19100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGAAGGAAGCGTTT-C.....18110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGATTCGTTGA-------AAAGTATGT............................21170.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGATTCGTTGA-------AAAGTATGTAA..........................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAATAGTT------------------------------------------------------------------------------------------------------TAAAATA----AGA...........................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
droSim2
TGTCGA------TTC-AGTCACTTTTAATTGTAA-----TAACTAC----TA-------------------------TGAAGGTTA--CCT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTCACC------------TGATT-TTCA-------------------------------------------------------------AATCACTACAGATTTAAT----A-TT----TAG--GTATAAAATT------------------------------------------------------------ATAATA------------------------------------------------------------------------------------T----------------------------AAATAT---------T-----TAGGTATTCAATACTA------------------------------------------------------------------------------------------------------TAAAAAA-----TATATAATTACA--CC-CGTCTCTCGTA------GAGT-------AAAAGGGATTCGTTAAAAACAAGATAGATTCGTTGA-------AAAGTATGTAAAAGGCAGAAGGGAGCGTTTCCGACTASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTGA-------AAAGTATGTAAAAGGC.....................2466.83410001002231113000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTAAAAGGCAGAAGGGAGC...........2214.00400000000004000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------AAAGTATGTAAAAGGCAGAAGGGA.............2513.00300000000003000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTGA-------AAAGTATGTAAAAGGCA....................2551.00500000500000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA------GAGT-------AAAAGGGATTCGTTAAA...............................................................2311.00100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA------GAGT-------AAAAGGGATTCGTTAAAAAC............................................................2611.00100000000100000000
.......................TTTAATTGTAA-----TAACTAC----TA-------------------------TGAAGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-------AAAAGGGATTCGTTAAAAACAAGA........................................................2511.00100000010000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGTAAAAGGCAGAAGGG..............1911.00100000000001000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGT-------AAAAGGGATTCGTTAAAAAC............................................................2411.00100000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------AAAGTATGTAAAAGGCAGAAGGG..............2411.00100000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------AAAGTATGTAAAAGGCAGAAGG...............2370.86600010000104000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTGA-------AAAGTATGTAAAAGGCAGA..................2750.60300020000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------AAAGTATGTAAAAGGCAGAAG................2270.43300000000002010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------AAAGTATGTAAAAGGCA....................1880.38300000011001000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTGA-------AAAGTATGTAAAAGGG.....................24100.30300000010200000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------AAAGTATGTAAAAGGCAGA..................2080.25200000000002000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTTGA-------AAAGTATGTAAAAGGCAGA..................2660.17100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTTGA-------AAAGTATGTAAAAGGCAG...................2560.17100000000000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGGAGCGTTTCCGAC..1860.17100000000001000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGATTCGTTGA-------AAAGT................................1860.17101000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGATTCGTTGA-------AAAGTATGTAAA.........................24130.15200000000002000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTTGA-------AAAGTATGTAAAAGGC.....................2370.14100010000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA-------AAAGTATGTAAAAGGCAGA..................2170.14100000010000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GA-------AAAGTATGTAAAAGGCA....................1970.14100000001000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGA-------AAAGTATGTAAAAGGCAGA..................2270.14100000001000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------AAAGTATGTAAAAGG......................16160.13200000000002000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTA------GAGT-------AAAAGGGA........................................................................1780.13100000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------AAAGTATGTAAAAGGCAG...................1980.13100000000001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------AAAGTATGTAAAAGGC.....................1790.11100000000001000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTGA-------AAAGTATGTAAAAGG......................2390.11100000010000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------AAAGTATGTAAAAGGCAGAAGGT..............24110.09100000000000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGTTGA-------AAAGTATGTAAAA........................21140.07100000000001000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTTGA-------AAAGTATGTAAA.........................19200.05100000001000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGATTCGTTGA-------AAAGT................................17200.05100000001000000000
droSec2
TGAAAA------CTT-TGTTATATTA-T-TTCA-----CTATTTAAG-GATA-------------------------TTAAGGTGA--TC------------------------------------------------------------------------------------------------------------------------------------------------------AGACC------------CAATATCATT------------AGAT--TCCA-------------------------------------------------------------ATTGGCTTCAGATTAAAT---------------------------------------------------------------------------------------------------------------------------------ACATATCAAATTTATTAT--------ATTG------------------T----------------------------AAATAA---------A-----AATG--------------------------------------------------------------------------------------------------------------------AAGTT-----AATTTTATTATA--CC-CGTTACTCGTA------GAGT-------AAAAGAG------------TATACTAGATTCGTTGA-------AAAGTATGTTACAGGGAGAAGGTAGCGTTTCTGACTASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTTGA-------AAAGTATGTTACAGGGA....................2411.0010010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTTGA-------AAAGTATGTTACAGG......................2220.5011000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGAG------------TATACTAGATTCGTTG.............................................22120.0810001
droYak3
CCATTCAG---------GTTAATT-TAGTGAATATTGCATTAGCGG--GGTATTAAGAATATTACGAATACTAAACAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCGAAC-----------------TTTTAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACATAATAAAATTGA--------------------GTTAGCTCTAATT-GAATTTATTG----ACCAAATCGTTTAGCAG-----------AGTATTTATTTTGG-----------------------------------------------------------------------TTTCAAA-----AATATTGTTATA--CC-CGTTACTCGTA------GAGT-------AAAAGGG------------TATACTAGATTCGTTGA-------AAAGTATGTAACAGGCAGAAGGAAGCGTTTCCGACCASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGA-------AAAGTATGTAACAGGCAGAAGGAAGC...........29200.05100100000000
droEre2
TGAAATTC-----------------------------------------------------------------------------ATTTTTACAATT------------------------------------------------------------------GATTAAAGCCAATTCCCAATGGAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTT---------------------GGAAACTAC--------TT-GTAAT-----------------------------------------------AC--------TAAGATATAGCAGCCGT-------------------------------------------------------------------------------------------------------------------CC-------TACTCCTCACTATTTTGTTAAA--------------------------------AAAAAAAG-----GAGCTTATTATA--CC-CGTTACTCGTA------GAGT-------AAAAGGG------------GATACTAGATTTGTTGA-------AAAGTATGTAACAGGCAGAAGCAAACGTTTCAGACCASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA--CC-CGTTACTCGTA------GAGT-------AAAAGG..........................................................................25200.0511000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTAGATTTGTTGA-------AAAG.................................20200.0510000100

Generated: 05/18/2015 at 01:04 AM